Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358070 | XP_003611121.1 | 95.694 | 209 | 9 | 0 | 1 | 209 | 1 | 209 | 5.52e-129 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358070 | sp|P93788|REMO_SOLTU | 48.691 | 191 | 92 | 4 | 20 | 207 | 11 | 198 | 8.95e-49 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358070 | G7KDE4 | 95.694 | 209 | 9 | 0 | 1 | 209 | 1 | 209 | 2.64e-129 | 372 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003400 | Msa1358070 | 0.808621 | 2.830664e-50 | -8.615850e-47 |
| Msa0010110 | Msa1358070 | 0.830731 | 2.489076e-55 | -8.615850e-47 |
| Msa0010770 | Msa1358070 | 0.810164 | 1.320943e-50 | -8.615850e-47 |
| Msa0031180 | Msa1358070 | 0.806864 | 6.685759e-50 | -8.615850e-47 |
| Msa0040620 | Msa1358070 | 0.804174 | 2.451727e-49 | -8.615850e-47 |
| Msa0046560 | Msa1358070 | 0.805208 | 1.491233e-49 | -8.615850e-47 |
| Msa0050820 | Msa1358070 | 0.819541 | 1.100222e-52 | -8.615850e-47 |
| Msa0054820 | Msa1358070 | 0.816124 | 6.501638e-52 | -8.615850e-47 |
| Msa0059840 | Msa1358070 | 0.804005 | 2.658303e-49 | -8.615850e-47 |
| Msa0078480 | Msa1358070 | 0.812627 | 3.854254e-51 | -8.615850e-47 |
| Msa0079130 | Msa1358070 | 0.823976 | 1.036203e-53 | -8.615850e-47 |
| Msa0081650 | Msa1358070 | 0.807826 | 4.181262e-50 | -8.615850e-47 |
| Msa0090550 | Msa1358070 | 0.816613 | 5.051961e-52 | -8.615850e-47 |
| Msa0100160 | Msa1358070 | 0.801886 | 7.285727e-49 | -8.615850e-47 |
| Msa0101830 | Msa1358070 | 0.802343 | 5.868987e-49 | -8.615850e-47 |
| Msa0104230 | Msa1358070 | 0.806026 | 1.004401e-49 | -8.615850e-47 |
| Msa0104670 | Msa1358070 | 0.834142 | 3.555141e-56 | -8.615850e-47 |
| Msa0104800 | Msa1358070 | 0.817952 | 2.524905e-52 | -8.615850e-47 |
| Msa0106620 | Msa1358070 | 0.828741 | 7.596987e-55 | -8.615850e-47 |
| Msa0106710 | Msa1358070 | 0.828489 | 8.739708e-55 | -8.615850e-47 |
| Msa1353470 | Msa1358070 | 0.827900 | 1.211480e-54 | -8.615850e-47 |
| Msa1357890 | Msa1358070 | 0.900425 | 7.420533e-78 | -8.615850e-47 |
| Msa1358070 | Msa1359560 | 0.806259 | 8.972420e-50 | -8.615850e-47 |
| Msa1358070 | Msa1368360 | 0.824738 | 6.859376e-54 | -8.615850e-47 |
| Msa1358070 | Msa1370590 | 0.818012 | 2.446856e-52 | -8.615850e-47 |
| Msa1358070 | Msa1384100 | 0.819775 | 9.727839e-53 | -8.615850e-47 |
| Msa1358070 | Msa1390700 | 0.803759 | 2.990561e-49 | -8.615850e-47 |
| Msa1358070 | Msa1392910 | 0.813614 | 2.341066e-51 | -8.615850e-47 |
| Msa1358070 | Msa1393120 | 0.822542 | 2.241150e-53 | -8.615850e-47 |
| Msa1358070 | Msa1398090 | 0.908489 | 1.617610e-81 | -8.615850e-47 |
| Msa1358070 | Msa1410420 | 0.803264 | 3.787811e-49 | -8.615850e-47 |
| Msa1358070 | Msa1423780 | 0.802143 | 6.453636e-49 | -8.615850e-47 |
| Msa1358070 | Msa1425260 | 0.803956 | 2.722062e-49 | -8.615850e-47 |
| Msa1358070 | Msa1426570 | 0.803902 | 2.792510e-49 | -8.615850e-47 |
| Msa1358070 | Msa1428780 | 0.803123 | 4.051243e-49 | -8.615850e-47 |
| Msa1358070 | Msa1437330 | 0.820599 | 6.298266e-53 | -8.615850e-47 |
| Msa1358070 | Msa1444120 | 0.818558 | 1.841116e-52 | -8.615850e-47 |
| Msa1358070 | Msa1446080 | 0.815086 | 1.107036e-51 | -8.615850e-47 |
| Msa1358070 | Msa1448490 | 0.800824 | 1.202133e-48 | -8.615850e-47 |
| Msa1358070 | Msa1454530 | 0.806511 | 7.939122e-50 | -8.615850e-47 |
| Msa1358070 | Msa1456230 | 0.813451 | 2.542884e-51 | -8.615850e-47 |
| Msa1358070 | Msa1463900 | 0.803292 | 3.737925e-49 | -8.615850e-47 |
| Msa0628420 | Msa1358070 | 0.803477 | 3.421049e-49 | -8.615850e-47 |
| Msa0640940 | Msa1358070 | 0.805098 | 1.572904e-49 | -8.615850e-47 |
| Msa0641730 | Msa1358070 | 0.814434 | 1.543625e-51 | -8.615850e-47 |
| Msa0661320 | Msa1358070 | 0.805866 | 1.085436e-49 | -8.615850e-47 |
| Msa0667740 | Msa1358070 | 0.803581 | 3.255556e-49 | -8.615850e-47 |
| Msa0679360 | Msa1358070 | 0.812330 | 4.476960e-51 | -8.615850e-47 |
| Msa0685090 | Msa1358070 | 0.800659 | 1.299251e-48 | -8.615850e-47 |
| Msa0704920 | Msa1358070 | 0.804532 | 2.065063e-49 | -8.615850e-47 |
| Msa0705990 | Msa1358070 | 0.805563 | 1.256572e-49 | -8.615850e-47 |
| Msa0709120 | Msa1358070 | 0.826890 | 2.116103e-54 | -8.615850e-47 |
| Msa0709160 | Msa1358070 | 0.817582 | 3.059934e-52 | -8.615850e-47 |
| Msa0721280 | Msa1358070 | 0.900957 | 4.354029e-78 | -8.615850e-47 |
| Msa0738030 | Msa1358070 | 0.828229 | 1.009567e-54 | -8.615850e-47 |
| Msa0753370 | Msa1358070 | 0.964810 | 8.469209e-124 | -8.615850e-47 |
| Msa0756380 | Msa1358070 | 0.827240 | 1.745245e-54 | -8.615850e-47 |
| Msa0763890 | Msa1358070 | 0.813004 | 3.187845e-51 | -8.615850e-47 |
| Msa0763920 | Msa1358070 | 0.816163 | 6.371079e-52 | -8.615850e-47 |
| Msa0789560 | Msa1358070 | 0.813051 | 3.112908e-51 | -8.615850e-47 |
| Msa0795360 | Msa1358070 | 0.927146 | 1.762760e-91 | -8.615850e-47 |
| Msa0795370 | Msa1358070 | 0.852883 | 3.446674e-61 | -8.615850e-47 |
| Msa0797770 | Msa1358070 | 0.803387 | 3.571685e-49 | -8.615850e-47 |
| Msa0811040 | Msa1358070 | 0.819909 | 9.065650e-53 | -8.615850e-47 |
| Msa0817460 | Msa1358070 | 0.834877 | 2.324439e-56 | -8.615850e-47 |
| Msa0832340 | Msa1358070 | 0.809943 | 1.473412e-50 | -8.615850e-47 |
| Msa0832600 | Msa1358070 | 0.977078 | 4.565289e-143 | -8.615850e-47 |
| Msa0835230 | Msa1358070 | 0.804884 | 1.743345e-49 | -8.615850e-47 |
| Msa0126790 | Msa1358070 | 0.818455 | 1.942837e-52 | -8.615850e-47 |
| Msa0127100 | Msa1358070 | 0.810272 | 1.251912e-50 | -8.615850e-47 |
| Msa0138210 | Msa1358070 | 0.802670 | 5.025556e-49 | -8.615850e-47 |
| Msa0138500 | Msa1358070 | 0.802793 | 4.740229e-49 | -8.615850e-47 |
| Msa0138520 | Msa1358070 | 0.801896 | 7.252064e-49 | -8.615850e-47 |
| Msa0139670 | Msa1358070 | 0.826961 | 2.034753e-54 | -8.615850e-47 |
| Msa0143850 | Msa1358070 | 0.808398 | 3.158093e-50 | -8.615850e-47 |
| Msa0144530 | Msa1358070 | 0.808493 | 3.014523e-50 | -8.615850e-47 |
| Msa0146540 | Msa1358070 | 0.806969 | 6.355263e-50 | -8.615850e-47 |
| Msa0150860 | Msa1358070 | 0.830687 | 2.552500e-55 | -8.615850e-47 |
| Msa0160960 | Msa1358070 | 0.826518 | 2.596360e-54 | -8.615850e-47 |
| Msa0168870 | Msa1358070 | 0.808397 | 3.160067e-50 | -8.615850e-47 |
| Msa0171870 | Msa1358070 | 0.815708 | 8.050512e-52 | -8.615850e-47 |
| Msa0173800 | Msa1358070 | 0.812453 | 4.207606e-51 | -8.615850e-47 |
| Msa0183420 | Msa1358070 | 0.819971 | 8.774773e-53 | -8.615850e-47 |
| Msa0202800 | Msa1358070 | 0.827034 | 1.955306e-54 | -8.615850e-47 |
| Msa0204960 | Msa1358070 | 0.832458 | 9.343899e-56 | -8.615850e-47 |
| Msa0205010 | Msa1358070 | 0.821651 | 3.604639e-53 | -8.615850e-47 |
| Msa0206830 | Msa1358070 | 0.820444 | 6.835661e-53 | -8.615850e-47 |
| Msa0207030 | Msa1358070 | 0.800973 | 1.120879e-48 | -8.615850e-47 |
| Msa0207350 | Msa1358070 | 0.801696 | 7.971974e-49 | -8.615850e-47 |
| Msa0218810 | Msa1358070 | 0.801538 | 8.590257e-49 | -8.615850e-47 |
| Msa0220730 | Msa1358070 | 0.801459 | 8.915469e-49 | -8.615850e-47 |
| Msa0223330 | Msa1358070 | 0.809460 | 1.871432e-50 | -8.615850e-47 |
| Msa0225220 | Msa1358070 | 0.818486 | 1.912132e-52 | -8.615850e-47 |
| Msa0230320 | Msa1358070 | 0.804453 | 2.144468e-49 | -8.615850e-47 |
| Msa1227150 | Msa1358070 | 0.818895 | 1.543461e-52 | -8.615850e-47 |
| Msa1234620 | Msa1358070 | 0.827666 | 1.379315e-54 | -8.615850e-47 |
| Msa1243870 | Msa1358070 | 0.823257 | 1.526361e-53 | -8.615850e-47 |
| Msa1258980 | Msa1358070 | 0.837356 | 5.455868e-57 | -8.615850e-47 |
| Msa1259640 | Msa1358070 | 0.805759 | 1.143015e-49 | -8.615850e-47 |
| Msa1262010 | Msa1358070 | 0.801016 | 1.098669e-48 | -8.615850e-47 |
| Msa1265590 | Msa1358070 | 0.800013 | 1.758886e-48 | -8.615850e-47 |
| Msa1270660 | Msa1358070 | 0.827617 | 1.417139e-54 | -8.615850e-47 |
| Msa1270730 | Msa1358070 | 0.803495 | 3.393146e-49 | -8.615850e-47 |
| Msa1329790 | Msa1358070 | 0.808925 | 2.437418e-50 | -8.615850e-47 |
| Msa1330630 | Msa1358070 | 0.839149 | 1.883529e-57 | -8.615850e-47 |
| Msa1332050 | Msa1358070 | 0.831545 | 1.571224e-55 | -8.615850e-47 |
| Msa1340200 | Msa1358070 | 0.819305 | 1.245447e-52 | -8.615850e-47 |
| Msa1341490 | Msa1358070 | 0.801590 | 8.380917e-49 | -8.615850e-47 |
| Msa0366210 | Msa1358070 | 0.811941 | 5.442558e-51 | -8.615850e-47 |
| Msa0376020 | Msa1358070 | 0.809197 | 2.131294e-50 | -8.615850e-47 |
| Msa0376910 | Msa1358070 | 0.812894 | 3.369905e-51 | -8.615850e-47 |
| Msa0381610 | Msa1358070 | -0.806076 | 9.805518e-50 | -8.615850e-47 |
| Msa0382370 | Msa1358070 | 0.815503 | 8.941866e-52 | -8.615850e-47 |
| Msa0389770 | Msa1358070 | 0.809128 | 2.205229e-50 | -8.615850e-47 |
| Msa0389910 | Msa1358070 | 0.810937 | 8.991189e-51 | -8.615850e-47 |
| Msa0395480 | Msa1358070 | 0.800240 | 1.581550e-48 | -8.615850e-47 |
| Msa0395980 | Msa1358070 | 0.835192 | 1.936540e-56 | -8.615850e-47 |
| Msa0401560 | Msa1358070 | 0.842550 | 2.414978e-58 | -8.615850e-47 |
| Msa0414140 | Msa1358070 | 0.800992 | 1.111013e-48 | -8.615850e-47 |
| Msa0422180 | Msa1358070 | 0.800809 | 1.210788e-48 | -8.615850e-47 |
| Msa0432160 | Msa1358070 | 0.821155 | 4.691944e-53 | -8.615850e-47 |
| Msa0440510 | Msa1358070 | 0.816976 | 4.189321e-52 | -8.615850e-47 |
| Msa0450400 | Msa1358070 | -0.813646 | 2.303622e-51 | -8.615850e-47 |
| Msa0471900 | Msa1358070 | 0.814557 | 1.449828e-51 | -8.615850e-47 |
| Msa0476680 | Msa1358070 | 0.824596 | 7.410707e-54 | -8.615850e-47 |
| Msa0986510 | Msa1358070 | 0.811988 | 5.316296e-51 | -8.615850e-47 |
| Msa0990580 | Msa1358070 | 0.821933 | 3.102780e-53 | -8.615850e-47 |
| Msa0992580 | Msa1358070 | 0.820952 | 5.226621e-53 | -8.615850e-47 |
| Msa0992600 | Msa1358070 | 0.801790 | 7.626444e-49 | -8.615850e-47 |
| Msa0994370 | Msa1358070 | 0.822462 | 2.338237e-53 | -8.615850e-47 |
| Msa1002960 | Msa1358070 | 0.813397 | 2.613570e-51 | -8.615850e-47 |
| Msa1024680 | Msa1358070 | 0.820662 | 6.093949e-53 | -8.615850e-47 |
| Msa1034280 | Msa1358070 | 0.804992 | 1.655110e-49 | -8.615850e-47 |
| Msa1034500 | Msa1358070 | 0.816391 | 5.666330e-52 | -8.615850e-47 |
| Msa1036610 | Msa1358070 | 0.834787 | 2.448389e-56 | -8.615850e-47 |
| Msa1037520 | Msa1358070 | 0.800242 | 1.580093e-48 | -8.615850e-47 |
| Msa1040980 | Msa1358070 | 0.805051 | 1.609119e-49 | -8.615850e-47 |
| Msa1063420 | Msa1358070 | 0.851442 | 8.850965e-61 | -8.615850e-47 |
| Msa1089450 | Msa1358070 | 0.816770 | 4.660019e-52 | -8.615850e-47 |
| Msa1094190 | Msa1358070 | 0.821331 | 4.273836e-53 | -8.615850e-47 |
| Msa0240900 | Msa1358070 | 0.813649 | 2.300655e-51 | -8.615850e-47 |
| Msa0241140 | Msa1358070 | 0.828512 | 8.629164e-55 | -8.615850e-47 |
| Msa0244970 | Msa1358070 | 0.829574 | 4.771075e-55 | -8.615850e-47 |
| Msa0244980 | Msa1358070 | 0.816169 | 6.350265e-52 | -8.615850e-47 |
| Msa0249310 | Msa1358070 | 0.816383 | 5.688654e-52 | -8.615850e-47 |
| Msa0259210 | Msa1358070 | 0.809347 | 1.979488e-50 | -8.615850e-47 |
| Msa0281530 | Msa1358070 | 0.802548 | 5.325590e-49 | -8.615850e-47 |
| Msa0283420 | Msa1358070 | 0.824479 | 7.895983e-54 | -8.615850e-47 |
| Msa0286670 | Msa1358070 | 0.803802 | 2.930000e-49 | -8.615850e-47 |
| Msa0287790 | Msa1358070 | 0.823984 | 1.031940e-53 | -8.615850e-47 |
| Msa0296790 | Msa1358070 | 0.815946 | 7.124966e-52 | -8.615850e-47 |
| Msa0307960 | Msa1358070 | 0.815158 | 1.066933e-51 | -8.615850e-47 |
| Msa0308440 | Msa1358070 | 0.816885 | 4.389533e-52 | -8.615850e-47 |
| Msa0308630 | Msa1358070 | 0.809453 | 1.878249e-50 | -8.615850e-47 |
| Msa0317970 | Msa1358070 | 0.817356 | 3.440636e-52 | -8.615850e-47 |
| Msa0321690 | Msa1358070 | 0.853251 | 2.703841e-61 | -8.615850e-47 |
| Msa0336320 | Msa1358070 | 0.822258 | 2.607870e-53 | -8.615850e-47 |
| Msa0339910 | Msa1358070 | 0.813319 | 2.718189e-51 | -8.615850e-47 |
| Msa0342010 | Msa1358070 | 0.812668 | 3.776040e-51 | -8.615850e-47 |
| Msa0348530 | Msa1358070 | 0.810497 | 1.119137e-50 | -8.615850e-47 |
| Msa0360210 | Msa1358070 | 0.800819 | 1.205011e-48 | -8.615850e-47 |
| Msa0362890 | Msa1358070 | 0.815577 | 8.610051e-52 | -8.615850e-47 |
| Msa1108710 | Msa1358070 | 0.828000 | 1.146699e-54 | -8.615850e-47 |
| Msa1130400 | Msa1358070 | 0.801456 | 8.926176e-49 | -8.615850e-47 |
| Msa1130530 | Msa1358070 | 0.807007 | 6.237694e-50 | -8.615850e-47 |
| Msa1143020 | Msa1358070 | 0.803756 | 2.994851e-49 | -8.615850e-47 |
| Msa1163730 | Msa1358070 | 0.834348 | 3.156499e-56 | -8.615850e-47 |
| Msa1208790 | Msa1358070 | 0.832030 | 1.192751e-55 | -8.615850e-47 |
| Msa1211340 | Msa1358070 | 0.805107 | 1.566172e-49 | -8.615850e-47 |
| Msa0482940 | Msa1358070 | 0.821267 | 4.421299e-53 | -8.615850e-47 |
| Msa0489660 | Msa1358070 | 0.801859 | 7.381897e-49 | -8.615850e-47 |
| Msa0491000 | Msa1358070 | 0.830300 | 3.173976e-55 | -8.615850e-47 |
| Msa0516020 | Msa1358070 | 0.807652 | 4.553366e-50 | -8.615850e-47 |
| Msa0521010 | Msa1358070 | 0.826329 | 2.879641e-54 | -8.615850e-47 |
| Msa0531250 | Msa1358070 | 0.806176 | 9.339436e-50 | -8.615850e-47 |
| Msa0558370 | Msa1358070 | 0.800736 | 1.253151e-48 | -8.615850e-47 |
| Msa0571780 | Msa1358070 | 0.800229 | 1.589573e-48 | -8.615850e-47 |
| Msa0588090 | Msa1358070 | 0.817501 | 3.191433e-52 | -8.615850e-47 |
| Msa0594920 | Msa1358070 | 0.801512 | 8.693835e-49 | -8.615850e-47 |
| Msa0597770 | Msa1358070 | 0.801810 | 7.554024e-49 | -8.615850e-47 |
| Msa0600080 | Msa1358070 | 0.814963 | 1.178916e-51 | -8.615850e-47 |
| Msa0600450 | Msa1358070 | 0.807119 | 5.906572e-50 | -8.615850e-47 |
| Msa0601950 | Msa1358070 | 0.807180 | 5.732223e-50 | -8.615850e-47 |
| Msa0844110 | Msa1358070 | 0.809894 | 1.509933e-50 | -8.615850e-47 |
| Msa0868160 | Msa1358070 | 0.800164 | 1.638575e-48 | -8.615850e-47 |
| Msa0890550 | Msa1358070 | 0.814752 | 1.312612e-51 | -8.615850e-47 |
| Msa0892640 | Msa1358070 | 0.804032 | 2.624383e-49 | -8.615850e-47 |
| Msa0894710 | Msa1358070 | 0.822835 | 1.914738e-53 | -8.615850e-47 |
| Msa0897200 | Msa1358070 | 0.804744 | 1.864715e-49 | -8.615850e-47 |
| Msa0918390 | Msa1358070 | 0.800118 | 1.674572e-48 | -8.615850e-47 |
| Msa0921420 | Msa1358070 | 0.817347 | 3.457463e-52 | -8.615850e-47 |
| Msa0923780 | Msa1358070 | 0.802374 | 5.783226e-49 | -8.615850e-47 |
| Msa0933760 | Msa1358070 | 0.838650 | 2.534965e-57 | -8.615850e-47 |
| Msa0934140 | Msa1358070 | 0.849924 | 2.366102e-60 | -8.615850e-47 |
| Msa0936390 | Msa1358070 | 0.813729 | 2.209083e-51 | -8.615850e-47 |
| Msa0960390 | Msa1358070 | 0.825175 | 5.408887e-54 | -8.615850e-47 |
| Msa0962840 | Msa1358070 | 0.832353 | 9.920693e-56 | -8.615850e-47 |
| Msa0969370 | Msa1358070 | 0.821519 | 3.867474e-53 | -8.615850e-47 |
| Msa0969730 | Msa1358070 | 0.815892 | 7.323225e-52 | -8.615850e-47 |
| Msa0971650 | Msa1358070 | 0.818125 | 2.306954e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358070 | MtrunA17_Chr5g0397781 | 95.694 | 209 | 9 | 0 | 1 | 209 | 1 | 209 | 5.08e-133 | 372 |
| Msa1358070 | MtrunA17_Chr8g0386521 | 50.538 | 186 | 88 | 2 | 28 | 209 | 15 | 200 | 2.26e-55 | 175 |
| Msa1358070 | MtrunA17_Chr1g0203401 | 57.937 | 126 | 53 | 0 | 82 | 207 | 84 | 209 | 3.14e-45 | 149 |
| Msa1358070 | MtrunA17_Chr8g0349271 | 59.524 | 126 | 51 | 0 | 82 | 207 | 75 | 200 | 3.87e-44 | 146 |
| Msa1358070 | MtrunA17_Chr7g0247121 | 50.769 | 65 | 32 | 0 | 143 | 207 | 34 | 98 | 1.34e-15 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358070 | AT5G23750.3 | 60.317 | 126 | 50 | 0 | 82 | 207 | 104 | 229 | 4.75e-49 | 160 |
| Msa1358070 | AT5G23750.2 | 60.317 | 126 | 50 | 0 | 82 | 207 | 76 | 201 | 5.60e-49 | 159 |
| Msa1358070 | AT5G23750.1 | 60.317 | 126 | 50 | 0 | 82 | 207 | 77 | 202 | 7.40e-49 | 158 |
| Msa1358070 | AT3G48940.1 | 57.937 | 126 | 53 | 0 | 82 | 207 | 50 | 175 | 1.46e-44 | 147 |
| Msa1358070 | AT3G61260.1 | 56.154 | 130 | 57 | 0 | 78 | 207 | 83 | 212 | 7.54e-44 | 146 |
| Msa1358070 | AT2G45820.1 | 58.519 | 135 | 56 | 0 | 73 | 207 | 56 | 190 | 3.97e-40 | 135 |
| Msa1358070 | AT1G63295.1 | 40.625 | 128 | 73 | 2 | 83 | 207 | 24 | 151 | 7.65e-21 | 85.1 |
| Msa1358070 | AT1G63295.2 | 43.243 | 111 | 63 | 0 | 83 | 193 | 64 | 174 | 2.33e-20 | 85.1 |
| Msa1358070 | AT4G00670.1 | 37.963 | 108 | 66 | 1 | 101 | 207 | 16 | 123 | 1.49e-17 | 75.9 |
Find 46 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAATCTTCTGTTGGATTA+TGG | 0.203365 | tig0016220:+265141 | Msa1358070:CDS |
| AATGCTTATGTTATTGATAA+TGG | 0.221487 | tig0016220:-265887 | None:intergenic |
| AAGCATGCAAACAATTTCTT+TGG | 0.279239 | tig0016220:-265701 | None:intergenic |
| GAAGAAAACTGAATTCTTGA+TGG | 0.311064 | tig0016220:+265753 | Msa1358070:three_prime_UTR |
| AGGGGATCATGATGATAAAA+AGG | 0.323089 | tig0016220:+264830 | Msa1358070:CDS |
| GCAATCTTCTGTTGGATTAT+GGG | 0.326593 | tig0016220:+265142 | Msa1358070:CDS |
| AAAAGACAAAGGCAGAAAAT+AGG | 0.344478 | tig0016220:+265028 | Msa1358070:CDS |
| AGATGATCATGCTGGTAATA+AGG | 0.356783 | tig0016220:+264803 | Msa1358070:CDS |
| CATGCTGGTAATAAGGAAAC+AGG | 0.363454 | tig0016220:+264810 | Msa1358070:CDS |
| GGGGAAAGCTCTTCAGGAAC+AGG | 0.393746 | tig0016220:-263971 | None:intergenic |
| GCTTTCCCCTGTTGTGGAAA+AGG | 0.394410 | tig0016220:+263985 | Msa1358070:CDS |
| AAACTGAATTCTTGATGGAT+TGG | 0.403172 | tig0016220:+265758 | Msa1358070:three_prime_UTR |
| ACAACAGGGGAAAGCTCTTC+AGG | 0.423226 | tig0016220:-263977 | None:intergenic |
| ACCACAGCTACAGTCTCTTC+TGG | 0.424564 | tig0016220:+263946 | Msa1358070:CDS |
| TGGCCTGCTGAGTAGGCTCC+TGG | 0.430478 | tig0016220:-264039 | None:intergenic |
| TGAAGAGCTTTCCCCTGTTG+TGG | 0.460075 | tig0016220:+263979 | Msa1358070:CDS |
| TACAAGAAGCAATCTTCTGT+TGG | 0.476983 | tig0016220:+265134 | Msa1358070:CDS |
| AAGCAAGAAATCATCTATAG+AGG | 0.477360 | tig0016220:+265169 | Msa1358070:CDS |
| TGATTCAGTCTTGTTGATGC+TGG | 0.478635 | tig0016220:-263924 | None:intergenic |
| AATTGTAGCAGAGAAAAGAT+TGG | 0.480532 | tig0016220:+264978 | Msa1358070:CDS |
| TTCTGTTCTGTTATGTTCTG+CGG | 0.503284 | tig0016220:-263876 | None:intergenic |
| ATTGGCTTTAATTAAAGCAT+GGG | 0.513985 | tig0016220:+264996 | Msa1358070:CDS |
| GATTGGCTTTAATTAAAGCA+TGG | 0.523135 | tig0016220:+264995 | Msa1358070:CDS |
| CAGCCAGGAGCCTACTCAGC+AGG | 0.535469 | tig0016220:+264036 | Msa1358070:CDS |
| GTTGAGATGGCCTGCTGAGT+AGG | 0.537629 | tig0016220:-264046 | None:intergenic |
| CTGATCATCAAGTGTTGAGA+TGG | 0.554532 | tig0016220:-264059 | None:intergenic |
| GGCACAACTCAAGAAATTTG+AGG | 0.555597 | tig0016220:+265190 | Msa1358070:CDS |
| TAACAGAACAGAACAAGTCA+TGG | 0.567812 | tig0016220:+263886 | Msa1358070:exon |
| CTGAAAACTTAGTTATGACA+AGG | 0.584476 | tig0016220:-263835 | None:intergenic |
| AACTTAGTTATGACAAGGGT+AGG | 0.585109 | tig0016220:-263830 | None:intergenic |
| GGAAGAATGTCTGGAGCTAG+AGG | 0.585162 | tig0016220:+265643 | Msa1358070:CDS |
| ATGTTATTGATAATGGAATG+TGG | 0.588270 | tig0016220:-265880 | None:intergenic |
| ATTTCTTTGGTGCAACTCCA+CGG | 0.591194 | tig0016220:-265688 | None:intergenic |
| AAGCAATATCAGTATCAGCC+AGG | 0.592102 | tig0016220:+264021 | Msa1358070:CDS |
| GCTGCAAAGTTTCGTAGCCG+TGG | 0.595886 | tig0016220:+265671 | Msa1358070:CDS |
| ATCTTCTGTTGGATTATGGG+AGG | 0.596122 | tig0016220:+265145 | Msa1358070:CDS |
| GAGGTTGCAGATGATCATGC+TGG | 0.615505 | tig0016220:+264795 | Msa1358070:intron |
| AACAGAACAGAACAAGTCAT+GGG | 0.617130 | tig0016220:+263887 | Msa1358070:exon |
| CAAGTCATGGGAGAATCAGA+AGG | 0.618923 | tig0016220:+263899 | Msa1358070:exon |
| TCCAGAAGAGACTGTAGCTG+TGG | 0.625821 | tig0016220:-263947 | None:intergenic |
| ATGCTGGTAATAAGGAAACA+GGG | 0.632785 | tig0016220:+264811 | Msa1358070:CDS |
| TGCTGGTAATAAGGAAACAG+GGG | 0.640080 | tig0016220:+264812 | Msa1358070:CDS |
| GGAAGAAAGTGAAAAGACAA+AGG | 0.645779 | tig0016220:+265017 | Msa1358070:CDS |
| GGGAAAGCTCTTCAGGAACA+GGG | 0.646598 | tig0016220:-263970 | None:intergenic |
| GCTAAGGGCTCAACTGACAG+AGG | 0.669431 | tig0016220:+264855 | Msa1358070:CDS |
| TGAAAACTTAGTTATGACAA+GGG | 0.676390 | tig0016220:-263834 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTATTAGTTATTATTTA+TGG | + | tig0016220:265213-265232 | Msa1358070:intron | 10.0% |
| !!! | ACAAAATTGTTTTAAATAAT+AGG | + | tig0016220:265511-265530 | Msa1358070:intron | 10.0% |
| !!! | TTTTAAATAATAGGAAAATT+TGG | + | tig0016220:265520-265539 | Msa1358070:intron | 10.0% |
| !! | TGATTATTAGTTATTATTTA+TGG | + | tig0016220:265213-265232 | Msa1358070:intron | 10.0% |
| !!! | ACAAAATTGTTTTAAATAAT+AGG | + | tig0016220:265511-265530 | Msa1358070:intron | 10.0% |
| !!! | TTTTAAATAATAGGAAAATT+TGG | + | tig0016220:265520-265539 | Msa1358070:intron | 10.0% |
| !! | TATCGTATTTATAGTTAATA+TGG | + | tig0016220:264615-264634 | Msa1358070:intron | 15.0% |
| !!! | TATTTTATATGAGTAAGAAT+GGG | - | tig0016220:265060-265079 | None:intergenic | 15.0% |
| !!! | ATATTTTATATGAGTAAGAA+TGG | - | tig0016220:265061-265080 | None:intergenic | 15.0% |
| !! | TATCGTATTTATAGTTAATA+TGG | + | tig0016220:264615-264634 | Msa1358070:intron | 15.0% |
| !!! | TATTTTATATGAGTAAGAAT+GGG | - | tig0016220:265060-265079 | None:intergenic | 15.0% |
| !!! | ATATTTTATATGAGTAAGAA+TGG | - | tig0016220:265061-265080 | None:intergenic | 15.0% |
| !!! | CTATCTTGTTTAAATTGTTA+AGG | + | tig0016220:264412-264431 | Msa1358070:intron | 20.0% |
| !!! | GTTAATATGGAATTTTTTTG+AGG | + | tig0016220:264628-264647 | Msa1358070:intron | 20.0% |
| !!! | GTTTTAGACTTCAAAATTTT+AGG | - | tig0016220:264665-264684 | None:intergenic | 20.0% |
| !!! | CTTTTTTGTTTTGTTTTGTT+TGG | + | tig0016220:265243-265262 | Msa1358070:intron | 20.0% |
| !!! | ATTTTGTAAGTTACAAATGA+GGG | - | tig0016220:265498-265517 | None:intergenic | 20.0% |
| !!! | AATTTTGTAAGTTACAAATG+AGG | - | tig0016220:265499-265518 | None:intergenic | 20.0% |
| !!! | AATTCAGTTTTCTTCTTATT+TGG | - | tig0016220:265748-265767 | None:intergenic | 20.0% |
| !!! | TTATGTATACTTTTAAAGTG+TGG | + | tig0016220:265798-265817 | Msa1358070:three_prime_UTR | 20.0% |
| !! | AATGCTTATGTTATTGATAA+TGG | - | tig0016220:265890-265909 | None:intergenic | 20.0% |
| !!! | CTATCTTGTTTAAATTGTTA+AGG | + | tig0016220:264412-264431 | Msa1358070:intron | 20.0% |
| !!! | GTTAATATGGAATTTTTTTG+AGG | + | tig0016220:264628-264647 | Msa1358070:intron | 20.0% |
| !!! | GTTTTAGACTTCAAAATTTT+AGG | - | tig0016220:264665-264684 | None:intergenic | 20.0% |
| !!! | CTTTTTTGTTTTGTTTTGTT+TGG | + | tig0016220:265243-265262 | Msa1358070:intron | 20.0% |
| !!! | ATTTTGTAAGTTACAAATGA+GGG | - | tig0016220:265498-265517 | None:intergenic | 20.0% |
| !!! | AATTTTGTAAGTTACAAATG+AGG | - | tig0016220:265499-265518 | None:intergenic | 20.0% |
| !!! | AATTCAGTTTTCTTCTTATT+TGG | - | tig0016220:265748-265767 | None:intergenic | 20.0% |
| !!! | TTATGTATACTTTTAAAGTG+TGG | + | tig0016220:265798-265817 | Msa1358070:three_prime_UTR | 20.0% |
| !! | AATGCTTATGTTATTGATAA+TGG | - | tig0016220:265890-265909 | None:intergenic | 20.0% |
| ! | TGAAAACTTAGTTATGACAA+GGG | - | tig0016220:263837-263856 | None:intergenic | 25.0% |
| ! | TTTAAGCCTCCAAATATATT+AGG | - | tig0016220:264454-264473 | None:intergenic | 25.0% |
| !!! | CCTCATATTTTATTTGTTCT+AGG | - | tig0016220:264545-264564 | None:intergenic | 25.0% |
| ! | CCTAGAACAAATAAAATATG+AGG | + | tig0016220:264542-264561 | Msa1358070:intron | 25.0% |
| ! | AGCTTAATTGTTTAGAAAGA+AGG | - | tig0016220:264568-264587 | None:intergenic | 25.0% |
| !! | TCATCATATTTTTCATACAG+AGG | + | tig0016220:264776-264795 | Msa1358070:intron | 25.0% |
| !!! | ATTGGCTTTAATTAAAGCAT+GGG | + | tig0016220:264996-265015 | Msa1358070:CDS | 25.0% |
| !!! | GTTTTGTTTGGTTGTAAATT+AGG | + | tig0016220:265255-265274 | Msa1358070:intron | 25.0% |
| ! | TCTAGTATAACTAAGGTTTA+GGG | - | tig0016220:265394-265413 | None:intergenic | 25.0% |
| ! | TTCTAGTATAACTAAGGTTT+AGG | - | tig0016220:265395-265414 | None:intergenic | 25.0% |
| ! | AATAGTTGAAGCTCAAAAAA+GGG | + | tig0016220:265622-265641 | Msa1358070:CDS | 25.0% |
| !!! | ATGTTATTGATAATGGAATG+TGG | - | tig0016220:265883-265902 | None:intergenic | 25.0% |
| ! | TGAAAACTTAGTTATGACAA+GGG | - | tig0016220:263837-263856 | None:intergenic | 25.0% |
| ! | TTTAAGCCTCCAAATATATT+AGG | - | tig0016220:264454-264473 | None:intergenic | 25.0% |
| !!! | CCTCATATTTTATTTGTTCT+AGG | - | tig0016220:264545-264564 | None:intergenic | 25.0% |
| ! | CCTAGAACAAATAAAATATG+AGG | + | tig0016220:264542-264561 | Msa1358070:intron | 25.0% |
| ! | AGCTTAATTGTTTAGAAAGA+AGG | - | tig0016220:264568-264587 | None:intergenic | 25.0% |
| !! | TCATCATATTTTTCATACAG+AGG | + | tig0016220:264776-264795 | Msa1358070:intron | 25.0% |
| !!! | ATTGGCTTTAATTAAAGCAT+GGG | + | tig0016220:264996-265015 | Msa1358070:CDS | 25.0% |
| !!! | GTTTTGTTTGGTTGTAAATT+AGG | + | tig0016220:265255-265274 | Msa1358070:intron | 25.0% |
| ! | TCTAGTATAACTAAGGTTTA+GGG | - | tig0016220:265394-265413 | None:intergenic | 25.0% |
| ! | TTCTAGTATAACTAAGGTTT+AGG | - | tig0016220:265395-265414 | None:intergenic | 25.0% |
| ! | AATAGTTGAAGCTCAAAAAA+GGG | + | tig0016220:265622-265641 | Msa1358070:CDS | 25.0% |
| !!! | ATGTTATTGATAATGGAATG+TGG | - | tig0016220:265883-265902 | None:intergenic | 25.0% |
| CTGAAAACTTAGTTATGACA+AGG | - | tig0016220:263838-263857 | None:intergenic | 30.0% | |
| ! | CTTGTCATAACTAAGTTTTC+AGG | + | tig0016220:263836-263855 | Msa1358070:five_prime_UTR | 30.0% |
| AAATTGTTAAGGTCATTGTC+AGG | + | tig0016220:264423-264442 | Msa1358070:intron | 30.0% | |
| AATTGTTAAGGTCATTGTCA+GGG | + | tig0016220:264424-264443 | Msa1358070:intron | 30.0% | |
| ! | TGAAGTCTAAAACCTTAACT+TGG | + | tig0016220:264672-264691 | Msa1358070:intron | 30.0% |
| ! | GAAGTCTAAAACCTTAACTT+GGG | + | tig0016220:264673-264692 | Msa1358070:intron | 30.0% |
| TGATGATAAAAAGGATGCTA+AGG | + | tig0016220:264839-264858 | Msa1358070:CDS | 30.0% | |
| GATGATAAAAAGGATGCTAA+GGG | + | tig0016220:264840-264859 | Msa1358070:CDS | 30.0% | |
| ! | ATTTTGTTGCATTAGATGCT+GGG | + | tig0016220:264947-264966 | Msa1358070:intron | 30.0% |
| AATTGTAGCAGAGAAAAGAT+TGG | + | tig0016220:264978-264997 | Msa1358070:CDS | 30.0% | |
| !! | GATTGGCTTTAATTAAAGCA+TGG | + | tig0016220:264995-265014 | Msa1358070:CDS | 30.0% |
| AAAAGACAAAGGCAGAAAAT+AGG | + | tig0016220:265028-265047 | Msa1358070:CDS | 30.0% | |
| AAGCAAGAAATCATCTATAG+AGG | + | tig0016220:265169-265188 | Msa1358070:CDS | 30.0% | |
| GATCTCTTCTAGTATAACTA+AGG | - | tig0016220:265401-265420 | None:intergenic | 30.0% | |
| GATGAATAAAGTGAGATTGT+GGG | - | tig0016220:265439-265458 | None:intergenic | 30.0% | |
| TGATGAATAAAGTGAGATTG+TGG | - | tig0016220:265440-265459 | None:intergenic | 30.0% | |
| CAATAGTTGAAGCTCAAAAA+AGG | + | tig0016220:265621-265640 | Msa1358070:CDS | 30.0% | |
| AAGCATGCAAACAATTTCTT+TGG | - | tig0016220:265704-265723 | None:intergenic | 30.0% | |
| GAAGAAAACTGAATTCTTGA+TGG | + | tig0016220:265753-265772 | Msa1358070:three_prime_UTR | 30.0% | |
| ! | AAACTGAATTCTTGATGGAT+TGG | + | tig0016220:265758-265777 | Msa1358070:three_prime_UTR | 30.0% |
| CTGAAAACTTAGTTATGACA+AGG | - | tig0016220:263838-263857 | None:intergenic | 30.0% | |
| ! | CTTGTCATAACTAAGTTTTC+AGG | + | tig0016220:263836-263855 | Msa1358070:five_prime_UTR | 30.0% |
| AAATTGTTAAGGTCATTGTC+AGG | + | tig0016220:264423-264442 | Msa1358070:intron | 30.0% | |
| AATTGTTAAGGTCATTGTCA+GGG | + | tig0016220:264424-264443 | Msa1358070:intron | 30.0% | |
| ! | TGAAGTCTAAAACCTTAACT+TGG | + | tig0016220:264672-264691 | Msa1358070:intron | 30.0% |
| ! | GAAGTCTAAAACCTTAACTT+GGG | + | tig0016220:264673-264692 | Msa1358070:intron | 30.0% |
| TGATGATAAAAAGGATGCTA+AGG | + | tig0016220:264839-264858 | Msa1358070:CDS | 30.0% | |
| GATGATAAAAAGGATGCTAA+GGG | + | tig0016220:264840-264859 | Msa1358070:CDS | 30.0% | |
| ! | ATTTTGTTGCATTAGATGCT+GGG | + | tig0016220:264947-264966 | Msa1358070:intron | 30.0% |
| AATTGTAGCAGAGAAAAGAT+TGG | + | tig0016220:264978-264997 | Msa1358070:CDS | 30.0% | |
| !! | GATTGGCTTTAATTAAAGCA+TGG | + | tig0016220:264995-265014 | Msa1358070:CDS | 30.0% |
| AAAAGACAAAGGCAGAAAAT+AGG | + | tig0016220:265028-265047 | Msa1358070:CDS | 30.0% | |
| AAGCAAGAAATCATCTATAG+AGG | + | tig0016220:265169-265188 | Msa1358070:CDS | 30.0% | |
| GATCTCTTCTAGTATAACTA+AGG | - | tig0016220:265401-265420 | None:intergenic | 30.0% | |
| GATGAATAAAGTGAGATTGT+GGG | - | tig0016220:265439-265458 | None:intergenic | 30.0% | |
| TGATGAATAAAGTGAGATTG+TGG | - | tig0016220:265440-265459 | None:intergenic | 30.0% | |
| CAATAGTTGAAGCTCAAAAA+AGG | + | tig0016220:265621-265640 | Msa1358070:CDS | 30.0% | |
| AAGCATGCAAACAATTTCTT+TGG | - | tig0016220:265704-265723 | None:intergenic | 30.0% | |
| GAAGAAAACTGAATTCTTGA+TGG | + | tig0016220:265753-265772 | Msa1358070:three_prime_UTR | 30.0% | |
| ! | AAACTGAATTCTTGATGGAT+TGG | + | tig0016220:265758-265777 | Msa1358070:three_prime_UTR | 30.0% |
| AACTTAGTTATGACAAGGGT+AGG | - | tig0016220:263833-263852 | None:intergenic | 35.0% | |
| TTCTGTTCTGTTATGTTCTG+CGG | - | tig0016220:263879-263898 | None:intergenic | 35.0% | |
| TAACAGAACAGAACAAGTCA+TGG | + | tig0016220:263886-263905 | Msa1358070:exon | 35.0% | |
| AACAGAACAGAACAAGTCAT+GGG | + | tig0016220:263887-263906 | Msa1358070:exon | 35.0% | |
| AGCCTCCAAATATATTAGGT+CGG | - | tig0016220:264450-264469 | None:intergenic | 35.0% | |
| AGATGATCATGCTGGTAATA+AGG | + | tig0016220:264803-264822 | Msa1358070:CDS | 35.0% | |
| ATGCTGGTAATAAGGAAACA+GGG | + | tig0016220:264811-264830 | Msa1358070:CDS | 35.0% | |
| AGGGGATCATGATGATAAAA+AGG | + | tig0016220:264830-264849 | Msa1358070:CDS | 35.0% | |
| ! | CATTTTGTTGCATTAGATGC+TGG | + | tig0016220:264946-264965 | Msa1358070:intron | 35.0% |
| GGAAGAAAGTGAAAAGACAA+AGG | + | tig0016220:265017-265036 | Msa1358070:CDS | 35.0% | |
| GAGCTTGATGAAAGATGAAA+TGG | + | tig0016220:265099-265118 | Msa1358070:intron | 35.0% | |
| TACAAGAAGCAATCTTCTGT+TGG | + | tig0016220:265134-265153 | Msa1358070:CDS | 35.0% | |
| AGCAATCTTCTGTTGGATTA+TGG | + | tig0016220:265141-265160 | Msa1358070:CDS | 35.0% | |
| GCAATCTTCTGTTGGATTAT+GGG | + | tig0016220:265142-265161 | Msa1358070:CDS | 35.0% | |
| TCAAAAAAGGGAAGAATGTC+TGG | + | tig0016220:265634-265653 | Msa1358070:CDS | 35.0% | |
| AACTTAGTTATGACAAGGGT+AGG | - | tig0016220:263833-263852 | None:intergenic | 35.0% | |
| TTCTGTTCTGTTATGTTCTG+CGG | - | tig0016220:263879-263898 | None:intergenic | 35.0% | |
| TAACAGAACAGAACAAGTCA+TGG | + | tig0016220:263886-263905 | Msa1358070:exon | 35.0% | |
| AACAGAACAGAACAAGTCAT+GGG | + | tig0016220:263887-263906 | Msa1358070:exon | 35.0% | |
| AGCCTCCAAATATATTAGGT+CGG | - | tig0016220:264450-264469 | None:intergenic | 35.0% | |
| AGATGATCATGCTGGTAATA+AGG | + | tig0016220:264803-264822 | Msa1358070:CDS | 35.0% | |
| ATGCTGGTAATAAGGAAACA+GGG | + | tig0016220:264811-264830 | Msa1358070:CDS | 35.0% | |
| AGGGGATCATGATGATAAAA+AGG | + | tig0016220:264830-264849 | Msa1358070:CDS | 35.0% | |
| ! | CATTTTGTTGCATTAGATGC+TGG | + | tig0016220:264946-264965 | Msa1358070:intron | 35.0% |
| GGAAGAAAGTGAAAAGACAA+AGG | + | tig0016220:265017-265036 | Msa1358070:CDS | 35.0% | |
| GAGCTTGATGAAAGATGAAA+TGG | + | tig0016220:265099-265118 | Msa1358070:intron | 35.0% | |
| TACAAGAAGCAATCTTCTGT+TGG | + | tig0016220:265134-265153 | Msa1358070:CDS | 35.0% | |
| AGCAATCTTCTGTTGGATTA+TGG | + | tig0016220:265141-265160 | Msa1358070:CDS | 35.0% | |
| GCAATCTTCTGTTGGATTAT+GGG | + | tig0016220:265142-265161 | Msa1358070:CDS | 35.0% | |
| TCAAAAAAGGGAAGAATGTC+TGG | + | tig0016220:265634-265653 | Msa1358070:CDS | 35.0% | |
| !! | TGATTCAGTCTTGTTGATGC+TGG | - | tig0016220:263927-263946 | None:intergenic | 40.0% |
| ! | TGATTCCTTTTCCACAACAG+GGG | - | tig0016220:263993-264012 | None:intergenic | 40.0% |
| ! | CTGATTCCTTTTCCACAACA+GGG | - | tig0016220:263994-264013 | None:intergenic | 40.0% |
| ! | TCTGATTCCTTTTCCACAAC+AGG | - | tig0016220:263995-264014 | None:intergenic | 40.0% |
| AAGCAATATCAGTATCAGCC+AGG | + | tig0016220:264021-264040 | Msa1358070:CDS | 40.0% | |
| !! | CTGATCATCAAGTGTTGAGA+TGG | - | tig0016220:264062-264081 | None:intergenic | 40.0% |
| ! | AAACCTTAACTTGGGTTGCT+TGG | + | tig0016220:264681-264700 | Msa1358070:intron | 40.0% |
| AAAAGCTCATGCAGTGATCA+GGG | - | tig0016220:264719-264738 | None:intergenic | 40.0% | |
| CATGCTGGTAATAAGGAAAC+AGG | + | tig0016220:264810-264829 | Msa1358070:CDS | 40.0% | |
| TGCTGGTAATAAGGAAACAG+GGG | + | tig0016220:264812-264831 | Msa1358070:CDS | 40.0% | |
| ACAAAGGCAGAAAATAGGCA+AGG | + | tig0016220:265033-265052 | Msa1358070:intron | 40.0% | |
| ATCTTCTGTTGGATTATGGG+AGG | + | tig0016220:265145-265164 | Msa1358070:CDS | 40.0% | |
| GGCACAACTCAAGAAATTTG+AGG | + | tig0016220:265190-265209 | Msa1358070:CDS | 40.0% | |
| ! | ATTTCTTTGGTGCAACTCCA+CGG | - | tig0016220:265691-265710 | None:intergenic | 40.0% |
| TTAGTTATGACAAGGGTAGG+TGG | - | tig0016220:263830-263849 | None:intergenic | 40.0% | |
| !! | TGATTCAGTCTTGTTGATGC+TGG | - | tig0016220:263927-263946 | None:intergenic | 40.0% |
| ! | TGATTCCTTTTCCACAACAG+GGG | - | tig0016220:263993-264012 | None:intergenic | 40.0% |
| ! | CTGATTCCTTTTCCACAACA+GGG | - | tig0016220:263994-264013 | None:intergenic | 40.0% |
| ! | TCTGATTCCTTTTCCACAAC+AGG | - | tig0016220:263995-264014 | None:intergenic | 40.0% |
| AAGCAATATCAGTATCAGCC+AGG | + | tig0016220:264021-264040 | Msa1358070:CDS | 40.0% | |
| !! | CTGATCATCAAGTGTTGAGA+TGG | - | tig0016220:264062-264081 | None:intergenic | 40.0% |
| ! | AAACCTTAACTTGGGTTGCT+TGG | + | tig0016220:264681-264700 | Msa1358070:intron | 40.0% |
| AAAAGCTCATGCAGTGATCA+GGG | - | tig0016220:264719-264738 | None:intergenic | 40.0% | |
| CATGCTGGTAATAAGGAAAC+AGG | + | tig0016220:264810-264829 | Msa1358070:CDS | 40.0% | |
| TGCTGGTAATAAGGAAACAG+GGG | + | tig0016220:264812-264831 | Msa1358070:CDS | 40.0% | |
| ACAAAGGCAGAAAATAGGCA+AGG | + | tig0016220:265033-265052 | Msa1358070:intron | 40.0% | |
| ATCTTCTGTTGGATTATGGG+AGG | + | tig0016220:265145-265164 | Msa1358070:CDS | 40.0% | |
| GGCACAACTCAAGAAATTTG+AGG | + | tig0016220:265190-265209 | Msa1358070:CDS | 40.0% | |
| ! | ATTTCTTTGGTGCAACTCCA+CGG | - | tig0016220:265691-265710 | None:intergenic | 40.0% |
| CAAGTCATGGGAGAATCAGA+AGG | + | tig0016220:263899-263918 | Msa1358070:exon | 45.0% | |
| CAGGGCCGACCTAATATATT+TGG | + | tig0016220:264442-264461 | Msa1358070:intron | 45.0% | |
| GGCCGACCTAATATATTTGG+AGG | + | tig0016220:264445-264464 | Msa1358070:intron | 45.0% | |
| CAAAAGCTCATGCAGTGATC+AGG | - | tig0016220:264720-264739 | None:intergenic | 45.0% | |
| AAAGATGAAATGGTCGCGCA+GGG | + | tig0016220:265109-265128 | Msa1358070:intron | 45.0% | |
| CGACACATTTCAGTTCCACA+AGG | - | tig0016220:265318-265337 | None:intergenic | 45.0% | |
| CGAACTTGTGCATGTAACAG+AGG | - | tig0016220:265363-265382 | None:intergenic | 45.0% | |
| CAAGTCATGGGAGAATCAGA+AGG | + | tig0016220:263899-263918 | Msa1358070:exon | 45.0% | |
| CAGGGCCGACCTAATATATT+TGG | + | tig0016220:264442-264461 | Msa1358070:intron | 45.0% | |
| GGCCGACCTAATATATTTGG+AGG | + | tig0016220:264445-264464 | Msa1358070:intron | 45.0% | |
| CAAAAGCTCATGCAGTGATC+AGG | - | tig0016220:264720-264739 | None:intergenic | 45.0% | |
| AAAGATGAAATGGTCGCGCA+GGG | + | tig0016220:265109-265128 | Msa1358070:intron | 45.0% | |
| CGACACATTTCAGTTCCACA+AGG | - | tig0016220:265318-265337 | None:intergenic | 45.0% | |
| CGAACTTGTGCATGTAACAG+AGG | - | tig0016220:265363-265382 | None:intergenic | 45.0% | |
| ACCACAGCTACAGTCTCTTC+TGG | + | tig0016220:263946-263965 | Msa1358070:CDS | 50.0% | |
| TCCAGAAGAGACTGTAGCTG+TGG | - | tig0016220:263950-263969 | None:intergenic | 50.0% | |
| GGGAAAGCTCTTCAGGAACA+GGG | - | tig0016220:263973-263992 | None:intergenic | 50.0% | |
| ACAACAGGGGAAAGCTCTTC+AGG | - | tig0016220:263980-263999 | None:intergenic | 50.0% | |
| TGAAGAGCTTTCCCCTGTTG+TGG | + | tig0016220:263979-263998 | Msa1358070:CDS | 50.0% | |
| GCTTTCCCCTGTTGTGGAAA+AGG | + | tig0016220:263985-264004 | Msa1358070:CDS | 50.0% | |
| GAGGTTGCAGATGATCATGC+TGG | + | tig0016220:264795-264814 | Msa1358070:intron | 50.0% | |
| GAAAGATGAAATGGTCGCGC+AGG | + | tig0016220:265108-265127 | Msa1358070:intron | 50.0% | |
| GACAAATCTCTCGAGCCTTG+TGG | + | tig0016220:265300-265319 | Msa1358070:intron | 50.0% | |
| ! | GGAAGAATGTCTGGAGCTAG+AGG | + | tig0016220:265643-265662 | Msa1358070:CDS | 50.0% |
| ACCACAGCTACAGTCTCTTC+TGG | + | tig0016220:263946-263965 | Msa1358070:CDS | 50.0% | |
| TCCAGAAGAGACTGTAGCTG+TGG | - | tig0016220:263950-263969 | None:intergenic | 50.0% | |
| GGGAAAGCTCTTCAGGAACA+GGG | - | tig0016220:263973-263992 | None:intergenic | 50.0% | |
| ACAACAGGGGAAAGCTCTTC+AGG | - | tig0016220:263980-263999 | None:intergenic | 50.0% | |
| TGAAGAGCTTTCCCCTGTTG+TGG | + | tig0016220:263979-263998 | Msa1358070:CDS | 50.0% | |
| GCTTTCCCCTGTTGTGGAAA+AGG | + | tig0016220:263985-264004 | Msa1358070:CDS | 50.0% | |
| GAGGTTGCAGATGATCATGC+TGG | + | tig0016220:264795-264814 | Msa1358070:intron | 50.0% | |
| GAAAGATGAAATGGTCGCGC+AGG | + | tig0016220:265108-265127 | Msa1358070:intron | 50.0% | |
| GACAAATCTCTCGAGCCTTG+TGG | + | tig0016220:265300-265319 | Msa1358070:intron | 50.0% | |
| ! | GGAAGAATGTCTGGAGCTAG+AGG | + | tig0016220:265643-265662 | Msa1358070:CDS | 50.0% |
| GGGGAAAGCTCTTCAGGAAC+AGG | - | tig0016220:263974-263993 | None:intergenic | 55.0% | |
| GTTGAGATGGCCTGCTGAGT+AGG | - | tig0016220:264049-264068 | None:intergenic | 55.0% | |
| GGGCCAAGCAACCCAAGTTA+AGG | - | tig0016220:264687-264706 | None:intergenic | 55.0% | |
| ! | AACTTGGGTTGCTTGGCCCT+TGG | + | tig0016220:264688-264707 | Msa1358070:intron | 55.0% |
| ! | ACTTGGGTTGCTTGGCCCTT+GGG | + | tig0016220:264689-264708 | Msa1358070:intron | 55.0% |
| !! | AGTGATCAGGGTTGGCCCAA+GGG | - | tig0016220:264707-264726 | None:intergenic | 55.0% |
| GCTCATGCAGTGATCAGGGT+TGG | - | tig0016220:264715-264734 | None:intergenic | 55.0% | |
| GCTAAGGGCTCAACTGACAG+AGG | + | tig0016220:264855-264874 | Msa1358070:CDS | 55.0% | |
| GCTGCAAAGTTTCGTAGCCG+TGG | + | tig0016220:265671-265690 | Msa1358070:CDS | 55.0% | |
| GGGGAAAGCTCTTCAGGAAC+AGG | - | tig0016220:263974-263993 | None:intergenic | 55.0% | |
| GTTGAGATGGCCTGCTGAGT+AGG | - | tig0016220:264049-264068 | None:intergenic | 55.0% | |
| GGGCCAAGCAACCCAAGTTA+AGG | - | tig0016220:264687-264706 | None:intergenic | 55.0% | |
| ! | AACTTGGGTTGCTTGGCCCT+TGG | + | tig0016220:264688-264707 | Msa1358070:intron | 55.0% |
| ! | ACTTGGGTTGCTTGGCCCTT+GGG | + | tig0016220:264689-264708 | Msa1358070:intron | 55.0% |
| !! | AGTGATCAGGGTTGGCCCAA+GGG | - | tig0016220:264707-264726 | None:intergenic | 55.0% |
| GCTCATGCAGTGATCAGGGT+TGG | - | tig0016220:264715-264734 | None:intergenic | 55.0% | |
| GCTAAGGGCTCAACTGACAG+AGG | + | tig0016220:264855-264874 | Msa1358070:CDS | 55.0% | |
| GCTGCAAAGTTTCGTAGCCG+TGG | + | tig0016220:265671-265690 | Msa1358070:CDS | 55.0% | |
| !! | CAGTGATCAGGGTTGGCCCA+AGG | - | tig0016220:264708-264727 | None:intergenic | 60.0% |
| !! | CAGTGATCAGGGTTGGCCCA+AGG | - | tig0016220:264708-264727 | None:intergenic | 60.0% |
| CAGCCAGGAGCCTACTCAGC+AGG | + | tig0016220:264036-264055 | Msa1358070:CDS | 65.0% | |
| TGGCCTGCTGAGTAGGCTCC+TGG | - | tig0016220:264042-264061 | None:intergenic | 65.0% | |
| CAGCCAGGAGCCTACTCAGC+AGG | + | tig0016220:264036-264055 | Msa1358070:CDS | 65.0% | |
| TGGCCTGCTGAGTAGGCTCC+TGG | - | tig0016220:264042-264061 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016220 | gene | 263828 | 265919 | 263828 | ID=Msa1358070;Name=Msa1358070 |
| tig0016220 | mRNA | 263828 | 265919 | 263828 | ID=Msa1358070-mRNA-1;Parent=Msa1358070;Name=Msa1358070-mRNA-1;_AED=0.35;_eAED=0.35;_QI=77|0.8|0.66|1|0.8|0.66|6|165|209 |
| tig0016220 | exon | 263828 | 264082 | 263828 | ID=Msa1358070-mRNA-1:exon:10634;Parent=Msa1358070-mRNA-1 |
| tig0016220 | exon | 264796 | 264876 | 264796 | ID=Msa1358070-mRNA-1:exon:10635;Parent=Msa1358070-mRNA-1 |
| tig0016220 | exon | 264962 | 265049 | 264962 | ID=Msa1358070-mRNA-1:exon:10636;Parent=Msa1358070-mRNA-1 |
| tig0016220 | exon | 265130 | 265211 | 265130 | ID=Msa1358070-mRNA-1:exon:10637;Parent=Msa1358070-mRNA-1 |
| tig0016220 | exon | 265533 | 265829 | 265533 | ID=Msa1358070-mRNA-1:exon:10638;Parent=Msa1358070-mRNA-1 |
| tig0016220 | exon | 265851 | 265919 | 265851 | ID=Msa1358070-mRNA-1:exon:10639;Parent=Msa1358070-mRNA-1 |
| tig0016220 | five_prime_UTR | 263828 | 263904 | 263828 | ID=Msa1358070-mRNA-1:five_prime_utr;Parent=Msa1358070-mRNA-1 |
| tig0016220 | CDS | 263905 | 264082 | 263905 | ID=Msa1358070-mRNA-1:cds;Parent=Msa1358070-mRNA-1 |
| tig0016220 | CDS | 264796 | 264876 | 264796 | ID=Msa1358070-mRNA-1:cds;Parent=Msa1358070-mRNA-1 |
| tig0016220 | CDS | 264962 | 265049 | 264962 | ID=Msa1358070-mRNA-1:cds;Parent=Msa1358070-mRNA-1 |
| tig0016220 | CDS | 265130 | 265211 | 265130 | ID=Msa1358070-mRNA-1:cds;Parent=Msa1358070-mRNA-1 |
| tig0016220 | CDS | 265533 | 265733 | 265533 | ID=Msa1358070-mRNA-1:cds;Parent=Msa1358070-mRNA-1 |
| tig0016220 | three_prime_UTR | 265734 | 265829 | 265734 | ID=Msa1358070-mRNA-1:three_prime_utr;Parent=Msa1358070-mRNA-1 |
| tig0016220 | three_prime_UTR | 265851 | 265919 | 265851 | ID=Msa1358070-mRNA-1:three_prime_utr;Parent=Msa1358070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
