Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410510 | A0A396IHY1 | 96.907 | 194 | 6 | 0 | 1 | 194 | 1 | 194 | 4.27e-137 | 390 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008090 | Msa1410510 | 0.802181 | 6.336652e-49 | -8.615850e-47 |
| Msa0008200 | Msa1410510 | 0.804662 | 1.939597e-49 | -8.615850e-47 |
| Msa0029630 | Msa1410510 | 0.823411 | 1.405245e-53 | -8.615850e-47 |
| Msa0030300 | Msa1410510 | 0.854114 | 1.527264e-61 | -8.615850e-47 |
| Msa0037840 | Msa1410510 | 0.823355 | 1.448009e-53 | -8.615850e-47 |
| Msa0038870 | Msa1410510 | 0.842511 | 2.472364e-58 | -8.615850e-47 |
| Msa0043980 | Msa1410510 | 0.817814 | 2.712594e-52 | -8.615850e-47 |
| Msa0051020 | Msa1410510 | 0.805745 | 1.150980e-49 | -8.615850e-47 |
| Msa0051630 | Msa1410510 | 0.826352 | 2.843803e-54 | -8.615850e-47 |
| Msa0051740 | Msa1410510 | 0.829295 | 5.574958e-55 | -8.615850e-47 |
| Msa0051750 | Msa1410510 | 0.838693 | 2.470566e-57 | -8.615850e-47 |
| Msa0068020 | Msa1410510 | 0.810536 | 1.097970e-50 | -8.615850e-47 |
| Msa0077900 | Msa1410510 | 0.833430 | 5.357069e-56 | -8.615850e-47 |
| Msa0083280 | Msa1410510 | 0.810475 | 1.131482e-50 | -8.615850e-47 |
| Msa0084080 | Msa1410510 | 0.807985 | 3.867261e-50 | -8.615850e-47 |
| Msa0086420 | Msa1410510 | 0.841413 | 4.823662e-58 | -8.615850e-47 |
| Msa0090360 | Msa1410510 | 0.821900 | 3.156451e-53 | -8.615850e-47 |
| Msa0090550 | Msa1410510 | 0.834729 | 2.532272e-56 | -8.615850e-47 |
| Msa0091610 | Msa1410510 | 0.832958 | 7.023228e-56 | -8.615850e-47 |
| Msa0095360 | Msa1410510 | 0.812208 | 4.758492e-51 | -8.615850e-47 |
| Msa0095770 | Msa1410510 | 0.808265 | 3.371765e-50 | -8.615850e-47 |
| Msa0101270 | Msa1410510 | 0.810898 | 9.165178e-51 | -8.615850e-47 |
| Msa0103790 | Msa1410510 | 0.812648 | 3.814494e-51 | -8.615850e-47 |
| Msa0115370 | Msa1410510 | 0.820824 | 5.591651e-53 | -8.615850e-47 |
| Msa0115990 | Msa1410510 | 0.810957 | 8.901585e-51 | -8.615850e-47 |
| Msa1346730 | Msa1410510 | 0.805700 | 1.176000e-49 | -8.615850e-47 |
| Msa1357190 | Msa1410510 | 0.964025 | 8.256155e-123 | -8.615850e-47 |
| Msa1359560 | Msa1410510 | 0.805425 | 1.342965e-49 | -8.615850e-47 |
| Msa1362420 | Msa1410510 | 0.835928 | 1.260826e-56 | -8.615850e-47 |
| Msa1367590 | Msa1410510 | 0.802090 | 6.616709e-49 | -8.615850e-47 |
| Msa1370590 | Msa1410510 | 0.813744 | 2.192488e-51 | -8.615850e-47 |
| Msa1372290 | Msa1410510 | 0.820392 | 7.029130e-53 | -8.615850e-47 |
| Msa1373850 | Msa1410510 | 0.807786 | 4.264396e-50 | -8.615850e-47 |
| Msa1377820 | Msa1410510 | 0.812135 | 4.935717e-51 | -8.615850e-47 |
| Msa1378410 | Msa1410510 | 0.816029 | 6.824201e-52 | -8.615850e-47 |
| Msa1382020 | Msa1410510 | 0.812000 | 5.283954e-51 | -8.615850e-47 |
| Msa1384100 | Msa1410510 | 0.809938 | 1.477274e-50 | -8.615850e-47 |
| Msa1389850 | Msa1410510 | 0.829449 | 5.117240e-55 | -8.615850e-47 |
| Msa1389880 | Msa1410510 | 0.809859 | 1.535989e-50 | -8.615850e-47 |
| Msa1397120 | Msa1410510 | 0.806970 | 6.351944e-50 | -8.615850e-47 |
| Msa1403890 | Msa1410510 | 0.805445 | 1.330480e-49 | -8.615850e-47 |
| Msa1404300 | Msa1410510 | 0.819341 | 1.222309e-52 | -8.615850e-47 |
| Msa1404940 | Msa1410510 | 0.814731 | 1.327184e-51 | -8.615850e-47 |
| Msa1407190 | Msa1410510 | 0.808297 | 3.319642e-50 | -8.615850e-47 |
| Msa1410510 | Msa1416260 | 0.809357 | 1.969536e-50 | -8.615850e-47 |
| Msa1410510 | Msa1418340 | 0.811418 | 7.071328e-51 | -8.615850e-47 |
| Msa1410510 | Msa1426570 | 0.815063 | 1.119731e-51 | -8.615850e-47 |
| Msa1410510 | Msa1428780 | 0.816716 | 4.790809e-52 | -8.615850e-47 |
| Msa1410510 | Msa1432130 | 0.803966 | 2.708829e-49 | -8.615850e-47 |
| Msa1410510 | Msa1433390 | 0.823805 | 1.136300e-53 | -8.615850e-47 |
| Msa1410510 | Msa1442790 | 0.814226 | 1.716161e-51 | -8.615850e-47 |
| Msa1410510 | Msa1444120 | 0.809856 | 1.538434e-50 | -8.615850e-47 |
| Msa1410510 | Msa1450720 | 0.812691 | 3.731900e-51 | -8.615850e-47 |
| Msa1410510 | Msa1458290 | 0.811775 | 5.913967e-51 | -8.615850e-47 |
| Msa1410510 | Msa1458610 | 0.834253 | 3.335348e-56 | -8.615850e-47 |
| Msa1410510 | Msa1458810 | 0.804306 | 2.301573e-49 | -8.615850e-47 |
| Msa1410510 | Msa1459960 | 0.801964 | 7.023329e-49 | -8.615850e-47 |
| Msa0603570 | Msa1410510 | 0.813390 | 2.622110e-51 | -8.615850e-47 |
| Msa0604290 | Msa1410510 | 0.803466 | 3.439046e-49 | -8.615850e-47 |
| Msa0610250 | Msa1410510 | 0.810611 | 1.057787e-50 | -8.615850e-47 |
| Msa0620230 | Msa1410510 | 0.801906 | 7.218312e-49 | -8.615850e-47 |
| Msa0620330 | Msa1410510 | 0.819757 | 9.822152e-53 | -8.615850e-47 |
| Msa0622790 | Msa1410510 | 0.820182 | 7.851769e-53 | -8.615850e-47 |
| Msa0623990 | Msa1410510 | 0.805089 | 1.579876e-49 | -8.615850e-47 |
| Msa0624060 | Msa1410510 | 0.821105 | 4.818270e-53 | -8.615850e-47 |
| Msa0640940 | Msa1410510 | 0.800614 | 1.327117e-48 | -8.615850e-47 |
| Msa0642970 | Msa1410510 | 0.833978 | 3.908743e-56 | -8.615850e-47 |
| Msa0647950 | Msa1410510 | 0.803739 | 3.019087e-49 | -8.615850e-47 |
| Msa0657120 | Msa1410510 | 0.811091 | 8.325109e-51 | -8.615850e-47 |
| Msa0662630 | Msa1410510 | 0.808500 | 3.004576e-50 | -8.615850e-47 |
| Msa0676130 | Msa1410510 | 0.818178 | 2.244545e-52 | -8.615850e-47 |
| Msa0676180 | Msa1410510 | 0.808554 | 2.925475e-50 | -8.615850e-47 |
| Msa0677530 | Msa1410510 | 0.804732 | 1.875283e-49 | -8.615850e-47 |
| Msa0679360 | Msa1410510 | 0.810386 | 1.182543e-50 | -8.615850e-47 |
| Msa0682680 | Msa1410510 | 0.819901 | 9.104291e-53 | -8.615850e-47 |
| Msa0689500 | Msa1410510 | 0.807676 | 4.499240e-50 | -8.615850e-47 |
| Msa0701100 | Msa1410510 | 0.821948 | 3.076906e-53 | -8.615850e-47 |
| Msa0703440 | Msa1410510 | 0.810390 | 1.180324e-50 | -8.615850e-47 |
| Msa0709160 | Msa1410510 | 0.803766 | 2.980382e-49 | -8.615850e-47 |
| Msa0726080 | Msa1410510 | 0.846220 | 2.490487e-59 | -8.615850e-47 |
| Msa0740510 | Msa1410510 | 0.807295 | 5.421283e-50 | -8.615850e-47 |
| Msa0743530 | Msa1410510 | 0.807566 | 4.748316e-50 | -8.615850e-47 |
| Msa0746170 | Msa1410510 | 0.808019 | 3.804527e-50 | -8.615850e-47 |
| Msa0746210 | Msa1410510 | 0.809820 | 1.566522e-50 | -8.615850e-47 |
| Msa0748430 | Msa1410510 | 0.802965 | 4.367038e-49 | -8.615850e-47 |
| Msa0752700 | Msa1410510 | 0.849541 | 3.027649e-60 | -8.615850e-47 |
| Msa0773590 | Msa1410510 | 0.816240 | 6.122472e-52 | -8.615850e-47 |
| Msa0794970 | Msa1410510 | 0.853454 | 2.365015e-61 | -8.615850e-47 |
| Msa0800370 | Msa1410510 | 0.816300 | 5.938555e-52 | -8.615850e-47 |
| Msa0803590 | Msa1410510 | 0.810172 | 1.315766e-50 | -8.615850e-47 |
| Msa0811040 | Msa1410510 | 0.807799 | 4.235909e-50 | -8.615850e-47 |
| Msa0820770 | Msa1410510 | 0.801318 | 9.526361e-49 | -8.615850e-47 |
| Msa0822180 | Msa1410510 | 0.805871 | 1.082624e-49 | -8.615850e-47 |
| Msa0829220 | Msa1410510 | 0.819446 | 1.156286e-52 | -8.615850e-47 |
| Msa0831100 | Msa1410510 | 0.851986 | 6.205230e-61 | -8.615850e-47 |
| Msa0125450 | Msa1410510 | 0.828807 | 7.320015e-55 | -8.615850e-47 |
| Msa0125540 | Msa1410510 | 0.821709 | 3.495398e-53 | -8.615850e-47 |
| Msa0136120 | Msa1410510 | 0.823931 | 1.061619e-53 | -8.615850e-47 |
| Msa0137840 | Msa1410510 | 0.823672 | 1.221133e-53 | -8.615850e-47 |
| Msa0142500 | Msa1410510 | 0.805763 | 1.140641e-49 | -8.615850e-47 |
| Msa0145580 | Msa1410510 | 0.806670 | 7.349437e-50 | -8.615850e-47 |
| Msa0146080 | Msa1410510 | 0.821928 | 3.111207e-53 | -8.615850e-47 |
| Msa0150260 | Msa1410510 | 0.804391 | 2.208933e-49 | -8.615850e-47 |
| Msa0167980 | Msa1410510 | 0.805282 | 1.439300e-49 | -8.615850e-47 |
| Msa0175540 | Msa1410510 | 0.800511 | 1.392872e-48 | -8.615850e-47 |
| Msa0183870 | Msa1410510 | 0.830986 | 2.155618e-55 | -8.615850e-47 |
| Msa0184040 | Msa1410510 | 0.820992 | 5.116774e-53 | -8.615850e-47 |
| Msa0187490 | Msa1410510 | 0.812729 | 3.661517e-51 | -8.615850e-47 |
| Msa0207030 | Msa1410510 | 0.822479 | 2.317194e-53 | -8.615850e-47 |
| Msa0209350 | Msa1410510 | 0.806577 | 7.690124e-50 | -8.615850e-47 |
| Msa0209500 | Msa1410510 | 0.802517 | 5.404241e-49 | -8.615850e-47 |
| Msa0223330 | Msa1410510 | 0.811562 | 6.581241e-51 | -8.615850e-47 |
| Msa0237200 | Msa1410510 | 0.827621 | 1.414064e-54 | -8.615850e-47 |
| Msa1227460 | Msa1410510 | 0.800294 | 1.541540e-48 | -8.615850e-47 |
| Msa1233850 | Msa1410510 | 0.826596 | 2.487794e-54 | -8.615850e-47 |
| Msa1250110 | Msa1410510 | 0.803721 | 3.045685e-49 | -8.615850e-47 |
| Msa1250530 | Msa1410510 | 0.816755 | 4.695816e-52 | -8.615850e-47 |
| Msa1270420 | Msa1410510 | 0.803186 | 3.930748e-49 | -8.615850e-47 |
| Msa1270660 | Msa1410510 | 0.821418 | 4.079682e-53 | -8.615850e-47 |
| Msa1276150 | Msa1410510 | 0.812586 | 3.934914e-51 | -8.615850e-47 |
| Msa1278900 | Msa1410510 | 0.812145 | 4.912971e-51 | -8.615850e-47 |
| Msa1297530 | Msa1410510 | 0.817966 | 2.506744e-52 | -8.615850e-47 |
| Msa1305660 | Msa1410510 | 0.808125 | 3.612241e-50 | -8.615850e-47 |
| Msa1307180 | Msa1410510 | 0.830435 | 2.942453e-55 | -8.615850e-47 |
| Msa1315750 | Msa1410510 | 0.816950 | 4.245244e-52 | -8.615850e-47 |
| Msa1316360 | Msa1410510 | 0.816555 | 5.207098e-52 | -8.615850e-47 |
| Msa1331320 | Msa1410510 | 0.814836 | 1.257597e-51 | -8.615850e-47 |
| Msa1331350 | Msa1410510 | 0.828483 | 8.767943e-55 | -8.615850e-47 |
| Msa1336560 | Msa1410510 | 0.818758 | 1.658354e-52 | -8.615850e-47 |
| Msa0376910 | Msa1410510 | 0.825495 | 4.543591e-54 | -8.615850e-47 |
| Msa0378970 | Msa1410510 | 0.810269 | 1.253397e-50 | -8.615850e-47 |
| Msa0382310 | Msa1410510 | 0.810446 | 1.148255e-50 | -8.615850e-47 |
| Msa0385500 | Msa1410510 | 0.820011 | 8.590888e-53 | -8.615850e-47 |
| Msa0392270 | Msa1410510 | 0.812014 | 5.246885e-51 | -8.615850e-47 |
| Msa0408390 | Msa1410510 | 0.810658 | 1.033212e-50 | -8.615850e-47 |
| Msa0419720 | Msa1410510 | 0.810054 | 1.394936e-50 | -8.615850e-47 |
| Msa0431210 | Msa1410510 | 0.813768 | 2.166044e-51 | -8.615850e-47 |
| Msa0432500 | Msa1410510 | 0.808309 | 3.299594e-50 | -8.615850e-47 |
| Msa0443430 | Msa1410510 | 0.821397 | 4.125842e-53 | -8.615850e-47 |
| Msa0467780 | Msa1410510 | 0.802145 | 6.447241e-49 | -8.615850e-47 |
| Msa0471900 | Msa1410510 | 0.807341 | 5.299404e-50 | -8.615850e-47 |
| Msa0482040 | Msa1410510 | 0.823295 | 1.495637e-53 | -8.615850e-47 |
| Msa0980540 | Msa1410510 | 0.806951 | 6.408703e-50 | -8.615850e-47 |
| Msa0990580 | Msa1410510 | 0.801565 | 8.478743e-49 | -8.615850e-47 |
| Msa0992580 | Msa1410510 | 0.813881 | 2.044349e-51 | -8.615850e-47 |
| Msa0992600 | Msa1410510 | 0.801478 | 8.836783e-49 | -8.615850e-47 |
| Msa1013110 | Msa1410510 | 0.805326 | 1.408687e-49 | -8.615850e-47 |
| Msa1023920 | Msa1410510 | 0.803644 | 3.159444e-49 | -8.615850e-47 |
| Msa1024750 | Msa1410510 | 0.807523 | 4.848663e-50 | -8.615850e-47 |
| Msa1031770 | Msa1410510 | 0.818773 | 1.645302e-52 | -8.615850e-47 |
| Msa1034150 | Msa1410510 | 0.811647 | 6.307039e-51 | -8.615850e-47 |
| Msa1036300 | Msa1410510 | 0.814290 | 1.660998e-51 | -8.615850e-47 |
| Msa1037520 | Msa1410510 | 0.807846 | 4.140054e-50 | -8.615850e-47 |
| Msa1042660 | Msa1410510 | 0.824638 | 7.242702e-54 | -8.615850e-47 |
| Msa1063420 | Msa1410510 | 0.814217 | 1.723898e-51 | -8.615850e-47 |
| Msa1072900 | Msa1410510 | 0.809319 | 2.006635e-50 | -8.615850e-47 |
| Msa1078420 | Msa1410510 | 0.805047 | 1.612009e-49 | -8.615850e-47 |
| Msa1080270 | Msa1410510 | 0.815363 | 9.608489e-52 | -8.615850e-47 |
| Msa1087480 | Msa1410510 | 0.801427 | 9.051889e-49 | -8.615850e-47 |
| Msa0244980 | Msa1410510 | 0.811631 | 6.356951e-51 | -8.615850e-47 |
| Msa0249580 | Msa1410510 | 0.801790 | 7.623923e-49 | -8.615850e-47 |
| Msa0257490 | Msa1410510 | 0.826023 | 3.404891e-54 | -8.615850e-47 |
| Msa0269470 | Msa1410510 | 0.803852 | 2.859804e-49 | -8.615850e-47 |
| Msa0274970 | Msa1410510 | 0.824844 | 6.476804e-54 | -8.615850e-47 |
| Msa0285330 | Msa1410510 | 0.845111 | 4.978618e-59 | -8.615850e-47 |
| Msa0296790 | Msa1410510 | 0.818134 | 2.296677e-52 | -8.615850e-47 |
| Msa0296920 | Msa1410510 | 0.805997 | 1.018894e-49 | -8.615850e-47 |
| Msa0303460 | Msa1410510 | 0.811699 | 6.144091e-51 | -8.615850e-47 |
| Msa0310430 | Msa1410510 | 0.821101 | 4.829550e-53 | -8.615850e-47 |
| Msa0311720 | Msa1410510 | 0.806461 | 8.132914e-50 | -8.615850e-47 |
| Msa0315680 | Msa1410510 | 0.820142 | 8.020441e-53 | -8.615850e-47 |
| Msa0315850 | Msa1410510 | 0.825442 | 4.677154e-54 | -8.615850e-47 |
| Msa0324240 | Msa1410510 | 0.831180 | 1.932396e-55 | -8.615850e-47 |
| Msa0342290 | Msa1410510 | 0.802845 | 4.622821e-49 | -8.615850e-47 |
| Msa0363640 | Msa1410510 | 0.826901 | 2.103256e-54 | -8.615850e-47 |
| Msa1107900 | Msa1410510 | 0.808426 | 3.116120e-50 | -8.615850e-47 |
| Msa1123350 | Msa1410510 | 0.806546 | 7.803907e-50 | -8.615850e-47 |
| Msa1130530 | Msa1410510 | 0.814914 | 1.208837e-51 | -8.615850e-47 |
| Msa1130980 | Msa1410510 | 0.810426 | 1.159669e-50 | -8.615850e-47 |
| Msa1131490 | Msa1410510 | 0.804284 | 2.326028e-49 | -8.615850e-47 |
| Msa1168580 | Msa1410510 | 0.819262 | 1.273534e-52 | -8.615850e-47 |
| Msa1169530 | Msa1410510 | 0.818006 | 2.454827e-52 | -8.615850e-47 |
| Msa1169550 | Msa1410510 | 0.805986 | 1.023937e-49 | -8.615850e-47 |
| Msa1178060 | Msa1410510 | 0.822286 | 2.569565e-53 | -8.615850e-47 |
| Msa1178580 | Msa1410510 | 0.812157 | 4.883537e-51 | -8.615850e-47 |
| Msa1205590 | Msa1410510 | 0.833035 | 6.720950e-56 | -8.615850e-47 |
| Msa1206650 | Msa1410510 | 0.852245 | 5.240480e-61 | -8.615850e-47 |
| Msa1207310 | Msa1410510 | 0.803746 | 3.009107e-49 | -8.615850e-47 |
| Msa1211830 | Msa1410510 | 0.805184 | 1.508657e-49 | -8.615850e-47 |
| Msa1212950 | Msa1410510 | 0.808999 | 2.349710e-50 | -8.615850e-47 |
| Msa0482940 | Msa1410510 | 0.807248 | 5.546024e-50 | -8.615850e-47 |
| Msa0484740 | Msa1410510 | 0.835327 | 1.790047e-56 | -8.615850e-47 |
| Msa0489660 | Msa1410510 | 0.825678 | 4.111156e-54 | -8.615850e-47 |
| Msa0491000 | Msa1410510 | 0.803162 | 3.977015e-49 | -8.615850e-47 |
| Msa0520270 | Msa1410510 | 0.803104 | 4.087072e-49 | -8.615850e-47 |
| Msa0542290 | Msa1410510 | 0.837878 | 4.007227e-57 | -8.615850e-47 |
| Msa0542560 | Msa1410510 | 0.812106 | 5.010243e-51 | -8.615850e-47 |
| Msa0544840 | Msa1410510 | 0.819284 | 1.259196e-52 | -8.615850e-47 |
| Msa0547160 | Msa1410510 | 0.829955 | 3.852223e-55 | -8.615850e-47 |
| Msa0547990 | Msa1410510 | 0.813084 | 3.061820e-51 | -8.615850e-47 |
| Msa0556060 | Msa1410510 | 0.800944 | 1.136134e-48 | -8.615850e-47 |
| Msa0564130 | Msa1410510 | 0.811003 | 8.699821e-51 | -8.615850e-47 |
| Msa0566350 | Msa1410510 | 0.822570 | 2.206672e-53 | -8.615850e-47 |
| Msa0566750 | Msa1410510 | 0.809336 | 1.989856e-50 | -8.615850e-47 |
| Msa0600450 | Msa1410510 | 0.822501 | 2.290797e-53 | -8.615850e-47 |
| Msa0842770 | Msa1410510 | 0.815661 | 8.245481e-52 | -8.615850e-47 |
| Msa0844280 | Msa1410510 | 0.820268 | 7.502401e-53 | -8.615850e-47 |
| Msa0846230 | Msa1410510 | 0.846138 | 2.621639e-59 | -8.615850e-47 |
| Msa0861090 | Msa1410510 | 0.807437 | 5.057400e-50 | -8.615850e-47 |
| Msa0866400 | Msa1410510 | 0.825708 | 4.045886e-54 | -8.615850e-47 |
| Msa0866410 | Msa1410510 | 0.818732 | 1.681442e-52 | -8.615850e-47 |
| Msa0880450 | Msa1410510 | 0.801635 | 8.203860e-49 | -8.615850e-47 |
| Msa0905750 | Msa1410510 | 0.805137 | 1.543795e-49 | -8.615850e-47 |
| Msa0930140 | Msa1410510 | 0.811851 | 5.692364e-51 | -8.615850e-47 |
| Msa0932570 | Msa1410510 | 0.813215 | 2.864839e-51 | -8.615850e-47 |
| Msa0957870 | Msa1410510 | 0.835056 | 2.094981e-56 | -8.615850e-47 |
| Msa0957970 | Msa1410510 | 0.827575 | 1.450319e-54 | -8.615850e-47 |
| Msa0970600 | Msa1410510 | 0.801769 | 7.700097e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410510 | MtrunA17_Chr4g0063521 | 96.907 | 194 | 6 | 0 | 1 | 194 | 1 | 194 | 8.22e-141 | 390 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1410510 | AT5G20120.1 | 63.736 | 182 | 60 | 2 | 13 | 194 | 13 | 188 | 3.65e-70 | 211 |
| Msa1410510 | AT5G20120.2 | 63.736 | 182 | 60 | 2 | 13 | 194 | 13 | 188 | 3.65e-70 | 211 |
Find 87 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGCTTTGTGGCCAATT+TGG | 0.157438 | tig0023670:-10111 | Msa1410510:CDS |
| CCTTTGCCCCTTCCTCCAAC+TGG | 0.206144 | tig0023670:-12091 | Msa1410510:five_prime_UTR |
| TTAGCTGGATTCTGGATAAT+TGG | 0.214536 | tig0023670:-11872 | Msa1410510:five_prime_UTR |
| TTTCTTGACGATTCCTCTTC+TGG | 0.249847 | tig0023670:-10086 | Msa1410510:intron |
| CATGGATAAATTTCAATCTA+AGG | 0.268041 | tig0023670:+11900 | None:intergenic |
| GATGAAGCATTACTCGAAAT+TGG | 0.276916 | tig0023670:+12061 | None:intergenic |
| AATTATTATTTGAAGAGTTT+TGG | 0.281508 | tig0023670:-11976 | Msa1410510:five_prime_UTR |
| CATGATGTGCTTTCCTAAAC+TGG | 0.298614 | tig0023670:-9748 | Msa1410510:three_prime_UTR |
| CTTACTGTTAGTACCAGTTT+AGG | 0.299339 | tig0023670:+9735 | None:intergenic |
| ATATACCTTGGAACTTAGTT+TGG | 0.321666 | tig0023670:-12228 | Msa1410510:five_prime_UTR |
| CTAGGTTCACCTTTGCTTTG+TGG | 0.328652 | tig0023670:-10120 | Msa1410510:intron |
| GCACAGGAGATATATGAAAT+TGG | 0.329409 | tig0023670:+11432 | None:intergenic |
| TGCCTCCGAGTCCTCCTAAA+AGG | 0.336735 | tig0023670:-11531 | Msa1410510:CDS |
| TGTGCAGTTTACACTATTCA+TGG | 0.346494 | tig0023670:-9962 | Msa1410510:intron |
| ATCAGTTGCATTGCAATGTC+TGG | 0.346771 | tig0023670:-11664 | Msa1410510:exon |
| CCTCTATATCTTGGGATGAT+AGG | 0.347964 | tig0023670:-10386 | Msa1410510:CDS |
| TGCAGACTGCCTCTATATCT+TGG | 0.356363 | tig0023670:-10395 | Msa1410510:intron |
| TTGCCATTCGCCACTGGATT+CGG | 0.365198 | tig0023670:-10251 | Msa1410510:CDS |
| GGAACACCGGTTGGGGCAGG+TGG | 0.367107 | tig0023670:-11640 | Msa1410510:CDS |
| TTTGAATTAGATTGAAAGAA+AGG | 0.367409 | tig0023670:+12147 | None:intergenic |
| AACATACACCAATGGTTGAT+TGG | 0.377050 | tig0023670:-9810 | Msa1410510:three_prime_UTR |
| TTTCATTTATACAAGTATCT+TGG | 0.379944 | tig0023670:-10342 | Msa1410510:CDS |
| GAGATATAGGACTTGTTTGT+TGG | 0.384535 | tig0023670:-9632 | Msa1410510:three_prime_UTR |
| AAGTAGTACCGTAACTTAAC+AGG | 0.389238 | tig0023670:-12264 | Msa1410510:five_prime_UTR |
| ATGAAGTATTAGCTGGATTC+TGG | 0.389245 | tig0023670:-11880 | Msa1410510:five_prime_UTR |
| AAGTGTTTAGCTTTATCAAT+TGG | 0.410506 | tig0023670:-9602 | Msa1410510:three_prime_UTR |
| TAGCTGGATTCTGGATAATT+GGG | 0.412206 | tig0023670:-11871 | Msa1410510:five_prime_UTR |
| CTTTGCCCCTTCCTCCAACT+GGG | 0.420018 | tig0023670:-12090 | Msa1410510:five_prime_UTR |
| TATCTTGGGATGATAGGTAT+TGG | 0.427837 | tig0023670:-10380 | Msa1410510:CDS |
| TTTATCCATGAAGTATTAGC+TGG | 0.429713 | tig0023670:-11887 | Msa1410510:five_prime_UTR |
| AGAATCCAGCTAATACTTCA+TGG | 0.432959 | tig0023670:+11882 | None:intergenic |
| AATGAGGCAGAGACATAGCC+AGG | 0.433939 | tig0023670:-11614 | Msa1410510:CDS |
| ATTCTTATTCAAATCCCAAT+TGG | 0.441251 | tig0023670:-12027 | Msa1410510:five_prime_UTR |
| TGCTACAGGTAGAGAGATAT+AGG | 0.446500 | tig0023670:-9645 | Msa1410510:three_prime_UTR |
| TGGAGGTTATGATGATTCCT+AGG | 0.448551 | tig0023670:-11956 | Msa1410510:five_prime_UTR |
| GTTTGTTTCTTACAAGCAAA+AGG | 0.450655 | tig0023670:+10220 | None:intergenic |
| GGGAACCCAGTTGGAGGAAG+GGG | 0.452963 | tig0023670:+12085 | None:intergenic |
| ATCGTCAAGAAACTCCAAAT+TGG | 0.465863 | tig0023670:+10097 | None:intergenic |
| TTTATACAAGTATCTTGGCT+TGG | 0.469511 | tig0023670:-10337 | Msa1410510:CDS |
| GCAGACTGCCTCTATATCTT+GGG | 0.469604 | tig0023670:-10394 | Msa1410510:intron |
| AAAATGGGGATTAAAGAAAT+GGG | 0.471320 | tig0023670:-10294 | Msa1410510:CDS |
| TGATTGGTAGCTTTGTTATG+TGG | 0.472329 | tig0023670:-9794 | Msa1410510:three_prime_UTR |
| ATTAAACCACCTGCCCCAAC+CGG | 0.474646 | tig0023670:+11634 | None:intergenic |
| CCTATCATCCCAAGATATAG+AGG | 0.476285 | tig0023670:+10386 | None:intergenic |
| TCAACACTGATGTAATTGTA+AGG | 0.493625 | tig0023670:+9694 | None:intergenic |
| CGGCTGGTCTTAGTTGCTAC+AGG | 0.494496 | tig0023670:-9659 | Msa1410510:three_prime_UTR |
| TTCAATCTAATTCAAATCGA+AGG | 0.497115 | tig0023670:-12140 | Msa1410510:five_prime_UTR |
| TGCTAGTAGTGGTGATGACT+TGG | 0.501772 | tig0023670:-11587 | Msa1410510:CDS |
| GCCATGACGATCGTATTAGA+AGG | 0.509433 | tig0023670:-11411 | Msa1410510:intron |
| TCAGTTGCATTGCAATGTCT+GGG | 0.511639 | tig0023670:-11663 | Msa1410510:exon |
| ACAGTGTTGCCATTCGCCAC+TGG | 0.512752 | tig0023670:-10257 | Msa1410510:CDS |
| TTGAGTGATGGTGACGCGGC+TGG | 0.516290 | tig0023670:-9675 | Msa1410510:three_prime_UTR |
| TTGGGGCAGGTGGTTTAATG+AGG | 0.517419 | tig0023670:-11630 | Msa1410510:CDS |
| AGGGAACCCAGTTGGAGGAA+GGG | 0.520268 | tig0023670:+12084 | None:intergenic |
| GAGGGAACCCAGTTGGAGGA+AGG | 0.526601 | tig0023670:+12083 | None:intergenic |
| CTCTCTGATATGATATACCT+TGG | 0.526837 | tig0023670:-12240 | Msa1410510:five_prime_UTR |
| CAGAGAGACCTGTTAAGTTA+CGG | 0.527737 | tig0023670:+12256 | None:intergenic |
| CCAGTTGGAGGAAGGGGCAA+AGG | 0.537874 | tig0023670:+12091 | None:intergenic |
| CGAGTCCTCCTAAAAGGACA+TGG | 0.538660 | tig0023670:-11525 | Msa1410510:CDS |
| TCTTGGCTTGGAGCGTTCGA+AGG | 0.539897 | tig0023670:-10325 | Msa1410510:CDS |
| TTATGATATCATCAAACTGA+AGG | 0.551120 | tig0023670:+9576 | None:intergenic |
| TAATACGATCGTCATGGCAC+AGG | 0.555324 | tig0023670:+11416 | None:intergenic |
| GGAATTCATCATTCTGAGGC+CGG | 0.559074 | tig0023670:+9896 | None:intergenic |
| TACACTATTCATGGCATGCA+TGG | 0.561683 | tig0023670:-9953 | Msa1410510:CDS |
| TTGTTGATACATACCAGAAG+AGG | 0.562376 | tig0023670:+10073 | None:intergenic |
| TGGAAGACGATGCATGTTCG+AGG | 0.564813 | tig0023670:-11567 | Msa1410510:CDS |
| CAAAGCTACCAATCAACCAT+TGG | 0.567421 | tig0023670:+9802 | None:intergenic |
| GAAGCATTACTCGAAATTGG+AGG | 0.578172 | tig0023670:+12064 | None:intergenic |
| ATTGGAGGGAACCCAGTTGG+AGG | 0.586280 | tig0023670:+12079 | None:intergenic |
| GAGTACCAAACTAAGTTCCA+AGG | 0.596276 | tig0023670:+12223 | None:intergenic |
| GAAATTGGAGGGAACCCAGT+TGG | 0.598311 | tig0023670:+12076 | None:intergenic |
| ATTCCGAATCCAGTGGCGAA+TGG | 0.603263 | tig0023670:+10248 | None:intergenic |
| CCAAATTGGCCACAAAGCAA+AGG | 0.609872 | tig0023670:+10111 | None:intergenic |
| AAGCATTACTCGAAATTGGA+GGG | 0.624315 | tig0023670:+12065 | None:intergenic |
| CAGTTGCATTGCAATGTCTG+GGG | 0.625521 | tig0023670:-11662 | Msa1410510:exon |
| AGCCAGGGTTATGCTAGTAG+TGG | 0.628875 | tig0023670:-11598 | Msa1410510:CDS |
| AAGTTTCTAACATACACCAA+TGG | 0.631822 | tig0023670:-9818 | Msa1410510:three_prime_UTR |
| CACCACTACTAGCATAACCC+TGG | 0.638272 | tig0023670:+11596 | None:intergenic |
| AGTTGCATTGCAATGTCTGG+GGG | 0.643653 | tig0023670:-11661 | Msa1410510:exon |
| ACCTTCTAATACGATCGTCA+TGG | 0.649054 | tig0023670:+11410 | None:intergenic |
| GTACGGAATTCATCATTCTG+AGG | 0.654930 | tig0023670:+9892 | None:intergenic |
| TGTTTCTTACAAGCAAAAGG+AGG | 0.657267 | tig0023670:+10223 | None:intergenic |
| ACTATTCATGGCATGCATGG+TGG | 0.676070 | tig0023670:-9950 | Msa1410510:CDS |
| AGTGTTGAGTGATGGTGACG+CGG | 0.684398 | tig0023670:-9679 | Msa1410510:three_prime_UTR |
| ATTACATCAGTGTTGAGTGA+TGG | 0.688307 | tig0023670:-9687 | Msa1410510:three_prime_UTR |
| GGAGGTGATTCCGAATCCAG+TGG | 0.689356 | tig0023670:+10241 | None:intergenic |
| ATGAGGCAGAGACATAGCCA+GGG | 0.708201 | tig0023670:-11613 | Msa1410510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATACCAATT+GGG | + | tig0023670:9791-9810 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAATACCAAT+TGG | + | tig0023670:9792-9811 | None:intergenic | 10.0% |
| !!! | TTTTTAGTTGTATTTATAAA+CGG | - | tig0023670:10451-10470 | Msa1410510:intron | 10.0% |
| !!! | AATTATTATTTGAAGAGTTT+TGG | - | tig0023670:9825-9844 | Msa1410510:three_prime_UTR | 15.0% |
| !! | ACGACAAAAATAAAATTAAA+GGG | - | tig0023670:10726-10745 | Msa1410510:intron | 15.0% |
| !! | TTTGAATTAGATTGAAAGAA+AGG | + | tig0023670:9657-9676 | None:intergenic | 20.0% |
| !!! | ATAATTGTTTGGTTAGTTTT+CGG | - | tig0023670:10069-10088 | Msa1410510:intron | 20.0% |
| !! | CACGACAAAAATAAAATTAA+AGG | - | tig0023670:10725-10744 | Msa1410510:intron | 20.0% |
| !! | AATTTAGAGGAAAAATAAGA+GGG | + | tig0023670:10924-10943 | None:intergenic | 20.0% |
| !! | AAATTTAGAGGAAAAATAAG+AGG | + | tig0023670:10925-10944 | None:intergenic | 20.0% |
| !!! | TCTTATTTTTCCTCTAAATT+TGG | - | tig0023670:10924-10943 | Msa1410510:intron | 20.0% |
| !!! | TGTTTAAAATCCAAATTTAG+AGG | + | tig0023670:10937-10956 | None:intergenic | 20.0% |
| !!! | TATGAACTGATTTTATGTTT+AGG | + | tig0023670:11065-11084 | None:intergenic | 20.0% |
| !! | TACTTATATAATAGGAAAGA+GGG | + | tig0023670:11220-11239 | None:intergenic | 20.0% |
| !! | TTTCATTTATACAAGTATCT+TGG | - | tig0023670:11459-11478 | Msa1410510:CDS | 20.0% |
| !! | AAGTAATAAAACATAGTAAG+CGG | + | tig0023670:11764-11783 | None:intergenic | 20.0% |
| !!! | GTTATCACAATTTCAATTTT+TGG | + | tig0023670:11800-11819 | None:intergenic | 20.0% |
| ! | TTCAATCTAATTCAAATCGA+AGG | - | tig0023670:9661-9680 | Msa1410510:three_prime_UTR | 25.0% |
| ! | ATTCTTATTCAAATCCCAAT+TGG | - | tig0023670:9774-9793 | Msa1410510:three_prime_UTR | 25.0% |
| !!! | TATTATTTGAAGAGTTTTGG+AGG | - | tig0023670:9828-9847 | Msa1410510:three_prime_UTR | 25.0% |
| ! | CATGGATAAATTTCAATCTA+AGG | + | tig0023670:9904-9923 | None:intergenic | 25.0% |
| !!! | AGAGATTCAATTTTGTTTCT+GGG | - | tig0023670:9988-10007 | Msa1410510:intron | 25.0% |
| !!! | TAATTGTTTGGTTAGTTTTC+GGG | - | tig0023670:10070-10089 | Msa1410510:intron | 25.0% |
| !!! | GCTGCTTTTATTTTATACTT+TGG | - | tig0023670:10335-10354 | Msa1410510:CDS | 25.0% |
| ! | AAGTTCACTTTAATGTGTAA+CGG | - | tig0023670:10425-10444 | Msa1410510:intron | 25.0% |
| !!! | TTTCTTTTTTGTGCTAAAGA+TGG | - | tig0023670:10517-10536 | Msa1410510:intron | 25.0% |
| ! | ATTTGTTTGTTTAGGTGTTT+AGG | - | tig0023670:10548-10567 | Msa1410510:intron | 25.0% |
| ! | TTGATTGGAAATGGAAATTA+TGG | - | tig0023670:10978-10997 | Msa1410510:intron | 25.0% |
| ! | TGATTGGAAATGGAAATTAT+GGG | - | tig0023670:10979-10998 | Msa1410510:intron | 25.0% |
| ! | TTAAGATAAACAGTATCCAA+CGG | - | tig0023670:11159-11178 | Msa1410510:intron | 25.0% |
| ! | GTACTTATATAATAGGAAAG+AGG | + | tig0023670:11221-11240 | None:intergenic | 25.0% |
| ! | TTTCCTATTATATAAGTACC+CGG | - | tig0023670:11222-11241 | Msa1410510:intron | 25.0% |
| ! | ATCTTAAATTTCATCAAACC+GGG | + | tig0023670:11243-11262 | None:intergenic | 25.0% |
| ! | CATCTTAAATTTCATCAAAC+CGG | + | tig0023670:11244-11263 | None:intergenic | 25.0% |
| ! | GATTATGAAAATTCCGATAT+TGG | + | tig0023670:11370-11389 | None:intergenic | 25.0% |
| ! | AAAAATGGGGATTAAAGAAA+TGG | - | tig0023670:11506-11525 | Msa1410510:CDS | 25.0% |
| ! | AAAATGGGGATTAAAGAAAT+GGG | - | tig0023670:11507-11526 | Msa1410510:CDS | 25.0% |
| !!! | TAATCCCTTATCTCATTTTT+GGG | - | tig0023670:11874-11893 | Msa1410510:five_prime_UTR | 25.0% |
| !!! | AAGTGTTTAGCTTTATCAAT+TGG | - | tig0023670:12199-12218 | Msa1410510:five_prime_UTR | 25.0% |
| ! | TTATGATATCATCAAACTGA+AGG | + | tig0023670:12228-12247 | None:intergenic | 25.0% |
| !! | TAACAGCATTTTACATTTTC+TGG | - | tig0023670:12245-12264 | Msa1410510:five_prime_UTR | 25.0% |
| !! | GGTACTACTTTTCTTTTCTA+AGG | + | tig0023670:9527-9546 | None:intergenic | 30.0% |
| ATATACCTTGGAACTTAGTT+TGG | - | tig0023670:9573-9592 | Msa1410510:three_prime_UTR | 30.0% | |
| AAAGGAAAAAACAGAGAAGA+GGG | + | tig0023670:9639-9658 | None:intergenic | 30.0% | |
| AAACATCAAAAACTCAACCT+AGG | + | tig0023670:9865-9884 | None:intergenic | 30.0% | |
| ! | TTTATCCATGAAGTATTAGC+TGG | - | tig0023670:9914-9933 | Msa1410510:CDS | 30.0% |
| !! | GAGAGATTCAATTTTGTTTC+TGG | - | tig0023670:9987-10006 | Msa1410510:intron | 30.0% |
| !!! | TCAATTTTGTTTCTGGGTTT+TGG | - | tig0023670:9994-10013 | Msa1410510:intron | 30.0% |
| ! | GCTTTTCTCACATAATTGTT+TGG | - | tig0023670:10058-10077 | Msa1410510:intron | 30.0% |
| !! | GTTTTGGTGATTTTTGTTGT+TGG | - | tig0023670:10092-10111 | Msa1410510:CDS | 30.0% |
| !!! | TGATTTTTGTTGTTGGAACT+TGG | - | tig0023670:10099-10118 | Msa1410510:CDS | 30.0% |
| GTTACACATTAAAGTGAACT+TGG | + | tig0023670:10426-10445 | None:intergenic | 30.0% | |
| TCTCGATGTTCATTTATTGA+TGG | - | tig0023670:10492-10511 | Msa1410510:intron | 30.0% | |
| ! | TAGCAGGAATTTGTTTGTTT+AGG | - | tig0023670:10540-10559 | Msa1410510:intron | 30.0% |
| TTCAACTTATAAGTAACGCA+AGG | + | tig0023670:10620-10639 | None:intergenic | 30.0% | |
| ATAACTCGACAAAAAACATC+AGG | - | tig0023670:10786-10805 | Msa1410510:intron | 30.0% | |
| ATTTATTTCCACCATTTGCT+TGG | - | tig0023670:10836-10855 | Msa1410510:intron | 30.0% | |
| TTTGAAAAGCAACAAAACAC+TGG | + | tig0023670:10869-10888 | None:intergenic | 30.0% | |
| TTTCCATTTCCAATCAACAA+GGG | + | tig0023670:10975-10994 | None:intergenic | 30.0% | |
| ATTTCCATTTCCAATCAACA+AGG | + | tig0023670:10976-10995 | None:intergenic | 30.0% | |
| AACTCATATCTGATTAAACC+AGG | + | tig0023670:11109-11128 | None:intergenic | 30.0% | |
| TATATAATAGGAAAGAGGGA+AGG | + | tig0023670:11216-11235 | None:intergenic | 30.0% | |
| AAACCGGGTACTTATATAAT+AGG | + | tig0023670:11228-11247 | None:intergenic | 30.0% | |
| AAATTTCGATATCGTCAAAC+AGG | + | tig0023670:11279-11298 | None:intergenic | 30.0% | |
| ACTTGACTTCATACCAATAT+CGG | - | tig0023670:11354-11373 | Msa1410510:intron | 30.0% | |
| TTTATACAAGTATCTTGGCT+TGG | - | tig0023670:11464-11483 | Msa1410510:CDS | 30.0% | |
| TTCGAAGGTTTGATGAAAAA+TGG | - | tig0023670:11491-11510 | Msa1410510:CDS | 30.0% | |
| TCGAAGGTTTGATGAAAAAT+GGG | - | tig0023670:11492-11511 | Msa1410510:CDS | 30.0% | |
| ! | GTTTGTTTCTTACAAGCAAA+AGG | + | tig0023670:11584-11603 | None:intergenic | 30.0% |
| ! | GTAATCCCTTATCTCATTTT+TGG | - | tig0023670:11873-11892 | Msa1410510:five_prime_UTR | 30.0% |
| GAATCCCAAAAATGAGATAA+GGG | + | tig0023670:11881-11900 | None:intergenic | 30.0% | |
| AGAATCCCAAAAATGAGATA+AGG | + | tig0023670:11882-11901 | None:intergenic | 30.0% | |
| !!! | TATCTCATTTTTGGGATTCT+TGG | - | tig0023670:11882-11901 | Msa1410510:five_prime_UTR | 30.0% |
| GTGAAAAAGCTTAATCTGTA+CGG | + | tig0023670:11929-11948 | None:intergenic | 30.0% | |
| AAGTTTCTAACATACACCAA+TGG | - | tig0023670:11983-12002 | Msa1410510:five_prime_UTR | 30.0% | |
| TCAACACTGATGTAATTGTA+AGG | + | tig0023670:12110-12129 | None:intergenic | 30.0% | |
| AAGTAGTACCGTAACTTAAC+AGG | - | tig0023670:9537-9556 | Msa1410510:three_prime_UTR | 35.0% | |
| CTCTCTGATATGATATACCT+TGG | - | tig0023670:9561-9580 | Msa1410510:three_prime_UTR | 35.0% | |
| GAAAGGAAAAAACAGAGAAG+AGG | + | tig0023670:9640-9659 | None:intergenic | 35.0% | |
| AAGCATTACTCGAAATTGGA+GGG | + | tig0023670:9739-9758 | None:intergenic | 35.0% | |
| ! | GATGAAGCATTACTCGAAAT+TGG | + | tig0023670:9743-9762 | None:intergenic | 35.0% |
| AGAATCCAGCTAATACTTCA+TGG | + | tig0023670:9922-9941 | None:intergenic | 35.0% | |
| ! | ATGAAGTATTAGCTGGATTC+TGG | - | tig0023670:9921-9940 | Msa1410510:CDS | 35.0% |
| TTAGCTGGATTCTGGATAAT+TGG | - | tig0023670:9929-9948 | Msa1410510:CDS | 35.0% | |
| TAGCTGGATTCTGGATAATT+GGG | - | tig0023670:9930-9949 | Msa1410510:CDS | 35.0% | |
| !!! | TTTGGTTAGTTTTCGGGTTT+TGG | - | tig0023670:10076-10095 | Msa1410510:intron | 35.0% |
| !!! | TTTTTGTTGTTGGAACTTGG+TGG | - | tig0023670:10102-10121 | Msa1410510:CDS | 35.0% |
| !!! | TTTTGTTGTTGGAACTTGGT+GGG | - | tig0023670:10103-10122 | Msa1410510:CDS | 35.0% |
| ! | AGATGCTCGAGAATTTTCTT+TGG | - | tig0023670:10303-10322 | Msa1410510:CDS | 35.0% |
| GCACAGGAGATATATGAAAT+TGG | + | tig0023670:10372-10391 | None:intergenic | 35.0% | |
| TTGTATTTATAAACGGCTGC+TGG | - | tig0023670:10458-10477 | Msa1410510:intron | 35.0% | |
| !! | AACAAGGGCATCAATCAATA+AGG | + | tig0023670:10960-10979 | None:intergenic | 35.0% |
| ATTCACTTCAAAACATCCGT+TGG | + | tig0023670:11178-11197 | None:intergenic | 35.0% | |
| !!! | ACGGATGTTTTGAAGTGAAT+CGG | - | tig0023670:11178-11197 | Msa1410510:intron | 35.0% |
| TATCTTGGGATGATAGGTAT+TGG | - | tig0023670:11421-11440 | Msa1410510:CDS | 35.0% | |
| CGAAGGTTTGATGAAAAATG+GGG | - | tig0023670:11493-11512 | Msa1410510:CDS | 35.0% | |
| TGTTTCTTACAAGCAAAAGG+AGG | + | tig0023670:11581-11600 | None:intergenic | 35.0% | |
| ! | TTTTGCTTACTCCCTATCTT+TGG | - | tig0023670:11653-11672 | Msa1410510:exon | 35.0% |
| ATCGTCAAGAAACTCCAAAT+TGG | + | tig0023670:11707-11726 | None:intergenic | 35.0% | |
| TTGTTGATACATACCAGAAG+AGG | + | tig0023670:11731-11750 | None:intergenic | 35.0% | |
| TGTAAACTGCACAACATAAG+AGG | + | tig0023670:11832-11851 | None:intergenic | 35.0% | |
| TGTGCAGTTTACACTATTCA+TGG | - | tig0023670:11839-11858 | Msa1410510:five_prime_UTR | 35.0% | |
| !!! | GCTTTTTCACAGTTTGATTG+AGG | - | tig0023670:11939-11958 | Msa1410510:five_prime_UTR | 35.0% |
| AACATACACCAATGGTTGAT+TGG | - | tig0023670:11991-12010 | Msa1410510:five_prime_UTR | 35.0% | |
| !! | TGATTGGTAGCTTTGTTATG+TGG | - | tig0023670:12007-12026 | Msa1410510:five_prime_UTR | 35.0% |
| CTTACTGTTAGTACCAGTTT+AGG | + | tig0023670:12069-12088 | None:intergenic | 35.0% | |
| ! | ATTACATCAGTGTTGAGTGA+TGG | - | tig0023670:12114-12133 | Msa1410510:five_prime_UTR | 35.0% |
| ! | GAGATATAGGACTTGTTTGT+TGG | - | tig0023670:12169-12188 | Msa1410510:five_prime_UTR | 35.0% |
| CAGAGAGACCTGTTAAGTTA+CGG | + | tig0023670:9548-9567 | None:intergenic | 40.0% | |
| GAGTACCAAACTAAGTTCCA+AGG | + | tig0023670:9581-9600 | None:intergenic | 40.0% | |
| ! | GAAGCATTACTCGAAATTGG+AGG | + | tig0023670:9740-9759 | None:intergenic | 40.0% |
| TGGAGGTTATGATGATTCCT+AGG | - | tig0023670:9845-9864 | Msa1410510:three_prime_UTR | 40.0% | |
| !!! | TTCTGGGTTTTGGAGATCAA+AGG | - | tig0023670:10004-10023 | Msa1410510:intron | 40.0% |
| ATCAGTTGCATTGCAATGTC+TGG | - | tig0023670:10137-10156 | Msa1410510:intron | 40.0% | |
| TCAGTTGCATTGCAATGTCT+GGG | - | tig0023670:10138-10157 | Msa1410510:intron | 40.0% | |
| ! | ATCTCGATCCATGTCCTTTT+AGG | + | tig0023670:10287-10306 | None:intergenic | 40.0% |
| ACCTTCTAATACGATCGTCA+TGG | + | tig0023670:10394-10413 | None:intergenic | 40.0% | |
| TTTGTGCTAAAGATGGTAGC+AGG | - | tig0023670:10524-10543 | Msa1410510:intron | 40.0% | |
| !! | CGTTGATAACTTGCAATGCT+GGG | + | tig0023670:10664-10683 | None:intergenic | 40.0% |
| !! | ACGTTGATAACTTGCAATGC+TGG | + | tig0023670:10665-10684 | None:intergenic | 40.0% |
| GCATTGCAAGTTATCAACGT+TGG | - | tig0023670:10665-10684 | Msa1410510:intron | 40.0% | |
| TTGCAAGTTATCAACGTTGG+CGG | - | tig0023670:10668-10687 | Msa1410510:intron | 40.0% | |
| CTCATCCTCTCCTTCATTAA+AGG | + | tig0023670:10816-10835 | None:intergenic | 40.0% | |
| GAATTTCTCCAAGCAAATGG+TGG | + | tig0023670:10847-10866 | None:intergenic | 40.0% | |
| CTGGAATTTCTCCAAGCAAA+TGG | + | tig0023670:10850-10869 | None:intergenic | 40.0% | |
| TGATTGATGCCCTTGTTGAT+TGG | - | tig0023670:10963-10982 | Msa1410510:intron | 40.0% | |
| ! | ATGCCCTTGTTGATTGGAAA+TGG | - | tig0023670:10969-10988 | Msa1410510:intron | 40.0% |
| CAAAACATGATGTCAGTTCC+TGG | - | tig0023670:11088-11107 | Msa1410510:intron | 40.0% | |
| CCTATCATCCCAAGATATAG+AGG | + | tig0023670:11418-11437 | None:intergenic | 40.0% | |
| CCTCTATATCTTGGGATGAT+AGG | - | tig0023670:11415-11434 | Msa1410510:CDS | 40.0% | |
| GATAGGGAGTAAGCAAAACA+GGG | + | tig0023670:11651-11670 | None:intergenic | 40.0% | |
| AGATAGGGAGTAAGCAAAAC+AGG | + | tig0023670:11652-11671 | None:intergenic | 40.0% | |
| ACCTAGAGATGCCAAAGATA+GGG | + | tig0023670:11667-11686 | None:intergenic | 40.0% | |
| AACCTAGAGATGCCAAAGAT+AGG | + | tig0023670:11668-11687 | None:intergenic | 40.0% | |
| TTTCTTGACGATTCCTCTTC+TGG | - | tig0023670:11715-11734 | Msa1410510:five_prime_UTR | 40.0% | |
| TACACTATTCATGGCATGCA+TGG | - | tig0023670:11848-11867 | Msa1410510:five_prime_UTR | 40.0% | |
| !!! | TCATTTTTGGGATTCTTGGC+CGG | - | tig0023670:11886-11905 | Msa1410510:five_prime_UTR | 40.0% |
| GTACGGAATTCATCATTCTG+AGG | + | tig0023670:11912-11931 | None:intergenic | 40.0% | |
| CAAAGCTACCAATCAACCAT+TGG | + | tig0023670:12002-12021 | None:intergenic | 40.0% | |
| CATGATGTGCTTTCCTAAAC+TGG | - | tig0023670:12053-12072 | Msa1410510:five_prime_UTR | 40.0% | |
| TGCTACAGGTAGAGAGATAT+AGG | - | tig0023670:12156-12175 | Msa1410510:five_prime_UTR | 40.0% | |
| CAGTTGCATTGCAATGTCTG+GGG | - | tig0023670:10139-10158 | Msa1410510:intron | 45.0% | |
| AGTTGCATTGCAATGTCTGG+GGG | - | tig0023670:10140-10159 | Msa1410510:intron | 45.0% | |
| ! | TGCTAGTAGTGGTGATGACT+TGG | - | tig0023670:10214-10233 | Msa1410510:intron | 45.0% |
| !! | CATGTCCTTTTAGGAGGACT+CGG | + | tig0023670:10278-10297 | None:intergenic | 45.0% |
| ! | TCGATCCATGTCCTTTTAGG+AGG | + | tig0023670:10284-10303 | None:intergenic | 45.0% |
| TAATACGATCGTCATGGCAC+AGG | + | tig0023670:10388-10407 | None:intergenic | 45.0% | |
| GCCATGACGATCGTATTAGA+AGG | - | tig0023670:10390-10409 | Msa1410510:CDS | 45.0% | |
| ATCAGGCCAGCCTTTAATGA+AGG | - | tig0023670:10803-10822 | Msa1410510:intron | 45.0% | |
| TCCTCTCCTTCATTAAAGGC+TGG | + | tig0023670:10812-10831 | None:intergenic | 45.0% | |
| TCGATATCGTCAAACAGGTG+CGG | + | tig0023670:11274-11293 | None:intergenic | 45.0% | |
| GGCAGTCTGCAATAGAACTA+AGG | + | tig0023670:11397-11416 | None:intergenic | 45.0% | |
| TGCAGACTGCCTCTATATCT+TGG | - | tig0023670:11406-11425 | Msa1410510:intron | 45.0% | |
| GCAGACTGCCTCTATATCTT+GGG | - | tig0023670:11407-11426 | Msa1410510:intron | 45.0% | |
| TCCCTATCTTTGGCATCTCT+AGG | - | tig0023670:11663-11682 | Msa1410510:exon | 45.0% | |
| CTAGGTTCACCTTTGCTTTG+TGG | - | tig0023670:11681-11700 | Msa1410510:five_prime_UTR | 45.0% | |
| CCAAATTGGCCACAAAGCAA+AGG | + | tig0023670:11693-11712 | None:intergenic | 45.0% | |
| CCTTTGCTTTGTGGCCAATT+TGG | - | tig0023670:11690-11709 | Msa1410510:five_prime_UTR | 45.0% | |
| ACTATTCATGGCATGCATGG+TGG | - | tig0023670:11851-11870 | Msa1410510:five_prime_UTR | 45.0% | |
| !! | GGAATTCATCATTCTGAGGC+CGG | + | tig0023670:11908-11927 | None:intergenic | 45.0% |
| GAAATTGGAGGGAACCCAGT+TGG | + | tig0023670:9728-9747 | None:intergenic | 50.0% | |
| ATTAAACCACCTGCCCCAAC+CGG | + | tig0023670:10170-10189 | None:intergenic | 50.0% | |
| TTGGGGCAGGTGGTTTAATG+AGG | - | tig0023670:10171-10190 | Msa1410510:intron | 50.0% | |
| AATGAGGCAGAGACATAGCC+AGG | - | tig0023670:10187-10206 | Msa1410510:intron | 50.0% | |
| ATGAGGCAGAGACATAGCCA+GGG | - | tig0023670:10188-10207 | Msa1410510:intron | 50.0% | |
| AGCCAGGGTTATGCTAGTAG+TGG | - | tig0023670:10203-10222 | Msa1410510:intron | 50.0% | |
| CACCACTACTAGCATAACCC+TGG | + | tig0023670:10208-10227 | None:intergenic | 50.0% | |
| TGGAAGACGATGCATGTTCG+AGG | - | tig0023670:10234-10253 | Msa1410510:CDS | 50.0% | |
| CGAGTCCTCCTAAAAGGACA+TGG | - | tig0023670:10276-10295 | Msa1410510:CDS | 50.0% | |
| AATGCTGGGAGCTTCACAGT+TGG | + | tig0023670:10650-10669 | None:intergenic | 50.0% | |
| GCCAGCCTTTAATGAAGGAG+AGG | - | tig0023670:10808-10827 | Msa1410510:intron | 50.0% | |
| GGTCATAAGACCAGACCATG+AGG | - | tig0023670:11000-11019 | Msa1410510:intron | 50.0% | |
| ATAAGACCAGACCATGAGGC+AGG | - | tig0023670:11004-11023 | Msa1410510:intron | 50.0% | |
| TAAGACCAGACCATGAGGCA+GGG | - | tig0023670:11005-11024 | Msa1410510:intron | 50.0% | |
| TTGCCATTCGCCACTGGATT+CGG | - | tig0023670:11550-11569 | Msa1410510:CDS | 50.0% | |
| ATTCCGAATCCAGTGGCGAA+TGG | + | tig0023670:11556-11575 | None:intergenic | 50.0% | |
| ! | AGTGTTGAGTGATGGTGACG+CGG | - | tig0023670:12122-12141 | Msa1410510:five_prime_UTR | 50.0% |
| CTTTGCCCCTTCCTCCAACT+GGG | - | tig0023670:9711-9730 | Msa1410510:three_prime_UTR | 55.0% | |
| AGGGAACCCAGTTGGAGGAA+GGG | + | tig0023670:9720-9739 | None:intergenic | 55.0% | |
| ATTGGAGGGAACCCAGTTGG+AGG | + | tig0023670:9725-9744 | None:intergenic | 55.0% | |
| TGCAATGTCTGGGGGAACAC+CGG | - | tig0023670:10148-10167 | Msa1410510:intron | 55.0% | |
| TGCCTCCGAGTCCTCCTAAA+AGG | - | tig0023670:10270-10289 | Msa1410510:CDS | 55.0% | |
| !! | GTCCTTTTAGGAGGACTCGG+AGG | + | tig0023670:10275-10294 | None:intergenic | 55.0% |
| !! | TCTTGGCTTGGAGCGTTCGA+AGG | - | tig0023670:11476-11495 | Msa1410510:CDS | 55.0% |
| ACAGTGTTGCCATTCGCCAC+TGG | - | tig0023670:11544-11563 | Msa1410510:CDS | 55.0% | |
| GGAGGTGATTCCGAATCCAG+TGG | + | tig0023670:11563-11582 | None:intergenic | 55.0% | |
| !! | CGGCTGGTCTTAGTTGCTAC+AGG | - | tig0023670:12142-12161 | Msa1410510:five_prime_UTR | 55.0% |
| CCAGTTGGAGGAAGGGGCAA+AGG | + | tig0023670:9713-9732 | None:intergenic | 60.0% | |
| CCTTTGCCCCTTCCTCCAAC+TGG | - | tig0023670:9710-9729 | Msa1410510:three_prime_UTR | 60.0% | |
| GGGAACCCAGTTGGAGGAAG+GGG | + | tig0023670:9719-9738 | None:intergenic | 60.0% | |
| GAGGGAACCCAGTTGGAGGA+AGG | + | tig0023670:9721-9740 | None:intergenic | 60.0% | |
| ATGTCTGGGGGAACACCGGT+TGG | - | tig0023670:10152-10171 | Msa1410510:intron | 60.0% | |
| ! | TGTCTGGGGGAACACCGGTT+GGG | - | tig0023670:10153-10172 | Msa1410510:intron | 60.0% |
| ! | TTGAGTGATGGTGACGCGGC+TGG | - | tig0023670:12126-12145 | Msa1410510:five_prime_UTR | 60.0% |
| ! | GTCTGGGGGAACACCGGTTG+GGG | - | tig0023670:10154-10173 | Msa1410510:intron | 65.0% |
| ACGTGCCCTGCCTCATGGTC+TGG | + | tig0023670:11013-11032 | None:intergenic | 65.0% | |
| TGCACACGTGCCCTGCCTCA+TGG | + | tig0023670:11018-11037 | None:intergenic | 65.0% | |
| ! | GGAACACCGGTTGGGGCAGG+TGG | - | tig0023670:10161-10180 | Msa1410510:intron | 70.0% |
| ! | GGGGGAACACCGGTTGGGGC+AGG | - | tig0023670:10158-10177 | Msa1410510:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023670 | gene | 9517 | 12306 | 9517 | ID=Msa1410510;Name=Msa1410510 |
| tig0023670 | mRNA | 9517 | 12306 | 9517 | ID=Msa1410510-mRNA-1;Parent=Msa1410510;Name=Msa1410510-mRNA-1;_AED=0.01;_eAED=0.01;_QI=635|1|1|1|1|1|4|368|194 |
| tig0023670 | exon | 9517 | 9977 | 9517 | ID=Msa1410510-mRNA-1:exon:26621;Parent=Msa1410510-mRNA-1 |
| tig0023670 | exon | 10087 | 10138 | 10087 | ID=Msa1410510-mRNA-1:exon:26620;Parent=Msa1410510-mRNA-1 |
| tig0023670 | exon | 10233 | 10412 | 10233 | ID=Msa1410510-mRNA-1:exon:26619;Parent=Msa1410510-mRNA-1 |
| tig0023670 | exon | 11412 | 12306 | 11412 | ID=Msa1410510-mRNA-1:exon:26618;Parent=Msa1410510-mRNA-1 |
| tig0023670 | five_prime_UTR | 11672 | 12306 | 11672 | ID=Msa1410510-mRNA-1:five_prime_utr;Parent=Msa1410510-mRNA-1 |
| tig0023670 | CDS | 11412 | 11671 | 11412 | ID=Msa1410510-mRNA-1:cds;Parent=Msa1410510-mRNA-1 |
| tig0023670 | CDS | 10233 | 10412 | 10233 | ID=Msa1410510-mRNA-1:cds;Parent=Msa1410510-mRNA-1 |
| tig0023670 | CDS | 10087 | 10138 | 10087 | ID=Msa1410510-mRNA-1:cds;Parent=Msa1410510-mRNA-1 |
| tig0023670 | CDS | 9885 | 9977 | 9885 | ID=Msa1410510-mRNA-1:cds;Parent=Msa1410510-mRNA-1 |
| tig0023670 | three_prime_UTR | 9517 | 9884 | 9517 | ID=Msa1410510-mRNA-1:three_prime_utr;Parent=Msa1410510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
