Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832600 | XP_003611121.1 | 95.694 | 209 | 9 | 0 | 1 | 209 | 1 | 209 | 5.52e-129 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832600 | sp|P93788|REMO_SOLTU | 48.691 | 191 | 92 | 4 | 20 | 207 | 11 | 198 | 8.95e-49 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832600 | G7KDE4 | 95.694 | 209 | 9 | 0 | 1 | 209 | 1 | 209 | 2.64e-129 | 372 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003400 | Msa0832600 | 0.803006 | 4.282202e-49 | -8.615850e-47 |
| Msa0010110 | Msa0832600 | 0.815911 | 7.252966e-52 | -8.615850e-47 |
| Msa0046560 | Msa0832600 | 0.801662 | 8.101015e-49 | -8.615850e-47 |
| Msa0050820 | Msa0832600 | 0.816950 | 4.246580e-52 | -8.615850e-47 |
| Msa0054820 | Msa0832600 | 0.802075 | 6.664701e-49 | -8.615850e-47 |
| Msa0079130 | Msa0832600 | 0.830382 | 3.030887e-55 | -8.615850e-47 |
| Msa0081650 | Msa0832600 | 0.804168 | 2.459156e-49 | -8.615850e-47 |
| Msa0104670 | Msa0832600 | 0.823761 | 1.163546e-53 | -8.615850e-47 |
| Msa0104800 | Msa0832600 | 0.807371 | 5.223085e-50 | -8.615850e-47 |
| Msa0106620 | Msa0832600 | 0.815308 | 9.878600e-52 | -8.615850e-47 |
| Msa0106710 | Msa0832600 | 0.819658 | 1.034481e-52 | -8.615850e-47 |
| Msa0641730 | Msa0832600 | 0.800321 | 1.522765e-48 | -8.615850e-47 |
| Msa0661320 | Msa0832600 | 0.804369 | 2.232596e-49 | -8.615850e-47 |
| Msa0679360 | Msa0832600 | 0.800908 | 1.155968e-48 | -8.615850e-47 |
| Msa0709120 | Msa0832600 | 0.814495 | 1.496413e-51 | -8.615850e-47 |
| Msa0709160 | Msa0832600 | 0.803010 | 4.275255e-49 | -8.615850e-47 |
| Msa0721280 | Msa0832600 | 0.887551 | 1.291765e-72 | -8.615850e-47 |
| Msa0738030 | Msa0832600 | 0.818032 | 2.421815e-52 | -8.615850e-47 |
| Msa0753370 | Msa0832600 | 0.966050 | 2.093306e-125 | -8.615850e-47 |
| Msa0756380 | Msa0832600 | 0.805525 | 1.280048e-49 | -8.615850e-47 |
| Msa0763890 | Msa0832600 | 0.809700 | 1.661910e-50 | -8.615850e-47 |
| Msa0763920 | Msa0832600 | 0.812919 | 3.327701e-51 | -8.615850e-47 |
| Msa0789560 | Msa0832600 | 0.806366 | 8.516871e-50 | -8.615850e-47 |
| Msa0795360 | Msa0832600 | 0.950227 | 2.544354e-108 | -8.615850e-47 |
| Msa0795370 | Msa0832600 | 0.852387 | 4.772807e-61 | -8.615850e-47 |
| Msa0811040 | Msa0832600 | 0.808894 | 2.474205e-50 | -8.615850e-47 |
| Msa0817460 | Msa0832600 | 0.837896 | 3.964561e-57 | -8.615850e-47 |
| Msa0832600 | Msa0835230 | 0.801281 | 9.696209e-49 | -8.615850e-47 |
| Msa0832600 | Msa0890550 | 0.816640 | 4.983465e-52 | -8.615850e-47 |
| Msa0832600 | Msa0894710 | 0.813572 | 2.392042e-51 | -8.615850e-47 |
| Msa0832600 | Msa0921420 | 0.822159 | 2.749924e-53 | -8.615850e-47 |
| Msa0832600 | Msa0933760 | 0.838680 | 2.490795e-57 | -8.615850e-47 |
| Msa0832600 | Msa0934140 | 0.834491 | 2.906830e-56 | -8.615850e-47 |
| Msa0832600 | Msa0960390 | 0.819655 | 1.036461e-52 | -8.615850e-47 |
| Msa0832600 | Msa0962840 | 0.817858 | 2.651171e-52 | -8.615850e-47 |
| Msa0832600 | Msa0969370 | 0.800149 | 1.649941e-48 | -8.615850e-47 |
| Msa0832600 | Msa0971650 | 0.804663 | 1.938567e-49 | -8.615850e-47 |
| Msa0832600 | Msa0986510 | 0.805549 | 1.265005e-49 | -8.615850e-47 |
| Msa0832600 | Msa0990580 | 0.807740 | 4.360298e-50 | -8.615850e-47 |
| Msa0832600 | Msa0992580 | 0.809397 | 1.930555e-50 | -8.615850e-47 |
| Msa0832600 | Msa0994370 | 0.803830 | 2.891253e-49 | -8.615850e-47 |
| Msa0832600 | Msa1002960 | 0.808607 | 2.850365e-50 | -8.615850e-47 |
| Msa0832600 | Msa1034500 | 0.811805 | 5.826143e-51 | -8.615850e-47 |
| Msa0832600 | Msa1036610 | 0.818679 | 1.728320e-52 | -8.615850e-47 |
| Msa0832600 | Msa1063420 | 0.836820 | 7.479228e-57 | -8.615850e-47 |
| Msa0832600 | Msa1089450 | 0.803283 | 3.752754e-49 | -8.615850e-47 |
| Msa0832600 | Msa1094190 | 0.815028 | 1.140270e-51 | -8.615850e-47 |
| Msa0832600 | Msa1108710 | 0.800958 | 1.129068e-48 | -8.615850e-47 |
| Msa0832600 | Msa1130530 | 0.801469 | 8.875118e-49 | -8.615850e-47 |
| Msa0832600 | Msa1163730 | 0.818344 | 2.059068e-52 | -8.615850e-47 |
| Msa0832600 | Msa1208790 | 0.826377 | 2.805730e-54 | -8.615850e-47 |
| Msa0832600 | Msa1211340 | 0.803237 | 3.836456e-49 | -8.615850e-47 |
| Msa0832600 | Msa1227150 | 0.818728 | 1.684462e-52 | -8.615850e-47 |
| Msa0832600 | Msa1234620 | 0.812671 | 3.770635e-51 | -8.615850e-47 |
| Msa0832600 | Msa1243870 | 0.803047 | 4.200541e-49 | -8.615850e-47 |
| Msa0832600 | Msa1258980 | 0.835138 | 1.997520e-56 | -8.615850e-47 |
| Msa0832600 | Msa1259640 | 0.800642 | 1.309654e-48 | -8.615850e-47 |
| Msa0832600 | Msa1270660 | 0.814720 | 1.334193e-51 | -8.615850e-47 |
| Msa0832600 | Msa1329790 | 0.802393 | 5.731761e-49 | -8.615850e-47 |
| Msa0832600 | Msa1330630 | 0.833574 | 4.931030e-56 | -8.615850e-47 |
| Msa0832600 | Msa1332050 | 0.818917 | 1.526457e-52 | -8.615850e-47 |
| Msa0832600 | Msa1340200 | 0.826258 | 2.994635e-54 | -8.615850e-47 |
| Msa0832600 | Msa1353470 | 0.814259 | 1.687347e-51 | -8.615850e-47 |
| Msa0832600 | Msa1357890 | 0.887021 | 2.055742e-72 | -8.615850e-47 |
| Msa0832600 | Msa1358070 | 0.977078 | 4.565289e-143 | -8.615850e-47 |
| Msa0832600 | Msa1368360 | 0.823764 | 1.161698e-53 | -8.615850e-47 |
| Msa0832600 | Msa1384100 | 0.801493 | 8.774812e-49 | -8.615850e-47 |
| Msa0832600 | Msa1393120 | 0.807080 | 6.017940e-50 | -8.615850e-47 |
| Msa0832600 | Msa1398090 | 0.893898 | 4.090886e-75 | -8.615850e-47 |
| Msa0832600 | Msa1425260 | 0.801751 | 7.768363e-49 | -8.615850e-47 |
| Msa0832600 | Msa1437330 | 0.804078 | 2.567523e-49 | -8.615850e-47 |
| Msa0832600 | Msa1444120 | 0.802036 | 6.787827e-49 | -8.615850e-47 |
| Msa0832600 | Msa1456230 | 0.806877 | 6.645727e-50 | -8.615850e-47 |
| Msa0832600 | Msa1463900 | 0.801829 | 7.484944e-49 | -8.615850e-47 |
| Msa0126790 | Msa0832600 | 0.830821 | 2.366938e-55 | -8.615850e-47 |
| Msa0139670 | Msa0832600 | 0.814256 | 1.690516e-51 | -8.615850e-47 |
| Msa0146540 | Msa0832600 | 0.807492 | 4.922081e-50 | -8.615850e-47 |
| Msa0150860 | Msa0832600 | 0.820366 | 7.123524e-53 | -8.615850e-47 |
| Msa0160960 | Msa0832600 | 0.813819 | 2.110663e-51 | -8.615850e-47 |
| Msa0171870 | Msa0832600 | 0.820744 | 5.833895e-53 | -8.615850e-47 |
| Msa0173800 | Msa0832600 | 0.807340 | 5.301438e-50 | -8.615850e-47 |
| Msa0202800 | Msa0832600 | 0.819503 | 1.122149e-52 | -8.615850e-47 |
| Msa0204960 | Msa0832600 | 0.823086 | 1.673358e-53 | -8.615850e-47 |
| Msa0205010 | Msa0832600 | 0.809288 | 2.037369e-50 | -8.615850e-47 |
| Msa0206830 | Msa0832600 | 0.815106 | 1.095734e-51 | -8.615850e-47 |
| Msa0207030 | Msa0832600 | 0.808811 | 2.577986e-50 | -8.615850e-47 |
| Msa0225220 | Msa0832600 | 0.811144 | 8.107199e-51 | -8.615850e-47 |
| Msa0366210 | Msa0832600 | 0.817278 | 3.583566e-52 | -8.615850e-47 |
| Msa0376910 | Msa0832600 | 0.802693 | 4.969631e-49 | -8.615850e-47 |
| Msa0389910 | Msa0832600 | 0.805746 | 1.150248e-49 | -8.615850e-47 |
| Msa0395980 | Msa0832600 | 0.833038 | 6.708314e-56 | -8.615850e-47 |
| Msa0401560 | Msa0832600 | 0.824015 | 1.014491e-53 | -8.615850e-47 |
| Msa0414140 | Msa0832600 | 0.802764 | 4.806138e-49 | -8.615850e-47 |
| Msa0432160 | Msa0832600 | 0.806587 | 7.652803e-50 | -8.615850e-47 |
| Msa0440510 | Msa0832600 | 0.812773 | 3.581605e-51 | -8.615850e-47 |
| Msa0471900 | Msa0832600 | 0.802695 | 4.965583e-49 | -8.615850e-47 |
| Msa0476680 | Msa0832600 | 0.810330 | 1.215936e-50 | -8.615850e-47 |
| Msa0240270 | Msa0832600 | 0.803486 | 3.406218e-49 | -8.615850e-47 |
| Msa0240900 | Msa0832600 | 0.800883 | 1.169138e-48 | -8.615850e-47 |
| Msa0241140 | Msa0832600 | 0.817040 | 4.051936e-52 | -8.615850e-47 |
| Msa0244970 | Msa0832600 | 0.813012 | 3.174827e-51 | -8.615850e-47 |
| Msa0249310 | Msa0832600 | 0.812409 | 4.301803e-51 | -8.615850e-47 |
| Msa0283420 | Msa0832600 | 0.826002 | 3.445356e-54 | -8.615850e-47 |
| Msa0286670 | Msa0832600 | 0.802199 | 6.281938e-49 | -8.615850e-47 |
| Msa0287790 | Msa0832600 | 0.823872 | 1.096295e-53 | -8.615850e-47 |
| Msa0296790 | Msa0832600 | 0.803320 | 3.687540e-49 | -8.615850e-47 |
| Msa0307960 | Msa0832600 | 0.814255 | 1.691031e-51 | -8.615850e-47 |
| Msa0308440 | Msa0832600 | 0.800870 | 1.176480e-48 | -8.615850e-47 |
| Msa0317970 | Msa0832600 | 0.800947 | 1.134457e-48 | -8.615850e-47 |
| Msa0321690 | Msa0832600 | 0.837994 | 3.742458e-57 | -8.615850e-47 |
| Msa0339910 | Msa0832600 | 0.804972 | 1.671035e-49 | -8.615850e-47 |
| Msa0342010 | Msa0832600 | 0.804378 | 2.223110e-49 | -8.615850e-47 |
| Msa0348530 | Msa0832600 | 0.808205 | 3.471611e-50 | -8.615850e-47 |
| Msa0362890 | Msa0832600 | 0.816319 | 5.879981e-52 | -8.615850e-47 |
| Msa0482940 | Msa0832600 | 0.801818 | 7.523176e-49 | -8.615850e-47 |
| Msa0491000 | Msa0832600 | 0.823379 | 1.429589e-53 | -8.615850e-47 |
| Msa0518170 | Msa0832600 | 0.801945 | 7.085346e-49 | -8.615850e-47 |
| Msa0521010 | Msa0832600 | 0.812384 | 4.355628e-51 | -8.615850e-47 |
| Msa0558370 | Msa0832600 | 0.805050 | 1.609374e-49 | -8.615850e-47 |
| Msa0594920 | Msa0832600 | 0.809176 | 2.153000e-50 | -8.615850e-47 |
| Msa0601950 | Msa0832600 | 0.800768 | 1.234103e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832600 | MtrunA17_Chr5g0397781 | 95.694 | 209 | 9 | 0 | 1 | 209 | 1 | 209 | 5.08e-133 | 372 |
| Msa0832600 | MtrunA17_Chr8g0386521 | 50.538 | 186 | 88 | 2 | 28 | 209 | 15 | 200 | 2.26e-55 | 175 |
| Msa0832600 | MtrunA17_Chr1g0203401 | 57.937 | 126 | 53 | 0 | 82 | 207 | 84 | 209 | 3.14e-45 | 149 |
| Msa0832600 | MtrunA17_Chr8g0349271 | 59.524 | 126 | 51 | 0 | 82 | 207 | 75 | 200 | 3.87e-44 | 146 |
| Msa0832600 | MtrunA17_Chr7g0247121 | 50.769 | 65 | 32 | 0 | 143 | 207 | 34 | 98 | 1.34e-15 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0832600 | AT5G23750.3 | 60.317 | 126 | 50 | 0 | 82 | 207 | 104 | 229 | 4.75e-49 | 160 |
| Msa0832600 | AT5G23750.2 | 60.317 | 126 | 50 | 0 | 82 | 207 | 76 | 201 | 5.60e-49 | 159 |
| Msa0832600 | AT5G23750.1 | 60.317 | 126 | 50 | 0 | 82 | 207 | 77 | 202 | 7.40e-49 | 158 |
| Msa0832600 | AT3G48940.1 | 57.937 | 126 | 53 | 0 | 82 | 207 | 50 | 175 | 1.46e-44 | 147 |
| Msa0832600 | AT3G61260.1 | 56.154 | 130 | 57 | 0 | 78 | 207 | 83 | 212 | 7.54e-44 | 146 |
| Msa0832600 | AT2G45820.1 | 58.519 | 135 | 56 | 0 | 73 | 207 | 56 | 190 | 3.97e-40 | 135 |
| Msa0832600 | AT1G63295.1 | 40.625 | 128 | 73 | 2 | 83 | 207 | 24 | 151 | 7.65e-21 | 85.1 |
| Msa0832600 | AT1G63295.2 | 43.243 | 111 | 63 | 0 | 83 | 193 | 64 | 174 | 2.33e-20 | 85.1 |
| Msa0832600 | AT4G00670.1 | 37.963 | 108 | 66 | 1 | 101 | 207 | 16 | 123 | 1.49e-17 | 75.9 |
Find 46 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAATCTTCTGTTGGATTA+TGG | 0.203365 | 5_4:+5683105 | Msa0832600:CDS |
| AATGCTTATGTTATTGATAA+TGG | 0.221487 | 5_4:-5683851 | None:intergenic |
| AAGCATGCAAACAATTTCTT+TGG | 0.279239 | 5_4:-5683665 | None:intergenic |
| GAAGAAAACTGAATTCTTGA+TGG | 0.311064 | 5_4:+5683717 | Msa0832600:three_prime_UTR |
| AGGGGATCATGATGATAAAA+AGG | 0.323089 | 5_4:+5682794 | Msa0832600:CDS |
| GCAATCTTCTGTTGGATTAT+GGG | 0.326593 | 5_4:+5683106 | Msa0832600:CDS |
| AAAAGACAAAGGCAGAAAAT+AGG | 0.344478 | 5_4:+5682992 | Msa0832600:CDS |
| AGATGATCATGCTGGTAATA+AGG | 0.356783 | 5_4:+5682767 | Msa0832600:CDS |
| CATGCTGGTAATAAGGAAAC+AGG | 0.363454 | 5_4:+5682774 | Msa0832600:CDS |
| GGGGAAAGCTCTTCAGGAAC+AGG | 0.393746 | 5_4:-5681934 | None:intergenic |
| GCTTTCCCCTGTTGTGGAAA+AGG | 0.394410 | 5_4:+5681948 | Msa0832600:CDS |
| AAACTGAATTCTTGATGGAT+TGG | 0.403172 | 5_4:+5683722 | Msa0832600:three_prime_UTR |
| ACAACAGGGGAAAGCTCTTC+AGG | 0.423226 | 5_4:-5681940 | None:intergenic |
| ACCACAGCTACAGTCTCTTC+TGG | 0.424564 | 5_4:+5681909 | Msa0832600:CDS |
| TGGCCTGCTGAGTAGGCTCC+TGG | 0.430478 | 5_4:-5682002 | None:intergenic |
| TGAAGAGCTTTCCCCTGTTG+TGG | 0.460075 | 5_4:+5681942 | Msa0832600:CDS |
| TACAAGAAGCAATCTTCTGT+TGG | 0.476983 | 5_4:+5683098 | Msa0832600:CDS |
| AAGCAAGAAATCATCTATAG+AGG | 0.477360 | 5_4:+5683133 | Msa0832600:CDS |
| TGATTCAGTCTTGTTGATGC+TGG | 0.478635 | 5_4:-5681887 | None:intergenic |
| AATTGTAGCAGAGAAAAGAT+TGG | 0.480532 | 5_4:+5682942 | Msa0832600:CDS |
| TTCTGTTCTGTTATGTTCTG+CGG | 0.503284 | 5_4:-5681839 | None:intergenic |
| ATTGGCTTTAATTAAAGCAT+GGG | 0.513985 | 5_4:+5682960 | Msa0832600:CDS |
| GATTGGCTTTAATTAAAGCA+TGG | 0.523135 | 5_4:+5682959 | Msa0832600:CDS |
| CAGCCAGGAGCCTACTCAGC+AGG | 0.535469 | 5_4:+5681999 | Msa0832600:CDS |
| GTTGAGATGGCCTGCTGAGT+AGG | 0.537629 | 5_4:-5682009 | None:intergenic |
| CTGATCATCAAGTGTTGAGA+TGG | 0.554532 | 5_4:-5682022 | None:intergenic |
| GGCACAACTCAAGAAATTTG+AGG | 0.555597 | 5_4:+5683154 | Msa0832600:CDS |
| TAACAGAACAGAACAAGTCA+TGG | 0.567812 | 5_4:+5681849 | Msa0832600:exon |
| CTGAAAACTTAGTTATGACA+AGG | 0.584476 | 5_4:-5681798 | None:intergenic |
| AACTTAGTTATGACAAGGGT+AGG | 0.585109 | 5_4:-5681793 | None:intergenic |
| GGAAGAATGTCTGGAGCTAG+AGG | 0.585162 | 5_4:+5683607 | Msa0832600:CDS |
| ATGTTATTGATAATGGAATG+TGG | 0.588270 | 5_4:-5683844 | None:intergenic |
| ATTTCTTTGGTGCAACTCCA+CGG | 0.591194 | 5_4:-5683652 | None:intergenic |
| AAGCAATATCAGTATCAGCC+AGG | 0.592102 | 5_4:+5681984 | Msa0832600:CDS |
| GCTGCAAAGTTTCGTAGCCG+TGG | 0.595886 | 5_4:+5683635 | Msa0832600:CDS |
| ATCTTCTGTTGGATTATGGG+AGG | 0.596122 | 5_4:+5683109 | Msa0832600:CDS |
| GAGGTTGCAGATGATCATGC+TGG | 0.615505 | 5_4:+5682759 | Msa0832600:intron |
| AACAGAACAGAACAAGTCAT+GGG | 0.617130 | 5_4:+5681850 | Msa0832600:exon |
| CAAGTCATGGGAGAATCAGA+AGG | 0.618923 | 5_4:+5681862 | Msa0832600:exon |
| TCCAGAAGAGACTGTAGCTG+TGG | 0.625821 | 5_4:-5681910 | None:intergenic |
| ATGCTGGTAATAAGGAAACA+GGG | 0.632785 | 5_4:+5682775 | Msa0832600:CDS |
| TGCTGGTAATAAGGAAACAG+GGG | 0.640080 | 5_4:+5682776 | Msa0832600:CDS |
| GGAAGAAAGTGAAAAGACAA+AGG | 0.645779 | 5_4:+5682981 | Msa0832600:CDS |
| GGGAAAGCTCTTCAGGAACA+GGG | 0.646598 | 5_4:-5681933 | None:intergenic |
| GCTAAGGGCTCAACTGACAG+AGG | 0.669431 | 5_4:+5682819 | Msa0832600:CDS |
| TGAAAACTTAGTTATGACAA+GGG | 0.676390 | 5_4:-5681797 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTATTAGTTATTATTTA+TGG | + | chr5_4:5683177-5683196 | Msa0832600:intron | 10.0% |
| !!! | ACAAAATTGTTTTAAATAAT+AGG | + | chr5_4:5683475-5683494 | Msa0832600:intron | 10.0% |
| !!! | TTTTAAATAATAGGAAAATT+TGG | + | chr5_4:5683484-5683503 | Msa0832600:intron | 10.0% |
| !! | TGATTATTAGTTATTATTTA+TGG | + | chr5_4:5683177-5683196 | Msa0832600:intron | 10.0% |
| !!! | ACAAAATTGTTTTAAATAAT+AGG | + | chr5_4:5683475-5683494 | Msa0832600:intron | 10.0% |
| !!! | TTTTAAATAATAGGAAAATT+TGG | + | chr5_4:5683484-5683503 | Msa0832600:intron | 10.0% |
| !! | TATCGTATTTATAGTTAATA+TGG | + | chr5_4:5682579-5682598 | Msa0832600:intron | 15.0% |
| !!! | TATTTTATATGAGTAAGAAT+GGG | - | chr5_4:5683024-5683043 | None:intergenic | 15.0% |
| !!! | ATATTTTATATGAGTAAGAA+TGG | - | chr5_4:5683025-5683044 | None:intergenic | 15.0% |
| !! | TATCGTATTTATAGTTAATA+TGG | + | chr5_4:5682579-5682598 | Msa0832600:intron | 15.0% |
| !!! | TATTTTATATGAGTAAGAAT+GGG | - | chr5_4:5683024-5683043 | None:intergenic | 15.0% |
| !!! | ATATTTTATATGAGTAAGAA+TGG | - | chr5_4:5683025-5683044 | None:intergenic | 15.0% |
| !!! | CTATCTTGTTTAAATTGTTA+AGG | + | chr5_4:5682376-5682395 | Msa0832600:intron | 20.0% |
| !!! | GTTAATATGGAATTTTTTTG+AGG | + | chr5_4:5682592-5682611 | Msa0832600:intron | 20.0% |
| !!! | GTTTTAGACTTCAAAATTTT+AGG | - | chr5_4:5682629-5682648 | None:intergenic | 20.0% |
| !!! | CTTTTTTGTTTTGTTTTGTT+TGG | + | chr5_4:5683207-5683226 | Msa0832600:intron | 20.0% |
| !!! | ATTTTGTAAGTTACAAATGA+GGG | - | chr5_4:5683462-5683481 | None:intergenic | 20.0% |
| !!! | AATTTTGTAAGTTACAAATG+AGG | - | chr5_4:5683463-5683482 | None:intergenic | 20.0% |
| !!! | AATTCAGTTTTCTTCTTATT+TGG | - | chr5_4:5683712-5683731 | None:intergenic | 20.0% |
| !!! | TTATGTATACTTTTAAAGTG+TGG | + | chr5_4:5683762-5683781 | Msa0832600:three_prime_UTR | 20.0% |
| !! | AATGCTTATGTTATTGATAA+TGG | - | chr5_4:5683854-5683873 | None:intergenic | 20.0% |
| !!! | CTATCTTGTTTAAATTGTTA+AGG | + | chr5_4:5682376-5682395 | Msa0832600:intron | 20.0% |
| !!! | GTTAATATGGAATTTTTTTG+AGG | + | chr5_4:5682592-5682611 | Msa0832600:intron | 20.0% |
| !!! | GTTTTAGACTTCAAAATTTT+AGG | - | chr5_4:5682629-5682648 | None:intergenic | 20.0% |
| !!! | CTTTTTTGTTTTGTTTTGTT+TGG | + | chr5_4:5683207-5683226 | Msa0832600:intron | 20.0% |
| !!! | ATTTTGTAAGTTACAAATGA+GGG | - | chr5_4:5683462-5683481 | None:intergenic | 20.0% |
| !!! | AATTTTGTAAGTTACAAATG+AGG | - | chr5_4:5683463-5683482 | None:intergenic | 20.0% |
| !!! | AATTCAGTTTTCTTCTTATT+TGG | - | chr5_4:5683712-5683731 | None:intergenic | 20.0% |
| !!! | TTATGTATACTTTTAAAGTG+TGG | + | chr5_4:5683762-5683781 | Msa0832600:three_prime_UTR | 20.0% |
| !! | AATGCTTATGTTATTGATAA+TGG | - | chr5_4:5683854-5683873 | None:intergenic | 20.0% |
| ! | TGAAAACTTAGTTATGACAA+GGG | - | chr5_4:5681800-5681819 | None:intergenic | 25.0% |
| ! | TTTAAGCCTCCAAATATATT+AGG | - | chr5_4:5682418-5682437 | None:intergenic | 25.0% |
| !!! | CCTCATATTTTATTTGTTCT+AGG | - | chr5_4:5682509-5682528 | None:intergenic | 25.0% |
| ! | CCTAGAACAAATAAAATATG+AGG | + | chr5_4:5682506-5682525 | Msa0832600:intron | 25.0% |
| ! | AGCTTAATTGTTTAGAAAGA+AGG | - | chr5_4:5682532-5682551 | None:intergenic | 25.0% |
| !! | TCATCATATTTTTCATACAG+AGG | + | chr5_4:5682740-5682759 | Msa0832600:intron | 25.0% |
| !!! | ATTGGCTTTAATTAAAGCAT+GGG | + | chr5_4:5682960-5682979 | Msa0832600:CDS | 25.0% |
| !!! | GTTTTGTTTGGTTGTAAATT+AGG | + | chr5_4:5683219-5683238 | Msa0832600:intron | 25.0% |
| ! | TCTAGTATAACTAAGGTTTA+GGG | - | chr5_4:5683358-5683377 | None:intergenic | 25.0% |
| ! | TTCTAGTATAACTAAGGTTT+AGG | - | chr5_4:5683359-5683378 | None:intergenic | 25.0% |
| ! | AATAGTTGAAGCTCAAAAAA+GGG | + | chr5_4:5683586-5683605 | Msa0832600:CDS | 25.0% |
| !!! | ATGTTATTGATAATGGAATG+TGG | - | chr5_4:5683847-5683866 | None:intergenic | 25.0% |
| ! | TGAAAACTTAGTTATGACAA+GGG | - | chr5_4:5681800-5681819 | None:intergenic | 25.0% |
| ! | TTTAAGCCTCCAAATATATT+AGG | - | chr5_4:5682418-5682437 | None:intergenic | 25.0% |
| !!! | CCTCATATTTTATTTGTTCT+AGG | - | chr5_4:5682509-5682528 | None:intergenic | 25.0% |
| ! | CCTAGAACAAATAAAATATG+AGG | + | chr5_4:5682506-5682525 | Msa0832600:intron | 25.0% |
| ! | AGCTTAATTGTTTAGAAAGA+AGG | - | chr5_4:5682532-5682551 | None:intergenic | 25.0% |
| !! | TCATCATATTTTTCATACAG+AGG | + | chr5_4:5682740-5682759 | Msa0832600:intron | 25.0% |
| !!! | ATTGGCTTTAATTAAAGCAT+GGG | + | chr5_4:5682960-5682979 | Msa0832600:CDS | 25.0% |
| !!! | GTTTTGTTTGGTTGTAAATT+AGG | + | chr5_4:5683219-5683238 | Msa0832600:intron | 25.0% |
| ! | TCTAGTATAACTAAGGTTTA+GGG | - | chr5_4:5683358-5683377 | None:intergenic | 25.0% |
| ! | TTCTAGTATAACTAAGGTTT+AGG | - | chr5_4:5683359-5683378 | None:intergenic | 25.0% |
| ! | AATAGTTGAAGCTCAAAAAA+GGG | + | chr5_4:5683586-5683605 | Msa0832600:CDS | 25.0% |
| !!! | ATGTTATTGATAATGGAATG+TGG | - | chr5_4:5683847-5683866 | None:intergenic | 25.0% |
| CTGAAAACTTAGTTATGACA+AGG | - | chr5_4:5681801-5681820 | None:intergenic | 30.0% | |
| ! | CTTGTCATAACTAAGTTTTC+AGG | + | chr5_4:5681799-5681818 | Msa0832600:five_prime_UTR | 30.0% |
| AAATTGTTAAGGTCATTGTC+AGG | + | chr5_4:5682387-5682406 | Msa0832600:intron | 30.0% | |
| AATTGTTAAGGTCATTGTCA+GGG | + | chr5_4:5682388-5682407 | Msa0832600:intron | 30.0% | |
| ! | TGAAGTCTAAAACCTTAACT+TGG | + | chr5_4:5682636-5682655 | Msa0832600:intron | 30.0% |
| ! | GAAGTCTAAAACCTTAACTT+GGG | + | chr5_4:5682637-5682656 | Msa0832600:intron | 30.0% |
| TGATGATAAAAAGGATGCTA+AGG | + | chr5_4:5682803-5682822 | Msa0832600:CDS | 30.0% | |
| GATGATAAAAAGGATGCTAA+GGG | + | chr5_4:5682804-5682823 | Msa0832600:CDS | 30.0% | |
| ! | ATTTTGTTGCATTAGATGCT+GGG | + | chr5_4:5682911-5682930 | Msa0832600:intron | 30.0% |
| AATTGTAGCAGAGAAAAGAT+TGG | + | chr5_4:5682942-5682961 | Msa0832600:CDS | 30.0% | |
| !! | GATTGGCTTTAATTAAAGCA+TGG | + | chr5_4:5682959-5682978 | Msa0832600:CDS | 30.0% |
| AAAAGACAAAGGCAGAAAAT+AGG | + | chr5_4:5682992-5683011 | Msa0832600:CDS | 30.0% | |
| AAGCAAGAAATCATCTATAG+AGG | + | chr5_4:5683133-5683152 | Msa0832600:CDS | 30.0% | |
| GATCTCTTCTAGTATAACTA+AGG | - | chr5_4:5683365-5683384 | None:intergenic | 30.0% | |
| GATGAATAAAGTGAGATTGT+GGG | - | chr5_4:5683403-5683422 | None:intergenic | 30.0% | |
| TGATGAATAAAGTGAGATTG+TGG | - | chr5_4:5683404-5683423 | None:intergenic | 30.0% | |
| CAATAGTTGAAGCTCAAAAA+AGG | + | chr5_4:5683585-5683604 | Msa0832600:CDS | 30.0% | |
| AAGCATGCAAACAATTTCTT+TGG | - | chr5_4:5683668-5683687 | None:intergenic | 30.0% | |
| GAAGAAAACTGAATTCTTGA+TGG | + | chr5_4:5683717-5683736 | Msa0832600:three_prime_UTR | 30.0% | |
| ! | AAACTGAATTCTTGATGGAT+TGG | + | chr5_4:5683722-5683741 | Msa0832600:three_prime_UTR | 30.0% |
| CTGAAAACTTAGTTATGACA+AGG | - | chr5_4:5681801-5681820 | None:intergenic | 30.0% | |
| ! | CTTGTCATAACTAAGTTTTC+AGG | + | chr5_4:5681799-5681818 | Msa0832600:five_prime_UTR | 30.0% |
| AAATTGTTAAGGTCATTGTC+AGG | + | chr5_4:5682387-5682406 | Msa0832600:intron | 30.0% | |
| AATTGTTAAGGTCATTGTCA+GGG | + | chr5_4:5682388-5682407 | Msa0832600:intron | 30.0% | |
| ! | TGAAGTCTAAAACCTTAACT+TGG | + | chr5_4:5682636-5682655 | Msa0832600:intron | 30.0% |
| ! | GAAGTCTAAAACCTTAACTT+GGG | + | chr5_4:5682637-5682656 | Msa0832600:intron | 30.0% |
| TGATGATAAAAAGGATGCTA+AGG | + | chr5_4:5682803-5682822 | Msa0832600:CDS | 30.0% | |
| GATGATAAAAAGGATGCTAA+GGG | + | chr5_4:5682804-5682823 | Msa0832600:CDS | 30.0% | |
| ! | ATTTTGTTGCATTAGATGCT+GGG | + | chr5_4:5682911-5682930 | Msa0832600:intron | 30.0% |
| AATTGTAGCAGAGAAAAGAT+TGG | + | chr5_4:5682942-5682961 | Msa0832600:CDS | 30.0% | |
| !! | GATTGGCTTTAATTAAAGCA+TGG | + | chr5_4:5682959-5682978 | Msa0832600:CDS | 30.0% |
| AAAAGACAAAGGCAGAAAAT+AGG | + | chr5_4:5682992-5683011 | Msa0832600:CDS | 30.0% | |
| AAGCAAGAAATCATCTATAG+AGG | + | chr5_4:5683133-5683152 | Msa0832600:CDS | 30.0% | |
| GATCTCTTCTAGTATAACTA+AGG | - | chr5_4:5683365-5683384 | None:intergenic | 30.0% | |
| GATGAATAAAGTGAGATTGT+GGG | - | chr5_4:5683403-5683422 | None:intergenic | 30.0% | |
| TGATGAATAAAGTGAGATTG+TGG | - | chr5_4:5683404-5683423 | None:intergenic | 30.0% | |
| CAATAGTTGAAGCTCAAAAA+AGG | + | chr5_4:5683585-5683604 | Msa0832600:CDS | 30.0% | |
| AAGCATGCAAACAATTTCTT+TGG | - | chr5_4:5683668-5683687 | None:intergenic | 30.0% | |
| GAAGAAAACTGAATTCTTGA+TGG | + | chr5_4:5683717-5683736 | Msa0832600:three_prime_UTR | 30.0% | |
| ! | AAACTGAATTCTTGATGGAT+TGG | + | chr5_4:5683722-5683741 | Msa0832600:three_prime_UTR | 30.0% |
| AACTTAGTTATGACAAGGGT+AGG | - | chr5_4:5681796-5681815 | None:intergenic | 35.0% | |
| TTCTGTTCTGTTATGTTCTG+CGG | - | chr5_4:5681842-5681861 | None:intergenic | 35.0% | |
| TAACAGAACAGAACAAGTCA+TGG | + | chr5_4:5681849-5681868 | Msa0832600:exon | 35.0% | |
| AACAGAACAGAACAAGTCAT+GGG | + | chr5_4:5681850-5681869 | Msa0832600:exon | 35.0% | |
| AGCCTCCAAATATATTAGGT+CGG | - | chr5_4:5682414-5682433 | None:intergenic | 35.0% | |
| AGATGATCATGCTGGTAATA+AGG | + | chr5_4:5682767-5682786 | Msa0832600:CDS | 35.0% | |
| ATGCTGGTAATAAGGAAACA+GGG | + | chr5_4:5682775-5682794 | Msa0832600:CDS | 35.0% | |
| AGGGGATCATGATGATAAAA+AGG | + | chr5_4:5682794-5682813 | Msa0832600:CDS | 35.0% | |
| ! | CATTTTGTTGCATTAGATGC+TGG | + | chr5_4:5682910-5682929 | Msa0832600:intron | 35.0% |
| GGAAGAAAGTGAAAAGACAA+AGG | + | chr5_4:5682981-5683000 | Msa0832600:CDS | 35.0% | |
| GAGCTTGATGAAAGATGAAA+TGG | + | chr5_4:5683063-5683082 | Msa0832600:intron | 35.0% | |
| TACAAGAAGCAATCTTCTGT+TGG | + | chr5_4:5683098-5683117 | Msa0832600:CDS | 35.0% | |
| AGCAATCTTCTGTTGGATTA+TGG | + | chr5_4:5683105-5683124 | Msa0832600:CDS | 35.0% | |
| GCAATCTTCTGTTGGATTAT+GGG | + | chr5_4:5683106-5683125 | Msa0832600:CDS | 35.0% | |
| TCAAAAAAGGGAAGAATGTC+TGG | + | chr5_4:5683598-5683617 | Msa0832600:CDS | 35.0% | |
| AACTTAGTTATGACAAGGGT+AGG | - | chr5_4:5681796-5681815 | None:intergenic | 35.0% | |
| TTCTGTTCTGTTATGTTCTG+CGG | - | chr5_4:5681842-5681861 | None:intergenic | 35.0% | |
| TAACAGAACAGAACAAGTCA+TGG | + | chr5_4:5681849-5681868 | Msa0832600:exon | 35.0% | |
| AACAGAACAGAACAAGTCAT+GGG | + | chr5_4:5681850-5681869 | Msa0832600:exon | 35.0% | |
| AGCCTCCAAATATATTAGGT+CGG | - | chr5_4:5682414-5682433 | None:intergenic | 35.0% | |
| AGATGATCATGCTGGTAATA+AGG | + | chr5_4:5682767-5682786 | Msa0832600:CDS | 35.0% | |
| ATGCTGGTAATAAGGAAACA+GGG | + | chr5_4:5682775-5682794 | Msa0832600:CDS | 35.0% | |
| AGGGGATCATGATGATAAAA+AGG | + | chr5_4:5682794-5682813 | Msa0832600:CDS | 35.0% | |
| ! | CATTTTGTTGCATTAGATGC+TGG | + | chr5_4:5682910-5682929 | Msa0832600:intron | 35.0% |
| GGAAGAAAGTGAAAAGACAA+AGG | + | chr5_4:5682981-5683000 | Msa0832600:CDS | 35.0% | |
| GAGCTTGATGAAAGATGAAA+TGG | + | chr5_4:5683063-5683082 | Msa0832600:intron | 35.0% | |
| TACAAGAAGCAATCTTCTGT+TGG | + | chr5_4:5683098-5683117 | Msa0832600:CDS | 35.0% | |
| AGCAATCTTCTGTTGGATTA+TGG | + | chr5_4:5683105-5683124 | Msa0832600:CDS | 35.0% | |
| GCAATCTTCTGTTGGATTAT+GGG | + | chr5_4:5683106-5683125 | Msa0832600:CDS | 35.0% | |
| TCAAAAAAGGGAAGAATGTC+TGG | + | chr5_4:5683598-5683617 | Msa0832600:CDS | 35.0% | |
| !! | TGATTCAGTCTTGTTGATGC+TGG | - | chr5_4:5681890-5681909 | None:intergenic | 40.0% |
| ! | TGATTCCTTTTCCACAACAG+GGG | - | chr5_4:5681956-5681975 | None:intergenic | 40.0% |
| ! | CTGATTCCTTTTCCACAACA+GGG | - | chr5_4:5681957-5681976 | None:intergenic | 40.0% |
| ! | TCTGATTCCTTTTCCACAAC+AGG | - | chr5_4:5681958-5681977 | None:intergenic | 40.0% |
| AAGCAATATCAGTATCAGCC+AGG | + | chr5_4:5681984-5682003 | Msa0832600:CDS | 40.0% | |
| !! | CTGATCATCAAGTGTTGAGA+TGG | - | chr5_4:5682025-5682044 | None:intergenic | 40.0% |
| ! | AAACCTTAACTTGGGTTGCT+TGG | + | chr5_4:5682645-5682664 | Msa0832600:intron | 40.0% |
| AAAAGCTCATGCAGTGATCA+GGG | - | chr5_4:5682683-5682702 | None:intergenic | 40.0% | |
| CATGCTGGTAATAAGGAAAC+AGG | + | chr5_4:5682774-5682793 | Msa0832600:CDS | 40.0% | |
| TGCTGGTAATAAGGAAACAG+GGG | + | chr5_4:5682776-5682795 | Msa0832600:CDS | 40.0% | |
| ACAAAGGCAGAAAATAGGCA+AGG | + | chr5_4:5682997-5683016 | Msa0832600:intron | 40.0% | |
| ATCTTCTGTTGGATTATGGG+AGG | + | chr5_4:5683109-5683128 | Msa0832600:CDS | 40.0% | |
| GGCACAACTCAAGAAATTTG+AGG | + | chr5_4:5683154-5683173 | Msa0832600:CDS | 40.0% | |
| ! | ATTTCTTTGGTGCAACTCCA+CGG | - | chr5_4:5683655-5683674 | None:intergenic | 40.0% |
| TTAGTTATGACAAGGGTAGG+TGG | - | chr5_4:5681793-5681812 | None:intergenic | 40.0% | |
| !! | TGATTCAGTCTTGTTGATGC+TGG | - | chr5_4:5681890-5681909 | None:intergenic | 40.0% |
| ! | TGATTCCTTTTCCACAACAG+GGG | - | chr5_4:5681956-5681975 | None:intergenic | 40.0% |
| ! | CTGATTCCTTTTCCACAACA+GGG | - | chr5_4:5681957-5681976 | None:intergenic | 40.0% |
| ! | TCTGATTCCTTTTCCACAAC+AGG | - | chr5_4:5681958-5681977 | None:intergenic | 40.0% |
| AAGCAATATCAGTATCAGCC+AGG | + | chr5_4:5681984-5682003 | Msa0832600:CDS | 40.0% | |
| !! | CTGATCATCAAGTGTTGAGA+TGG | - | chr5_4:5682025-5682044 | None:intergenic | 40.0% |
| ! | AAACCTTAACTTGGGTTGCT+TGG | + | chr5_4:5682645-5682664 | Msa0832600:intron | 40.0% |
| AAAAGCTCATGCAGTGATCA+GGG | - | chr5_4:5682683-5682702 | None:intergenic | 40.0% | |
| CATGCTGGTAATAAGGAAAC+AGG | + | chr5_4:5682774-5682793 | Msa0832600:CDS | 40.0% | |
| TGCTGGTAATAAGGAAACAG+GGG | + | chr5_4:5682776-5682795 | Msa0832600:CDS | 40.0% | |
| ACAAAGGCAGAAAATAGGCA+AGG | + | chr5_4:5682997-5683016 | Msa0832600:intron | 40.0% | |
| ATCTTCTGTTGGATTATGGG+AGG | + | chr5_4:5683109-5683128 | Msa0832600:CDS | 40.0% | |
| GGCACAACTCAAGAAATTTG+AGG | + | chr5_4:5683154-5683173 | Msa0832600:CDS | 40.0% | |
| ! | ATTTCTTTGGTGCAACTCCA+CGG | - | chr5_4:5683655-5683674 | None:intergenic | 40.0% |
| CAAGTCATGGGAGAATCAGA+AGG | + | chr5_4:5681862-5681881 | Msa0832600:exon | 45.0% | |
| CAGGGCCGACCTAATATATT+TGG | + | chr5_4:5682406-5682425 | Msa0832600:intron | 45.0% | |
| GGCCGACCTAATATATTTGG+AGG | + | chr5_4:5682409-5682428 | Msa0832600:intron | 45.0% | |
| CAAAAGCTCATGCAGTGATC+AGG | - | chr5_4:5682684-5682703 | None:intergenic | 45.0% | |
| AAAGATGAAATGGTCGCGCA+GGG | + | chr5_4:5683073-5683092 | Msa0832600:intron | 45.0% | |
| CGACACATTTCAGTTCCACA+AGG | - | chr5_4:5683282-5683301 | None:intergenic | 45.0% | |
| CGAACTTGTGCATGTAACAG+AGG | - | chr5_4:5683327-5683346 | None:intergenic | 45.0% | |
| CAAGTCATGGGAGAATCAGA+AGG | + | chr5_4:5681862-5681881 | Msa0832600:exon | 45.0% | |
| CAGGGCCGACCTAATATATT+TGG | + | chr5_4:5682406-5682425 | Msa0832600:intron | 45.0% | |
| GGCCGACCTAATATATTTGG+AGG | + | chr5_4:5682409-5682428 | Msa0832600:intron | 45.0% | |
| CAAAAGCTCATGCAGTGATC+AGG | - | chr5_4:5682684-5682703 | None:intergenic | 45.0% | |
| AAAGATGAAATGGTCGCGCA+GGG | + | chr5_4:5683073-5683092 | Msa0832600:intron | 45.0% | |
| CGACACATTTCAGTTCCACA+AGG | - | chr5_4:5683282-5683301 | None:intergenic | 45.0% | |
| CGAACTTGTGCATGTAACAG+AGG | - | chr5_4:5683327-5683346 | None:intergenic | 45.0% | |
| ACCACAGCTACAGTCTCTTC+TGG | + | chr5_4:5681909-5681928 | Msa0832600:CDS | 50.0% | |
| TCCAGAAGAGACTGTAGCTG+TGG | - | chr5_4:5681913-5681932 | None:intergenic | 50.0% | |
| GGGAAAGCTCTTCAGGAACA+GGG | - | chr5_4:5681936-5681955 | None:intergenic | 50.0% | |
| ACAACAGGGGAAAGCTCTTC+AGG | - | chr5_4:5681943-5681962 | None:intergenic | 50.0% | |
| TGAAGAGCTTTCCCCTGTTG+TGG | + | chr5_4:5681942-5681961 | Msa0832600:CDS | 50.0% | |
| GCTTTCCCCTGTTGTGGAAA+AGG | + | chr5_4:5681948-5681967 | Msa0832600:CDS | 50.0% | |
| GAGGTTGCAGATGATCATGC+TGG | + | chr5_4:5682759-5682778 | Msa0832600:intron | 50.0% | |
| GAAAGATGAAATGGTCGCGC+AGG | + | chr5_4:5683072-5683091 | Msa0832600:intron | 50.0% | |
| GACAAATCTCTCGAGCCTTG+TGG | + | chr5_4:5683264-5683283 | Msa0832600:intron | 50.0% | |
| ! | GGAAGAATGTCTGGAGCTAG+AGG | + | chr5_4:5683607-5683626 | Msa0832600:CDS | 50.0% |
| ACCACAGCTACAGTCTCTTC+TGG | + | chr5_4:5681909-5681928 | Msa0832600:CDS | 50.0% | |
| TCCAGAAGAGACTGTAGCTG+TGG | - | chr5_4:5681913-5681932 | None:intergenic | 50.0% | |
| GGGAAAGCTCTTCAGGAACA+GGG | - | chr5_4:5681936-5681955 | None:intergenic | 50.0% | |
| ACAACAGGGGAAAGCTCTTC+AGG | - | chr5_4:5681943-5681962 | None:intergenic | 50.0% | |
| TGAAGAGCTTTCCCCTGTTG+TGG | + | chr5_4:5681942-5681961 | Msa0832600:CDS | 50.0% | |
| GCTTTCCCCTGTTGTGGAAA+AGG | + | chr5_4:5681948-5681967 | Msa0832600:CDS | 50.0% | |
| GAGGTTGCAGATGATCATGC+TGG | + | chr5_4:5682759-5682778 | Msa0832600:intron | 50.0% | |
| GAAAGATGAAATGGTCGCGC+AGG | + | chr5_4:5683072-5683091 | Msa0832600:intron | 50.0% | |
| GACAAATCTCTCGAGCCTTG+TGG | + | chr5_4:5683264-5683283 | Msa0832600:intron | 50.0% | |
| ! | GGAAGAATGTCTGGAGCTAG+AGG | + | chr5_4:5683607-5683626 | Msa0832600:CDS | 50.0% |
| GGGGAAAGCTCTTCAGGAAC+AGG | - | chr5_4:5681937-5681956 | None:intergenic | 55.0% | |
| GTTGAGATGGCCTGCTGAGT+AGG | - | chr5_4:5682012-5682031 | None:intergenic | 55.0% | |
| GGGCCAAGCAACCCAAGTTA+AGG | - | chr5_4:5682651-5682670 | None:intergenic | 55.0% | |
| ! | AACTTGGGTTGCTTGGCCCT+TGG | + | chr5_4:5682652-5682671 | Msa0832600:intron | 55.0% |
| ! | ACTTGGGTTGCTTGGCCCTT+GGG | + | chr5_4:5682653-5682672 | Msa0832600:intron | 55.0% |
| !! | AGTGATCAGGGTTGGCCCAA+GGG | - | chr5_4:5682671-5682690 | None:intergenic | 55.0% |
| GCTCATGCAGTGATCAGGGT+TGG | - | chr5_4:5682679-5682698 | None:intergenic | 55.0% | |
| GCTAAGGGCTCAACTGACAG+AGG | + | chr5_4:5682819-5682838 | Msa0832600:CDS | 55.0% | |
| GCTGCAAAGTTTCGTAGCCG+TGG | + | chr5_4:5683635-5683654 | Msa0832600:CDS | 55.0% | |
| GGGGAAAGCTCTTCAGGAAC+AGG | - | chr5_4:5681937-5681956 | None:intergenic | 55.0% | |
| GTTGAGATGGCCTGCTGAGT+AGG | - | chr5_4:5682012-5682031 | None:intergenic | 55.0% | |
| GGGCCAAGCAACCCAAGTTA+AGG | - | chr5_4:5682651-5682670 | None:intergenic | 55.0% | |
| ! | AACTTGGGTTGCTTGGCCCT+TGG | + | chr5_4:5682652-5682671 | Msa0832600:intron | 55.0% |
| ! | ACTTGGGTTGCTTGGCCCTT+GGG | + | chr5_4:5682653-5682672 | Msa0832600:intron | 55.0% |
| !! | AGTGATCAGGGTTGGCCCAA+GGG | - | chr5_4:5682671-5682690 | None:intergenic | 55.0% |
| GCTCATGCAGTGATCAGGGT+TGG | - | chr5_4:5682679-5682698 | None:intergenic | 55.0% | |
| GCTAAGGGCTCAACTGACAG+AGG | + | chr5_4:5682819-5682838 | Msa0832600:CDS | 55.0% | |
| GCTGCAAAGTTTCGTAGCCG+TGG | + | chr5_4:5683635-5683654 | Msa0832600:CDS | 55.0% | |
| !! | CAGTGATCAGGGTTGGCCCA+AGG | - | chr5_4:5682672-5682691 | None:intergenic | 60.0% |
| !! | CAGTGATCAGGGTTGGCCCA+AGG | - | chr5_4:5682672-5682691 | None:intergenic | 60.0% |
| CAGCCAGGAGCCTACTCAGC+AGG | + | chr5_4:5681999-5682018 | Msa0832600:CDS | 65.0% | |
| TGGCCTGCTGAGTAGGCTCC+TGG | - | chr5_4:5682005-5682024 | None:intergenic | 65.0% | |
| CAGCCAGGAGCCTACTCAGC+AGG | + | chr5_4:5681999-5682018 | Msa0832600:CDS | 65.0% | |
| TGGCCTGCTGAGTAGGCTCC+TGG | - | chr5_4:5682005-5682024 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 5681791 | 5683883 | 5681791 | ID=Msa0832600;Name=Msa0832600 |
| chr5_4 | mRNA | 5681791 | 5683883 | 5681791 | ID=Msa0832600-mRNA-1;Parent=Msa0832600;Name=Msa0832600-mRNA-1;_AED=0.35;_eAED=0.35;_QI=77|0.8|0.66|1|0.8|0.66|6|165|209 |
| chr5_4 | exon | 5681791 | 5682045 | 5681791 | ID=Msa0832600-mRNA-1:exon:2462;Parent=Msa0832600-mRNA-1 |
| chr5_4 | exon | 5682760 | 5682840 | 5682760 | ID=Msa0832600-mRNA-1:exon:2463;Parent=Msa0832600-mRNA-1 |
| chr5_4 | exon | 5682926 | 5683013 | 5682926 | ID=Msa0832600-mRNA-1:exon:2464;Parent=Msa0832600-mRNA-1 |
| chr5_4 | exon | 5683094 | 5683175 | 5683094 | ID=Msa0832600-mRNA-1:exon:2465;Parent=Msa0832600-mRNA-1 |
| chr5_4 | exon | 5683497 | 5683793 | 5683497 | ID=Msa0832600-mRNA-1:exon:2466;Parent=Msa0832600-mRNA-1 |
| chr5_4 | exon | 5683815 | 5683883 | 5683815 | ID=Msa0832600-mRNA-1:exon:2467;Parent=Msa0832600-mRNA-1 |
| chr5_4 | five_prime_UTR | 5681791 | 5681867 | 5681791 | ID=Msa0832600-mRNA-1:five_prime_utr;Parent=Msa0832600-mRNA-1 |
| chr5_4 | CDS | 5681868 | 5682045 | 5681868 | ID=Msa0832600-mRNA-1:cds;Parent=Msa0832600-mRNA-1 |
| chr5_4 | CDS | 5682760 | 5682840 | 5682760 | ID=Msa0832600-mRNA-1:cds;Parent=Msa0832600-mRNA-1 |
| chr5_4 | CDS | 5682926 | 5683013 | 5682926 | ID=Msa0832600-mRNA-1:cds;Parent=Msa0832600-mRNA-1 |
| chr5_4 | CDS | 5683094 | 5683175 | 5683094 | ID=Msa0832600-mRNA-1:cds;Parent=Msa0832600-mRNA-1 |
| chr5_4 | CDS | 5683497 | 5683697 | 5683497 | ID=Msa0832600-mRNA-1:cds;Parent=Msa0832600-mRNA-1 |
| chr5_4 | three_prime_UTR | 5683698 | 5683793 | 5683698 | ID=Msa0832600-mRNA-1:three_prime_utr;Parent=Msa0832600-mRNA-1 |
| chr5_4 | three_prime_UTR | 5683815 | 5683883 | 5683815 | ID=Msa0832600-mRNA-1:three_prime_utr;Parent=Msa0832600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
