Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753370 | sp|P93788|REMO_SOLTU | 48.691 | 191 | 92 | 4 | 20 | 207 | 11 | 198 | 8.95e-49 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753370 | G7KDE4 | 95.694 | 209 | 9 | 0 | 1 | 209 | 1 | 209 | 2.64e-129 | 372 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003400 | Msa0753370 | 0.800992 | 1.111142e-48 | -8.615850e-47 |
| Msa0010110 | Msa0753370 | 0.807333 | 5.320020e-50 | -8.615850e-47 |
| Msa0010770 | Msa0753370 | 0.802434 | 5.620351e-49 | -8.615850e-47 |
| Msa0031180 | Msa0753370 | 0.808623 | 2.827722e-50 | -8.615850e-47 |
| Msa0040620 | Msa0753370 | 0.802112 | 6.547117e-49 | -8.615850e-47 |
| Msa0046560 | Msa0753370 | 0.805466 | 1.316954e-49 | -8.615850e-47 |
| Msa0050820 | Msa0753370 | 0.810221 | 1.283761e-50 | -8.615850e-47 |
| Msa0054820 | Msa0753370 | 0.806142 | 9.494685e-50 | -8.615850e-47 |
| Msa0072720 | Msa0753370 | 0.801551 | 8.537813e-49 | -8.615850e-47 |
| Msa0078480 | Msa0753370 | 0.809788 | 1.591703e-50 | -8.615850e-47 |
| Msa0079130 | Msa0753370 | 0.816276 | 6.011734e-52 | -8.615850e-47 |
| Msa0081650 | Msa0753370 | 0.818863 | 1.569996e-52 | -8.615850e-47 |
| Msa0090550 | Msa0753370 | 0.802744 | 4.852061e-49 | -8.615850e-47 |
| Msa0101830 | Msa0753370 | 0.811153 | 8.073050e-51 | -8.615850e-47 |
| Msa0104670 | Msa0753370 | 0.824049 | 9.961651e-54 | -8.615850e-47 |
| Msa0104800 | Msa0753370 | 0.810450 | 1.145744e-50 | -8.615850e-47 |
| Msa0106620 | Msa0753370 | 0.820142 | 8.017624e-53 | -8.615850e-47 |
| Msa0106710 | Msa0753370 | 0.823840 | 1.115105e-53 | -8.615850e-47 |
| Msa0640940 | Msa0753370 | 0.809650 | 1.703638e-50 | -8.615850e-47 |
| Msa0641730 | Msa0753370 | 0.804438 | 2.160547e-49 | -8.615850e-47 |
| Msa0661320 | Msa0753370 | 0.803405 | 3.540691e-49 | -8.615850e-47 |
| Msa0672550 | Msa0753370 | 0.801690 | 7.994630e-49 | -8.615850e-47 |
| Msa0679360 | Msa0753370 | 0.810215 | 1.287497e-50 | -8.615850e-47 |
| Msa0702750 | Msa0753370 | 0.801445 | 8.975771e-49 | -8.615850e-47 |
| Msa0709120 | Msa0753370 | 0.817362 | 3.429898e-52 | -8.615850e-47 |
| Msa0709160 | Msa0753370 | 0.805132 | 1.547158e-49 | -8.615850e-47 |
| Msa0721280 | Msa0753370 | 0.899339 | 2.186167e-77 | -8.615850e-47 |
| Msa0753370 | Msa0756380 | 0.803199 | 3.906009e-49 | -8.615850e-47 |
| Msa0753370 | Msa0763890 | 0.808338 | 3.252427e-50 | -8.615850e-47 |
| Msa0753370 | Msa0763920 | 0.816557 | 5.199713e-52 | -8.615850e-47 |
| Msa0753370 | Msa0789560 | 0.812611 | 3.886608e-51 | -8.615850e-47 |
| Msa0753370 | Msa0791090 | 0.802739 | 4.862332e-49 | -8.615850e-47 |
| Msa0753370 | Msa0795360 | 0.934215 | 5.699244e-96 | -8.615850e-47 |
| Msa0753370 | Msa0795370 | 0.862731 | 4.117308e-64 | -8.615850e-47 |
| Msa0753370 | Msa0811040 | 0.802466 | 5.534805e-49 | -8.615850e-47 |
| Msa0753370 | Msa0817460 | 0.829058 | 6.364456e-55 | -8.615850e-47 |
| Msa0753370 | Msa0832600 | 0.966050 | 2.093306e-125 | -8.615850e-47 |
| Msa0753370 | Msa0844110 | 0.807183 | 5.725021e-50 | -8.615850e-47 |
| Msa0753370 | Msa0868160 | 0.800364 | 1.492126e-48 | -8.615850e-47 |
| Msa0753370 | Msa0890550 | 0.807823 | 4.186764e-50 | -8.615850e-47 |
| Msa0753370 | Msa0892640 | 0.812495 | 4.119139e-51 | -8.615850e-47 |
| Msa0753370 | Msa0894710 | 0.829496 | 4.982674e-55 | -8.615850e-47 |
| Msa0753370 | Msa0897200 | 0.809033 | 2.311441e-50 | -8.615850e-47 |
| Msa0753370 | Msa0903780 | 0.804444 | 2.154067e-49 | -8.615850e-47 |
| Msa0753370 | Msa0921420 | 0.816631 | 5.007190e-52 | -8.615850e-47 |
| Msa0753370 | Msa0923780 | 0.811797 | 5.849292e-51 | -8.615850e-47 |
| Msa0753370 | Msa0933760 | 0.826366 | 2.821755e-54 | -8.615850e-47 |
| Msa0753370 | Msa0934140 | 0.832497 | 9.141268e-56 | -8.615850e-47 |
| Msa0753370 | Msa0960390 | 0.812819 | 3.498983e-51 | -8.615850e-47 |
| Msa0753370 | Msa0962840 | 0.832711 | 8.087982e-56 | -8.615850e-47 |
| Msa0753370 | Msa0969370 | 0.813728 | 2.209503e-51 | -8.615850e-47 |
| Msa0753370 | Msa0971650 | 0.815144 | 1.074447e-51 | -8.615850e-47 |
| Msa0753370 | Msa0986510 | 0.809832 | 1.557082e-50 | -8.615850e-47 |
| Msa0753370 | Msa0990580 | 0.804512 | 2.084886e-49 | -8.615850e-47 |
| Msa0753370 | Msa0992580 | 0.819831 | 9.447155e-53 | -8.615850e-47 |
| Msa0753370 | Msa0992600 | 0.806739 | 7.105910e-50 | -8.615850e-47 |
| Msa0753370 | Msa0994370 | 0.804709 | 1.896126e-49 | -8.615850e-47 |
| Msa0753370 | Msa1002960 | 0.811812 | 5.805558e-51 | -8.615850e-47 |
| Msa0753370 | Msa1009750 | 0.800794 | 1.219075e-48 | -8.615850e-47 |
| Msa0753370 | Msa1024680 | 0.803519 | 3.354416e-49 | -8.615850e-47 |
| Msa0753370 | Msa1034500 | 0.811239 | 7.734426e-51 | -8.615850e-47 |
| Msa0753370 | Msa1036610 | 0.807981 | 3.876437e-50 | -8.615850e-47 |
| Msa0753370 | Msa1040980 | 0.801455 | 8.932483e-49 | -8.615850e-47 |
| Msa0753370 | Msa1063420 | 0.848760 | 4.990758e-60 | -8.615850e-47 |
| Msa0753370 | Msa1089450 | 0.803498 | 3.387309e-49 | -8.615850e-47 |
| Msa0753370 | Msa1094190 | 0.810253 | 1.263409e-50 | -8.615850e-47 |
| Msa0753370 | Msa1130530 | 0.813522 | 2.453310e-51 | -8.615850e-47 |
| Msa0753370 | Msa1163730 | 0.816191 | 6.281088e-52 | -8.615850e-47 |
| Msa0753370 | Msa1208790 | 0.837779 | 4.249560e-57 | -8.615850e-47 |
| Msa0753370 | Msa1211340 | 0.809697 | 1.664441e-50 | -8.615850e-47 |
| Msa0753370 | Msa1212950 | 0.801069 | 1.071476e-48 | -8.615850e-47 |
| Msa0753370 | Msa1227150 | 0.806712 | 7.199667e-50 | -8.615850e-47 |
| Msa0753370 | Msa1234620 | 0.818080 | 2.361783e-52 | -8.615850e-47 |
| Msa0753370 | Msa1243870 | 0.812723 | 3.673361e-51 | -8.615850e-47 |
| Msa0753370 | Msa1258980 | 0.834479 | 2.927019e-56 | -8.615850e-47 |
| Msa0753370 | Msa1259640 | 0.808783 | 2.613414e-50 | -8.615850e-47 |
| Msa0753370 | Msa1270660 | 0.820220 | 7.694819e-53 | -8.615850e-47 |
| Msa0753370 | Msa1270730 | 0.800512 | 1.391768e-48 | -8.615850e-47 |
| Msa0753370 | Msa1329790 | 0.810412 | 1.167815e-50 | -8.615850e-47 |
| Msa0753370 | Msa1330630 | 0.835072 | 2.075349e-56 | -8.615850e-47 |
| Msa0753370 | Msa1332050 | 0.813822 | 2.106632e-51 | -8.615850e-47 |
| Msa0753370 | Msa1340200 | 0.827438 | 1.564087e-54 | -8.615850e-47 |
| Msa0753370 | Msa1341490 | 0.805901 | 1.067309e-49 | -8.615850e-47 |
| Msa0753370 | Msa1353470 | 0.822284 | 2.571659e-53 | -8.615850e-47 |
| Msa0753370 | Msa1357890 | 0.897986 | 8.250248e-77 | -8.615850e-47 |
| Msa0753370 | Msa1358070 | 0.964810 | 8.469209e-124 | -8.615850e-47 |
| Msa0753370 | Msa1359560 | 0.801534 | 8.604674e-49 | -8.615850e-47 |
| Msa0753370 | Msa1368360 | 0.821411 | 4.096576e-53 | -8.615850e-47 |
| Msa0753370 | Msa1370590 | 0.812122 | 4.968936e-51 | -8.615850e-47 |
| Msa0753370 | Msa1384100 | 0.812141 | 4.923154e-51 | -8.615850e-47 |
| Msa0753370 | Msa1392910 | 0.803072 | 4.150101e-49 | -8.615850e-47 |
| Msa0753370 | Msa1393120 | 0.820362 | 7.139167e-53 | -8.615850e-47 |
| Msa0753370 | Msa1398090 | 0.908269 | 2.055079e-81 | -8.615850e-47 |
| Msa0753370 | Msa1426570 | 0.806344 | 8.610727e-50 | -8.615850e-47 |
| Msa0753370 | Msa1437330 | 0.810066 | 1.386558e-50 | -8.615850e-47 |
| Msa0753370 | Msa1444120 | 0.813481 | 2.504363e-51 | -8.615850e-47 |
| Msa0753370 | Msa1454530 | 0.800969 | 1.122923e-48 | -8.615850e-47 |
| Msa0753370 | Msa1456230 | 0.811733 | 6.040378e-51 | -8.615850e-47 |
| Msa0753370 | Msa1463900 | 0.807022 | 6.191841e-50 | -8.615850e-47 |
| Msa0126790 | Msa0753370 | 0.824793 | 6.657773e-54 | -8.615850e-47 |
| Msa0127100 | Msa0753370 | 0.800628 | 1.318417e-48 | -8.615850e-47 |
| Msa0138500 | Msa0753370 | 0.801837 | 7.457776e-49 | -8.615850e-47 |
| Msa0138520 | Msa0753370 | 0.802644 | 5.087056e-49 | -8.615850e-47 |
| Msa0139670 | Msa0753370 | 0.817523 | 3.155464e-52 | -8.615850e-47 |
| Msa0143850 | Msa0753370 | 0.802580 | 5.243589e-49 | -8.615850e-47 |
| Msa0150860 | Msa0753370 | 0.818959 | 1.493053e-52 | -8.615850e-47 |
| Msa0171870 | Msa0753370 | 0.816516 | 5.311692e-52 | -8.615850e-47 |
| Msa0173800 | Msa0753370 | 0.805849 | 1.094237e-49 | -8.615850e-47 |
| Msa0183420 | Msa0753370 | 0.800972 | 1.121654e-48 | -8.615850e-47 |
| Msa0202800 | Msa0753370 | 0.800846 | 1.189933e-48 | -8.615850e-47 |
| Msa0204960 | Msa0753370 | 0.834142 | 3.555499e-56 | -8.615850e-47 |
| Msa0205010 | Msa0753370 | 0.820767 | 5.763443e-53 | -8.615850e-47 |
| Msa0206830 | Msa0753370 | 0.801703 | 7.943427e-49 | -8.615850e-47 |
| Msa0207030 | Msa0753370 | 0.807247 | 5.548530e-50 | -8.615850e-47 |
| Msa0217670 | Msa0753370 | 0.803592 | 3.238527e-49 | -8.615850e-47 |
| Msa0223330 | Msa0753370 | 0.808590 | 2.874059e-50 | -8.615850e-47 |
| Msa0225220 | Msa0753370 | 0.817329 | 3.489159e-52 | -8.615850e-47 |
| Msa0366210 | Msa0753370 | 0.821515 | 3.875763e-53 | -8.615850e-47 |
| Msa0376020 | Msa0753370 | 0.803866 | 2.841916e-49 | -8.615850e-47 |
| Msa0382370 | Msa0753370 | 0.806470 | 8.100387e-50 | -8.615850e-47 |
| Msa0389910 | Msa0753370 | 0.812223 | 4.724501e-51 | -8.615850e-47 |
| Msa0395980 | Msa0753370 | 0.833029 | 6.744126e-56 | -8.615850e-47 |
| Msa0401560 | Msa0753370 | 0.827046 | 1.941964e-54 | -8.615850e-47 |
| Msa0414140 | Msa0753370 | 0.809613 | 1.734897e-50 | -8.615850e-47 |
| Msa0419720 | Msa0753370 | 0.803032 | 4.230467e-49 | -8.615850e-47 |
| Msa0432160 | Msa0753370 | 0.812903 | 3.353578e-51 | -8.615850e-47 |
| Msa0440510 | Msa0753370 | 0.809352 | 1.974155e-50 | -8.615850e-47 |
| Msa0450400 | Msa0753370 | -0.804169 | 2.457925e-49 | -8.615850e-47 |
| Msa0476680 | Msa0753370 | 0.815315 | 9.846496e-52 | -8.615850e-47 |
| Msa0241140 | Msa0753370 | 0.821131 | 4.753381e-53 | -8.615850e-47 |
| Msa0244970 | Msa0753370 | 0.827520 | 1.495308e-54 | -8.615850e-47 |
| Msa0244980 | Msa0753370 | 0.823878 | 1.092761e-53 | -8.615850e-47 |
| Msa0249310 | Msa0753370 | 0.820046 | 8.436535e-53 | -8.615850e-47 |
| Msa0283420 | Msa0753370 | 0.837307 | 5.615371e-57 | -8.615850e-47 |
| Msa0286670 | Msa0753370 | 0.806594 | 7.624660e-50 | -8.615850e-47 |
| Msa0287790 | Msa0753370 | 0.827329 | 1.661333e-54 | -8.615850e-47 |
| Msa0296790 | Msa0753370 | 0.822471 | 2.327141e-53 | -8.615850e-47 |
| Msa0307960 | Msa0753370 | 0.824487 | 7.860681e-54 | -8.615850e-47 |
| Msa0308440 | Msa0753370 | 0.807547 | 4.792451e-50 | -8.615850e-47 |
| Msa0317970 | Msa0753370 | 0.805601 | 1.233584e-49 | -8.615850e-47 |
| Msa0321690 | Msa0753370 | 0.846807 | 1.721645e-59 | -8.615850e-47 |
| Msa0322900 | Msa0753370 | 0.806132 | 9.544544e-50 | -8.615850e-47 |
| Msa0336320 | Msa0753370 | 0.810084 | 1.374305e-50 | -8.615850e-47 |
| Msa0339910 | Msa0753370 | 0.818971 | 1.483681e-52 | -8.615850e-47 |
| Msa0342010 | Msa0753370 | 0.811042 | 8.531183e-51 | -8.615850e-47 |
| Msa0346700 | Msa0753370 | 0.804912 | 1.719709e-49 | -8.615850e-47 |
| Msa0348530 | Msa0753370 | 0.814018 | 1.907229e-51 | -8.615850e-47 |
| Msa0360210 | Msa0753370 | 0.800344 | 1.505974e-48 | -8.615850e-47 |
| Msa0362890 | Msa0753370 | 0.813029 | 3.148206e-51 | -8.615850e-47 |
| Msa0482940 | Msa0753370 | 0.812451 | 4.211055e-51 | -8.615850e-47 |
| Msa0489660 | Msa0753370 | 0.800002 | 1.768140e-48 | -8.615850e-47 |
| Msa0491000 | Msa0753370 | 0.829519 | 4.919950e-55 | -8.615850e-47 |
| Msa0516020 | Msa0753370 | 0.802495 | 5.461595e-49 | -8.615850e-47 |
| Msa0521010 | Msa0753370 | 0.816742 | 4.727872e-52 | -8.615850e-47 |
| Msa0523050 | Msa0753370 | 0.802532 | 5.365238e-49 | -8.615850e-47 |
| Msa0558370 | Msa0753370 | 0.806052 | 9.917250e-50 | -8.615850e-47 |
| Msa0588090 | Msa0753370 | 0.805454 | 1.324647e-49 | -8.615850e-47 |
| Msa0594920 | Msa0753370 | 0.808979 | 2.373154e-50 | -8.615850e-47 |
| Msa0600080 | Msa0753370 | 0.819688 | 1.018652e-52 | -8.615850e-47 |
| Msa0600450 | Msa0753370 | 0.804912 | 1.719758e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753370 | MtrunA17_Chr5g0397781 | 95.694 | 209 | 9 | 0 | 1 | 209 | 1 | 209 | 5.08e-133 | 372 |
| Msa0753370 | MtrunA17_Chr8g0386521 | 50.538 | 186 | 88 | 2 | 28 | 209 | 15 | 200 | 2.26e-55 | 175 |
| Msa0753370 | MtrunA17_Chr1g0203401 | 57.937 | 126 | 53 | 0 | 82 | 207 | 84 | 209 | 3.14e-45 | 149 |
| Msa0753370 | MtrunA17_Chr8g0349271 | 59.524 | 126 | 51 | 0 | 82 | 207 | 75 | 200 | 3.87e-44 | 146 |
| Msa0753370 | MtrunA17_Chr7g0247121 | 50.769 | 65 | 32 | 0 | 143 | 207 | 34 | 98 | 1.34e-15 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753370 | AT5G23750.3 | 60.317 | 126 | 50 | 0 | 82 | 207 | 104 | 229 | 4.75e-49 | 160 |
| Msa0753370 | AT5G23750.2 | 60.317 | 126 | 50 | 0 | 82 | 207 | 76 | 201 | 5.60e-49 | 159 |
| Msa0753370 | AT5G23750.1 | 60.317 | 126 | 50 | 0 | 82 | 207 | 77 | 202 | 7.40e-49 | 158 |
| Msa0753370 | AT3G48940.1 | 57.937 | 126 | 53 | 0 | 82 | 207 | 50 | 175 | 1.46e-44 | 147 |
| Msa0753370 | AT3G61260.1 | 56.154 | 130 | 57 | 0 | 78 | 207 | 83 | 212 | 7.54e-44 | 146 |
| Msa0753370 | AT2G45820.1 | 58.519 | 135 | 56 | 0 | 73 | 207 | 56 | 190 | 3.97e-40 | 135 |
| Msa0753370 | AT1G63295.1 | 40.625 | 128 | 73 | 2 | 83 | 207 | 24 | 151 | 7.65e-21 | 85.1 |
| Msa0753370 | AT1G63295.2 | 43.243 | 111 | 63 | 0 | 83 | 193 | 64 | 174 | 2.33e-20 | 85.1 |
| Msa0753370 | AT4G00670.1 | 37.963 | 108 | 66 | 1 | 101 | 207 | 16 | 123 | 1.49e-17 | 75.9 |
Find 45 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAATCTTCTGTTGGATTA+TGG | 0.203365 | 5_2:+7044934 | Msa0753370:CDS |
| AAGCATGCAAACAATTTCTT+TGG | 0.279239 | 5_2:-7045506 | None:intergenic |
| GAAGAAAACTGAATTCTTGA+TGG | 0.311064 | 5_2:+7045558 | Msa0753370:three_prime_UTR |
| AGGGGATCATGATGATAAAA+AGG | 0.323089 | 5_2:+7044605 | Msa0753370:CDS |
| GCAATCTTCTGTTGGATTAT+GGG | 0.326593 | 5_2:+7044935 | Msa0753370:CDS |
| AAAAGACAAAGGCAGAAAAT+AGG | 0.344478 | 5_2:+7044803 | Msa0753370:CDS |
| AGATGATCATGCTGGTAATA+AGG | 0.356783 | 5_2:+7044578 | Msa0753370:CDS |
| CATGCTGGTAATAAGGAAAC+AGG | 0.363454 | 5_2:+7044585 | Msa0753370:CDS |
| GGGGAAAGCTCTTCAGGAAC+AGG | 0.393746 | 5_2:-7043733 | None:intergenic |
| GCTTTCCCCTGTTGTGGAAA+AGG | 0.394410 | 5_2:+7043747 | Msa0753370:CDS |
| AAACTGAATTCTTGATGGAT+TGG | 0.403172 | 5_2:+7045563 | Msa0753370:three_prime_UTR |
| ACAACAGGGGAAAGCTCTTC+AGG | 0.423226 | 5_2:-7043739 | None:intergenic |
| ACCACAGCTACAGTCTCTTC+TGG | 0.424564 | 5_2:+7043708 | Msa0753370:CDS |
| TGGCCTGCTGAGTAGGCTCC+TGG | 0.430478 | 5_2:-7043801 | None:intergenic |
| TGAAGAGCTTTCCCCTGTTG+TGG | 0.460075 | 5_2:+7043741 | Msa0753370:CDS |
| TACAAGAAGCAATCTTCTGT+TGG | 0.476983 | 5_2:+7044927 | Msa0753370:CDS |
| AAGCAAGAAATCATCTATAG+AGG | 0.477360 | 5_2:+7044962 | Msa0753370:CDS |
| TGATTCAGTCTTGTTGATGC+TGG | 0.478635 | 5_2:-7043686 | None:intergenic |
| AATTGTAGCAGAGAAAAGAT+TGG | 0.480532 | 5_2:+7044753 | Msa0753370:CDS |
| TTCTGTTCTGTTATGTTCTG+CGG | 0.503284 | 5_2:-7043638 | None:intergenic |
| ATTGGCTTTAATTAAAGCAT+GGG | 0.513985 | 5_2:+7044771 | Msa0753370:CDS |
| GATTGGCTTTAATTAAAGCA+TGG | 0.523135 | 5_2:+7044770 | Msa0753370:CDS |
| CAGCCAGGAGCCTACTCAGC+AGG | 0.535469 | 5_2:+7043798 | Msa0753370:CDS |
| ATGTTATTGATTATGAAATG+TGG | 0.536366 | 5_2:-7045665 | None:intergenic |
| GTTGAGATGGCCTGCTGAGT+AGG | 0.537629 | 5_2:-7043808 | None:intergenic |
| CTGATCATCAAGTGTTGAGA+TGG | 0.554532 | 5_2:-7043821 | None:intergenic |
| GGCACAACTCAAGAAATTTG+AGG | 0.555597 | 5_2:+7044983 | Msa0753370:CDS |
| TAACAGAACAGAACAAGTCA+TGG | 0.567812 | 5_2:+7043648 | Msa0753370:exon |
| CTGAAAACTTAGTTATGACA+AGG | 0.584476 | 5_2:-7043595 | None:intergenic |
| AACTTAGTTATGACAAGGGT+AGG | 0.585109 | 5_2:-7043590 | None:intergenic |
| GGAAGAATGTCTGGAGCTAG+AGG | 0.585162 | 5_2:+7045448 | Msa0753370:CDS |
| ATTTCTTTGGTGCAACTCCA+CGG | 0.591194 | 5_2:-7045493 | None:intergenic |
| AAGCAATATCAGTATCAGCC+AGG | 0.592102 | 5_2:+7043783 | Msa0753370:CDS |
| GCTGCAAAGTTTCGTAGCCG+TGG | 0.595886 | 5_2:+7045476 | Msa0753370:CDS |
| ATCTTCTGTTGGATTATGGG+AGG | 0.596122 | 5_2:+7044938 | Msa0753370:CDS |
| GAGGTTGCAGATGATCATGC+TGG | 0.615505 | 5_2:+7044570 | Msa0753370:intron |
| AACAGAACAGAACAAGTCAT+GGG | 0.617130 | 5_2:+7043649 | Msa0753370:exon |
| CAAGTCATGGGAGAATCAGA+AGG | 0.618923 | 5_2:+7043661 | Msa0753370:exon |
| TCCAGAAGAGACTGTAGCTG+TGG | 0.625821 | 5_2:-7043709 | None:intergenic |
| ATGCTGGTAATAAGGAAACA+GGG | 0.632785 | 5_2:+7044586 | Msa0753370:CDS |
| TGCTGGTAATAAGGAAACAG+GGG | 0.640080 | 5_2:+7044587 | Msa0753370:CDS |
| GGAAGAAAGTGAAAAGACAA+AGG | 0.645779 | 5_2:+7044792 | Msa0753370:CDS |
| GGGAAAGCTCTTCAGGAACA+GGG | 0.646598 | 5_2:-7043732 | None:intergenic |
| GCTAAGGGCTCAACTGACAG+AGG | 0.669431 | 5_2:+7044630 | Msa0753370:CDS |
| TGAAAACTTAGTTATGACAA+GGG | 0.676390 | 5_2:-7043594 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTATTAGTTATTATTTA+TGG | + | chr5_2:7045006-7045025 | Msa0753370:intron | 10.0% |
| !!! | ACAAAATTGTTTTAAATAAT+AGG | + | chr5_2:7045316-7045335 | Msa0753370:intron | 10.0% |
| !!! | TTTTAAATAATAGGAAAATT+TGG | + | chr5_2:7045325-7045344 | Msa0753370:intron | 10.0% |
| !! | TGATTATTAGTTATTATTTA+TGG | + | chr5_2:7045006-7045025 | Msa0753370:intron | 10.0% |
| !!! | ACAAAATTGTTTTAAATAAT+AGG | + | chr5_2:7045316-7045335 | Msa0753370:intron | 10.0% |
| !!! | TTTTAAATAATAGGAAAATT+TGG | + | chr5_2:7045325-7045344 | Msa0753370:intron | 10.0% |
| !! | TATCGTATTTATAGTTAATA+TGG | + | chr5_2:7044384-7044403 | Msa0753370:intron | 15.0% |
| !! | TATCGTATTTATAGTTAATA+TGG | + | chr5_2:7044384-7044403 | Msa0753370:intron | 15.0% |
| !!! | CTATCTTGTTTAAATTGTTA+AGG | + | chr5_2:7044175-7044194 | Msa0753370:intron | 20.0% |
| !!! | GTTAATATGGAATTTTTTTG+AGG | + | chr5_2:7044397-7044416 | Msa0753370:intron | 20.0% |
| !!! | GTTTTAGACTTCAAAATTTT+AGG | - | chr5_2:7044434-7044453 | None:intergenic | 20.0% |
| !! | TAGTCATAAATCTATAAGAT+GGG | - | chr5_2:7044835-7044854 | None:intergenic | 20.0% |
| !! | ATAGTCATAAATCTATAAGA+TGG | - | chr5_2:7044836-7044855 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTTGTTGTAAATT+AGG | + | chr5_2:7045045-7045064 | Msa0753370:intron | 20.0% |
| !!! | ATTTTGTAAGTTACAAATGA+GGG | - | chr5_2:7045303-7045322 | None:intergenic | 20.0% |
| !!! | AATTTTGTAAGTTACAAATG+AGG | - | chr5_2:7045304-7045323 | None:intergenic | 20.0% |
| !!! | AATTCAGTTTTCTTCTTATT+TGG | - | chr5_2:7045553-7045572 | None:intergenic | 20.0% |
| !!! | TTATGTATACTTTTAAAGTG+TGG | + | chr5_2:7045603-7045622 | Msa0753370:three_prime_UTR | 20.0% |
| !!! | ATGTTATTGATTATGAAATG+TGG | - | chr5_2:7045668-7045687 | None:intergenic | 20.0% |
| !!! | CTATCTTGTTTAAATTGTTA+AGG | + | chr5_2:7044175-7044194 | Msa0753370:intron | 20.0% |
| !!! | GTTAATATGGAATTTTTTTG+AGG | + | chr5_2:7044397-7044416 | Msa0753370:intron | 20.0% |
| !!! | GTTTTAGACTTCAAAATTTT+AGG | - | chr5_2:7044434-7044453 | None:intergenic | 20.0% |
| !! | TAGTCATAAATCTATAAGAT+GGG | - | chr5_2:7044835-7044854 | None:intergenic | 20.0% |
| !! | ATAGTCATAAATCTATAAGA+TGG | - | chr5_2:7044836-7044855 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTTGTTGTAAATT+AGG | + | chr5_2:7045045-7045064 | Msa0753370:intron | 20.0% |
| !!! | ATTTTGTAAGTTACAAATGA+GGG | - | chr5_2:7045303-7045322 | None:intergenic | 20.0% |
| !!! | AATTTTGTAAGTTACAAATG+AGG | - | chr5_2:7045304-7045323 | None:intergenic | 20.0% |
| !!! | AATTCAGTTTTCTTCTTATT+TGG | - | chr5_2:7045553-7045572 | None:intergenic | 20.0% |
| !!! | TTATGTATACTTTTAAAGTG+TGG | + | chr5_2:7045603-7045622 | Msa0753370:three_prime_UTR | 20.0% |
| !!! | ATGTTATTGATTATGAAATG+TGG | - | chr5_2:7045668-7045687 | None:intergenic | 20.0% |
| ! | TGAAAACTTAGTTATGACAA+GGG | - | chr5_2:7043597-7043616 | None:intergenic | 25.0% |
| ! | TTTAAGCCTCCAAATATATT+AGG | - | chr5_2:7044217-7044236 | None:intergenic | 25.0% |
| ! | GCTTAAATTGTTTAGAAAGA+AGG | - | chr5_2:7044336-7044355 | None:intergenic | 25.0% |
| !! | TCATCATATTTTTCATACAG+AGG | + | chr5_2:7044551-7044570 | Msa0753370:intron | 25.0% |
| !!! | ATTGGCTTTAATTAAAGCAT+GGG | + | chr5_2:7044771-7044790 | Msa0753370:CDS | 25.0% |
| !! | ATGAATAAAGTGAGTATTGT+GGG | - | chr5_2:7045243-7045262 | None:intergenic | 25.0% |
| ! | AATAGTTGAAGCTCAAAAAA+GGG | + | chr5_2:7045427-7045446 | Msa0753370:CDS | 25.0% |
| ! | TGAAAACTTAGTTATGACAA+GGG | - | chr5_2:7043597-7043616 | None:intergenic | 25.0% |
| ! | TTTAAGCCTCCAAATATATT+AGG | - | chr5_2:7044217-7044236 | None:intergenic | 25.0% |
| ! | GCTTAAATTGTTTAGAAAGA+AGG | - | chr5_2:7044336-7044355 | None:intergenic | 25.0% |
| !! | TCATCATATTTTTCATACAG+AGG | + | chr5_2:7044551-7044570 | Msa0753370:intron | 25.0% |
| !!! | ATTGGCTTTAATTAAAGCAT+GGG | + | chr5_2:7044771-7044790 | Msa0753370:CDS | 25.0% |
| !! | ATGAATAAAGTGAGTATTGT+GGG | - | chr5_2:7045243-7045262 | None:intergenic | 25.0% |
| ! | AATAGTTGAAGCTCAAAAAA+GGG | + | chr5_2:7045427-7045446 | Msa0753370:CDS | 25.0% |
| CTGAAAACTTAGTTATGACA+AGG | - | chr5_2:7043598-7043617 | None:intergenic | 30.0% | |
| ! | CTTGTCATAACTAAGTTTTC+AGG | + | chr5_2:7043596-7043615 | Msa0753370:five_prime_UTR | 30.0% |
| AAATTGTTAAGGTCATTGTC+AGG | + | chr5_2:7044186-7044205 | Msa0753370:intron | 30.0% | |
| AATTGTTAAGGTCATTGTCA+GGG | + | chr5_2:7044187-7044206 | Msa0753370:intron | 30.0% | |
| ! | TGAAGTCTAAAACCTTAACT+TGG | + | chr5_2:7044441-7044460 | Msa0753370:intron | 30.0% |
| ! | GAAGTCTAAAACCTTAACTT+GGG | + | chr5_2:7044442-7044461 | Msa0753370:intron | 30.0% |
| TGATGATAAAAAGGATGCTA+AGG | + | chr5_2:7044614-7044633 | Msa0753370:CDS | 30.0% | |
| GATGATAAAAAGGATGCTAA+GGG | + | chr5_2:7044615-7044634 | Msa0753370:CDS | 30.0% | |
| ! | ATTTTGTTGCATTAGATGCT+GGG | + | chr5_2:7044722-7044741 | Msa0753370:intron | 30.0% |
| AATTGTAGCAGAGAAAAGAT+TGG | + | chr5_2:7044753-7044772 | Msa0753370:CDS | 30.0% | |
| !! | GATTGGCTTTAATTAAAGCA+TGG | + | chr5_2:7044770-7044789 | Msa0753370:CDS | 30.0% |
| AAAAGACAAAGGCAGAAAAT+AGG | + | chr5_2:7044803-7044822 | Msa0753370:CDS | 30.0% | |
| AAGCAAGAAATCATCTATAG+AGG | + | chr5_2:7044962-7044981 | Msa0753370:CDS | 30.0% | |
| TCTAGTATAACGAAGGTTTA+GGG | - | chr5_2:7045184-7045203 | None:intergenic | 30.0% | |
| TTCTAGTATAACGAAGGTTT+AGG | - | chr5_2:7045185-7045204 | None:intergenic | 30.0% | |
| ! | GATGAATAAAGTGAGTATTG+TGG | - | chr5_2:7045244-7045263 | None:intergenic | 30.0% |
| CAATAGTTGAAGCTCAAAAA+AGG | + | chr5_2:7045426-7045445 | Msa0753370:CDS | 30.0% | |
| AAGCATGCAAACAATTTCTT+TGG | - | chr5_2:7045509-7045528 | None:intergenic | 30.0% | |
| GAAGAAAACTGAATTCTTGA+TGG | + | chr5_2:7045558-7045577 | Msa0753370:three_prime_UTR | 30.0% | |
| ! | AAACTGAATTCTTGATGGAT+TGG | + | chr5_2:7045563-7045582 | Msa0753370:three_prime_UTR | 30.0% |
| CTGAAAACTTAGTTATGACA+AGG | - | chr5_2:7043598-7043617 | None:intergenic | 30.0% | |
| ! | CTTGTCATAACTAAGTTTTC+AGG | + | chr5_2:7043596-7043615 | Msa0753370:five_prime_UTR | 30.0% |
| AAATTGTTAAGGTCATTGTC+AGG | + | chr5_2:7044186-7044205 | Msa0753370:intron | 30.0% | |
| AATTGTTAAGGTCATTGTCA+GGG | + | chr5_2:7044187-7044206 | Msa0753370:intron | 30.0% | |
| ! | TGAAGTCTAAAACCTTAACT+TGG | + | chr5_2:7044441-7044460 | Msa0753370:intron | 30.0% |
| ! | GAAGTCTAAAACCTTAACTT+GGG | + | chr5_2:7044442-7044461 | Msa0753370:intron | 30.0% |
| TGATGATAAAAAGGATGCTA+AGG | + | chr5_2:7044614-7044633 | Msa0753370:CDS | 30.0% | |
| GATGATAAAAAGGATGCTAA+GGG | + | chr5_2:7044615-7044634 | Msa0753370:CDS | 30.0% | |
| ! | ATTTTGTTGCATTAGATGCT+GGG | + | chr5_2:7044722-7044741 | Msa0753370:intron | 30.0% |
| AATTGTAGCAGAGAAAAGAT+TGG | + | chr5_2:7044753-7044772 | Msa0753370:CDS | 30.0% | |
| !! | GATTGGCTTTAATTAAAGCA+TGG | + | chr5_2:7044770-7044789 | Msa0753370:CDS | 30.0% |
| AAAAGACAAAGGCAGAAAAT+AGG | + | chr5_2:7044803-7044822 | Msa0753370:CDS | 30.0% | |
| AAGCAAGAAATCATCTATAG+AGG | + | chr5_2:7044962-7044981 | Msa0753370:CDS | 30.0% | |
| TCTAGTATAACGAAGGTTTA+GGG | - | chr5_2:7045184-7045203 | None:intergenic | 30.0% | |
| TTCTAGTATAACGAAGGTTT+AGG | - | chr5_2:7045185-7045204 | None:intergenic | 30.0% | |
| ! | GATGAATAAAGTGAGTATTG+TGG | - | chr5_2:7045244-7045263 | None:intergenic | 30.0% |
| CAATAGTTGAAGCTCAAAAA+AGG | + | chr5_2:7045426-7045445 | Msa0753370:CDS | 30.0% | |
| AAGCATGCAAACAATTTCTT+TGG | - | chr5_2:7045509-7045528 | None:intergenic | 30.0% | |
| GAAGAAAACTGAATTCTTGA+TGG | + | chr5_2:7045558-7045577 | Msa0753370:three_prime_UTR | 30.0% | |
| ! | AAACTGAATTCTTGATGGAT+TGG | + | chr5_2:7045563-7045582 | Msa0753370:three_prime_UTR | 30.0% |
| AACTTAGTTATGACAAGGGT+AGG | - | chr5_2:7043593-7043612 | None:intergenic | 35.0% | |
| TTCTGTTCTGTTATGTTCTG+CGG | - | chr5_2:7043641-7043660 | None:intergenic | 35.0% | |
| TAACAGAACAGAACAAGTCA+TGG | + | chr5_2:7043648-7043667 | Msa0753370:exon | 35.0% | |
| AACAGAACAGAACAAGTCAT+GGG | + | chr5_2:7043649-7043668 | Msa0753370:exon | 35.0% | |
| AGCCTCCAAATATATTAGGT+CGG | - | chr5_2:7044213-7044232 | None:intergenic | 35.0% | |
| AGATGATCATGCTGGTAATA+AGG | + | chr5_2:7044578-7044597 | Msa0753370:CDS | 35.0% | |
| ATGCTGGTAATAAGGAAACA+GGG | + | chr5_2:7044586-7044605 | Msa0753370:CDS | 35.0% | |
| AGGGGATCATGATGATAAAA+AGG | + | chr5_2:7044605-7044624 | Msa0753370:CDS | 35.0% | |
| ! | CATTTTGTTGCATTAGATGC+TGG | + | chr5_2:7044721-7044740 | Msa0753370:intron | 35.0% |
| GGAAGAAAGTGAAAAGACAA+AGG | + | chr5_2:7044792-7044811 | Msa0753370:CDS | 35.0% | |
| GAGCATGATGAAAGATGAAA+TGG | + | chr5_2:7044892-7044911 | Msa0753370:intron | 35.0% | |
| TACAAGAAGCAATCTTCTGT+TGG | + | chr5_2:7044927-7044946 | Msa0753370:CDS | 35.0% | |
| AGCAATCTTCTGTTGGATTA+TGG | + | chr5_2:7044934-7044953 | Msa0753370:CDS | 35.0% | |
| GCAATCTTCTGTTGGATTAT+GGG | + | chr5_2:7044935-7044954 | Msa0753370:CDS | 35.0% | |
| CATCTCTTCTAGTATAACGA+AGG | - | chr5_2:7045191-7045210 | None:intergenic | 35.0% | |
| TCGTTATACTAGAAGAGATG+CGG | + | chr5_2:7045191-7045210 | Msa0753370:intron | 35.0% | |
| TCAAAAAAGGGAAGAATGTC+TGG | + | chr5_2:7045439-7045458 | Msa0753370:CDS | 35.0% | |
| AACTTAGTTATGACAAGGGT+AGG | - | chr5_2:7043593-7043612 | None:intergenic | 35.0% | |
| TTCTGTTCTGTTATGTTCTG+CGG | - | chr5_2:7043641-7043660 | None:intergenic | 35.0% | |
| TAACAGAACAGAACAAGTCA+TGG | + | chr5_2:7043648-7043667 | Msa0753370:exon | 35.0% | |
| AACAGAACAGAACAAGTCAT+GGG | + | chr5_2:7043649-7043668 | Msa0753370:exon | 35.0% | |
| AGCCTCCAAATATATTAGGT+CGG | - | chr5_2:7044213-7044232 | None:intergenic | 35.0% | |
| AGATGATCATGCTGGTAATA+AGG | + | chr5_2:7044578-7044597 | Msa0753370:CDS | 35.0% | |
| ATGCTGGTAATAAGGAAACA+GGG | + | chr5_2:7044586-7044605 | Msa0753370:CDS | 35.0% | |
| AGGGGATCATGATGATAAAA+AGG | + | chr5_2:7044605-7044624 | Msa0753370:CDS | 35.0% | |
| ! | CATTTTGTTGCATTAGATGC+TGG | + | chr5_2:7044721-7044740 | Msa0753370:intron | 35.0% |
| GGAAGAAAGTGAAAAGACAA+AGG | + | chr5_2:7044792-7044811 | Msa0753370:CDS | 35.0% | |
| GAGCATGATGAAAGATGAAA+TGG | + | chr5_2:7044892-7044911 | Msa0753370:intron | 35.0% | |
| TACAAGAAGCAATCTTCTGT+TGG | + | chr5_2:7044927-7044946 | Msa0753370:CDS | 35.0% | |
| AGCAATCTTCTGTTGGATTA+TGG | + | chr5_2:7044934-7044953 | Msa0753370:CDS | 35.0% | |
| GCAATCTTCTGTTGGATTAT+GGG | + | chr5_2:7044935-7044954 | Msa0753370:CDS | 35.0% | |
| CATCTCTTCTAGTATAACGA+AGG | - | chr5_2:7045191-7045210 | None:intergenic | 35.0% | |
| TCGTTATACTAGAAGAGATG+CGG | + | chr5_2:7045191-7045210 | Msa0753370:intron | 35.0% | |
| TCAAAAAAGGGAAGAATGTC+TGG | + | chr5_2:7045439-7045458 | Msa0753370:CDS | 35.0% | |
| !! | TGATTCAGTCTTGTTGATGC+TGG | - | chr5_2:7043689-7043708 | None:intergenic | 40.0% |
| ! | TGATTCCTTTTCCACAACAG+GGG | - | chr5_2:7043755-7043774 | None:intergenic | 40.0% |
| ! | CTGATTCCTTTTCCACAACA+GGG | - | chr5_2:7043756-7043775 | None:intergenic | 40.0% |
| ! | TCTGATTCCTTTTCCACAAC+AGG | - | chr5_2:7043757-7043776 | None:intergenic | 40.0% |
| AAGCAATATCAGTATCAGCC+AGG | + | chr5_2:7043783-7043802 | Msa0753370:CDS | 40.0% | |
| !! | CTGATCATCAAGTGTTGAGA+TGG | - | chr5_2:7043824-7043843 | None:intergenic | 40.0% |
| ! | AAACCTTAACTTGGGTTGCT+TGG | + | chr5_2:7044450-7044469 | Msa0753370:intron | 40.0% |
| AAAAGCTCATGCAGTGATCA+GGG | - | chr5_2:7044488-7044507 | None:intergenic | 40.0% | |
| CATGCTGGTAATAAGGAAAC+AGG | + | chr5_2:7044585-7044604 | Msa0753370:CDS | 40.0% | |
| TGCTGGTAATAAGGAAACAG+GGG | + | chr5_2:7044587-7044606 | Msa0753370:CDS | 40.0% | |
| ACAAAGGCAGAAAATAGGCA+AGG | + | chr5_2:7044808-7044827 | Msa0753370:intron | 40.0% | |
| AAAGATGAAATGGTCACGCA+GGG | + | chr5_2:7044902-7044921 | Msa0753370:intron | 40.0% | |
| ATCTTCTGTTGGATTATGGG+AGG | + | chr5_2:7044938-7044957 | Msa0753370:CDS | 40.0% | |
| GGCACAACTCAAGAAATTTG+AGG | + | chr5_2:7044983-7045002 | Msa0753370:CDS | 40.0% | |
| CGTTATACTAGAAGAGATGC+GGG | + | chr5_2:7045192-7045211 | Msa0753370:intron | 40.0% | |
| TCATCTCTTCTAAGCACTCT+TGG | + | chr5_2:7045215-7045234 | Msa0753370:intron | 40.0% | |
| CATCTCTTCTAAGCACTCTT+GGG | + | chr5_2:7045216-7045235 | Msa0753370:intron | 40.0% | |
| ! | ATTTCTTTGGTGCAACTCCA+CGG | - | chr5_2:7045496-7045515 | None:intergenic | 40.0% |
| TAGTTATGACAAGGGTAGGT+GGG | - | chr5_2:7043589-7043608 | None:intergenic | 40.0% | |
| TTAGTTATGACAAGGGTAGG+TGG | - | chr5_2:7043590-7043609 | None:intergenic | 40.0% | |
| !! | TGATTCAGTCTTGTTGATGC+TGG | - | chr5_2:7043689-7043708 | None:intergenic | 40.0% |
| ! | TGATTCCTTTTCCACAACAG+GGG | - | chr5_2:7043755-7043774 | None:intergenic | 40.0% |
| ! | CTGATTCCTTTTCCACAACA+GGG | - | chr5_2:7043756-7043775 | None:intergenic | 40.0% |
| ! | TCTGATTCCTTTTCCACAAC+AGG | - | chr5_2:7043757-7043776 | None:intergenic | 40.0% |
| AAGCAATATCAGTATCAGCC+AGG | + | chr5_2:7043783-7043802 | Msa0753370:CDS | 40.0% | |
| !! | CTGATCATCAAGTGTTGAGA+TGG | - | chr5_2:7043824-7043843 | None:intergenic | 40.0% |
| ! | AAACCTTAACTTGGGTTGCT+TGG | + | chr5_2:7044450-7044469 | Msa0753370:intron | 40.0% |
| AAAAGCTCATGCAGTGATCA+GGG | - | chr5_2:7044488-7044507 | None:intergenic | 40.0% | |
| CATGCTGGTAATAAGGAAAC+AGG | + | chr5_2:7044585-7044604 | Msa0753370:CDS | 40.0% | |
| TGCTGGTAATAAGGAAACAG+GGG | + | chr5_2:7044587-7044606 | Msa0753370:CDS | 40.0% | |
| ACAAAGGCAGAAAATAGGCA+AGG | + | chr5_2:7044808-7044827 | Msa0753370:intron | 40.0% | |
| AAAGATGAAATGGTCACGCA+GGG | + | chr5_2:7044902-7044921 | Msa0753370:intron | 40.0% | |
| ATCTTCTGTTGGATTATGGG+AGG | + | chr5_2:7044938-7044957 | Msa0753370:CDS | 40.0% | |
| GGCACAACTCAAGAAATTTG+AGG | + | chr5_2:7044983-7045002 | Msa0753370:CDS | 40.0% | |
| CGTTATACTAGAAGAGATGC+GGG | + | chr5_2:7045192-7045211 | Msa0753370:intron | 40.0% | |
| TCATCTCTTCTAAGCACTCT+TGG | + | chr5_2:7045215-7045234 | Msa0753370:intron | 40.0% | |
| CATCTCTTCTAAGCACTCTT+GGG | + | chr5_2:7045216-7045235 | Msa0753370:intron | 40.0% | |
| ! | ATTTCTTTGGTGCAACTCCA+CGG | - | chr5_2:7045496-7045515 | None:intergenic | 40.0% |
| CAAGTCATGGGAGAATCAGA+AGG | + | chr5_2:7043661-7043680 | Msa0753370:exon | 45.0% | |
| CAGGGCCGACCTAATATATT+TGG | + | chr5_2:7044205-7044224 | Msa0753370:intron | 45.0% | |
| GGCCGACCTAATATATTTGG+AGG | + | chr5_2:7044208-7044227 | Msa0753370:intron | 45.0% | |
| CAAAAGCTCATGCAGTGATC+AGG | - | chr5_2:7044489-7044508 | None:intergenic | 45.0% | |
| GAAAGATGAAATGGTCACGC+AGG | + | chr5_2:7044901-7044920 | Msa0753370:intron | 45.0% | |
| CGACACATTTCAGTTCCACA+AGG | - | chr5_2:7045108-7045127 | None:intergenic | 45.0% | |
| CGAACTTGTGCATGTAACAG+AGG | - | chr5_2:7045153-7045172 | None:intergenic | 45.0% | |
| CAAGTCATGGGAGAATCAGA+AGG | + | chr5_2:7043661-7043680 | Msa0753370:exon | 45.0% | |
| CAGGGCCGACCTAATATATT+TGG | + | chr5_2:7044205-7044224 | Msa0753370:intron | 45.0% | |
| GGCCGACCTAATATATTTGG+AGG | + | chr5_2:7044208-7044227 | Msa0753370:intron | 45.0% | |
| CAAAAGCTCATGCAGTGATC+AGG | - | chr5_2:7044489-7044508 | None:intergenic | 45.0% | |
| GAAAGATGAAATGGTCACGC+AGG | + | chr5_2:7044901-7044920 | Msa0753370:intron | 45.0% | |
| CGACACATTTCAGTTCCACA+AGG | - | chr5_2:7045108-7045127 | None:intergenic | 45.0% | |
| CGAACTTGTGCATGTAACAG+AGG | - | chr5_2:7045153-7045172 | None:intergenic | 45.0% | |
| ACCACAGCTACAGTCTCTTC+TGG | + | chr5_2:7043708-7043727 | Msa0753370:CDS | 50.0% | |
| TCCAGAAGAGACTGTAGCTG+TGG | - | chr5_2:7043712-7043731 | None:intergenic | 50.0% | |
| GGGAAAGCTCTTCAGGAACA+GGG | - | chr5_2:7043735-7043754 | None:intergenic | 50.0% | |
| ACAACAGGGGAAAGCTCTTC+AGG | - | chr5_2:7043742-7043761 | None:intergenic | 50.0% | |
| TGAAGAGCTTTCCCCTGTTG+TGG | + | chr5_2:7043741-7043760 | Msa0753370:CDS | 50.0% | |
| GCTTTCCCCTGTTGTGGAAA+AGG | + | chr5_2:7043747-7043766 | Msa0753370:CDS | 50.0% | |
| GAGGTTGCAGATGATCATGC+TGG | + | chr5_2:7044570-7044589 | Msa0753370:intron | 50.0% | |
| GACAAATCTCTCGAGCCTTG+TGG | + | chr5_2:7045090-7045109 | Msa0753370:intron | 50.0% | |
| ! | GGAAGAATGTCTGGAGCTAG+AGG | + | chr5_2:7045448-7045467 | Msa0753370:CDS | 50.0% |
| ACCACAGCTACAGTCTCTTC+TGG | + | chr5_2:7043708-7043727 | Msa0753370:CDS | 50.0% | |
| TCCAGAAGAGACTGTAGCTG+TGG | - | chr5_2:7043712-7043731 | None:intergenic | 50.0% | |
| GGGAAAGCTCTTCAGGAACA+GGG | - | chr5_2:7043735-7043754 | None:intergenic | 50.0% | |
| ACAACAGGGGAAAGCTCTTC+AGG | - | chr5_2:7043742-7043761 | None:intergenic | 50.0% | |
| TGAAGAGCTTTCCCCTGTTG+TGG | + | chr5_2:7043741-7043760 | Msa0753370:CDS | 50.0% | |
| GCTTTCCCCTGTTGTGGAAA+AGG | + | chr5_2:7043747-7043766 | Msa0753370:CDS | 50.0% | |
| GAGGTTGCAGATGATCATGC+TGG | + | chr5_2:7044570-7044589 | Msa0753370:intron | 50.0% | |
| GACAAATCTCTCGAGCCTTG+TGG | + | chr5_2:7045090-7045109 | Msa0753370:intron | 50.0% | |
| ! | GGAAGAATGTCTGGAGCTAG+AGG | + | chr5_2:7045448-7045467 | Msa0753370:CDS | 50.0% |
| GGGGAAAGCTCTTCAGGAAC+AGG | - | chr5_2:7043736-7043755 | None:intergenic | 55.0% | |
| GTTGAGATGGCCTGCTGAGT+AGG | - | chr5_2:7043811-7043830 | None:intergenic | 55.0% | |
| GGGCCAAGCAACCCAAGTTA+AGG | - | chr5_2:7044456-7044475 | None:intergenic | 55.0% | |
| ! | AACTTGGGTTGCTTGGCCCT+TGG | + | chr5_2:7044457-7044476 | Msa0753370:intron | 55.0% |
| ! | ACTTGGGTTGCTTGGCCCTT+GGG | + | chr5_2:7044458-7044477 | Msa0753370:intron | 55.0% |
| !! | AGTGATCAGGGTTGGCCCAA+GGG | - | chr5_2:7044476-7044495 | None:intergenic | 55.0% |
| GCTCATGCAGTGATCAGGGT+TGG | - | chr5_2:7044484-7044503 | None:intergenic | 55.0% | |
| GCTAAGGGCTCAACTGACAG+AGG | + | chr5_2:7044630-7044649 | Msa0753370:CDS | 55.0% | |
| GCTGCAAAGTTTCGTAGCCG+TGG | + | chr5_2:7045476-7045495 | Msa0753370:CDS | 55.0% | |
| GGGGAAAGCTCTTCAGGAAC+AGG | - | chr5_2:7043736-7043755 | None:intergenic | 55.0% | |
| GTTGAGATGGCCTGCTGAGT+AGG | - | chr5_2:7043811-7043830 | None:intergenic | 55.0% | |
| GGGCCAAGCAACCCAAGTTA+AGG | - | chr5_2:7044456-7044475 | None:intergenic | 55.0% | |
| ! | AACTTGGGTTGCTTGGCCCT+TGG | + | chr5_2:7044457-7044476 | Msa0753370:intron | 55.0% |
| ! | ACTTGGGTTGCTTGGCCCTT+GGG | + | chr5_2:7044458-7044477 | Msa0753370:intron | 55.0% |
| !! | AGTGATCAGGGTTGGCCCAA+GGG | - | chr5_2:7044476-7044495 | None:intergenic | 55.0% |
| GCTCATGCAGTGATCAGGGT+TGG | - | chr5_2:7044484-7044503 | None:intergenic | 55.0% | |
| GCTAAGGGCTCAACTGACAG+AGG | + | chr5_2:7044630-7044649 | Msa0753370:CDS | 55.0% | |
| GCTGCAAAGTTTCGTAGCCG+TGG | + | chr5_2:7045476-7045495 | Msa0753370:CDS | 55.0% | |
| !! | CAGTGATCAGGGTTGGCCCA+AGG | - | chr5_2:7044477-7044496 | None:intergenic | 60.0% |
| !! | CAGTGATCAGGGTTGGCCCA+AGG | - | chr5_2:7044477-7044496 | None:intergenic | 60.0% |
| CAGCCAGGAGCCTACTCAGC+AGG | + | chr5_2:7043798-7043817 | Msa0753370:CDS | 65.0% | |
| TGGCCTGCTGAGTAGGCTCC+TGG | - | chr5_2:7043804-7043823 | None:intergenic | 65.0% | |
| CAGCCAGGAGCCTACTCAGC+AGG | + | chr5_2:7043798-7043817 | Msa0753370:CDS | 65.0% | |
| TGGCCTGCTGAGTAGGCTCC+TGG | - | chr5_2:7043804-7043823 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 7043588 | 7045699 | 7043588 | ID=Msa0753370;Name=Msa0753370 |
| chr5_2 | mRNA | 7043588 | 7045699 | 7043588 | ID=Msa0753370-mRNA-1;Parent=Msa0753370;Name=Msa0753370-mRNA-1;_AED=0.35;_eAED=0.35;_QI=79|1|1|1|1|1|5|161|209 |
| chr5_2 | exon | 7043588 | 7043844 | 7043588 | ID=Msa0753370-mRNA-1:exon:3099;Parent=Msa0753370-mRNA-1 |
| chr5_2 | exon | 7044571 | 7044651 | 7044571 | ID=Msa0753370-mRNA-1:exon:3100;Parent=Msa0753370-mRNA-1 |
| chr5_2 | exon | 7044737 | 7044824 | 7044737 | ID=Msa0753370-mRNA-1:exon:3101;Parent=Msa0753370-mRNA-1 |
| chr5_2 | exon | 7044923 | 7045004 | 7044923 | ID=Msa0753370-mRNA-1:exon:3102;Parent=Msa0753370-mRNA-1 |
| chr5_2 | exon | 7045338 | 7045699 | 7045338 | ID=Msa0753370-mRNA-1:exon:3103;Parent=Msa0753370-mRNA-1 |
| chr5_2 | five_prime_UTR | 7043588 | 7043666 | 7043588 | ID=Msa0753370-mRNA-1:five_prime_utr;Parent=Msa0753370-mRNA-1 |
| chr5_2 | CDS | 7043667 | 7043844 | 7043667 | ID=Msa0753370-mRNA-1:cds;Parent=Msa0753370-mRNA-1 |
| chr5_2 | CDS | 7044571 | 7044651 | 7044571 | ID=Msa0753370-mRNA-1:cds;Parent=Msa0753370-mRNA-1 |
| chr5_2 | CDS | 7044737 | 7044824 | 7044737 | ID=Msa0753370-mRNA-1:cds;Parent=Msa0753370-mRNA-1 |
| chr5_2 | CDS | 7044923 | 7045004 | 7044923 | ID=Msa0753370-mRNA-1:cds;Parent=Msa0753370-mRNA-1 |
| chr5_2 | CDS | 7045338 | 7045538 | 7045338 | ID=Msa0753370-mRNA-1:cds;Parent=Msa0753370-mRNA-1 |
| chr5_2 | three_prime_UTR | 7045539 | 7045699 | 7045539 | ID=Msa0753370-mRNA-1:three_prime_utr;Parent=Msa0753370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
