Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0750220 | sp|Q9ZNU6|DET1_SOLLC | 77.281 | 537 | 104 | 4 | 23 | 556 | 2 | 523 | 0.0 | 862 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0750220 | G7K971 | 97.782 | 541 | 5 | 3 | 21 | 556 | 1 | 539 | 0.0 | 1089 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0750220 | 0.808264 | 3.373102e-50 | -8.615850e-47 |
| Msa0020630 | Msa0750220 | 0.804266 | 2.346162e-49 | -8.615850e-47 |
| Msa0030730 | Msa0750220 | 0.805141 | 1.540519e-49 | -8.615850e-47 |
| Msa0044710 | Msa0750220 | 0.811205 | 7.863635e-51 | -8.615850e-47 |
| Msa0046660 | Msa0750220 | -0.800195 | 1.615298e-48 | -8.615850e-47 |
| Msa0050720 | Msa0750220 | 0.820060 | 8.375017e-53 | -8.615850e-47 |
| Msa0050770 | Msa0750220 | 0.820818 | 5.608837e-53 | -8.615850e-47 |
| Msa0056140 | Msa0750220 | -0.824948 | 6.120075e-54 | -8.615850e-47 |
| Msa0056170 | Msa0750220 | -0.809158 | 2.172436e-50 | -8.615850e-47 |
| Msa0061310 | Msa0750220 | 0.811564 | 6.573790e-51 | -8.615850e-47 |
| Msa0061600 | Msa0750220 | -0.807185 | 5.719730e-50 | -8.615850e-47 |
| Msa0068410 | Msa0750220 | 0.801939 | 7.105756e-49 | -8.615850e-47 |
| Msa0068700 | Msa0750220 | -0.811862 | 5.660832e-51 | -8.615850e-47 |
| Msa0079770 | Msa0750220 | 0.815920 | 7.218159e-52 | -8.615850e-47 |
| Msa0084630 | Msa0750220 | 0.813921 | 2.003485e-51 | -8.615850e-47 |
| Msa0084680 | Msa0750220 | 0.839096 | 1.943157e-57 | -8.615850e-47 |
| Msa0101060 | Msa0750220 | 0.832679 | 8.235662e-56 | -8.615850e-47 |
| Msa0109490 | Msa0750220 | 0.803088 | 4.119416e-49 | -8.615850e-47 |
| Msa0605620 | Msa0750220 | 0.812057 | 5.135325e-51 | -8.615850e-47 |
| Msa0620640 | Msa0750220 | 0.810674 | 1.024727e-50 | -8.615850e-47 |
| Msa0646570 | Msa0750220 | 0.802731 | 4.881393e-49 | -8.615850e-47 |
| Msa0651400 | Msa0750220 | 0.804582 | 2.016032e-49 | -8.615850e-47 |
| Msa0657670 | Msa0750220 | 0.814132 | 1.800244e-51 | -8.615850e-47 |
| Msa0667970 | Msa0750220 | 0.803185 | 3.933168e-49 | -8.615850e-47 |
| Msa0704220 | Msa0750220 | 0.819607 | 1.062677e-52 | -8.615850e-47 |
| Msa0724050 | Msa0750220 | 0.839210 | 1.815641e-57 | -8.615850e-47 |
| Msa0729550 | Msa0750220 | 0.802818 | 4.684715e-49 | -8.615850e-47 |
| Msa0733000 | Msa0750220 | 0.801426 | 9.054739e-49 | -8.615850e-47 |
| Msa0743650 | Msa0750220 | 0.802362 | 5.815819e-49 | -8.615850e-47 |
| Msa0750220 | Msa0760890 | 0.819171 | 1.336226e-52 | -8.615850e-47 |
| Msa0750220 | Msa0763880 | 0.835255 | 1.865951e-56 | -8.615850e-47 |
| Msa0750220 | Msa0763910 | 0.809230 | 2.096822e-50 | -8.615850e-47 |
| Msa0750220 | Msa0769830 | 0.815205 | 1.041530e-51 | -8.615850e-47 |
| Msa0750220 | Msa0775260 | 0.809063 | 2.277461e-50 | -8.615850e-47 |
| Msa0750220 | Msa0780140 | 0.811900 | 5.555983e-51 | -8.615850e-47 |
| Msa0750220 | Msa0792510 | 0.801874 | 7.327784e-49 | -8.615850e-47 |
| Msa0750220 | Msa0828570 | 0.800856 | 1.184372e-48 | -8.615850e-47 |
| Msa0750220 | Msa0848360 | 0.807537 | 4.815938e-50 | -8.615850e-47 |
| Msa0750220 | Msa0848760 | 0.814638 | 1.391126e-51 | -8.615850e-47 |
| Msa0750220 | Msa0853170 | 0.804478 | 2.118955e-49 | -8.615850e-47 |
| Msa0750220 | Msa0863250 | 0.810672 | 1.025790e-50 | -8.615850e-47 |
| Msa0750220 | Msa0863770 | 0.805611 | 1.228167e-49 | -8.615850e-47 |
| Msa0750220 | Msa0909710 | 0.836724 | 7.913555e-57 | -8.615850e-47 |
| Msa0750220 | Msa0937940 | 0.817848 | 2.664864e-52 | -8.615850e-47 |
| Msa0750220 | Msa0975080 | 0.802465 | 5.537548e-49 | -8.615850e-47 |
| Msa0750220 | Msa1004210 | 0.815756 | 7.854304e-52 | -8.615850e-47 |
| Msa0750220 | Msa1018020 | -0.825613 | 4.260542e-54 | -8.615850e-47 |
| Msa0750220 | Msa1030870 | 0.804423 | 2.176044e-49 | -8.615850e-47 |
| Msa0750220 | Msa1036390 | 0.810046 | 1.400266e-50 | -8.615850e-47 |
| Msa0750220 | Msa1038320 | 0.801813 | 7.542190e-49 | -8.615850e-47 |
| Msa0750220 | Msa1046610 | 0.812737 | 3.646974e-51 | -8.615850e-47 |
| Msa0750220 | Msa1076680 | 0.810827 | 9.495556e-51 | -8.615850e-47 |
| Msa0750220 | Msa1078740 | 0.802529 | 5.372934e-49 | -8.615850e-47 |
| Msa0750220 | Msa1080460 | 0.800933 | 1.142128e-48 | -8.615850e-47 |
| Msa0750220 | Msa1102540 | 0.810243 | 1.269776e-50 | -8.615850e-47 |
| Msa0750220 | Msa1157730 | 0.832366 | 9.850211e-56 | -8.615850e-47 |
| Msa0750220 | Msa1171340 | 0.800414 | 1.457619e-48 | -8.615850e-47 |
| Msa0750220 | Msa1198450 | 0.805764 | 1.140314e-49 | -8.615850e-47 |
| Msa0750220 | Msa1210770 | 0.804455 | 2.142140e-49 | -8.615850e-47 |
| Msa0750220 | Msa1224670 | 0.801182 | 1.015941e-48 | -8.615850e-47 |
| Msa0750220 | Msa1263030 | 0.804273 | 2.338268e-49 | -8.615850e-47 |
| Msa0750220 | Msa1292730 | 0.819841 | 9.396850e-53 | -8.615850e-47 |
| Msa0750220 | Msa1305520 | 0.825391 | 4.808057e-54 | -8.615850e-47 |
| Msa0750220 | Msa1326000 | 0.801734 | 7.829984e-49 | -8.615850e-47 |
| Msa0750220 | Msa1335970 | -0.801871 | 7.338405e-49 | -8.615850e-47 |
| Msa0750220 | Msa1381130 | 0.801032 | 1.090163e-48 | -8.615850e-47 |
| Msa0750220 | Msa1388790 | -0.809813 | 1.571614e-50 | -8.615850e-47 |
| Msa0750220 | Msa1412520 | 0.808714 | 2.704483e-50 | -8.615850e-47 |
| Msa0750220 | Msa1418200 | 0.824971 | 6.045128e-54 | -8.615850e-47 |
| Msa0750220 | Msa1439120 | 0.800105 | 1.684831e-48 | -8.615850e-47 |
| Msa0750220 | Msa1440610 | 0.817631 | 2.983740e-52 | -8.615850e-47 |
| Msa0750220 | Msa1442290 | 0.811321 | 7.423529e-51 | -8.615850e-47 |
| Msa0127440 | Msa0750220 | 0.808064 | 3.721375e-50 | -8.615850e-47 |
| Msa0152370 | Msa0750220 | 0.817526 | 3.150281e-52 | -8.615850e-47 |
| Msa0159750 | Msa0750220 | 0.804951 | 1.688161e-49 | -8.615850e-47 |
| Msa0182930 | Msa0750220 | 0.813436 | 2.561755e-51 | -8.615850e-47 |
| Msa0185390 | Msa0750220 | 0.802600 | 5.194056e-49 | -8.615850e-47 |
| Msa0193760 | Msa0750220 | 0.811677 | 6.212365e-51 | -8.615850e-47 |
| Msa0197940 | Msa0750220 | -0.815937 | 7.156745e-52 | -8.615850e-47 |
| Msa0235550 | Msa0750220 | 0.801535 | 8.602240e-49 | -8.615850e-47 |
| Msa0401340 | Msa0750220 | 0.800545 | 1.370684e-48 | -8.615850e-47 |
| Msa0411520 | Msa0750220 | 0.820904 | 5.360460e-53 | -8.615850e-47 |
| Msa0431520 | Msa0750220 | 0.822867 | 1.882399e-53 | -8.615850e-47 |
| Msa0431830 | Msa0750220 | 0.809721 | 1.644679e-50 | -8.615850e-47 |
| Msa0448080 | Msa0750220 | 0.816258 | 6.068100e-52 | -8.615850e-47 |
| Msa0448120 | Msa0750220 | 0.801074 | 1.068971e-48 | -8.615850e-47 |
| Msa0462590 | Msa0750220 | 0.804799 | 1.815939e-49 | -8.615850e-47 |
| Msa0465800 | Msa0750220 | 0.816306 | 5.920111e-52 | -8.615850e-47 |
| Msa0472740 | Msa0750220 | 0.839499 | 1.528141e-57 | -8.615850e-47 |
| Msa0242260 | Msa0750220 | -0.816245 | 6.107290e-52 | -8.615850e-47 |
| Msa0265980 | Msa0750220 | -0.806612 | 7.560381e-50 | -8.615850e-47 |
| Msa0274520 | Msa0750220 | 0.802623 | 5.139633e-49 | -8.615850e-47 |
| Msa0282170 | Msa0750220 | 0.809048 | 2.293699e-50 | -8.615850e-47 |
| Msa0298940 | Msa0750220 | 0.816065 | 6.701574e-52 | -8.615850e-47 |
| Msa0298970 | Msa0750220 | 0.810484 | 1.126323e-50 | -8.615850e-47 |
| Msa0326670 | Msa0750220 | 0.804172 | 2.453989e-49 | -8.615850e-47 |
| Msa0354390 | Msa0750220 | 0.817596 | 3.038007e-52 | -8.615850e-47 |
| Msa0510960 | Msa0750220 | 0.800792 | 1.220267e-48 | -8.615850e-47 |
| Msa0524120 | Msa0750220 | 0.805636 | 1.213384e-49 | -8.615850e-47 |
| Msa0550110 | Msa0750220 | 0.811877 | 5.618098e-51 | -8.615850e-47 |
| Msa0564930 | Msa0750220 | 0.801512 | 8.693158e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0750220 | MtrunA17_Chr5g0396271 | 97.782 | 541 | 5 | 3 | 21 | 556 | 1 | 539 | 0.0 | 1089 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0750220 | AT4G10180.1 | 71.009 | 545 | 144 | 6 | 23 | 556 | 2 | 543 | 0.0 | 774 |
Find 108 sgRNAs with CRISPR-Local
Find 443 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATACACATTCTTCAAATT+AGG | 0.141498 | 5_2:-3619704 | Msa0750220:CDS |
| CAGCAGGTGCATCATGAATT+TGG | 0.148535 | 5_2:+3620007 | None:intergenic |
| TGTTAACTTGACCCATAATA+TGG | 0.162736 | 5_2:-3619778 | Msa0750220:CDS |
| ATTACGTTGATCTGATTATT+TGG | 0.209027 | 5_2:-3618146 | Msa0750220:CDS |
| CATTCATATTCCAGGGAATA+TGG | 0.217448 | 5_2:-3619337 | Msa0750220:CDS |
| TACATGGAGGGTAATCAATT+TGG | 0.221153 | 5_2:-3620051 | Msa0750220:CDS |
| AAATCACGTGCAGCCTAATA+TGG | 0.236617 | 5_2:-3619399 | Msa0750220:CDS |
| ACAAGAAGACACCCATATTA+TGG | 0.250665 | 5_2:+3619766 | None:intergenic |
| ATCAAGAGTTGATTGTTTAT+AGG | 0.268678 | 5_2:-3620224 | Msa0750220:CDS |
| TCCTTGGCAGGTGCAATTCT+TGG | 0.269789 | 5_2:-3617990 | Msa0750220:intron |
| GGTTTCTGCTGAAACTTATA+AGG | 0.275889 | 5_2:+3620247 | None:intergenic |
| TATACACATTCTTCAAATTA+GGG | 0.282871 | 5_2:-3619703 | Msa0750220:CDS |
| TTTCTCTGAGTTTGAATAGA+AGG | 0.287427 | 5_2:-3621262 | Msa0750220:CDS |
| TCGGCGATTCTATGAAAATT+TGG | 0.290527 | 5_2:-3620343 | Msa0750220:CDS |
| AAAACTTGTTCCGAAGTCTT+TGG | 0.299663 | 5_2:+3618184 | None:intergenic |
| GAGAGAGCAAAGGGCAAAAT+TGG | 0.301131 | 5_2:+3615282 | None:intergenic |
| CTTGTTGACGTTCGTGCTAT+TGG | 0.301845 | 5_2:-3619669 | Msa0750220:CDS |
| TTCCTTAAAATGAACTTGAT+TGG | 0.310912 | 5_2:+3616029 | None:intergenic |
| ATTCTTCAAATTAGGGATTC+TGG | 0.313807 | 5_2:-3619696 | Msa0750220:CDS |
| TTGTTGACGTTCGTGCTATT+GGG | 0.314509 | 5_2:-3619668 | Msa0750220:CDS |
| TGCTGTTGGAGGAGCTGTCC+AGG | 0.326769 | 5_2:-3619989 | Msa0750220:CDS |
| CTCTGTGACTGACAGCTAAA+AGG | 0.332022 | 5_2:+3616800 | None:intergenic |
| GACTTTGTTCTTGCAGCCTT+CGG | 0.339673 | 5_2:-3615250 | Msa0750220:CDS |
| ATTAAGTTTGGCAGCGTAGA+TGG | 0.349725 | 5_2:-3617950 | Msa0750220:CDS |
| CACCACTTGCTAATTAAGTT+TGG | 0.352258 | 5_2:-3617962 | Msa0750220:CDS |
| TATAAACAATCAACTCTTGA+TGG | 0.361899 | 5_2:+3620226 | None:intergenic |
| ATTGCTTTCATTCATATTCC+AGG | 0.377196 | 5_2:-3619345 | Msa0750220:CDS |
| TCAAATTTAGGTCCTGAAGC+TGG | 0.385659 | 5_2:-3615351 | Msa0750220:intron |
| CGGTTGTAAATATTCACTTT+CGG | 0.386118 | 5_2:-3615230 | Msa0750220:CDS |
| AGGTCCTGAAGCTGGGAGTA+TGG | 0.391618 | 5_2:-3615343 | Msa0750220:CDS |
| TGATTGTTTATAGGCCTAGA+TGG | 0.392331 | 5_2:-3620215 | Msa0750220:CDS |
| CTTCTTGTATGATGATCTAT+TGG | 0.394877 | 5_2:-3619751 | Msa0750220:CDS |
| AGCAGGTGCATCATGAATTT+GGG | 0.407016 | 5_2:+3620008 | None:intergenic |
| CCATCCATACTCCCAGCTTC+AGG | 0.407698 | 5_2:+3615339 | None:intergenic |
| CAAGAAGACACCCATATTAT+GGG | 0.433392 | 5_2:+3619767 | None:intergenic |
| GTTAACTTGACCCATAATAT+GGG | 0.436025 | 5_2:-3619777 | Msa0750220:CDS |
| TACTGAAGACTTTCTTATCC+AGG | 0.437734 | 5_2:+3619808 | None:intergenic |
| TATATGTTGTTTGAGCAGTT+TGG | 0.440396 | 5_2:-3617107 | Msa0750220:CDS |
| TTTCTTCATTCCATATTCCC+TGG | 0.440713 | 5_2:+3619327 | None:intergenic |
| TAAAGATTTCTTTCTTTACA+TGG | 0.446690 | 5_2:-3620067 | Msa0750220:CDS |
| AATAATAGGTAGCTAATGGC+TGG | 0.449701 | 5_2:-3622221 | None:intergenic |
| AATGGAAGATGGAGAGATCC+TGG | 0.457276 | 5_2:-3619826 | Msa0750220:CDS |
| AATCACGTGCAGCCTAATAT+GGG | 0.458268 | 5_2:-3619398 | Msa0750220:CDS |
| TTAAAATGAACTTGATTGGA+TGG | 0.458522 | 5_2:+3616033 | None:intergenic |
| TGGACTGTTTGCCACTTCTA+CGG | 0.460981 | 5_2:-3620031 | Msa0750220:CDS |
| GATCAACGTAATCTTGAAAG+TGG | 0.464835 | 5_2:+3618157 | None:intergenic |
| AATTTACGAAATGAATGGTC+TGG | 0.477507 | 5_2:+3620288 | None:intergenic |
| ATTATATTTAGAATGGAAGA+TGG | 0.478790 | 5_2:-3619837 | Msa0750220:intron |
| AGCTTATTTCTGCAGCTGAT+CGG | 0.483287 | 5_2:-3616073 | Msa0750220:CDS |
| GTTCAATAAAACTACATATG+AGG | 0.485188 | 5_2:+3615063 | None:intergenic |
| TTATATACAGCAACAAAAGC+TGG | 0.488795 | 5_2:+3617281 | None:intergenic |
| AGAACAGCTACGGAGCATAA+AGG | 0.489639 | 5_2:-3617006 | Msa0750220:CDS |
| AAAAGAGACTGGTCAAAGTA+AGG | 0.490331 | 5_2:+3616770 | None:intergenic |
| ACCTCATATATTGTGTAACT+TGG | 0.492060 | 5_2:+3620318 | None:intergenic |
| AGATGAGAAAGCACCTCAAA+AGG | 0.494033 | 5_2:+3619935 | None:intergenic |
| CAAATTTAGGTCCTGAAGCT+GGG | 0.494504 | 5_2:-3615350 | Msa0750220:intron |
| GATTTCTTTCTTTACATGGA+GGG | 0.495054 | 5_2:-3620063 | Msa0750220:CDS |
| TTTCGTAAATTCACAGAGGA+TGG | 0.495680 | 5_2:-3620276 | Msa0750220:CDS |
| CAAGAACAAAGTCTGCTGTA+TGG | 0.507135 | 5_2:+3615260 | None:intergenic |
| AGTAAACCTTATCATCAAAC+CGG | 0.511427 | 5_2:+3616747 | None:intergenic |
| TGCTGTATGGAGAGAGCAAA+GGG | 0.511611 | 5_2:+3615273 | None:intergenic |
| GCTACGGAGCATAAAGGATA+AGG | 0.511863 | 5_2:-3617000 | Msa0750220:CDS |
| CTGTGAATTTACGAAATGAA+TGG | 0.515785 | 5_2:+3620283 | None:intergenic |
| TCCTTGACGTTACATGAAAG+TGG | 0.516018 | 5_2:+3617081 | None:intergenic |
| CGTTGATCTGATTATTTGGA+AGG | 0.517396 | 5_2:-3618142 | Msa0750220:intron |
| TGTTGACGTTCGTGCTATTG+GGG | 0.519492 | 5_2:-3619667 | Msa0750220:CDS |
| ATGAATTTGGGCCGTAGAAG+TGG | 0.522935 | 5_2:+3620020 | None:intergenic |
| GCCAAGTTACACAATATATG+AGG | 0.525062 | 5_2:-3620319 | Msa0750220:CDS |
| ATTCATGATGCACCTGCTGT+TGG | 0.525370 | 5_2:-3620003 | Msa0750220:CDS |
| GCTGTTGGAGGAGCTGTCCA+GGG | 0.536533 | 5_2:-3619988 | Msa0750220:CDS |
| CATCAAACCGGAAAAGAGAC+TGG | 0.536809 | 5_2:+3616759 | None:intergenic |
| TTGCTTTCATTCATATTCCA+GGG | 0.544596 | 5_2:-3619344 | Msa0750220:CDS |
| ATTACACTAGTGCCAGGAGC+AGG | 0.546692 | 5_2:+3621173 | None:intergenic |
| GACTGGTCAAAGTAAGGAGA+AGG | 0.548689 | 5_2:+3616776 | None:intergenic |
| CATGATGCACCTGCTGTTGG+AGG | 0.551452 | 5_2:-3620000 | Msa0750220:CDS |
| ATCTTAAACTTGAGAGTGTG+TGG | 0.552855 | 5_2:+3616002 | None:intergenic |
| TGGACAGCTCCTCCAACAGC+AGG | 0.556623 | 5_2:+3619991 | None:intergenic |
| ATTTACGAAATGAATGGTCT+GGG | 0.561474 | 5_2:+3620289 | None:intergenic |
| ACCAGAGGATCCAAAGACTT+CGG | 0.562815 | 5_2:-3618194 | Msa0750220:intron |
| CCTGAAGCTGGGAGTATGGA+TGG | 0.565858 | 5_2:-3615339 | Msa0750220:CDS |
| GAAGTGATTACACTAGTGCC+AGG | 0.566048 | 5_2:+3621167 | None:intergenic |
| CAAATTTGTACTCCTGCTCC+TGG | 0.569226 | 5_2:-3621185 | Msa0750220:CDS |
| AGTTTGGCAGCGTAGATGGA+GGG | 0.569913 | 5_2:-3617946 | Msa0750220:CDS |
| CTCAAGTTTAAGATCAAACC+AGG | 0.574816 | 5_2:-3615993 | Msa0750220:intron |
| TAAGGCAAGCAATTCTTCAC+AGG | 0.575187 | 5_2:-3616982 | Msa0750220:intron |
| GTTTGGCAGCGTAGATGGAG+GGG | 0.576590 | 5_2:-3617945 | Msa0750220:intron |
| TGAAGAAACAGATGATACCT+TGG | 0.580472 | 5_2:-3619312 | Msa0750220:intron |
| GCTTGCAGGTTCATCATGCT+CGG | 0.580715 | 5_2:-3620362 | Msa0750220:intron |
| ATAATAGGTAGCTAATGGCT+GGG | 0.596145 | 5_2:-3622220 | None:intergenic |
| TTCATGCACTAGAACAGCTA+CGG | 0.600561 | 5_2:-3617016 | Msa0750220:CDS |
| TATTGGCAATTGTATCACTT+CGG | 0.606826 | 5_2:-3619734 | Msa0750220:CDS |
| AAGTTTGGCAGCGTAGATGG+AGG | 0.610453 | 5_2:-3617947 | Msa0750220:CDS |
| ACTTAATTAGCAAGTGGTGT+CGG | 0.614406 | 5_2:+3617966 | None:intergenic |
| TCAGCATTTCTTGATACCTG+AGG | 0.614999 | 5_2:+3617311 | None:intergenic |
| TGCCAAACTTAATTAGCAAG+TGG | 0.620048 | 5_2:+3617960 | None:intergenic |
| CTGACAGCTAAAAGGCAAAG+AGG | 0.622236 | 5_2:+3616808 | None:intergenic |
| AAGTGAATATTTACAACCGA+AGG | 0.632142 | 5_2:+3615234 | None:intergenic |
| ACCACTTTCATGTAACGTCA+AGG | 0.632278 | 5_2:-3617082 | Msa0750220:CDS |
| AGATTTCTTTCTTTACATGG+AGG | 0.632636 | 5_2:-3620064 | Msa0750220:CDS |
| CAATAGCACGAACGTCAACA+AGG | 0.638846 | 5_2:+3619670 | None:intergenic |
| AGTTCATTGCAAGAAGCAAG+TGG | 0.641022 | 5_2:+3620096 | None:intergenic |
| ATACAGCAACAAAAGCTGGA+TGG | 0.642705 | 5_2:+3617285 | None:intergenic |
| ATCACGTGCAGCCTAATATG+GGG | 0.650041 | 5_2:-3619397 | Msa0750220:CDS |
| CTGCTGTATGGAGAGAGCAA+AGG | 0.653571 | 5_2:+3615272 | None:intergenic |
| AAAGCAGCAATATTGCAGCT+CGG | 0.656385 | 5_2:-3621220 | Msa0750220:CDS |
| TTTCTATTGAAGGAACACCC+TGG | 0.658670 | 5_2:+3619971 | None:intergenic |
| TTCATTTCGTAAATTCACAG+AGG | 0.686497 | 5_2:-3620280 | Msa0750220:CDS |
| TTAAACTTGAGAGTGTGTGG+AGG | 0.702251 | 5_2:+3616005 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAATTAAATTTTATTTTTC+TGG | + | chr5_2:3615954-3615973 | None:intergenic | 10.0% |
| !! | CAGAAAAATAAAATTTAATT+TGG | - | chr5_2:3615952-3615971 | Msa0750220:intron | 10.0% |
| !! | AAAAAACTAAAAAAATCTAA+GGG | + | chr5_2:3616408-3616427 | None:intergenic | 10.0% |
| !! | AAGAAAAATTCAAAATATAA+AGG | + | chr5_2:3617354-3617373 | None:intergenic | 10.0% |
| !! | TAATTGAGATATGATTTATT+TGG | - | chr5_2:3615528-3615547 | Msa0750220:intron | 15.0% |
| !! | CAAAAAACTAAAAAAATCTA+AGG | + | chr5_2:3616409-3616428 | None:intergenic | 15.0% |
| !!! | TTTTGTTTATAATAGAAAAC+CGG | - | chr5_2:3616675-3616694 | Msa0750220:intron | 15.0% |
| !! | TGCAATTACAAAAATATATA+TGG | - | chr5_2:3616743-3616762 | Msa0750220:intron | 15.0% |
| !! | AGAAAAAGAAACTAATATTT+GGG | + | chr5_2:3618100-3618119 | None:intergenic | 15.0% |
| !! | AAGAAAAAGAAACTAATATT+TGG | + | chr5_2:3618101-3618120 | None:intergenic | 15.0% |
| !!! | TGTTCTTTTATCATATTAAT+AGG | - | chr5_2:3618585-3618604 | Msa0750220:intron | 15.0% |
| !!! | ATTTTCATTTTATATGCTTA+GGG | + | chr5_2:3619418-3619437 | None:intergenic | 15.0% |
| !!! | AATTTTCATTTTATATGCTT+AGG | + | chr5_2:3619419-3619438 | None:intergenic | 15.0% |
| !! | TAATGTTCCTATATAATATT+TGG | + | chr5_2:3619472-3619491 | None:intergenic | 15.0% |
| !!! | TTTTAATTTTTCTTATATCG+TGG | + | chr5_2:3620359-3620378 | None:intergenic | 15.0% |
| !! | ACGATATAAGAAAAATTAAA+AGG | - | chr5_2:3620358-3620377 | Msa0750220:intron | 15.0% |
| !!! | GTAAAAATTTCAGTTTTAAT+GGG | - | chr5_2:3620933-3620952 | Msa0750220:intron | 15.0% |
| !! | TAGATATACAATTGTTAAAA+TGG | - | chr5_2:3621799-3621818 | Msa0750220:intron | 15.0% |
| !!! | TTATTTTATGCTTCAAATTT+AGG | - | chr5_2:3621899-3621918 | Msa0750220:intron | 15.0% |
| !!! | TTATTCTTGAAATGATTTTG+AGG | + | chr5_2:3615244-3615263 | None:intergenic | 20.0% |
| !! | AGATATTGCATAATATATGT+AGG | + | chr5_2:3615375-3615394 | None:intergenic | 20.0% |
| !! | TGTCTTCTAACATTAATAAA+AGG | - | chr5_2:3615464-3615483 | Msa0750220:intron | 20.0% |
| !! | AAAGAAACAATAATAGTAGT+TGG | - | chr5_2:3615596-3615615 | Msa0750220:intron | 20.0% |
| !! | AAGAAACAATAATAGTAGTT+GGG | - | chr5_2:3615597-3615616 | Msa0750220:intron | 20.0% |
| !!! | TTTTTTCAATAGCTAAGATA+TGG | - | chr5_2:3616150-3616169 | Msa0750220:intron | 20.0% |
| !!! | GATTTTTTTAGTTTTTTGCT+TGG | - | chr5_2:3616411-3616430 | Msa0750220:intron | 20.0% |
| !! | AATTACTCAATGAACATAAA+AGG | - | chr5_2:3616646-3616665 | Msa0750220:intron | 20.0% |
| !! | TAAAGATTTCTTTCTTTACA+TGG | - | chr5_2:3617195-3617214 | Msa0750220:intron | 20.0% |
| !!! | AAAGTTATCTTTTCTATTGA+AGG | + | chr5_2:3617304-3617323 | None:intergenic | 20.0% |
| !! | AGAATAATCAGTTTATGATT+TGG | + | chr5_2:3617400-3617419 | None:intergenic | 20.0% |
| !! | TCTTCCATTCTAAATATAAT+AGG | + | chr5_2:3617425-3617444 | None:intergenic | 20.0% |
| !!! | ATTATATTTAGAATGGAAGA+TGG | - | chr5_2:3617425-3617444 | Msa0750220:intron | 20.0% |
| !! | TATACACATTCTTCAAATTA+GGG | - | chr5_2:3617559-3617578 | Msa0750220:intron | 20.0% |
| !!! | TGTAGATTTTTTAGTCAAAA+AGG | + | chr5_2:3617740-3617759 | None:intergenic | 20.0% |
| !! | AAAATCTACAATGTCATTAA+AGG | - | chr5_2:3617750-3617769 | Msa0750220:intron | 20.0% |
| !! | TGAATTTATAAAACTAACCA+AGG | + | chr5_2:3617970-3617989 | None:intergenic | 20.0% |
| !!! | TTCTTTTTCCATGTTTTATT+TGG | - | chr5_2:3618007-3618026 | Msa0750220:intron | 20.0% |
| !!! | TTTTGCAATACTATAAAAGA+AGG | - | chr5_2:3618331-3618350 | Msa0750220:intron | 20.0% |
| !!! | GTTAATTGTTATTCCTAAAT+TGG | + | chr5_2:3618390-3618409 | None:intergenic | 20.0% |
| !! | AATAAGGGAAATTATAGAAA+AGG | + | chr5_2:3618531-3618550 | None:intergenic | 20.0% |
| !! | ATTTATACAGAATGCAATAT+TGG | - | chr5_2:3618686-3618705 | Msa0750220:intron | 20.0% |
| !! | ATGTAAGAAAAGTTAAAACT+TGG | + | chr5_2:3619622-3619641 | None:intergenic | 20.0% |
| !!! | TGAAATTGTATCTTTTTATC+AGG | - | chr5_2:3620016-3620035 | Msa0750220:CDS | 20.0% |
| !!! | AGTGTTATTAAATTGTTAGT+GGG | - | chr5_2:3620682-3620701 | Msa0750220:intron | 20.0% |
| !!! | GGTAAAAATTTCAGTTTTAA+TGG | - | chr5_2:3620932-3620951 | Msa0750220:intron | 20.0% |
| !!! | TTTTAAGTACAGTTGAAAAA+TGG | - | chr5_2:3620990-3621009 | Msa0750220:intron | 20.0% |
| !! | TATGGTTTAAAAGATTACAA+AGG | + | chr5_2:3621121-3621140 | None:intergenic | 20.0% |
| !! | ATATATTTGCAATTACAACT+TGG | - | chr5_2:3621636-3621655 | Msa0750220:intron | 20.0% |
| !! | ATTTTCTATTGATGCTAGTT+AGG | + | chr5_2:3615082-3615101 | None:intergenic | 25.0% |
| ! | TTTAATGAGTTCCAATCAAT+GGG | + | chr5_2:3615310-3615329 | None:intergenic | 25.0% |
| ! | TAATATATGTAGGATAGAGT+CGG | + | chr5_2:3615365-3615384 | None:intergenic | 25.0% |
| ! | TTCAATTGAGCTAAATTCAT+AGG | - | chr5_2:3615397-3615416 | Msa0750220:intron | 25.0% |
| ! | TTGAGATATGATTTATTTGG+TGG | - | chr5_2:3615531-3615550 | Msa0750220:intron | 25.0% |
| !!! | CTTTTTTATGCCTTTATATC+TGG | + | chr5_2:3615572-3615591 | None:intergenic | 25.0% |
| !! | CAGATATAAAGGCATAAAAA+AGG | - | chr5_2:3615570-3615589 | Msa0750220:intron | 25.0% |
| ! | AGAAACAATAATAGTAGTTG+GGG | - | chr5_2:3615598-3615617 | Msa0750220:intron | 25.0% |
| !!! | TACATGTTTTGTTTTGTTTG+TGG | - | chr5_2:3615669-3615688 | Msa0750220:intron | 25.0% |
| ! | TTAATAGAAAGAATGGAGTT+TGG | + | chr5_2:3615733-3615752 | None:intergenic | 25.0% |
| ! | GGAGAAATTAATAGAAAGAA+TGG | + | chr5_2:3615740-3615759 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTTGTTCATTTTC+AGG | - | chr5_2:3615970-3615989 | Msa0750220:intron | 25.0% |
| !!! | TTGGTTTTTGTTCATTTTCA+GGG | - | chr5_2:3615971-3615990 | Msa0750220:intron | 25.0% |
| ! | CTAAGATATGGAATAGTTAA+TGG | - | chr5_2:3616162-3616181 | Msa0750220:intron | 25.0% |
| ! | AAGATATACTGGAGAATTTA+TGG | - | chr5_2:3616334-3616353 | Msa0750220:intron | 25.0% |
| !!! | TTTTTTAGTTTTTTGCTTGG+TGG | - | chr5_2:3616414-3616433 | Msa0750220:intron | 25.0% |
| ! | ACATTAGAGGTAGAAAAATA+AGG | - | chr5_2:3616476-3616495 | Msa0750220:intron | 25.0% |
| ! | CATTAGAGGTAGAAAAATAA+GGG | - | chr5_2:3616477-3616496 | Msa0750220:intron | 25.0% |
| ! | TGCTTATAATATTGATCAGA+AGG | + | chr5_2:3616560-3616579 | None:intergenic | 25.0% |
| ! | ATTCAATGAACCTAAAAAGT+GGG | + | chr5_2:3616587-3616606 | None:intergenic | 25.0% |
| ! | TATTCAATGAACCTAAAAAG+TGG | + | chr5_2:3616588-3616607 | None:intergenic | 25.0% |
| ! | GCAAAAATTATATTCGATTC+AGG | + | chr5_2:3616866-3616885 | None:intergenic | 25.0% |
| !! | GAATCGAATATAATTTTTGC+AGG | - | chr5_2:3616866-3616885 | Msa0750220:intron | 25.0% |
| ! | TATAAACAATCAACTCTTGA+TGG | + | chr5_2:3617039-3617058 | None:intergenic | 25.0% |
| !! | ATCAAGAGTTGATTGTTTAT+AGG | - | chr5_2:3617038-3617057 | Msa0750220:CDS | 25.0% |
| ! | CTCACCTATTATATTTAGAA+TGG | - | chr5_2:3617418-3617437 | Msa0750220:intron | 25.0% |
| ! | CTATACACATTCTTCAAATT+AGG | - | chr5_2:3617558-3617577 | Msa0750220:intron | 25.0% |
| ! | AAAAAAGAATTCCCCATATT+AGG | + | chr5_2:3617879-3617898 | None:intergenic | 25.0% |
| !! | AGTTTATCTTTGAAGGATAT+AGG | - | chr5_2:3618061-3618080 | Msa0750220:intron | 25.0% |
| !! | TTTTCTTTTTATCTCTGACA+TGG | - | chr5_2:3618119-3618138 | Msa0750220:intron | 25.0% |
| !!! | AGACATTCTAAAATCTGAAA+CGG | - | chr5_2:3618642-3618661 | Msa0750220:intron | 25.0% |
| ! | TATAAATTGAGATGCTTCTA+CGG | + | chr5_2:3618673-3618692 | None:intergenic | 25.0% |
| !!! | TAAACTATTTTTCACTAGGT+GGG | + | chr5_2:3618814-3618833 | None:intergenic | 25.0% |
| ! | AAAAATGCAAAGCAGTAATT+AGG | + | chr5_2:3618903-3618922 | None:intergenic | 25.0% |
| ! | AGAAACACAAAAACTAAAGA+AGG | + | chr5_2:3618928-3618947 | None:intergenic | 25.0% |
| !!! | TTGTAGTTGTGTTTGATTTT+TGG | - | chr5_2:3618951-3618970 | Msa0750220:intron | 25.0% |
| ! | ATTACGTTGATCTGATTATT+TGG | - | chr5_2:3619116-3619135 | Msa0750220:intron | 25.0% |
| ! | AAATCAAATCAATAGTGAGA+TGG | + | chr5_2:3619211-3619230 | None:intergenic | 25.0% |
| !! | TTTTGTTGCTGTATATAACA+TGG | - | chr5_2:3619986-3620005 | Msa0750220:CDS | 25.0% |
| !! | ATTTTTCTTATATCGTGGAA+AGG | + | chr5_2:3620354-3620373 | None:intergenic | 25.0% |
| ! | AAATTAAAAGGCTATGTACA+TGG | - | chr5_2:3620370-3620389 | Msa0750220:intron | 25.0% |
| ! | CACTAACAATTTAATAACAC+TGG | + | chr5_2:3620683-3620702 | None:intergenic | 25.0% |
| !! | CAGTGTTATTAAATTGTTAG+TGG | - | chr5_2:3620681-3620700 | Msa0750220:intron | 25.0% |
| ! | TATTAAATTGTTAGTGGGAT+TGG | - | chr5_2:3620687-3620706 | Msa0750220:intron | 25.0% |
| ! | ATTAAATTGTTAGTGGGATT+GGG | - | chr5_2:3620688-3620707 | Msa0750220:intron | 25.0% |
| ! | ATATTGGATTGATATGGTAA+TGG | - | chr5_2:3620882-3620901 | Msa0750220:intron | 25.0% |
| ! | TATTGGATTGATATGGTAAT+GGG | - | chr5_2:3620883-3620902 | Msa0750220:intron | 25.0% |
| ! | CCAATAAGCAAAAAATTCTA+TGG | + | chr5_2:3621139-3621158 | None:intergenic | 25.0% |
| !!! | CCATAGAATTTTTTGCTTAT+TGG | - | chr5_2:3621136-3621155 | Msa0750220:intron | 25.0% |
| ! | TTAAAATGAACTTGATTGGA+TGG | + | chr5_2:3621232-3621251 | None:intergenic | 25.0% |
| !! | ATCCAATCAAGTTCATTTTA+AGG | - | chr5_2:3621231-3621250 | Msa0750220:CDS | 25.0% |
| ! | TTCCTTAAAATGAACTTGAT+TGG | + | chr5_2:3621236-3621255 | None:intergenic | 25.0% |
| !!! | ATGTGAATTTTAACCAATCA+AGG | + | chr5_2:3621419-3621438 | None:intergenic | 25.0% |
| !! | TTGATTGGTTAAAATTCACA+TGG | - | chr5_2:3621372-3621391 | Msa0750220:intron | 25.0% |
| !! | TGATTGGTTAAAATTCACAT+GGG | - | chr5_2:3621373-3621392 | Msa0750220:intron | 25.0% |
| !! | TGATTGGTTAAAATTCACAT+GGG | + | chr5_2:3621373-3621392 | None:intergenic | 25.0% |
| !! | TTGATTGGTTAAAATTCACA+TGG | + | chr5_2:3621372-3621391 | None:intergenic | 25.0% |
| !!! | GCATTGATTAGAAAATTAAC+AGG | + | chr5_2:3621683-3621702 | None:intergenic | 25.0% |
| ! | TCAGTAAAAACAGTTTACAA+TGG | + | chr5_2:3622085-3622104 | None:intergenic | 25.0% |
| ! | GTTCAATAAAACTACATATG+AGG | + | chr5_2:3622202-3622221 | None:intergenic | 25.0% |
| ! | TTTTCAAATAGCCCATTGAT+TGG | - | chr5_2:3615296-3615315 | Msa0750220:CDS | 30.0% |
| CTTTAATGAGTTCCAATCAA+TGG | + | chr5_2:3615311-3615330 | None:intergenic | 30.0% | |
| AGAAGACAAATGAAATGACA+TGG | + | chr5_2:3615452-3615471 | None:intergenic | 30.0% | |
| TATGCCTTTATATCTGGATA+AGG | + | chr5_2:3615566-3615585 | None:intergenic | 30.0% | |
| GAAACAATAATAGTAGTTGG+GGG | - | chr5_2:3615599-3615618 | Msa0750220:intron | 30.0% | |
| AAACAATAATAGTAGTTGGG+GGG | - | chr5_2:3615600-3615619 | Msa0750220:intron | 30.0% | |
| AGTGAAAACTTGAAAAGAAG+TGG | - | chr5_2:3615694-3615713 | Msa0750220:intron | 30.0% | |
| GAAAGGAAAGAATTGAGATT+TGG | + | chr5_2:3615761-3615780 | None:intergenic | 30.0% | |
| AATCTCAATTCTTTCCTTTC+CGG | - | chr5_2:3615761-3615780 | Msa0750220:intron | 30.0% | |
| AACGTAAAAGACTGAGAAAT+TGG | + | chr5_2:3615843-3615862 | None:intergenic | 30.0% | |
| TTTCTCTGAGTTTGAATAGA+AGG | - | chr5_2:3616000-3616019 | Msa0750220:CDS | 30.0% | |
| ACTTCAGATCAACAATTAGA+TGG | - | chr5_2:3616236-3616255 | Msa0750220:intron | 30.0% | |
| GTTCTTCTTGTAAGATATAC+TGG | - | chr5_2:3616323-3616342 | Msa0750220:intron | 30.0% | |
| TATCCAATAGAGAACATTAG+AGG | - | chr5_2:3616463-3616482 | Msa0750220:intron | 30.0% | |
| !! | TATGTTTTAGATATGCAGAC+AGG | - | chr5_2:3616528-3616547 | Msa0750220:intron | 30.0% |
| CATTGAATAACTTATGCATC+TGG | - | chr5_2:3616599-3616618 | Msa0750220:intron | 30.0% | |
| TGTTTATAATAGAAAACCGG+AGG | - | chr5_2:3616678-3616697 | Msa0750220:intron | 30.0% | |
| GTTTATAATAGAAAACCGGA+GGG | - | chr5_2:3616679-3616698 | Msa0750220:intron | 30.0% | |
| ATATATATGGTGTGCTAGTT+TGG | - | chr5_2:3616756-3616775 | Msa0750220:CDS | 30.0% | |
| TTGTATTGTTCCTTTGTTGA+AGG | - | chr5_2:3616838-3616857 | Msa0750220:intron | 30.0% | |
| ACCTCATATATTGTGTAACT+TGG | + | chr5_2:3616947-3616966 | None:intergenic | 30.0% | |
| ATTTACGAAATGAATGGTCT+GGG | + | chr5_2:3616976-3616995 | None:intergenic | 30.0% | |
| AATTTACGAAATGAATGGTC+TGG | + | chr5_2:3616977-3616996 | None:intergenic | 30.0% | |
| CTGTGAATTTACGAAATGAA+TGG | + | chr5_2:3616982-3617001 | None:intergenic | 30.0% | |
| TTCATTTCGTAAATTCACAG+AGG | - | chr5_2:3616982-3617001 | Msa0750220:intron | 30.0% | |
| AGATTTCTTTCTTTACATGG+AGG | - | chr5_2:3617198-3617217 | Msa0750220:intron | 30.0% | |
| GATTTCTTTCTTTACATGGA+GGG | - | chr5_2:3617199-3617218 | Msa0750220:intron | 30.0% | |
| ! | AGATAACTTTTCACCTTTTG+AGG | - | chr5_2:3617314-3617333 | Msa0750220:CDS | 30.0% |
| ! | TTTGAGATCTTCAAAATCGA+AGG | - | chr5_2:3617374-3617393 | Msa0750220:intron | 30.0% |
| ! | TGTTAACTTGACCCATAATA+TGG | - | chr5_2:3617484-3617503 | Msa0750220:intron | 30.0% |
| ! | GTTAACTTGACCCATAATAT+GGG | - | chr5_2:3617485-3617504 | Msa0750220:intron | 30.0% |
| CTTCTTGTATGATGATCTAT+TGG | - | chr5_2:3617511-3617530 | Msa0750220:intron | 30.0% | |
| TATTGGCAATTGTATCACTT+CGG | - | chr5_2:3617528-3617547 | Msa0750220:intron | 30.0% | |
| ATTCTTCAAATTAGGGATTC+TGG | - | chr5_2:3617566-3617585 | Msa0750220:intron | 30.0% | |
| ! | TTTTCTCAATTCAAATGCTC+AGG | - | chr5_2:3617643-3617662 | Msa0750220:intron | 30.0% |
| ! | TGATTTTCTACATTGTTCTC+TGG | + | chr5_2:3617849-3617868 | None:intergenic | 30.0% |
| !!! | ATGGGGAATTCTTTTTTAAG+TGG | - | chr5_2:3617882-3617901 | Msa0750220:intron | 30.0% |
| ATTGCTTTCATTCATATTCC+AGG | - | chr5_2:3617917-3617936 | Msa0750220:intron | 30.0% | |
| TTGCTTTCATTCATATTCCA+GGG | - | chr5_2:3617918-3617937 | Msa0750220:intron | 30.0% | |
| AAACAGAGCCAAATAAAACA+TGG | + | chr5_2:3618018-3618037 | None:intergenic | 30.0% | |
| TCTTTGCTTTAACATGTTTC+AGG | - | chr5_2:3618037-3618056 | Msa0750220:intron | 30.0% | |
| TTCAGGAAGTTTATCTTTGA+AGG | - | chr5_2:3618054-3618073 | Msa0750220:intron | 30.0% | |
| ! | TTTTATACTGTCACTGCTTA+TGG | - | chr5_2:3618203-3618222 | Msa0750220:intron | 30.0% |
| ! | AAGCATACATTTTGAATGCA+TGG | - | chr5_2:3618270-3618289 | Msa0750220:intron | 30.0% |
| ! | AGCATACATTTTGAATGCAT+GGG | - | chr5_2:3618271-3618290 | Msa0750220:intron | 30.0% |
| AAGCAGTTAATCATGTTCAA+AGG | - | chr5_2:3618414-3618433 | Msa0750220:intron | 30.0% | |
| AGCAGTTAATCATGTTCAAA+GGG | - | chr5_2:3618415-3618434 | Msa0750220:intron | 30.0% | |
| GCACATTGTTTATTCAGTTA+AGG | + | chr5_2:3618465-3618484 | None:intergenic | 30.0% | |
| CAATAATGATAGACTATGTG+GGG | + | chr5_2:3618559-3618578 | None:intergenic | 30.0% | |
| CCAATAATGATAGACTATGT+GGG | + | chr5_2:3618560-3618579 | None:intergenic | 30.0% | |
| CCACATAGTCTATCATTATT+GGG | - | chr5_2:3618558-3618577 | Msa0750220:intron | 30.0% | |
| CCATACACTTATTCATGTTT+AGG | + | chr5_2:3618616-3618635 | None:intergenic | 30.0% | |
| CCTAAACATGAATAAGTGTA+TGG | - | chr5_2:3618613-3618632 | Msa0750220:intron | 30.0% | |
| ATAAATTGAGATGCTTCTAC+GGG | + | chr5_2:3618672-3618691 | None:intergenic | 30.0% | |
| !!! | CAGAATGCAATATTGGTTTT+TGG | - | chr5_2:3618693-3618712 | Msa0750220:intron | 30.0% |
| AAGTGTATTAGCCAATATAG+AGG | - | chr5_2:3618720-3618739 | Msa0750220:intron | 30.0% | |
| GAAGTCTATATGACAGTATT+AGG | + | chr5_2:3618764-3618783 | None:intergenic | 30.0% | |
| !! | AAACTATTTTTCACTAGGTG+GGG | + | chr5_2:3618813-3618832 | None:intergenic | 30.0% |
| !! | CTAAACTATTTTTCACTAGG+TGG | + | chr5_2:3618815-3618834 | None:intergenic | 30.0% |
| !! | CCACTAAACTATTTTTCACT+AGG | + | chr5_2:3618818-3618837 | None:intergenic | 30.0% |
| CCTAGTGAAAAATAGTTTAG+TGG | - | chr5_2:3618815-3618834 | Msa0750220:intron | 30.0% | |
| ! | TGAGTGTTATTATTACACCT+TGG | - | chr5_2:3618845-3618864 | Msa0750220:intron | 30.0% |
| AAAGCAGTAATTAGGAGAAA+CGG | + | chr5_2:3618895-3618914 | None:intergenic | 30.0% | |
| ! | CTTTTCAGTGTGTAAATTCA+TGG | - | chr5_2:3619020-3619039 | Msa0750220:intron | 30.0% |
| ! | GACATTTTATGCATCTTAAC+TGG | - | chr5_2:3619154-3619173 | Msa0750220:intron | 30.0% |
| TCCAAGGCCAAATATTATAT+AGG | - | chr5_2:3619462-3619481 | Msa0750220:intron | 30.0% | |
| TCCTATATAATATTTGGCCT+TGG | + | chr5_2:3619466-3619485 | None:intergenic | 30.0% | |
| ! | CTTATAACTGAAGTATCTAG+TGG | - | chr5_2:3619509-3619528 | Msa0750220:intron | 30.0% |
| ! | TCAATTGTTTTCGGTAAGTT+AGG | + | chr5_2:3619597-3619616 | None:intergenic | 30.0% |
| ! | AACTTGGCATCAATTGTTTT+CGG | + | chr5_2:3619606-3619625 | None:intergenic | 30.0% |
| GAGATTTAATTATCCGAATG+TGG | - | chr5_2:3619700-3619719 | Msa0750220:CDS | 30.0% | |
| AAGATATCTCATACCATGTT+AGG | - | chr5_2:3619754-3619773 | Msa0750220:CDS | 30.0% | |
| AGATATCTCATACCATGTTA+GGG | - | chr5_2:3619755-3619774 | Msa0750220:CDS | 30.0% | |
| TTTAAGAGTTATCCCTAACA+TGG | + | chr5_2:3619770-3619789 | None:intergenic | 30.0% | |
| ATGTTAGGGATAACTCTTAA+AGG | - | chr5_2:3619769-3619788 | Msa0750220:CDS | 30.0% | |
| ACTGGCTAAATCATATCATT+AGG | + | chr5_2:3619835-3619854 | None:intergenic | 30.0% | |
| AATCAATATGTGCTCTATTG+AGG | - | chr5_2:3619892-3619911 | Msa0750220:intron | 30.0% | |
| TTATATACAGCAACAAAAGC+TGG | + | chr5_2:3619984-3620003 | None:intergenic | 30.0% | |
| ! | TATATGTTGTTTGAGCAGTT+TGG | - | chr5_2:3620155-3620174 | Msa0750220:CDS | 30.0% |
| AGTAAACCTTATCATCAAAC+CGG | + | chr5_2:3620518-3620537 | None:intergenic | 30.0% | |
| TAGACAAGTAAACTAGTATG+TGG | + | chr5_2:3620541-3620560 | None:intergenic | 30.0% | |
| TTAAATTGTTAGTGGGATTG+GGG | - | chr5_2:3620689-3620708 | Msa0750220:intron | 30.0% | |
| ! | AAATTGAACCGAGTTTCTTT+TGG | - | chr5_2:3620815-3620834 | Msa0750220:intron | 30.0% |
| TTTCAGTATCATTGTTGCAA+AGG | + | chr5_2:3620856-3620875 | None:intergenic | 30.0% | |
| GATACTGAAAACTGGAATAT+TGG | - | chr5_2:3620866-3620885 | Msa0750220:intron | 30.0% | |
| ACTGGAATATTGGATTGATA+TGG | - | chr5_2:3620876-3620895 | Msa0750220:intron | 30.0% | |
| !! | TCAGTTTTAATGGGAAAAAG+AGG | - | chr5_2:3620942-3620961 | Msa0750220:intron | 30.0% |
| !! | CAGTTTTAATGGGAAAAAGA+GGG | - | chr5_2:3620943-3620962 | Msa0750220:intron | 30.0% |
| !! | AGTTTTAATGGGAAAAAGAG+GGG | - | chr5_2:3620944-3620963 | Msa0750220:intron | 30.0% |
| ! | TTGTCATGTTTAGAACATAG+AGG | + | chr5_2:3621490-3621509 | None:intergenic | 30.0% |
| ! | AAAAGCATATCAAAGTTGCA+TGG | + | chr5_2:3621858-3621877 | None:intergenic | 30.0% |
| AAGTGAATATTTACAACCGA+AGG | + | chr5_2:3622031-3622050 | None:intergenic | 30.0% | |
| CGGTTGTAAATATTCACTTT+CGG | - | chr5_2:3622032-3622051 | Msa0750220:intron | 30.0% | |
| !!! | ACTGTTTTTACTGAATCTAG+AGG | - | chr5_2:3622091-3622110 | Msa0750220:intron | 30.0% |
| CTCACCTTATCCAGATATAA+AGG | - | chr5_2:3615559-3615578 | Msa0750220:intron | 35.0% | |
| TAGCAACTACAGTAGTAAGT+TGG | - | chr5_2:3615630-3615649 | Msa0750220:intron | 35.0% | |
| ATTGGTTGCAGAGATATTAC+CGG | + | chr5_2:3615825-3615844 | None:intergenic | 35.0% | |
| !! | CATGTCATAAGCTGTTTTGT+AGG | - | chr5_2:3616382-3616401 | Msa0750220:intron | 35.0% |
| !!! | AGTTTTTTGCTTGGTGGTAT+CGG | - | chr5_2:3616420-3616439 | Msa0750220:intron | 35.0% |
| CTACCTCTAATGTTCTCTAT+TGG | + | chr5_2:3616469-3616488 | None:intergenic | 35.0% | |
| GGTAGAAAAATAAGGGTAAG+TGG | - | chr5_2:3616484-3616503 | Msa0750220:intron | 35.0% | |
| !!! | TAAGCAAACACCCACTTTTT+AGG | - | chr5_2:3616574-3616593 | Msa0750220:intron | 35.0% |
| ACACTATTTAATACACCCTC+CGG | + | chr5_2:3616697-3616716 | None:intergenic | 35.0% | |
| AGGGTGTATTAAATAGTGTC+AGG | - | chr5_2:3616698-3616717 | Msa0750220:intron | 35.0% | |
| ! | TTGGAAAATTTGCTTGCACA+TGG | - | chr5_2:3616775-3616794 | Msa0750220:CDS | 35.0% |
| AGGTGTAATTTAATGCTTGC+AGG | - | chr5_2:3616886-3616905 | Msa0750220:intron | 35.0% | |
| TCGGCGATTCTATGAAAATT+TGG | - | chr5_2:3616919-3616938 | Msa0750220:intron | 35.0% | |
| GCCAAGTTACACAATATATG+AGG | - | chr5_2:3616943-3616962 | Msa0750220:intron | 35.0% | |
| TTTCGTAAATTCACAGAGGA+TGG | - | chr5_2:3616986-3617005 | Msa0750220:CDS | 35.0% | |
| GGTTTCTGCTGAAACTTATA+AGG | + | chr5_2:3617018-3617037 | None:intergenic | 35.0% | |
| TGATTGTTTATAGGCCTAGA+TGG | - | chr5_2:3617047-3617066 | Msa0750220:CDS | 35.0% | |
| CATGAAAAAGAAAGCCATCT+AGG | + | chr5_2:3617064-3617083 | None:intergenic | 35.0% | |
| !! | TCGAATCTTCTTGCTTTTGA+CGG | + | chr5_2:3617118-3617137 | None:intergenic | 35.0% |
| TACATGGAGGGTAATCAATT+TGG | - | chr5_2:3617211-3617230 | Msa0750220:intron | 35.0% | |
| TACTGAAGACTTTCTTATCC+AGG | + | chr5_2:3617457-3617476 | None:intergenic | 35.0% | |
| CAAGAAGACACCCATATTAT+GGG | + | chr5_2:3617498-3617517 | None:intergenic | 35.0% | |
| ACAAGAAGACACCCATATTA+TGG | + | chr5_2:3617499-3617518 | None:intergenic | 35.0% | |
| CTTGTTGAGTATTCCATTAG+AGG | - | chr5_2:3617704-3617723 | Msa0750220:intron | 35.0% | |
| TATTCCATTAGAGGAGTTGT+TGG | - | chr5_2:3617713-3617732 | Msa0750220:intron | 35.0% | |
| ATTCCATTAGAGGAGTTGTT+GGG | - | chr5_2:3617714-3617733 | Msa0750220:intron | 35.0% | |
| ! | AAAGACAATCATTTGCTGAC+AGG | - | chr5_2:3617785-3617804 | Msa0750220:intron | 35.0% |
| ! | AAGACAATCATTTGCTGACA+GGG | - | chr5_2:3617786-3617805 | Msa0750220:intron | 35.0% |
| TGACAAAAATAAACAGCAGC+AGG | - | chr5_2:3617821-3617840 | Msa0750220:intron | 35.0% | |
| CATTCATATTCCAGGGAATA+TGG | - | chr5_2:3617925-3617944 | Msa0750220:intron | 35.0% | |
| TTTCTTCATTCCATATTCCC+TGG | + | chr5_2:3617938-3617957 | None:intergenic | 35.0% | |
| TGAAGAAACAGATGATACCT+TGG | - | chr5_2:3617950-3617969 | Msa0750220:CDS | 35.0% | |
| !! | AATTTGCTGTGGAGAACAAT+AGG | + | chr5_2:3618164-3618183 | None:intergenic | 35.0% |
| !! | GATCTCAAAACAATTTGCTG+TGG | + | chr5_2:3618175-3618194 | None:intergenic | 35.0% |
| AGCAGTGACAGTATAAAACA+GGG | + | chr5_2:3618201-3618220 | None:intergenic | 35.0% | |
| AAGCAGTGACAGTATAAAAC+AGG | + | chr5_2:3618202-3618221 | None:intergenic | 35.0% | |
| TGCTTGTGGAGAAAGAAATA+TGG | + | chr5_2:3618255-3618274 | None:intergenic | 35.0% | |
| GCATTCAAAATGTATGCTTG+TGG | + | chr5_2:3618269-3618288 | None:intergenic | 35.0% | |
| ACTAGAGATGCTTCCAATTT+AGG | - | chr5_2:3618374-3618393 | Msa0750220:intron | 35.0% | |
| AGTTAATCATGTTCAAAGGG+TGG | - | chr5_2:3618418-3618437 | Msa0750220:intron | 35.0% | |
| CCCACATAGTCTATCATTAT+TGG | - | chr5_2:3618557-3618576 | Msa0750220:intron | 35.0% | |
| CCCAATAATGATAGACTATG+TGG | + | chr5_2:3618561-3618580 | None:intergenic | 35.0% | |
| CAGATCATTTGCCTCTATAT+TGG | + | chr5_2:3618734-3618753 | None:intergenic | 35.0% | |
| AAACAATTGACAACGTACCA+AGG | + | chr5_2:3618865-3618884 | None:intergenic | 35.0% | |
| ! | AAAACTTGTTCCGAAGTCTT+TGG | + | chr5_2:3619081-3619100 | None:intergenic | 35.0% |
| GATCAACGTAATCTTGAAAG+TGG | + | chr5_2:3619108-3619127 | None:intergenic | 35.0% | |
| CGTTGATCTGATTATTTGGA+AGG | - | chr5_2:3619120-3619139 | Msa0750220:intron | 35.0% | |
| GATCTGATTATTTGGAAGGT+AGG | - | chr5_2:3619124-3619143 | Msa0750220:intron | 35.0% | |
| !! | GGTCTTGTTTGATGATAAAG+CGG | + | chr5_2:3619190-3619209 | None:intergenic | 35.0% |
| ACTTAATTAGCAAGTGGTGT+CGG | + | chr5_2:3619299-3619318 | None:intergenic | 35.0% | |
| ! | CACCACTTGCTAATTAAGTT+TGG | - | chr5_2:3619300-3619319 | Msa0750220:intron | 35.0% |
| TGCCAAACTTAATTAGCAAG+TGG | + | chr5_2:3619305-3619324 | None:intergenic | 35.0% | |
| ATTATCCGAATGTGGTAACA+AGG | - | chr5_2:3619708-3619727 | Msa0750220:CDS | 35.0% | |
| TTATCCGAATGTGGTAACAA+GGG | - | chr5_2:3619709-3619728 | Msa0750220:CDS | 35.0% | |
| AAAGGCTTACAACTGTTAAG+TGG | - | chr5_2:3619787-3619806 | Msa0750220:CDS | 35.0% | |
| TATGATTTAGCCAGTAACAG+TGG | - | chr5_2:3619840-3619859 | Msa0750220:intron | 35.0% | |
| ATGATTTAGCCAGTAACAGT+GGG | - | chr5_2:3619841-3619860 | Msa0750220:intron | 35.0% | |
| ! | GCTCAACATGTTAACTTGAA+TGG | - | chr5_2:3619869-3619888 | Msa0750220:intron | 35.0% |
| !!! | TATTCATGTTTTGAAGCCTC+AGG | - | chr5_2:3619935-3619954 | Msa0750220:intron | 35.0% |
| ATTCTGGCAGAATGTAAAGA+CGG | + | chr5_2:3620120-3620139 | None:intergenic | 35.0% | |
| TTCTTATATCGTGGAAAGGA+AGG | + | chr5_2:3620350-3620369 | None:intergenic | 35.0% | |
| ! | AAAAGAGACTGGTCAAAGTA+AGG | + | chr5_2:3620495-3620514 | None:intergenic | 35.0% |
| !! | TCTTTTCCGGTTTGATGATA+AGG | - | chr5_2:3620509-3620528 | Msa0750220:intron | 35.0% |
| TAAAAACTCTGATCGTTGCA+AGG | + | chr5_2:3620568-3620587 | None:intergenic | 35.0% | |
| TAAGCAGTTTATGCCTAACT+TGG | + | chr5_2:3620633-3620652 | None:intergenic | 35.0% | |
| TAGGCATAAACTGCTTAAAG+TGG | - | chr5_2:3620636-3620655 | Msa0750220:intron | 35.0% | |
| ! | GTCTCTAAAGGATGTCTAAT+TGG | + | chr5_2:3620724-3620743 | None:intergenic | 35.0% |
| ! | ATTAGACATCCTTTAGAGAC+AGG | - | chr5_2:3620724-3620743 | Msa0750220:intron | 35.0% |
| TCATGATACCTCAAGCAATA+AGG | + | chr5_2:3620757-3620776 | None:intergenic | 35.0% | |
| !! | TGTTGTGGTTTTTAGATAGC+TGG | - | chr5_2:3620787-3620806 | Msa0750220:intron | 35.0% |
| GCAACAATGATACTGAAAAC+TGG | - | chr5_2:3620858-3620877 | Msa0750220:intron | 35.0% | |
| !! | TCTCTAGTTTGCTTAACTTC+AGG | - | chr5_2:3621016-3621035 | Msa0750220:intron | 35.0% |
| ! | ATCTTAAACTTGAGAGTGTG+TGG | + | chr5_2:3621263-3621282 | None:intergenic | 35.0% |
| ! | CTCAAGTTTAAGATCAAACC+AGG | - | chr5_2:3621269-3621288 | Msa0750220:CDS | 35.0% |
| CATAATCAGCTTGAACAACA+GGG | + | chr5_2:3621307-3621326 | None:intergenic | 35.0% | |
| ACATAATCAGCTTGAACAAC+AGG | + | chr5_2:3621308-3621327 | None:intergenic | 35.0% | |
| ATGTAGTCCACTTTCTAATG+TGG | - | chr5_2:3621520-3621539 | Msa0750220:intron | 35.0% | |
| ! | ATCAAAGTTGCATGGATTAC+TGG | + | chr5_2:3621850-3621869 | None:intergenic | 35.0% |
| ! | CAACTACAGTAGTAAGTTGG+TGG | - | chr5_2:3615633-3615652 | Msa0750220:intron | 40.0% |
| AAAGCAGCAATATTGCAGCT+CGG | - | chr5_2:3616042-3616061 | Msa0750220:CDS | 40.0% | |
| !!! | GTTTTTTGCTTGGTGGTATC+GGG | - | chr5_2:3616421-3616440 | Msa0750220:intron | 40.0% |
| ! | GATTCAGGTTCCTTCAACAA+AGG | + | chr5_2:3616851-3616870 | None:intergenic | 40.0% |
| AGTTCATTGCAAGAAGCAAG+TGG | + | chr5_2:3617169-3617188 | None:intergenic | 40.0% | |
| AGCAGGTGCATCATGAATTT+GGG | + | chr5_2:3617257-3617276 | None:intergenic | 40.0% | |
| TTTCTATTGAAGGAACACCC+TGG | + | chr5_2:3617294-3617313 | None:intergenic | 40.0% | |
| !! | AGATGAGAAAGCACCTCAAA+AGG | + | chr5_2:3617330-3617349 | None:intergenic | 40.0% |
| ! | TTGTTGACGTTCGTGCTATT+GGG | - | chr5_2:3617594-3617613 | Msa0750220:intron | 40.0% |
| CTCAATTCAAATGCTCAGGT+TGG | - | chr5_2:3617647-3617666 | Msa0750220:intron | 40.0% | |
| AAATCACGTGCAGCCTAATA+TGG | - | chr5_2:3617863-3617882 | Msa0750220:intron | 40.0% | |
| AATCACGTGCAGCCTAATAT+GGG | - | chr5_2:3617864-3617883 | Msa0750220:intron | 40.0% | |
| GCAGTGACAGTATAAAACAG+GGG | + | chr5_2:3618200-3618219 | None:intergenic | 40.0% | |
| CTTATGGACAGGACATTGTT+TGG | - | chr5_2:3618219-3618238 | Msa0750220:intron | 40.0% | |
| CTATGTGGGGAGGAAAATAA+GGG | + | chr5_2:3618546-3618565 | None:intergenic | 40.0% | |
| ACTATGTGGGGAGGAAAATA+AGG | + | chr5_2:3618547-3618566 | None:intergenic | 40.0% | |
| TAATGATAGACTATGTGGGG+AGG | + | chr5_2:3618556-3618575 | None:intergenic | 40.0% | |
| GTAATTAGGAGAAACGGCAA+GGG | + | chr5_2:3618889-3618908 | None:intergenic | 40.0% | |
| AGTAATTAGGAGAAACGGCA+AGG | + | chr5_2:3618890-3618909 | None:intergenic | 40.0% | |
| !!! | GTTTTTTCCCGATTTACCAG+AGG | - | chr5_2:3619053-3619072 | Msa0750220:intron | 40.0% |
| TTTGGATCCTCTGGTAAATC+GGG | + | chr5_2:3619063-3619082 | None:intergenic | 40.0% | |
| CTTTGGATCCTCTGGTAAAT+CGG | + | chr5_2:3619064-3619083 | None:intergenic | 40.0% | |
| AGGAATTGAACAGATGTTGC+TGG | + | chr5_2:3619256-3619275 | None:intergenic | 40.0% | |
| GCAACATCTGTTCAATTCCT+TGG | - | chr5_2:3619256-3619275 | Msa0750220:intron | 40.0% | |
| ATTAAGTTTGGCAGCGTAGA+TGG | - | chr5_2:3619312-3619331 | Msa0750220:intron | 40.0% | |
| ! | GTAGGAGGCTCTTTTCTAAA+TGG | - | chr5_2:3619561-3619580 | Msa0750220:intron | 40.0% |
| ! | GTTTTCGGTAAGTTAGGACA+GGG | + | chr5_2:3619591-3619610 | None:intergenic | 40.0% |
| ! | TGTTTTCGGTAAGTTAGGAC+AGG | + | chr5_2:3619592-3619611 | None:intergenic | 40.0% |
| ! | TCATGAAACTGTGTTCTGAG+AGG | + | chr5_2:3619670-3619689 | None:intergenic | 40.0% |
| CAGAACACAGTTTCATGAAC+TGG | - | chr5_2:3619672-3619691 | Msa0750220:CDS | 40.0% | |
| TCAACCCTTGTTACCACATT+CGG | + | chr5_2:3619716-3619735 | None:intergenic | 40.0% | |
| TGATTTAGCCAGTAACAGTG+GGG | - | chr5_2:3619842-3619861 | Msa0750220:intron | 40.0% | |
| TCAGCATTTCTTGATACCTG+AGG | + | chr5_2:3619954-3619973 | None:intergenic | 40.0% | |
| ATACAGCAACAAAAGCTGGA+TGG | + | chr5_2:3619980-3619999 | None:intergenic | 40.0% | |
| AGAATGTAAAGACGGATCAG+GGG | + | chr5_2:3620112-3620131 | None:intergenic | 40.0% | |
| CAGAATGTAAAGACGGATCA+GGG | + | chr5_2:3620113-3620132 | None:intergenic | 40.0% | |
| ACCACTTTCATGTAACGTCA+AGG | - | chr5_2:3620180-3620199 | Msa0750220:CDS | 40.0% | |
| TCCTTGACGTTACATGAAAG+TGG | + | chr5_2:3620184-3620203 | None:intergenic | 40.0% | |
| TTCATGCACTAGAACAGCTA+CGG | - | chr5_2:3620246-3620265 | Msa0750220:CDS | 40.0% | |
| TAAGGCAAGCAATTCTTCAC+AGG | - | chr5_2:3620280-3620299 | Msa0750220:CDS | 40.0% | |
| !! | CTTCACAGGTGAAGTATTGT+TGG | - | chr5_2:3620294-3620313 | Msa0750220:CDS | 40.0% |
| TATATCGTGGAAAGGAAGGA+GGG | + | chr5_2:3620346-3620365 | None:intergenic | 40.0% | |
| TTATATCGTGGAAAGGAAGG+AGG | + | chr5_2:3620347-3620366 | None:intergenic | 40.0% | |
| ! | ACTTTGACCAGTCTCTTTTC+CGG | - | chr5_2:3620496-3620515 | Msa0750220:intron | 40.0% |
| AAATCATTTGGCGCCAAGTT+AGG | - | chr5_2:3620617-3620636 | Msa0750220:intron | 40.0% | |
| ACCTCAAGCAATAAGGACAA+CGG | + | chr5_2:3620750-3620769 | None:intergenic | 40.0% | |
| ! | TGAGGTATCATGACAGACTT+TGG | - | chr5_2:3620764-3620783 | Msa0750220:intron | 40.0% |
| ! | TTGAACCGAGTTTCTTTTGG+TGG | - | chr5_2:3620818-3620837 | Msa0750220:intron | 40.0% |
| !! | TGATATGGTAATGGGAGTGA+AGG | - | chr5_2:3620891-3620910 | Msa0750220:intron | 40.0% |
| CAATTCCAAAGAGTGATAGC+TGG | - | chr5_2:3621084-3621103 | Msa0750220:intron | 40.0% | |
| !! | AGCTTATTTCTGCAGCTGAT+CGG | - | chr5_2:3621189-3621208 | Msa0750220:CDS | 40.0% |
| ! | TTAAACTTGAGAGTGTGTGG+AGG | + | chr5_2:3621260-3621279 | None:intergenic | 40.0% |
| ! | TGTGTTGCTAGCATTTCTCT+TGG | + | chr5_2:3621332-3621351 | None:intergenic | 40.0% |
| TAACACACACTCTCCTTGAT+TGG | - | chr5_2:3621357-3621376 | Msa0750220:intron | 40.0% | |
| ! | ACCAATCAAAGAGTGTGTGT+TGG | - | chr5_2:3621431-3621450 | Msa0750220:intron | 40.0% |
| TCCAACACACACTCTTTGAT+TGG | + | chr5_2:3621435-3621454 | None:intergenic | 40.0% | |
| ACATAGAGGAATGCTAGCAA+CGG | + | chr5_2:3621476-3621495 | None:intergenic | 40.0% | |
| TAGTCCACTTTCTAATGTGG+AGG | - | chr5_2:3621523-3621542 | Msa0750220:intron | 40.0% | |
| TATCATGCACACACTCTGTA+AGG | - | chr5_2:3621704-3621723 | Msa0750220:intron | 40.0% | |
| TCAAATTTAGGTCCTGAAGC+TGG | - | chr5_2:3621911-3621930 | Msa0750220:intron | 40.0% | |
| CAAATTTAGGTCCTGAAGCT+GGG | - | chr5_2:3621912-3621931 | Msa0750220:intron | 40.0% | |
| CAAGAACAAAGTCTGCTGTA+TGG | + | chr5_2:3622005-3622024 | None:intergenic | 40.0% | |
| !! | CTACAGTAGTAAGTTGGTGG+TGG | - | chr5_2:3615636-3615655 | Msa0750220:intron | 45.0% |
| CAAATTTGTACTCCTGCTCC+TGG | - | chr5_2:3616077-3616096 | Msa0750220:intron | 45.0% | |
| GAAGTGATTACACTAGTGCC+AGG | + | chr5_2:3616098-3616117 | None:intergenic | 45.0% | |
| ! | TGGTATCGGGTGTGATTGTA+GGG | - | chr5_2:3616434-3616453 | Msa0750220:intron | 45.0% |
| ! | TGGACTGTTTGCCACTTCTA+CGG | - | chr5_2:3617231-3617250 | Msa0750220:intron | 45.0% |
| ATGAATTTGGGCCGTAGAAG+TGG | + | chr5_2:3617245-3617264 | None:intergenic | 45.0% | |
| CAGCAGGTGCATCATGAATT+TGG | + | chr5_2:3617258-3617277 | None:intergenic | 45.0% | |
| ATTCATGATGCACCTGCTGT+TGG | - | chr5_2:3617259-3617278 | Msa0750220:CDS | 45.0% | |
| AATGGAAGATGGAGAGATCC+TGG | - | chr5_2:3617436-3617455 | Msa0750220:intron | 45.0% | |
| CAATAGCACGAACGTCAACA+AGG | + | chr5_2:3617595-3617614 | None:intergenic | 45.0% | |
| CTTGTTGACGTTCGTGCTAT+TGG | - | chr5_2:3617593-3617612 | Msa0750220:intron | 45.0% | |
| ! | TGTTGACGTTCGTGCTATTG+GGG | - | chr5_2:3617595-3617614 | Msa0750220:intron | 45.0% |
| ATCACGTGCAGCCTAATATG+GGG | - | chr5_2:3617865-3617884 | Msa0750220:intron | 45.0% | |
| TACTGTCACTGCTTATGGAC+AGG | - | chr5_2:3618208-3618227 | Msa0750220:intron | 45.0% | |
| GTGTGCAACAGTTGCAAATC+TGG | + | chr5_2:3618305-3618324 | None:intergenic | 45.0% | |
| ACCAGAGGATCCAAAGACTT+CGG | - | chr5_2:3619068-3619087 | Msa0750220:intron | 45.0% | |
| CATCTGTTCAATTCCTTGGC+AGG | - | chr5_2:3619260-3619279 | Msa0750220:intron | 45.0% | |
| TACGTACAAGAACCTGAGAG+AGG | - | chr5_2:3619438-3619457 | Msa0750220:CDS | 45.0% | |
| ACGTACAAGAACCTGAGAGA+GGG | - | chr5_2:3619439-3619458 | Msa0750220:CDS | 45.0% | |
| GAGGCTAGATGTCTACTACA+AGG | + | chr5_2:3619538-3619557 | None:intergenic | 45.0% | |
| TAGACATCTAGCCTCTCTGT+AGG | - | chr5_2:3619543-3619562 | Msa0750220:intron | 45.0% | |
| ! | GGGTTGAACTTTTGACGACT+AGG | - | chr5_2:3619729-3619748 | Msa0750220:CDS | 45.0% |
| GGCTTACAACTGTTAAGTGG+AGG | - | chr5_2:3619790-3619809 | Msa0750220:CDS | 45.0% | |
| GAATGTAAAGACGGATCAGG+GGG | + | chr5_2:3620111-3620130 | None:intergenic | 45.0% | |
| GCAGAATGTAAAGACGGATC+AGG | + | chr5_2:3620114-3620133 | None:intergenic | 45.0% | |
| AAAGCTCGTCTGCTGAATTC+TGG | + | chr5_2:3620136-3620155 | None:intergenic | 45.0% | |
| AGAACAGCTACGGAGCATAA+AGG | - | chr5_2:3620256-3620275 | Msa0750220:CDS | 45.0% | |
| GCTACGGAGCATAAAGGATA+AGG | - | chr5_2:3620262-3620281 | Msa0750220:CDS | 45.0% | |
| CTGACAGCTAAAAGGCAAAG+AGG | + | chr5_2:3620457-3620476 | None:intergenic | 45.0% | |
| CTCTGTGACTGACAGCTAAA+AGG | + | chr5_2:3620465-3620484 | None:intergenic | 45.0% | |
| ! | GACTGGTCAAAGTAAGGAGA+AGG | + | chr5_2:3620489-3620508 | None:intergenic | 45.0% |
| CATCAAACCGGAAAAGAGAC+TGG | + | chr5_2:3620506-3620525 | None:intergenic | 45.0% | |
| !! | CATGACAGACTTTGGTGTTG+TGG | - | chr5_2:3620772-3620791 | Msa0750220:intron | 45.0% |
| ! | AACCGAGTTTCTTTTGGTGG+AGG | - | chr5_2:3620821-3620840 | Msa0750220:intron | 45.0% |
| CACCTCCACCAAAAGAAACT+CGG | + | chr5_2:3620826-3620845 | None:intergenic | 45.0% | |
| ! | AGGTTCAGGAGGTTGATTAC+TGG | - | chr5_2:3620911-3620930 | Msa0750220:intron | 45.0% |
| TCAGGTTACTCGTGCAGAAA+AGG | - | chr5_2:3621034-3621053 | Msa0750220:intron | 45.0% | |
| CAGGTTACTCGTGCAGAAAA+GGG | - | chr5_2:3621035-3621054 | Msa0750220:intron | 45.0% | |
| TACTCGTGCAGAAAAGGGAT+AGG | - | chr5_2:3621040-3621059 | Msa0750220:intron | 45.0% | |
| CTCTTCCAGCTATCACTCTT+TGG | + | chr5_2:3621092-3621111 | None:intergenic | 45.0% | |
| ACAGGGAAAAAATGTGCACC+TGG | + | chr5_2:3621290-3621309 | None:intergenic | 45.0% | |
| CACATGGGATCCACATGATT+TGG | - | chr5_2:3621388-3621407 | Msa0750220:intron | 45.0% | |
| ! | ATGGGATCCACATGATTTGG+TGG | - | chr5_2:3621391-3621410 | Msa0750220:intron | 45.0% |
| !! | TGGGATCCACATGATTTGGT+GGG | - | chr5_2:3621392-3621411 | Msa0750220:intron | 45.0% |
| CATAGAGGAATGCTAGCAAC+GGG | + | chr5_2:3621475-3621494 | None:intergenic | 45.0% | |
| GCTTCCTCCACATTAGAAAG+TGG | + | chr5_2:3621530-3621549 | None:intergenic | 45.0% | |
| GGCTCACACAAATCTGTTGT+TGG | + | chr5_2:3621662-3621681 | None:intergenic | 45.0% | |
| !! | TTCCTTCTAGAATAGCGTGC+CGG | - | chr5_2:3621734-3621753 | Msa0750220:intron | 45.0% |
| GAGAGAGCAAAGGGCAAAAT+TGG | + | chr5_2:3621983-3622002 | None:intergenic | 45.0% | |
| TGCTGTATGGAGAGAGCAAA+GGG | + | chr5_2:3621992-3622011 | None:intergenic | 45.0% | |
| GACTTTGTTCTTGCAGCCTT+CGG | - | chr5_2:3622012-3622031 | Msa0750220:intron | 45.0% | |
| !! | TTATAAAAATAAAAATCATT+TGG | - | chr5_2:3620605-3620624 | Msa0750220:intron | 5.0% |
| GTAGGATAGAGTCGGAGTTG+CGG | + | chr5_2:3615357-3615376 | None:intergenic | 50.0% | |
| TGTTGACGGGAAGAGAAGTG+CGG | + | chr5_2:3615790-3615809 | None:intergenic | 50.0% | |
| GGTTGCAGAGATATTACCGG+CGG | + | chr5_2:3615822-3615841 | None:intergenic | 50.0% | |
| ATCAGTGTCCGTGTCGTGTA+CGG | - | chr5_2:3615895-3615914 | Msa0750220:intron | 50.0% | |
| ATTACACTAGTGCCAGGAGC+AGG | + | chr5_2:3616092-3616111 | None:intergenic | 50.0% | |
| ! | GTGGTATCGGGTGTGATTGT+AGG | - | chr5_2:3616433-3616452 | Msa0750220:intron | 50.0% |
| GCTTGCAGGTTCATCATGCT+CGG | - | chr5_2:3616900-3616919 | Msa0750220:intron | 50.0% | |
| !!! | TGCTCAGGTTGGCTAGCTTT+TGG | - | chr5_2:3617658-3617677 | Msa0750220:intron | 50.0% |
| AGGCCCAACAACTCCTCTAA+TGG | + | chr5_2:3617720-3617739 | None:intergenic | 50.0% | |
| TCCGAAGTCTTTGGATCCTC+TGG | + | chr5_2:3619072-3619091 | None:intergenic | 50.0% | |
| TCCTTGGCAGGTGCAATTCT+TGG | - | chr5_2:3619272-3619291 | Msa0750220:intron | 50.0% | |
| TCCAAGAATTGCACCTGCCA+AGG | + | chr5_2:3619276-3619295 | None:intergenic | 50.0% | |
| AAGTTTGGCAGCGTAGATGG+AGG | - | chr5_2:3619315-3619334 | Msa0750220:CDS | 50.0% | |
| AGTTTGGCAGCGTAGATGGA+GGG | - | chr5_2:3619316-3619335 | Msa0750220:CDS | 50.0% | |
| ACATCTAGCCTCTCTGTAGG+AGG | - | chr5_2:3619546-3619565 | Msa0750220:intron | 50.0% | |
| GAAAAGAGCCTCCTACAGAG+AGG | + | chr5_2:3619557-3619576 | None:intergenic | 50.0% | |
| ! | GGAGGGAGCATGCAATTACA+AGG | + | chr5_2:3620329-3620348 | None:intergenic | 50.0% |
| TGTTAGTGGGATTGGGGATG+AGG | - | chr5_2:3620695-3620714 | Msa0750220:intron | 50.0% | |
| GCCGTTGTCCTTATTGCTTG+AGG | - | chr5_2:3620746-3620765 | Msa0750220:intron | 50.0% | |
| ! | CGAGTTTCTTTTGGTGGAGG+TGG | - | chr5_2:3620824-3620843 | Msa0750220:intron | 50.0% |
| ! | GTTTCTTTTGGTGGAGGTGG+TGG | - | chr5_2:3620827-3620846 | Msa0750220:intron | 50.0% |
| !! | GGTAATGGGAGTGAAGGTTC+AGG | - | chr5_2:3620897-3620916 | Msa0750220:intron | 50.0% |
| AATGGGAGTGAAGGTTCAGG+AGG | - | chr5_2:3620900-3620919 | Msa0750220:intron | 50.0% | |
| ATGGGTCCCACCAAATCATG+TGG | + | chr5_2:3621401-3621420 | None:intergenic | 50.0% | |
| CTGCTGTATGGAGAGAGCAA+AGG | + | chr5_2:3621993-3622012 | None:intergenic | 50.0% | |
| TGCAGAGATATTACCGGCGG+TGG | + | chr5_2:3615819-3615838 | None:intergenic | 55.0% | |
| GACACGGACACTGATACACG+TGG | + | chr5_2:3615890-3615909 | None:intergenic | 55.0% | |
| ACACGACACCGTACACGACA+CGG | + | chr5_2:3615906-3615925 | None:intergenic | 55.0% | |
| CATGATGCACCTGCTGTTGG+AGG | - | chr5_2:3617262-3617281 | Msa0750220:CDS | 55.0% | |
| GTTTGGCAGCGTAGATGGAG+GGG | - | chr5_2:3619317-3619336 | Msa0750220:CDS | 55.0% | |
| AGAACCTGAGAGAGGGTCCA+AGG | - | chr5_2:3619446-3619465 | Msa0750220:CDS | 55.0% | |
| GAGCTCTTCCCCACTGTTAC+TGG | + | chr5_2:3619853-3619872 | None:intergenic | 55.0% | |
| GGACAACGGCCTGTCTCTAA+AGG | + | chr5_2:3620736-3620755 | None:intergenic | 55.0% | |
| GTCCGGCACGCTATTCTAGA+AGG | + | chr5_2:3621739-3621758 | None:intergenic | 55.0% | |
| AGGTCCTGAAGCTGGGAGTA+TGG | - | chr5_2:3621919-3621938 | Msa0750220:intron | 55.0% | |
| CCATCCATACTCCCAGCTTC+AGG | + | chr5_2:3621926-3621945 | None:intergenic | 55.0% | |
| ! | CCTGAAGCTGGGAGTATGGA+TGG | - | chr5_2:3621923-3621942 | Msa0750220:intron | 55.0% |
| ! | GAGAAGTGCGGTGACCGGAA+AGG | + | chr5_2:3615778-3615797 | None:intergenic | 60.0% |
| ! | GGGAAGAGAAGTGCGGTGAC+CGG | + | chr5_2:3615783-3615802 | None:intergenic | 60.0% |
| GATATTACCGGCGGTGGCGA+CGG | + | chr5_2:3615813-3615832 | None:intergenic | 60.0% | |
| TGGACAGCTCCTCCAACAGC+AGG | + | chr5_2:3617274-3617293 | None:intergenic | 60.0% | |
| TGCTGTTGGAGGAGCTGTCC+AGG | - | chr5_2:3617273-3617292 | Msa0750220:CDS | 60.0% | |
| GCTGTTGGAGGAGCTGTCCA+GGG | - | chr5_2:3617274-3617293 | Msa0750220:CDS | 60.0% | |
| !! | TTGGCCTTGGACCCTCTCTC+AGG | + | chr5_2:3619453-3619472 | None:intergenic | 60.0% |
| CCTAAGTGTGTGCGCGTGTC+CGG | + | chr5_2:3621756-3621775 | None:intergenic | 60.0% | |
| CCGGACACGCGCACACACTT+AGG | - | chr5_2:3621753-3621772 | Msa0750220:intron | 65.0% | |
| !! | GCGGTGGCGACGGTGTTGAC+GGG | + | chr5_2:3615803-3615822 | None:intergenic | 70.0% |
| ! | GGCGGTGGCGACGGTGTTGA+CGG | + | chr5_2:3615804-3615823 | None:intergenic | 70.0% |
| GTCAACACCGTCGCCACCGC+CGG | - | chr5_2:3615803-3615822 | Msa0750220:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 3615056 | 3622228 | 3615056 | ID=Msa0750220;Name=Msa0750220 |
| chr5_2 | mRNA | 3615056 | 3622228 | 3615056 | ID=Msa0750220-mRNA-1;Parent=Msa0750220;Name=Msa0750220-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.81|0.83|0.91|1|1|12|168|556 |
| chr5_2 | exon | 3615056 | 3615363 | 3615056 | ID=Msa0750220-mRNA-1:exon:1382;Parent=Msa0750220-mRNA-1 |
| chr5_2 | exon | 3615994 | 3616093 | 3615994 | ID=Msa0750220-mRNA-1:exon:1381;Parent=Msa0750220-mRNA-1 |
| chr5_2 | exon | 3616754 | 3616849 | 3616754 | ID=Msa0750220-mRNA-1:exon:1380;Parent=Msa0750220-mRNA-1 |
| chr5_2 | exon | 3616983 | 3617147 | 3616983 | ID=Msa0750220-mRNA-1:exon:1379;Parent=Msa0750220-mRNA-1 |
| chr5_2 | exon | 3617247 | 3617333 | 3617247 | ID=Msa0750220-mRNA-1:exon:1378;Parent=Msa0750220-mRNA-1 |
| chr5_2 | exon | 3617946 | 3618002 | 3617946 | ID=Msa0750220-mRNA-1:exon:1377;Parent=Msa0750220-mRNA-1 |
| chr5_2 | exon | 3618143 | 3618211 | 3618143 | ID=Msa0750220-mRNA-1:exon:1376;Parent=Msa0750220-mRNA-1 |
| chr5_2 | exon | 3619313 | 3619477 | 3619313 | ID=Msa0750220-mRNA-1:exon:1375;Parent=Msa0750220-mRNA-1 |
| chr5_2 | exon | 3619620 | 3619848 | 3619620 | ID=Msa0750220-mRNA-1:exon:1374;Parent=Msa0750220-mRNA-1 |
| chr5_2 | exon | 3619949 | 3620376 | 3619949 | ID=Msa0750220-mRNA-1:exon:1373;Parent=Msa0750220-mRNA-1 |
| chr5_2 | exon | 3621178 | 3621292 | 3621178 | ID=Msa0750220-mRNA-1:exon:1372;Parent=Msa0750220-mRNA-1 |
| chr5_2 | exon | 3622209 | 3622228 | 3622209 | ID=Msa0750220-mRNA-1:exon:1371;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3622209 | 3622228 | 3622209 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3621178 | 3621292 | 3621178 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3619949 | 3620376 | 3619949 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3619620 | 3619848 | 3619620 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3619313 | 3619477 | 3619313 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3618143 | 3618211 | 3618143 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3617946 | 3618002 | 3617946 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3617247 | 3617333 | 3617247 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3616983 | 3617147 | 3616983 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3616754 | 3616849 | 3616754 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3615994 | 3616093 | 3615994 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | CDS | 3615224 | 3615363 | 3615224 | ID=Msa0750220-mRNA-1:cds;Parent=Msa0750220-mRNA-1 |
| chr5_2 | three_prime_UTR | 3615056 | 3615223 | 3615056 | ID=Msa0750220-mRNA-1:three_prime_utr;Parent=Msa0750220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
