Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854120 | XP_003615824.1 | 94.470 | 217 | 9 | 1 | 1 | 214 | 1 | 217 | 2.47e-142 | 406 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854120 | sp|Q9LU68|CIA2_ARATH | 53.846 | 91 | 40 | 2 | 123 | 213 | 337 | 425 | 9.02e-22 | 95.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854120 | B7FH76 | 94.470 | 217 | 9 | 1 | 1 | 214 | 1 | 217 | 1.18e-142 | 406 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0854120 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004360 | Msa0854120 | 0.820734 | 5.863828e-53 | -8.615850e-47 |
| Msa0004980 | Msa0854120 | 0.807892 | 4.048041e-50 | -8.615850e-47 |
| Msa0012240 | Msa0854120 | 0.806349 | 8.590603e-50 | -8.615850e-47 |
| Msa0013050 | Msa0854120 | -0.813202 | 2.884390e-51 | -8.615850e-47 |
| Msa0027540 | Msa0854120 | 0.805915 | 1.060161e-49 | -8.615850e-47 |
| Msa0030380 | Msa0854120 | 0.866517 | 2.691390e-65 | -8.615850e-47 |
| Msa0030430 | Msa0854120 | 0.803266 | 3.784581e-49 | -8.615850e-47 |
| Msa0031050 | Msa0854120 | 0.808726 | 2.688169e-50 | -8.615850e-47 |
| Msa0032580 | Msa0854120 | 0.801553 | 8.528235e-49 | -8.615850e-47 |
| Msa0043940 | Msa0854120 | 0.836806 | 7.539192e-57 | -8.615850e-47 |
| Msa0044710 | Msa0854120 | 0.847532 | 1.089363e-59 | -8.615850e-47 |
| Msa0049400 | Msa0854120 | -0.811624 | 6.378167e-51 | -8.615850e-47 |
| Msa0072810 | Msa0854120 | 0.845553 | 3.780121e-59 | -8.615850e-47 |
| Msa0074320 | Msa0854120 | 0.800634 | 1.314540e-48 | -8.615850e-47 |
| Msa0075310 | Msa0854120 | 0.800733 | 1.254640e-48 | -8.615850e-47 |
| Msa0084680 | Msa0854120 | 0.804607 | 1.991516e-49 | -8.615850e-47 |
| Msa0085360 | Msa0854120 | -0.808864 | 2.511253e-50 | -8.615850e-47 |
| Msa0091570 | Msa0854120 | 0.805770 | 1.137038e-49 | -8.615850e-47 |
| Msa0092710 | Msa0854120 | 0.837442 | 5.186236e-57 | -8.615850e-47 |
| Msa0095010 | Msa0854120 | 0.801444 | 8.977802e-49 | -8.615850e-47 |
| Msa0095380 | Msa0854120 | 0.822381 | 2.441700e-53 | -8.615850e-47 |
| Msa0103000 | Msa0854120 | 0.843969 | 1.010051e-58 | -8.615850e-47 |
| Msa0104290 | Msa0854120 | 0.812781 | 3.567494e-51 | -8.615850e-47 |
| Msa0106790 | Msa0854120 | 0.804387 | 2.213363e-49 | -8.615850e-47 |
| Msa0115390 | Msa0854120 | 0.800083 | 1.702360e-48 | -8.615850e-47 |
| Msa0118380 | Msa0854120 | 0.818775 | 1.643890e-52 | -8.615850e-47 |
| Msa0118400 | Msa0854120 | 0.800586 | 1.344649e-48 | -8.615850e-47 |
| Msa0607200 | Msa0854120 | 0.842197 | 2.995538e-58 | -8.615850e-47 |
| Msa0607340 | Msa0854120 | -0.811137 | 8.137717e-51 | -8.615850e-47 |
| Msa0610370 | Msa0854120 | 0.822064 | 2.892086e-53 | -8.615850e-47 |
| Msa0618010 | Msa0854120 | 0.844577 | 6.936417e-59 | -8.615850e-47 |
| Msa0618510 | Msa0854120 | 0.801658 | 8.114156e-49 | -8.615850e-47 |
| Msa0621120 | Msa0854120 | 0.834265 | 3.312319e-56 | -8.615850e-47 |
| Msa0623700 | Msa0854120 | 0.804847 | 1.775126e-49 | -8.615850e-47 |
| Msa0646640 | Msa0854120 | 0.811270 | 7.614147e-51 | -8.615850e-47 |
| Msa0647380 | Msa0854120 | 0.818157 | 2.269518e-52 | -8.615850e-47 |
| Msa0650900 | Msa0854120 | 0.807159 | 5.791045e-50 | -8.615850e-47 |
| Msa0669850 | Msa0854120 | 0.828952 | 6.752535e-55 | -8.615850e-47 |
| Msa0677290 | Msa0854120 | 0.802460 | 5.552550e-49 | -8.615850e-47 |
| Msa0678860 | Msa0854120 | 0.817023 | 4.088046e-52 | -8.615850e-47 |
| Msa0690250 | Msa0854120 | 0.836253 | 1.043101e-56 | -8.615850e-47 |
| Msa0704220 | Msa0854120 | 0.820715 | 5.923538e-53 | -8.615850e-47 |
| Msa0709500 | Msa0854120 | 0.814467 | 1.518056e-51 | -8.615850e-47 |
| Msa0712980 | Msa0854120 | 0.810345 | 1.207177e-50 | -8.615850e-47 |
| Msa0729550 | Msa0854120 | 0.808279 | 3.348017e-50 | -8.615850e-47 |
| Msa0734660 | Msa0854120 | 0.950949 | 5.701507e-109 | -8.615850e-47 |
| Msa0738630 | Msa0854120 | -0.814031 | 1.894839e-51 | -8.615850e-47 |
| Msa0739010 | Msa0854120 | 0.819493 | 1.128307e-52 | -8.615850e-47 |
| Msa0769830 | Msa0854120 | 0.813306 | 2.735849e-51 | -8.615850e-47 |
| Msa0776220 | Msa0854120 | 0.936777 | 1.008700e-97 | -8.615850e-47 |
| Msa0783760 | Msa0854120 | -0.818410 | 1.988850e-52 | -8.615850e-47 |
| Msa0784860 | Msa0854120 | 0.827865 | 1.235172e-54 | -8.615850e-47 |
| Msa0787750 | Msa0854120 | 0.818544 | 1.855114e-52 | -8.615850e-47 |
| Msa0790850 | Msa0854120 | 0.826045 | 3.365440e-54 | -8.615850e-47 |
| Msa0792790 | Msa0854120 | -0.809973 | 1.451805e-50 | -8.615850e-47 |
| Msa0795090 | Msa0854120 | 0.812182 | 4.820992e-51 | -8.615850e-47 |
| Msa0804120 | Msa0854120 | 0.851263 | 9.948429e-61 | -8.615850e-47 |
| Msa0813180 | Msa0854120 | 0.804078 | 2.567498e-49 | -8.615850e-47 |
| Msa0813670 | Msa0854120 | 0.932563 | 7.053223e-95 | -8.615850e-47 |
| Msa0813720 | Msa0854120 | 0.910228 | 2.368345e-82 | -8.615850e-47 |
| Msa0813740 | Msa0854120 | 0.817513 | 3.171086e-52 | -8.615850e-47 |
| Msa0818980 | Msa0854120 | -0.808497 | 3.008024e-50 | -8.615850e-47 |
| Msa0819030 | Msa0854120 | -0.826541 | 2.563556e-54 | -8.615850e-47 |
| Msa0831580 | Msa0854120 | 0.819853 | 9.339756e-53 | -8.615850e-47 |
| Msa0831870 | Msa0854120 | 0.803398 | 3.552482e-49 | -8.615850e-47 |
| Msa0842210 | Msa0854120 | 0.825540 | 4.434493e-54 | -8.615850e-47 |
| Msa0147560 | Msa0854120 | 0.822312 | 2.533239e-53 | -8.615850e-47 |
| Msa0156650 | Msa0854120 | -0.803596 | 3.233200e-49 | -8.615850e-47 |
| Msa0168100 | Msa0854120 | 0.808668 | 2.766414e-50 | -8.615850e-47 |
| Msa0168640 | Msa0854120 | -0.821669 | 3.570373e-53 | -8.615850e-47 |
| Msa0171020 | Msa0854120 | 0.807597 | 4.676847e-50 | -8.615850e-47 |
| Msa0172970 | Msa0854120 | 0.802129 | 6.495854e-49 | -8.615850e-47 |
| Msa0173740 | Msa0854120 | 0.869190 | 3.726478e-66 | -8.615850e-47 |
| Msa0173820 | Msa0854120 | 0.867080 | 1.781009e-65 | -8.615850e-47 |
| Msa0173830 | Msa0854120 | 0.859972 | 2.857028e-63 | -8.615850e-47 |
| Msa0182640 | Msa0854120 | 0.834488 | 2.911987e-56 | -8.615850e-47 |
| Msa0182930 | Msa0854120 | 0.840180 | 1.015424e-57 | -8.615850e-47 |
| Msa0183620 | Msa0854120 | 0.818604 | 1.797470e-52 | -8.615850e-47 |
| Msa0187070 | Msa0854120 | 0.823293 | 1.497170e-53 | -8.615850e-47 |
| Msa0187930 | Msa0854120 | 0.809490 | 1.844120e-50 | -8.615850e-47 |
| Msa0193120 | Msa0854120 | 0.827837 | 1.254980e-54 | -8.615850e-47 |
| Msa0194540 | Msa0854120 | 0.810670 | 1.027137e-50 | -8.615850e-47 |
| Msa0194970 | Msa0854120 | 0.804069 | 2.578006e-49 | -8.615850e-47 |
| Msa0199690 | Msa0854120 | 0.808659 | 2.778340e-50 | -8.615850e-47 |
| Msa0200010 | Msa0854120 | 0.809664 | 1.691686e-50 | -8.615850e-47 |
| Msa0236270 | Msa0854120 | 0.811887 | 5.592514e-51 | -8.615850e-47 |
| Msa0238250 | Msa0854120 | -0.830492 | 2.849324e-55 | -8.615850e-47 |
| Msa0369220 | Msa0854120 | 0.830791 | 2.407228e-55 | -8.615850e-47 |
| Msa0376510 | Msa0854120 | 0.813476 | 2.511180e-51 | -8.615850e-47 |
| Msa0378080 | Msa0854120 | 0.833592 | 4.880931e-56 | -8.615850e-47 |
| Msa0380040 | Msa0854120 | 0.818400 | 1.998931e-52 | -8.615850e-47 |
| Msa0385580 | Msa0854120 | 0.806240 | 9.056420e-50 | -8.615850e-47 |
| Msa0388050 | Msa0854120 | 0.808912 | 2.452661e-50 | -8.615850e-47 |
| Msa0395960 | Msa0854120 | 0.820609 | 6.267415e-53 | -8.615850e-47 |
| Msa0398950 | Msa0854120 | 0.800100 | 1.688304e-48 | -8.615850e-47 |
| Msa0402330 | Msa0854120 | 0.802591 | 5.216486e-49 | -8.615850e-47 |
| Msa0421780 | Msa0854120 | -0.806086 | 9.759064e-50 | -8.615850e-47 |
| Msa0425050 | Msa0854120 | 0.818631 | 1.772503e-52 | -8.615850e-47 |
| Msa0429290 | Msa0854120 | 0.821431 | 4.052540e-53 | -8.615850e-47 |
| Msa0430620 | Msa0854120 | 0.826756 | 2.278450e-54 | -8.615850e-47 |
| Msa0436460 | Msa0854120 | 0.813707 | 2.233911e-51 | -8.615850e-47 |
| Msa0436500 | Msa0854120 | 0.815596 | 8.526206e-52 | -8.615850e-47 |
| Msa0443500 | Msa0854120 | 0.806896 | 6.582356e-50 | -8.615850e-47 |
| Msa0465790 | Msa0854120 | 0.845607 | 3.654733e-59 | -8.615850e-47 |
| Msa0467960 | Msa0854120 | -0.808758 | 2.646584e-50 | -8.615850e-47 |
| Msa0468160 | Msa0854120 | 0.827164 | 1.819306e-54 | -8.615850e-47 |
| Msa0470180 | Msa0854120 | 0.820071 | 8.322552e-53 | -8.615850e-47 |
| Msa0471590 | Msa0854120 | 0.800614 | 1.326802e-48 | -8.615850e-47 |
| Msa0472740 | Msa0854120 | 0.806143 | 9.491069e-50 | -8.615850e-47 |
| Msa0475580 | Msa0854120 | 0.823147 | 1.619695e-53 | -8.615850e-47 |
| Msa0244270 | Msa0854120 | 0.854227 | 1.416539e-61 | -8.615850e-47 |
| Msa0244780 | Msa0854120 | 0.804912 | 1.720173e-49 | -8.615850e-47 |
| Msa0262310 | Msa0854120 | 0.822003 | 2.988654e-53 | -8.615850e-47 |
| Msa0264050 | Msa0854120 | 0.813719 | 2.219970e-51 | -8.615850e-47 |
| Msa0264570 | Msa0854120 | 0.805344 | 1.396658e-49 | -8.615850e-47 |
| Msa0268130 | Msa0854120 | 0.814063 | 1.864498e-51 | -8.615850e-47 |
| Msa0275030 | Msa0854120 | 0.806552 | 7.781374e-50 | -8.615850e-47 |
| Msa0275680 | Msa0854120 | -0.801025 | 1.093605e-48 | -8.615850e-47 |
| Msa0280430 | Msa0854120 | 0.800748 | 1.246099e-48 | -8.615850e-47 |
| Msa0280490 | Msa0854120 | 0.858310 | 8.993640e-63 | -8.615850e-47 |
| Msa0280730 | Msa0854120 | 0.804144 | 2.487314e-49 | -8.615850e-47 |
| Msa0288240 | Msa0854120 | 0.811516 | 6.732374e-51 | -8.615850e-47 |
| Msa0298830 | Msa0854120 | 0.804482 | 2.115027e-49 | -8.615850e-47 |
| Msa0298990 | Msa0854120 | 0.810820 | 9.528932e-51 | -8.615850e-47 |
| Msa0301980 | Msa0854120 | 0.809422 | 1.907162e-50 | -8.615850e-47 |
| Msa0304920 | Msa0854120 | 0.804948 | 1.690295e-49 | -8.615850e-47 |
| Msa0318250 | Msa0854120 | 0.845516 | 3.867764e-59 | -8.615850e-47 |
| Msa0318270 | Msa0854120 | 0.829388 | 5.294938e-55 | -8.615850e-47 |
| Msa0318310 | Msa0854120 | 0.820750 | 5.816224e-53 | -8.615850e-47 |
| Msa0319200 | Msa0854120 | 0.807393 | 5.168151e-50 | -8.615850e-47 |
| Msa0320100 | Msa0854120 | 0.800176 | 1.629475e-48 | -8.615850e-47 |
| Msa0326670 | Msa0854120 | 0.804468 | 2.129390e-49 | -8.615850e-47 |
| Msa0337650 | Msa0854120 | 0.824195 | 9.204062e-54 | -8.615850e-47 |
| Msa0349060 | Msa0854120 | 0.823278 | 1.509321e-53 | -8.615850e-47 |
| Msa0355270 | Msa0854120 | 0.800360 | 1.494767e-48 | -8.615850e-47 |
| Msa0358170 | Msa0854120 | 0.838379 | 2.978361e-57 | -8.615850e-47 |
| Msa0484690 | Msa0854120 | 0.825260 | 5.163809e-54 | -8.615850e-47 |
| Msa0491020 | Msa0854120 | 0.829514 | 4.932723e-55 | -8.615850e-47 |
| Msa0504020 | Msa0854120 | 0.825412 | 4.753658e-54 | -8.615850e-47 |
| Msa0508590 | Msa0854120 | 0.816054 | 6.739538e-52 | -8.615850e-47 |
| Msa0508630 | Msa0854120 | 0.818152 | 2.275388e-52 | -8.615850e-47 |
| Msa0508870 | Msa0854120 | 0.807051 | 6.104048e-50 | -8.615850e-47 |
| Msa0509390 | Msa0854120 | 0.821848 | 3.246708e-53 | -8.615850e-47 |
| Msa0518040 | Msa0854120 | 0.827589 | 1.439134e-54 | -8.615850e-47 |
| Msa0519220 | Msa0854120 | 0.822624 | 2.143838e-53 | -8.615850e-47 |
| Msa0532330 | Msa0854120 | 0.807379 | 5.203555e-50 | -8.615850e-47 |
| Msa0532840 | Msa0854120 | 0.811047 | 8.510766e-51 | -8.615850e-47 |
| Msa0533010 | Msa0854120 | 0.817179 | 3.771997e-52 | -8.615850e-47 |
| Msa0535030 | Msa0854120 | 0.819012 | 1.451767e-52 | -8.615850e-47 |
| Msa0535060 | Msa0854120 | 0.816639 | 4.984166e-52 | -8.615850e-47 |
| Msa0553150 | Msa0854120 | 0.833176 | 6.198540e-56 | -8.615850e-47 |
| Msa0553220 | Msa0854120 | -0.814320 | 1.636212e-51 | -8.615850e-47 |
| Msa0555950 | Msa0854120 | 0.825791 | 3.866445e-54 | -8.615850e-47 |
| Msa0562300 | Msa0854120 | -0.802488 | 5.478267e-49 | -8.615850e-47 |
| Msa0564930 | Msa0854120 | 0.811312 | 7.456221e-51 | -8.615850e-47 |
| Msa0576940 | Msa0854120 | 0.801552 | 8.534300e-49 | -8.615850e-47 |
| Msa0578070 | Msa0854120 | -0.804891 | 1.737688e-49 | -8.615850e-47 |
| Msa0579290 | Msa0854120 | 0.820849 | 5.517389e-53 | -8.615850e-47 |
| Msa0579390 | Msa0854120 | 0.812413 | 4.293187e-51 | -8.615850e-47 |
| Msa0583740 | Msa0854120 | 0.806799 | 6.902347e-50 | -8.615850e-47 |
| Msa0583790 | Msa0854120 | 0.804739 | 1.869074e-49 | -8.615850e-47 |
| Msa0590680 | Msa0854120 | 0.835679 | 1.458344e-56 | -8.615850e-47 |
| Msa0591060 | Msa0854120 | 0.828958 | 6.728757e-55 | -8.615850e-47 |
| Msa0591770 | Msa0854120 | 0.824090 | 9.742997e-54 | -8.615850e-47 |
| Msa0846030 | Msa0854120 | 0.802080 | 6.649008e-49 | -8.615850e-47 |
| Msa0847080 | Msa0854120 | 0.801690 | 7.992196e-49 | -8.615850e-47 |
| Msa0854120 | Msa0874500 | 0.833663 | 4.687221e-56 | -8.615850e-47 |
| Msa0854120 | Msa0874570 | 0.804440 | 2.158146e-49 | -8.615850e-47 |
| Msa0854120 | Msa0878980 | -0.813031 | 3.143494e-51 | -8.615850e-47 |
| Msa0854120 | Msa0895030 | 0.802651 | 5.070675e-49 | -8.615850e-47 |
| Msa0854120 | Msa0900630 | 0.838099 | 3.515292e-57 | -8.615850e-47 |
| Msa0854120 | Msa0905260 | 0.827806 | 1.276358e-54 | -8.615850e-47 |
| Msa0854120 | Msa0905550 | 0.800107 | 1.682653e-48 | -8.615850e-47 |
| Msa0854120 | Msa0909000 | -0.803948 | 2.731944e-49 | -8.615850e-47 |
| Msa0854120 | Msa0926460 | 0.831536 | 1.579250e-55 | -8.615850e-47 |
| Msa0854120 | Msa0937240 | 0.820830 | 5.575320e-53 | -8.615850e-47 |
| Msa0854120 | Msa0965860 | 0.828135 | 1.063476e-54 | -8.615850e-47 |
| Msa0854120 | Msa0974530 | 0.819400 | 1.185056e-52 | -8.615850e-47 |
| Msa0854120 | Msa1000690 | 0.812834 | 3.472934e-51 | -8.615850e-47 |
| Msa0854120 | Msa1003310 | 0.807804 | 4.227050e-50 | -8.615850e-47 |
| Msa0854120 | Msa1018790 | 0.827013 | 1.977699e-54 | -8.615850e-47 |
| Msa0854120 | Msa1047400 | 0.815900 | 7.292480e-52 | -8.615850e-47 |
| Msa0854120 | Msa1048330 | 0.833565 | 4.956517e-56 | -8.615850e-47 |
| Msa0854120 | Msa1072460 | -0.809991 | 1.438908e-50 | -8.615850e-47 |
| Msa0854120 | Msa1081150 | 0.801674 | 8.055959e-49 | -8.615850e-47 |
| Msa0854120 | Msa1084470 | 0.852632 | 4.065460e-61 | -8.615850e-47 |
| Msa0854120 | Msa1100260 | 0.806189 | 9.283769e-50 | -8.615850e-47 |
| Msa0854120 | Msa1111630 | 0.807297 | 5.414689e-50 | -8.615850e-47 |
| Msa0854120 | Msa1126120 | -0.804670 | 1.932373e-49 | -8.615850e-47 |
| Msa0854120 | Msa1126510 | 0.803265 | 3.785373e-49 | -8.615850e-47 |
| Msa0854120 | Msa1135690 | 0.862900 | 3.652036e-64 | -8.615850e-47 |
| Msa0854120 | Msa1150230 | 0.823277 | 1.510579e-53 | -8.615850e-47 |
| Msa0854120 | Msa1157730 | 0.809532 | 1.806459e-50 | -8.615850e-47 |
| Msa0854120 | Msa1166010 | 0.822696 | 2.063501e-53 | -8.615850e-47 |
| Msa0854120 | Msa1166860 | 0.809966 | 1.456953e-50 | -8.615850e-47 |
| Msa0854120 | Msa1167170 | 0.800575 | 1.351171e-48 | -8.615850e-47 |
| Msa0854120 | Msa1171360 | 0.813787 | 2.144519e-51 | -8.615850e-47 |
| Msa0854120 | Msa1171690 | 0.808356 | 3.224554e-50 | -8.615850e-47 |
| Msa0854120 | Msa1171870 | 0.825693 | 4.079513e-54 | -8.615850e-47 |
| Msa0854120 | Msa1177240 | 0.808089 | 3.675763e-50 | -8.615850e-47 |
| Msa0854120 | Msa1187520 | 0.805518 | 1.284209e-49 | -8.615850e-47 |
| Msa0854120 | Msa1188940 | 0.823462 | 1.367102e-53 | -8.615850e-47 |
| Msa0854120 | Msa1224670 | 0.804992 | 1.654920e-49 | -8.615850e-47 |
| Msa0854120 | Msa1229700 | 0.801464 | 8.894990e-49 | -8.615850e-47 |
| Msa0854120 | Msa1249870 | 0.808941 | 2.418240e-50 | -8.615850e-47 |
| Msa0854120 | Msa1260130 | 0.812610 | 3.888066e-51 | -8.615850e-47 |
| Msa0854120 | Msa1269300 | 0.800134 | 1.662018e-48 | -8.615850e-47 |
| Msa0854120 | Msa1272330 | 0.806048 | 9.940738e-50 | -8.615850e-47 |
| Msa0854120 | Msa1282920 | 0.806098 | 9.702372e-50 | -8.615850e-47 |
| Msa0854120 | Msa1284520 | 0.824982 | 6.006855e-54 | -8.615850e-47 |
| Msa0854120 | Msa1306430 | 0.825573 | 4.355395e-54 | -8.615850e-47 |
| Msa0854120 | Msa1310290 | 0.801081 | 1.065154e-48 | -8.615850e-47 |
| Msa0854120 | Msa1317030 | 0.815820 | 7.600526e-52 | -8.615850e-47 |
| Msa0854120 | Msa1324000 | 0.814167 | 1.768165e-51 | -8.615850e-47 |
| Msa0854120 | Msa1337090 | 0.809922 | 1.489212e-50 | -8.615850e-47 |
| Msa0854120 | Msa1374440 | 0.828080 | 1.096395e-54 | -8.615850e-47 |
| Msa0854120 | Msa1378460 | 0.814784 | 1.291747e-51 | -8.615850e-47 |
| Msa0854120 | Msa1378470 | 0.817163 | 3.801935e-52 | -8.615850e-47 |
| Msa0854120 | Msa1379990 | 0.801432 | 9.029881e-49 | -8.615850e-47 |
| Msa0854120 | Msa1382310 | 0.803043 | 4.208982e-49 | -8.615850e-47 |
| Msa0854120 | Msa1397810 | 0.807370 | 5.224190e-50 | -8.615850e-47 |
| Msa0854120 | Msa1403930 | -0.819727 | 9.975287e-53 | -8.615850e-47 |
| Msa0854120 | Msa1410430 | -0.800714 | 1.266117e-48 | -8.615850e-47 |
| Msa0854120 | Msa1422270 | 0.827988 | 1.153797e-54 | -8.615850e-47 |
| Msa0854120 | Msa1427830 | 0.815367 | 9.589177e-52 | -8.615850e-47 |
| Msa0854120 | Msa1439120 | 0.838326 | 3.074131e-57 | -8.615850e-47 |
| Msa0854120 | Msa1440220 | 0.838721 | 2.430310e-57 | -8.615850e-47 |
| Msa0854120 | Msa1447300 | 0.802591 | 5.218324e-49 | -8.615850e-47 |
| Msa0854120 | Msa1448690 | 0.808103 | 3.650091e-50 | -8.615850e-47 |
| Msa0854120 | Msa1449880 | 0.825948 | 3.547360e-54 | -8.615850e-47 |
| Msa0854120 | Msa1453620 | 0.834857 | 2.351811e-56 | -8.615850e-47 |
| Msa0854120 | Msa1454110 | 0.822100 | 2.837714e-53 | -8.615850e-47 |
| Msa0854120 | Msa1455660 | 0.836552 | 8.754135e-57 | -8.615850e-47 |
| Msa0854120 | Msa1460470 | 0.822100 | 2.838264e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854120 | MtrunA17_Chr5g0431351 | 94.470 | 217 | 9 | 1 | 1 | 214 | 1 | 217 | 2.27e-146 | 406 |
| Msa0854120 | MtrunA17_Chr4g0071811 | 54.348 | 92 | 38 | 2 | 126 | 213 | 293 | 384 | 1.34e-22 | 94.4 |
| Msa0854120 | MtrunA17_Chr7g0226451 | 39.850 | 133 | 41 | 3 | 120 | 213 | 219 | 351 | 2.15e-20 | 87.8 |
| Msa0854120 | MtrunA17_Chr1g0209861 | 44.144 | 111 | 42 | 3 | 121 | 213 | 316 | 424 | 2.11e-19 | 85.5 |
| Msa0854120 | MtrunA17_Chr8g0390971 | 36.598 | 194 | 79 | 7 | 45 | 213 | 226 | 400 | 5.62e-19 | 84.3 |
| Msa0854120 | MtrunA17_Chr1g0150471 | 37.288 | 118 | 61 | 3 | 103 | 213 | 186 | 297 | 1.28e-13 | 68.6 |
| Msa0854120 | MtrunA17_Chr3g0136701 | 67.442 | 43 | 14 | 0 | 171 | 213 | 232 | 274 | 1.79e-11 | 62.0 |
| Msa0854120 | MtrunA17_Chr4g0072871 | 67.442 | 43 | 14 | 0 | 171 | 213 | 298 | 340 | 3.91e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0854120 | AT1G07050.1 | 64.286 | 112 | 27 | 5 | 109 | 213 | 88 | 193 | 1.28e-37 | 130 |
| Msa0854120 | AT1G07050.2 | 62.264 | 106 | 27 | 5 | 109 | 207 | 88 | 187 | 1.39e-32 | 117 |
| Msa0854120 | AT5G14370.1 | 53.211 | 109 | 36 | 3 | 120 | 213 | 228 | 336 | 3.92e-28 | 108 |
| Msa0854120 | AT4G25990.1 | 53.922 | 102 | 39 | 3 | 116 | 213 | 286 | 383 | 1.85e-23 | 97.1 |
| Msa0854120 | AT5G57180.2 | 53.846 | 91 | 40 | 2 | 123 | 213 | 337 | 425 | 9.17e-23 | 95.5 |
| Msa0854120 | AT1G73870.1 | 42.553 | 141 | 57 | 5 | 91 | 213 | 253 | 387 | 9.16e-21 | 89.4 |
| Msa0854120 | AT4G25990.2 | 47.009 | 117 | 39 | 4 | 116 | 213 | 286 | 398 | 1.05e-19 | 86.7 |
| Msa0854120 | AT4G25990.3 | 52.083 | 96 | 38 | 3 | 116 | 207 | 286 | 377 | 2.50e-19 | 85.5 |
| Msa0854120 | AT1G49130.1 | 52.747 | 91 | 34 | 3 | 125 | 213 | 237 | 320 | 3.99e-19 | 84.3 |
| Msa0854120 | AT1G49130.2 | 51.648 | 91 | 35 | 2 | 125 | 213 | 230 | 313 | 4.22e-19 | 84.0 |
| Msa0854120 | AT1G25440.1 | 46.429 | 112 | 42 | 4 | 120 | 213 | 292 | 403 | 7.50e-19 | 84.3 |
| Msa0854120 | AT5G57180.1 | 51.765 | 85 | 39 | 2 | 123 | 207 | 337 | 419 | 1.59e-18 | 83.6 |
| Msa0854120 | AT1G68520.1 | 41.525 | 118 | 51 | 3 | 114 | 213 | 282 | 399 | 1.77e-18 | 83.2 |
| Msa0854120 | AT2G24790.1 | 61.111 | 54 | 21 | 0 | 160 | 213 | 218 | 271 | 4.54e-13 | 67.0 |
| Msa0854120 | AT5G24930.1 | 53.226 | 62 | 29 | 0 | 152 | 213 | 276 | 337 | 6.77e-12 | 64.3 |
| Msa0854120 | AT5G57660.1 | 69.767 | 43 | 13 | 0 | 171 | 213 | 285 | 327 | 1.67e-11 | 62.8 |
Find 38 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTACAATGATGGATTT+TGG | 0.142786 | 5_4:+46412074 | Msa0854120:CDS |
| GGGAGTGGCATTAGATATTT+TGG | 0.144303 | 5_4:-46413278 | None:intergenic |
| ACTTCATGTTCTTCTTTCTT+TGG | 0.183818 | 5_4:-46411791 | None:intergenic |
| GGTCGGACCGTGGTTCTCTT+TGG | 0.219465 | 5_4:+46412164 | Msa0854120:CDS |
| GCTCTCTCTTCTTCCAATAT+TGG | 0.250193 | 5_4:-46412960 | None:intergenic |
| TTTGAACTATCAAGAGGTTT+TGG | 0.259887 | 5_4:+46412135 | Msa0854120:CDS |
| AAAAGTGTGACCTTGATTCT+TGG | 0.281388 | 5_4:-46413086 | None:intergenic |
| TCATTCTCTTCCAATTCTTT+AGG | 0.300647 | 5_4:-46413370 | None:intergenic |
| GTCGGACCGTGGTTCTCTTT+GGG | 0.318029 | 5_4:+46412165 | Msa0854120:CDS |
| TCCTTCTCTTCCTAAAGAAT+TGG | 0.329210 | 5_4:+46413360 | Msa0854120:three_prime_UTR |
| GAAGAGAAGCAAGTGTTCTT+AGG | 0.336563 | 5_4:+46412985 | Msa0854120:CDS |
| GATGGGAGAAGTGCCAATAT+TGG | 0.355037 | 5_4:+46412947 | Msa0854120:intron |
| ATAGTAGTAATGAGCTTCAT+TGG | 0.401933 | 5_4:+46411957 | Msa0854120:CDS |
| GTGTAAGATTTGTTGAAGTT+TGG | 0.413457 | 5_4:-46411839 | None:intergenic |
| CTCATCTTTCCCTTCATCAA+AGG | 0.415253 | 5_4:-46412005 | None:intergenic |
| TCATCTTTCCCTTCATCAAA+GGG | 0.428053 | 5_4:-46412004 | None:intergenic |
| GGTCTTTGAGTGGTAGCTTC+TGG | 0.429886 | 5_4:-46411815 | None:intergenic |
| ACTAACATATGAGCCACTAT+TGG | 0.440550 | 5_4:-46412218 | None:intergenic |
| GAAGAGAAGGACAGATTGAA+TGG | 0.450571 | 5_4:-46413348 | None:intergenic |
| AAGAGAGAAAATTACAATGA+TGG | 0.456769 | 5_4:+46412067 | Msa0854120:CDS |
| TGAGCTTCATTGGGATATCA+TGG | 0.472007 | 5_4:+46411967 | Msa0854120:CDS |
| GAAGGATTTCCCTTTGATGA+AGG | 0.484035 | 5_4:+46411995 | Msa0854120:CDS |
| TCCAATTCTTTAGGAAGAGA+AGG | 0.489389 | 5_4:-46413361 | None:intergenic |
| TAAGATTTGTTGAAGTTTGG+TGG | 0.507600 | 5_4:-46411836 | None:intergenic |
| TAGTAGTAATGAGCTTCATT+GGG | 0.508412 | 5_4:+46411958 | Msa0854120:CDS |
| AAGGATTTCCCTTTGATGAA+GGG | 0.518211 | 5_4:+46411996 | Msa0854120:CDS |
| TCATTGGGATATCATGGAAT+GGG | 0.521421 | 5_4:+46411973 | Msa0854120:CDS |
| AACATATGAGCCACTATTGG+AGG | 0.534168 | 5_4:-46412215 | None:intergenic |
| TTCATTGGGATATCATGGAA+TGG | 0.535775 | 5_4:+46411972 | Msa0854120:CDS |
| TGTGAAGAGACATTGAGGTC+AGG | 0.535996 | 5_4:+46413219 | Msa0854120:exon |
| TTTGAATTTGAACTATCAAG+AGG | 0.551159 | 5_4:+46412129 | Msa0854120:CDS |
| CGCTTTGTGAAGAGACATTG+AGG | 0.551371 | 5_4:+46413214 | Msa0854120:CDS |
| TGATAAAAGACCAAGAATCA+AGG | 0.578251 | 5_4:+46413076 | Msa0854120:CDS |
| ATATGAGCCACTATTGGAGG+AGG | 0.606351 | 5_4:-46412212 | None:intergenic |
| GAAGTTTGGTGGTCTTTGAG+TGG | 0.614300 | 5_4:-46411825 | None:intergenic |
| TTGGATGCATGGTCGGACCG+TGG | 0.623784 | 5_4:+46412154 | Msa0854120:CDS |
| TGGGATATCATGGAATGGGA+AGG | 0.627947 | 5_4:+46411977 | Msa0854120:CDS |
| CATTAGCCCAAAGAGAACCA+CGG | 0.726854 | 5_4:-46412171 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATATAGTTGTTATA+TGG | - | chr5_4:46412372-46412391 | None:intergenic | 10.0% |
| !!! | TAATTTTAAATAGTAACAAA+AGG | - | chr5_4:46412404-46412423 | None:intergenic | 10.0% |
| !!! | TAATTTATTTTTTGTTTAGA+TGG | + | chr5_4:46412929-46412948 | Msa0854120:intron | 10.0% |
| !!! | AATTTATTTTTTGTTTAGAT+GGG | + | chr5_4:46412930-46412949 | Msa0854120:intron | 10.0% |
| !!! | TTTCTTATTTTTTTTTTCAT+TGG | + | chr5_4:46413131-46413150 | Msa0854120:intron | 10.0% |
| !!! | TTCTTATTTTTTTTTTCATT+GGG | + | chr5_4:46413132-46413151 | Msa0854120:intron | 10.0% |
| !! | ATAATAATATAGTTGTTATA+TGG | - | chr5_4:46412372-46412391 | None:intergenic | 10.0% |
| !!! | TAATTTTAAATAGTAACAAA+AGG | - | chr5_4:46412404-46412423 | None:intergenic | 10.0% |
| !!! | TAATTTATTTTTTGTTTAGA+TGG | + | chr5_4:46412929-46412948 | Msa0854120:intron | 10.0% |
| !!! | AATTTATTTTTTGTTTAGAT+GGG | + | chr5_4:46412930-46412949 | Msa0854120:intron | 10.0% |
| !!! | TTTCTTATTTTTTTTTTCAT+TGG | + | chr5_4:46413131-46413150 | Msa0854120:intron | 10.0% |
| !!! | TTCTTATTTTTTTTTTCATT+GGG | + | chr5_4:46413132-46413151 | Msa0854120:intron | 10.0% |
| !!! | TATCAATTCTTATTCTTTTA+AGG | + | chr5_4:46412321-46412340 | Msa0854120:intron | 15.0% |
| !! | ATGAATTAAAAATACAAGTA+GGG | - | chr5_4:46413302-46413321 | None:intergenic | 15.0% |
| !!! | ATATTTATTTTTTTGAGAGA+AGG | - | chr5_4:46413423-46413442 | None:intergenic | 15.0% |
| !!! | TATCAATTCTTATTCTTTTA+AGG | + | chr5_4:46412321-46412340 | Msa0854120:intron | 15.0% |
| !! | ATGAATTAAAAATACAAGTA+GGG | - | chr5_4:46413302-46413321 | None:intergenic | 15.0% |
| !!! | ATATTTATTTTTTTGAGAGA+AGG | - | chr5_4:46413423-46413442 | None:intergenic | 15.0% |
| !!! | AAAATTACAATGATGGATTT+TGG | + | chr5_4:46412074-46412093 | Msa0854120:CDS | 20.0% |
| !!! | AAATTACAATGATGGATTTT+GGG | + | chr5_4:46412075-46412094 | Msa0854120:CDS | 20.0% |
| !! | TTATATATGAAAGTGAAGAT+TGG | - | chr5_4:46412253-46412272 | None:intergenic | 20.0% |
| !!! | TTTTTGGATAAGTTGTTATA+TGG | - | chr5_4:46412347-46412366 | None:intergenic | 20.0% |
| !! | ATATAACAACTTATCCAAAA+AGG | + | chr5_4:46412346-46412365 | Msa0854120:intron | 20.0% |
| !!! | TTTGTCGATAACTAAATTTT+TGG | + | chr5_4:46412671-46412690 | Msa0854120:intron | 20.0% |
| !!! | ATAACTAAATTTTTGGTGAT+AGG | + | chr5_4:46412678-46412697 | Msa0854120:intron | 20.0% |
| !!! | GTAACATATTTAGTTCATTT+TGG | + | chr5_4:46412774-46412793 | Msa0854120:intron | 20.0% |
| !!! | TTTTGTGATATTTTTGATGT+AGG | + | chr5_4:46413189-46413208 | Msa0854120:intron | 20.0% |
| !!! | TTTGTGATATTTTTGATGTA+GGG | + | chr5_4:46413190-46413209 | Msa0854120:intron | 20.0% |
| !!! | GATATTTTGGAAGATATTTT+AGG | - | chr5_4:46413268-46413287 | None:intergenic | 20.0% |
| !! | TGAATTAAAAATACAAGTAG+GGG | - | chr5_4:46413301-46413320 | None:intergenic | 20.0% |
| !! | GATGAATTAAAAATACAAGT+AGG | - | chr5_4:46413303-46413322 | None:intergenic | 20.0% |
| !!! | AAAATTACAATGATGGATTT+TGG | + | chr5_4:46412074-46412093 | Msa0854120:CDS | 20.0% |
| !!! | AAATTACAATGATGGATTTT+GGG | + | chr5_4:46412075-46412094 | Msa0854120:CDS | 20.0% |
| !! | TTATATATGAAAGTGAAGAT+TGG | - | chr5_4:46412253-46412272 | None:intergenic | 20.0% |
| !!! | TTTTTGGATAAGTTGTTATA+TGG | - | chr5_4:46412347-46412366 | None:intergenic | 20.0% |
| !! | ATATAACAACTTATCCAAAA+AGG | + | chr5_4:46412346-46412365 | Msa0854120:intron | 20.0% |
| !!! | TTTGTCGATAACTAAATTTT+TGG | + | chr5_4:46412671-46412690 | Msa0854120:intron | 20.0% |
| !!! | ATAACTAAATTTTTGGTGAT+AGG | + | chr5_4:46412678-46412697 | Msa0854120:intron | 20.0% |
| !!! | GTAACATATTTAGTTCATTT+TGG | + | chr5_4:46412774-46412793 | Msa0854120:intron | 20.0% |
| !!! | TTTTGTGATATTTTTGATGT+AGG | + | chr5_4:46413189-46413208 | Msa0854120:intron | 20.0% |
| !!! | TTTGTGATATTTTTGATGTA+GGG | + | chr5_4:46413190-46413209 | Msa0854120:intron | 20.0% |
| !!! | GATATTTTGGAAGATATTTT+AGG | - | chr5_4:46413268-46413287 | None:intergenic | 20.0% |
| !! | TGAATTAAAAATACAAGTAG+GGG | - | chr5_4:46413301-46413320 | None:intergenic | 20.0% |
| !! | GATGAATTAAAAATACAAGT+AGG | - | chr5_4:46413303-46413322 | None:intergenic | 20.0% |
| ! | AAGAGAGAAAATTACAATGA+TGG | + | chr5_4:46412067-46412086 | Msa0854120:CDS | 25.0% |
| ! | TTTGAATTTGAACTATCAAG+AGG | + | chr5_4:46412129-46412148 | Msa0854120:CDS | 25.0% |
| ! | TATTACTTAATTGACACCAA+CGG | - | chr5_4:46412541-46412560 | None:intergenic | 25.0% |
| !!! | TATGTTGACTTTTGTTTAGA+TGG | + | chr5_4:46412559-46412578 | Msa0854120:intron | 25.0% |
| ! | TTATTCGATCTATTCAATTG+TGG | + | chr5_4:46412642-46412661 | Msa0854120:intron | 25.0% |
| ! | AAGAGAGAAAATTACAATGA+TGG | + | chr5_4:46412067-46412086 | Msa0854120:CDS | 25.0% |
| ! | TTTGAATTTGAACTATCAAG+AGG | + | chr5_4:46412129-46412148 | Msa0854120:CDS | 25.0% |
| ! | TATTACTTAATTGACACCAA+CGG | - | chr5_4:46412541-46412560 | None:intergenic | 25.0% |
| !!! | TATGTTGACTTTTGTTTAGA+TGG | + | chr5_4:46412559-46412578 | Msa0854120:intron | 25.0% |
| ! | TTATTCGATCTATTCAATTG+TGG | + | chr5_4:46412642-46412661 | Msa0854120:intron | 25.0% |
| ACTTCATGTTCTTCTTTCTT+TGG | - | chr5_4:46411794-46411813 | None:intergenic | 30.0% | |
| !! | TAAGATTTGTTGAAGTTTGG+TGG | - | chr5_4:46411839-46411858 | None:intergenic | 30.0% |
| !! | GTGTAAGATTTGTTGAAGTT+TGG | - | chr5_4:46411842-46411861 | None:intergenic | 30.0% |
| ! | CTACTATTACAAGTGTTTTG+TGG | - | chr5_4:46411944-46411963 | None:intergenic | 30.0% |
| ATAGTAGTAATGAGCTTCAT+TGG | + | chr5_4:46411957-46411976 | Msa0854120:CDS | 30.0% | |
| TAGTAGTAATGAGCTTCATT+GGG | + | chr5_4:46411958-46411977 | Msa0854120:CDS | 30.0% | |
| ! | TTTGAACTATCAAGAGGTTT+TGG | + | chr5_4:46412135-46412154 | Msa0854120:CDS | 30.0% |
| ! | TAGTTGTTATATGGCCTTTT+TGG | - | chr5_4:46412363-46412382 | None:intergenic | 30.0% |
| ! | GCAAGAATAGTCATCAATTT+TGG | - | chr5_4:46412461-46412480 | None:intergenic | 30.0% |
| ATTACTTAATTGACACCAAC+GGG | - | chr5_4:46412540-46412559 | None:intergenic | 30.0% | |
| TGATAAAAGACCAAGAATCA+AGG | + | chr5_4:46413076-46413095 | Msa0854120:CDS | 30.0% | |
| TCATTCTCTTCCAATTCTTT+AGG | - | chr5_4:46413373-46413392 | None:intergenic | 30.0% | |
| ACTTCATGTTCTTCTTTCTT+TGG | - | chr5_4:46411794-46411813 | None:intergenic | 30.0% | |
| !! | TAAGATTTGTTGAAGTTTGG+TGG | - | chr5_4:46411839-46411858 | None:intergenic | 30.0% |
| !! | GTGTAAGATTTGTTGAAGTT+TGG | - | chr5_4:46411842-46411861 | None:intergenic | 30.0% |
| ! | CTACTATTACAAGTGTTTTG+TGG | - | chr5_4:46411944-46411963 | None:intergenic | 30.0% |
| ATAGTAGTAATGAGCTTCAT+TGG | + | chr5_4:46411957-46411976 | Msa0854120:CDS | 30.0% | |
| TAGTAGTAATGAGCTTCATT+GGG | + | chr5_4:46411958-46411977 | Msa0854120:CDS | 30.0% | |
| ! | TTTGAACTATCAAGAGGTTT+TGG | + | chr5_4:46412135-46412154 | Msa0854120:CDS | 30.0% |
| ! | TAGTTGTTATATGGCCTTTT+TGG | - | chr5_4:46412363-46412382 | None:intergenic | 30.0% |
| ! | GCAAGAATAGTCATCAATTT+TGG | - | chr5_4:46412461-46412480 | None:intergenic | 30.0% |
| ATTACTTAATTGACACCAAC+GGG | - | chr5_4:46412540-46412559 | None:intergenic | 30.0% | |
| TGATAAAAGACCAAGAATCA+AGG | + | chr5_4:46413076-46413095 | Msa0854120:CDS | 30.0% | |
| TCATTCTCTTCCAATTCTTT+AGG | - | chr5_4:46413373-46413392 | None:intergenic | 30.0% | |
| TTCATTGGGATATCATGGAA+TGG | + | chr5_4:46411972-46411991 | Msa0854120:CDS | 35.0% | |
| TCATTGGGATATCATGGAAT+GGG | + | chr5_4:46411973-46411992 | Msa0854120:CDS | 35.0% | |
| AAGGATTTCCCTTTGATGAA+GGG | + | chr5_4:46411996-46412015 | Msa0854120:CDS | 35.0% | |
| TCATCTTTCCCTTCATCAAA+GGG | - | chr5_4:46412007-46412026 | None:intergenic | 35.0% | |
| ACTAACATATGAGCCACTAT+TGG | - | chr5_4:46412221-46412240 | None:intergenic | 35.0% | |
| TTGATCGCTTTCTGGATAAT+AGG | + | chr5_4:46412596-46412615 | Msa0854120:intron | 35.0% | |
| GATAGGTAATCTTTGATGCT+TGG | + | chr5_4:46412695-46412714 | Msa0854120:intron | 35.0% | |
| !! | CAGCGTTTAATTTTCGAACT+TGG | - | chr5_4:46413058-46413077 | None:intergenic | 35.0% |
| ! | AAAAGTGTGACCTTGATTCT+TGG | - | chr5_4:46413089-46413108 | None:intergenic | 35.0% |
| TAAAAATACAAGTAGGGGAG+TGG | - | chr5_4:46413296-46413315 | None:intergenic | 35.0% | |
| TCCTTCTCTTCCTAAAGAAT+TGG | + | chr5_4:46413360-46413379 | Msa0854120:three_prime_UTR | 35.0% | |
| ! | TCCAATTCTTTAGGAAGAGA+AGG | - | chr5_4:46413364-46413383 | None:intergenic | 35.0% |
| AAGAGATGAAGTGTATCTCA+TGG | - | chr5_4:46411765-46411784 | None:intergenic | 35.0% | |
| TTCATTGGGATATCATGGAA+TGG | + | chr5_4:46411972-46411991 | Msa0854120:CDS | 35.0% | |
| TCATTGGGATATCATGGAAT+GGG | + | chr5_4:46411973-46411992 | Msa0854120:CDS | 35.0% | |
| AAGGATTTCCCTTTGATGAA+GGG | + | chr5_4:46411996-46412015 | Msa0854120:CDS | 35.0% | |
| TCATCTTTCCCTTCATCAAA+GGG | - | chr5_4:46412007-46412026 | None:intergenic | 35.0% | |
| ACTAACATATGAGCCACTAT+TGG | - | chr5_4:46412221-46412240 | None:intergenic | 35.0% | |
| TTGATCGCTTTCTGGATAAT+AGG | + | chr5_4:46412596-46412615 | Msa0854120:intron | 35.0% | |
| GATAGGTAATCTTTGATGCT+TGG | + | chr5_4:46412695-46412714 | Msa0854120:intron | 35.0% | |
| !! | CAGCGTTTAATTTTCGAACT+TGG | - | chr5_4:46413058-46413077 | None:intergenic | 35.0% |
| ! | AAAAGTGTGACCTTGATTCT+TGG | - | chr5_4:46413089-46413108 | None:intergenic | 35.0% |
| TAAAAATACAAGTAGGGGAG+TGG | - | chr5_4:46413296-46413315 | None:intergenic | 35.0% | |
| TCCTTCTCTTCCTAAAGAAT+TGG | + | chr5_4:46413360-46413379 | Msa0854120:three_prime_UTR | 35.0% | |
| ! | TCCAATTCTTTAGGAAGAGA+AGG | - | chr5_4:46413364-46413383 | None:intergenic | 35.0% |
| TGAGCTTCATTGGGATATCA+TGG | + | chr5_4:46411967-46411986 | Msa0854120:CDS | 40.0% | |
| GAAGGATTTCCCTTTGATGA+AGG | + | chr5_4:46411995-46412014 | Msa0854120:CDS | 40.0% | |
| CTCATCTTTCCCTTCATCAA+AGG | - | chr5_4:46412008-46412027 | None:intergenic | 40.0% | |
| !!! | ATCAAGAGGTTTTGGATGCA+TGG | + | chr5_4:46412143-46412162 | Msa0854120:CDS | 40.0% |
| ! | TCATTTTCCTCCTCCAATAG+TGG | + | chr5_4:46412205-46412224 | Msa0854120:CDS | 40.0% |
| AACATATGAGCCACTATTGG+AGG | - | chr5_4:46412218-46412237 | None:intergenic | 40.0% | |
| ! | CGCATAAAGATTTTACCCGT+TGG | + | chr5_4:46412522-46412541 | Msa0854120:intron | 40.0% |
| AACTCTTGTTGATCGCTTTC+TGG | + | chr5_4:46412588-46412607 | Msa0854120:intron | 40.0% | |
| GCTCTCTCTTCTTCCAATAT+TGG | - | chr5_4:46412963-46412982 | None:intergenic | 40.0% | |
| GAAGAGAAGCAAGTGTTCTT+AGG | + | chr5_4:46412985-46413004 | Msa0854120:CDS | 40.0% | |
| ! | GGGAGTGGCATTAGATATTT+TGG | - | chr5_4:46413281-46413300 | None:intergenic | 40.0% |
| GAAGAGAAGGACAGATTGAA+TGG | - | chr5_4:46413351-46413370 | None:intergenic | 40.0% | |
| TGAGCTTCATTGGGATATCA+TGG | + | chr5_4:46411967-46411986 | Msa0854120:CDS | 40.0% | |
| GAAGGATTTCCCTTTGATGA+AGG | + | chr5_4:46411995-46412014 | Msa0854120:CDS | 40.0% | |
| CTCATCTTTCCCTTCATCAA+AGG | - | chr5_4:46412008-46412027 | None:intergenic | 40.0% | |
| !!! | ATCAAGAGGTTTTGGATGCA+TGG | + | chr5_4:46412143-46412162 | Msa0854120:CDS | 40.0% |
| ! | TCATTTTCCTCCTCCAATAG+TGG | + | chr5_4:46412205-46412224 | Msa0854120:CDS | 40.0% |
| AACATATGAGCCACTATTGG+AGG | - | chr5_4:46412218-46412237 | None:intergenic | 40.0% | |
| ! | CGCATAAAGATTTTACCCGT+TGG | + | chr5_4:46412522-46412541 | Msa0854120:intron | 40.0% |
| AACTCTTGTTGATCGCTTTC+TGG | + | chr5_4:46412588-46412607 | Msa0854120:intron | 40.0% | |
| GCTCTCTCTTCTTCCAATAT+TGG | - | chr5_4:46412963-46412982 | None:intergenic | 40.0% | |
| GAAGAGAAGCAAGTGTTCTT+AGG | + | chr5_4:46412985-46413004 | Msa0854120:CDS | 40.0% | |
| ! | GGGAGTGGCATTAGATATTT+TGG | - | chr5_4:46413281-46413300 | None:intergenic | 40.0% |
| GAAGAGAAGGACAGATTGAA+TGG | - | chr5_4:46413351-46413370 | None:intergenic | 40.0% | |
| ! | GAAGTTTGGTGGTCTTTGAG+TGG | - | chr5_4:46411828-46411847 | None:intergenic | 45.0% |
| TGGGATATCATGGAATGGGA+AGG | + | chr5_4:46411977-46411996 | Msa0854120:CDS | 45.0% | |
| !!! | CAATGATGGATTTTGGGACG+TGG | + | chr5_4:46412081-46412100 | Msa0854120:CDS | 45.0% |
| !!! | AGAGGTTTTGGATGCATGGT+CGG | + | chr5_4:46412147-46412166 | Msa0854120:CDS | 45.0% |
| CATTAGCCCAAAGAGAACCA+CGG | - | chr5_4:46412174-46412193 | None:intergenic | 45.0% | |
| ATATGAGCCACTATTGGAGG+AGG | - | chr5_4:46412215-46412234 | None:intergenic | 45.0% | |
| !! | GATGGGAGAAGTGCCAATAT+TGG | + | chr5_4:46412947-46412966 | Msa0854120:intron | 45.0% |
| CGCTTTGTGAAGAGACATTG+AGG | + | chr5_4:46413214-46413233 | Msa0854120:CDS | 45.0% | |
| TGTGAAGAGACATTGAGGTC+AGG | + | chr5_4:46413219-46413238 | Msa0854120:exon | 45.0% | |
| ! | GAAGTTTGGTGGTCTTTGAG+TGG | - | chr5_4:46411828-46411847 | None:intergenic | 45.0% |
| TGGGATATCATGGAATGGGA+AGG | + | chr5_4:46411977-46411996 | Msa0854120:CDS | 45.0% | |
| !!! | CAATGATGGATTTTGGGACG+TGG | + | chr5_4:46412081-46412100 | Msa0854120:CDS | 45.0% |
| !!! | AGAGGTTTTGGATGCATGGT+CGG | + | chr5_4:46412147-46412166 | Msa0854120:CDS | 45.0% |
| CATTAGCCCAAAGAGAACCA+CGG | - | chr5_4:46412174-46412193 | None:intergenic | 45.0% | |
| ATATGAGCCACTATTGGAGG+AGG | - | chr5_4:46412215-46412234 | None:intergenic | 45.0% | |
| !! | GATGGGAGAAGTGCCAATAT+TGG | + | chr5_4:46412947-46412966 | Msa0854120:intron | 45.0% |
| CGCTTTGTGAAGAGACATTG+AGG | + | chr5_4:46413214-46413233 | Msa0854120:CDS | 45.0% | |
| TGTGAAGAGACATTGAGGTC+AGG | + | chr5_4:46413219-46413238 | Msa0854120:exon | 45.0% | |
| !! | TAAACAAAAAATAAATTATA+AGG | - | chr5_4:46412927-46412946 | None:intergenic | 5.0% |
| !! | TAAACAAAAAATAAATTATA+AGG | - | chr5_4:46412927-46412946 | None:intergenic | 5.0% |
| GGTCTTTGAGTGGTAGCTTC+TGG | - | chr5_4:46411818-46411837 | None:intergenic | 50.0% | |
| GGTCTTTGAGTGGTAGCTTC+TGG | - | chr5_4:46411818-46411837 | None:intergenic | 50.0% | |
| GTCGGACCGTGGTTCTCTTT+GGG | + | chr5_4:46412165-46412184 | Msa0854120:CDS | 55.0% | |
| GTCGGACCGTGGTTCTCTTT+GGG | + | chr5_4:46412165-46412184 | Msa0854120:CDS | 55.0% | |
| TTGGATGCATGGTCGGACCG+TGG | + | chr5_4:46412154-46412173 | Msa0854120:CDS | 60.0% | |
| GGTCGGACCGTGGTTCTCTT+TGG | + | chr5_4:46412164-46412183 | Msa0854120:CDS | 60.0% | |
| TTGGATGCATGGTCGGACCG+TGG | + | chr5_4:46412154-46412173 | Msa0854120:CDS | 60.0% | |
| GGTCGGACCGTGGTTCTCTT+TGG | + | chr5_4:46412164-46412183 | Msa0854120:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 46411764 | 46413453 | 46411764 | ID=Msa0854120;Name=Msa0854120 |
| chr5_4 | mRNA | 46411764 | 46413453 | 46411764 | ID=Msa0854120-mRNA-1;Parent=Msa0854120;Name=Msa0854120-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.5|0.33|1|0.5|0.33|3|219|214 |
| chr5_4 | exon | 46411764 | 46412234 | 46411764 | ID=Msa0854120-mRNA-1:exon:14700;Parent=Msa0854120-mRNA-1 |
| chr5_4 | exon | 46412948 | 46413097 | 46412948 | ID=Msa0854120-mRNA-1:exon:14701;Parent=Msa0854120-mRNA-1 |
| chr5_4 | exon | 46413211 | 46413453 | 46413211 | ID=Msa0854120-mRNA-1:exon:14702;Parent=Msa0854120-mRNA-1 |
| chr5_4 | CDS | 46411764 | 46412234 | 46411764 | ID=Msa0854120-mRNA-1:cds;Parent=Msa0854120-mRNA-1 |
| chr5_4 | CDS | 46412948 | 46413097 | 46412948 | ID=Msa0854120-mRNA-1:cds;Parent=Msa0854120-mRNA-1 |
| chr5_4 | CDS | 46413211 | 46413234 | 46413211 | ID=Msa0854120-mRNA-1:cds;Parent=Msa0854120-mRNA-1 |
| chr5_4 | three_prime_UTR | 46413235 | 46413453 | 46413235 | ID=Msa0854120-mRNA-1:three_prime_utr;Parent=Msa0854120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
