AlfalfaGEDB | Msa1078420

M. sativa cultivar zhongmu-4 / Msa1078420

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1078420	XP_003625536.2	92.763	152	11	0	18	169	12	163	5.02e-88	265

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1078420	sp\|F4J4N3\|DIR17_ARATH	51.754	114	44	2	15	126	8	112	2.54e-32	119

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1078420	G7L0N9	92.763	152	11	0	18	169	12	163	2.40e-88	265

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001450	Msa1078420	0.805494	1.299541e-49	-8.615850e-47
Msa0020390	Msa1078420	0.815760	7.839328e-52	-8.615850e-47
Msa0021210	Msa1078420	0.823630	1.248829e-53	-8.615850e-47
Msa0029630	Msa1078420	0.814557	1.449640e-51	-8.615850e-47
Msa0051630	Msa1078420	0.804871	1.754197e-49	-8.615850e-47
Msa0051740	Msa1078420	0.804577	2.020942e-49	-8.615850e-47
Msa0061080	Msa1078420	0.809905	1.502041e-50	-8.615850e-47
Msa0075500	Msa1078420	0.807817	4.200548e-50	-8.615850e-47
Msa0084080	Msa1078420	0.813920	2.004819e-51	-8.615850e-47
Msa0090360	Msa1078420	0.812717	3.684049e-51	-8.615850e-47
Msa0105520	Msa1078420	0.803904	2.790004e-49	-8.615850e-47
Msa0114430	Msa1078420	0.811748	5.993813e-51	-8.615850e-47
Msa0603570	Msa1078420	0.805193	1.502029e-49	-8.615850e-47
Msa0609410	Msa1078420	-0.803232	3.846690e-49	-8.615850e-47
Msa0613970	Msa1078420	0.828199	1.026819e-54	-8.615850e-47
Msa0615490	Msa1078420	0.819891	9.152815e-53	-8.615850e-47
Msa0640940	Msa1078420	0.810049	1.398097e-50	-8.615850e-47
Msa0642970	Msa1078420	0.839668	1.380791e-57	-8.615850e-47
Msa0644800	Msa1078420	0.803654	3.144067e-49	-8.615850e-47
Msa0662890	Msa1078420	0.802784	4.760202e-49	-8.615850e-47
Msa0679360	Msa1078420	0.813104	3.031072e-51	-8.615850e-47
Msa0680200	Msa1078420	0.800902	1.158888e-48	-8.615850e-47
Msa0682680	Msa1078420	0.834497	2.896895e-56	-8.615850e-47
Msa0698540	Msa1078420	0.832739	7.959680e-56	-8.615850e-47
Msa0711790	Msa1078420	0.808575	2.895629e-50	-8.615850e-47
Msa0722020	Msa1078420	0.815470	9.096468e-52	-8.615850e-47
Msa0752700	Msa1078420	0.841772	3.879617e-58	-8.615850e-47
Msa0763020	Msa1078420	0.803457	3.453922e-49	-8.615850e-47
Msa0763070	Msa1078420	0.800590	1.341981e-48	-8.615850e-47
Msa0794970	Msa1078420	0.840233	9.834021e-58	-8.615850e-47
Msa0800370	Msa1078420	0.830775	2.429139e-55	-8.615850e-47
Msa0808080	Msa1078420	0.812357	4.414805e-51	-8.615850e-47
Msa0818170	Msa1078420	0.802648	5.077523e-49	-8.615850e-47
Msa0826150	Msa1078420	0.805101	1.570791e-49	-8.615850e-47
Msa0831100	Msa1078420	0.843953	1.020573e-58	-8.615850e-47
Msa0125450	Msa1078420	0.806058	9.891519e-50	-8.615850e-47
Msa0137840	Msa1078420	0.803173	3.954739e-49	-8.615850e-47
Msa0138500	Msa1078420	0.802158	6.405641e-49	-8.615850e-47
Msa0138520	Msa1078420	0.800749	1.245650e-48	-8.615850e-47
Msa0146080	Msa1078420	0.803373	3.595658e-49	-8.615850e-47
Msa0171120	Msa1078420	0.813541	2.428929e-51	-8.615850e-47
Msa0180500	Msa1078420	0.808063	3.722785e-50	-8.615850e-47
Msa0183870	Msa1078420	0.802404	5.701832e-49	-8.615850e-47
Msa0184040	Msa1078420	0.814182	1.755349e-51	-8.615850e-47
Msa0189520	Msa1078420	0.810424	1.160654e-50	-8.615850e-47
Msa0199420	Msa1078420	0.812144	4.913665e-51	-8.615850e-47
Msa0202410	Msa1078420	0.816517	5.309636e-52	-8.615850e-47
Msa0204960	Msa1078420	0.804532	2.064957e-49	-8.615850e-47
Msa0206690	Msa1078420	0.810515	1.109380e-50	-8.615850e-47
Msa0209500	Msa1078420	0.831034	2.097751e-55	-8.615850e-47
Msa0212930	Msa1078420	0.823072	1.686031e-53	-8.615850e-47
Msa0223330	Msa1078420	0.819744	9.890122e-53	-8.615850e-47
Msa0223340	Msa1078420	0.807096	5.972661e-50	-8.615850e-47
Msa0228070	Msa1078420	0.817326	3.494762e-52	-8.615850e-47
Msa0231980	Msa1078420	0.803644	3.159217e-49	-8.615850e-47
Msa0233370	Msa1078420	0.802147	6.439086e-49	-8.615850e-47
Msa0233380	Msa1078420	0.802267	6.085085e-49	-8.615850e-47
Msa0237200	Msa1078420	0.804324	2.281596e-49	-8.615850e-47
Msa0237960	Msa1078420	0.807032	6.161290e-50	-8.615850e-47
Msa0365860	Msa1078420	0.807560	4.762497e-50	-8.615850e-47
Msa0380300	Msa1078420	0.807886	4.060561e-50	-8.615850e-47
Msa0382370	Msa1078420	0.833444	5.313997e-56	-8.615850e-47
Msa0388700	Msa1078420	0.806825	6.814954e-50	-8.615850e-47
Msa0408390	Msa1078420	0.818634	1.769282e-52	-8.615850e-47
Msa0423520	Msa1078420	0.801326	9.493217e-49	-8.615850e-47
Msa0432160	Msa1078420	0.809108	2.227235e-50	-8.615850e-47
Msa0434570	Msa1078420	0.800829	1.199331e-48	-8.615850e-47
Msa0453350	Msa1078420	0.804016	2.644106e-49	-8.615850e-47
Msa0473830	Msa1078420	-0.809853	1.540653e-50	-8.615850e-47
Msa0476680	Msa1078420	0.812525	4.056970e-51	-8.615850e-47
Msa0481970	Msa1078420	0.829248	5.724708e-55	-8.615850e-47
Msa0994370	Msa1078420	0.800495	1.403234e-48	-8.615850e-47
Msa0997970	Msa1078420	0.805084	1.583061e-49	-8.615850e-47
Msa1023920	Msa1078420	0.805694	1.179307e-49	-8.615850e-47
Msa1029070	Msa1078420	0.800631	1.316507e-48	-8.615850e-47
Msa1048160	Msa1078420	0.801313	9.552469e-49	-8.615850e-47
Msa1068870	Msa1078420	0.846982	1.542674e-59	-8.615850e-47
Msa1072900	Msa1078420	0.821514	3.878536e-53	-8.615850e-47
Msa1078420	Msa1080270	0.816563	5.184818e-52	-8.615850e-47
Msa1078420	Msa1087480	0.811855	5.680309e-51	-8.615850e-47
Msa1078420	Msa1089450	0.806675	7.330600e-50	-8.615850e-47
Msa1078420	Msa1091940	0.803278	3.761930e-49	-8.615850e-47
Msa1078420	Msa1107900	0.801045	1.083410e-48	-8.615850e-47
Msa1078420	Msa1123470	0.812188	4.807295e-51	-8.615850e-47
Msa1078420	Msa1126830	0.808384	3.179858e-50	-8.615850e-47
Msa1078420	Msa1128600	0.805713	1.168548e-49	-8.615850e-47
Msa1078420	Msa1137570	0.803268	3.779611e-49	-8.615850e-47
Msa1078420	Msa1156160	0.804814	1.802850e-49	-8.615850e-47
Msa1078420	Msa1165780	0.803926	2.760970e-49	-8.615850e-47
Msa1078420	Msa1165960	0.803526	3.343380e-49	-8.615850e-47
Msa1078420	Msa1168550	0.815833	7.550812e-52	-8.615850e-47
Msa1078420	Msa1168580	0.825894	3.654638e-54	-8.615850e-47
Msa1078420	Msa1168590	0.811783	5.890344e-51	-8.615850e-47
Msa1078420	Msa1169530	0.953450	2.668834e-111	-8.615850e-47
Msa1078420	Msa1169540	0.872690	2.619564e-67	-8.615850e-47
Msa1078420	Msa1169550	0.898018	7.996959e-77	-8.615850e-47
Msa1078420	Msa1211830	0.802608	5.175415e-49	-8.615850e-47
Msa1078420	Msa1212950	0.812917	3.331202e-51	-8.615850e-47
Msa1078420	Msa1231820	0.803525	3.343566e-49	-8.615850e-47
Msa1078420	Msa1254730	0.814754	1.311478e-51	-8.615850e-47
Msa1078420	Msa1270660	0.802899	4.506106e-49	-8.615850e-47
Msa1078420	Msa1296830	0.813178	2.919951e-51	-8.615850e-47
Msa1078420	Msa1298510	0.802777	4.775287e-49	-8.615850e-47
Msa1078420	Msa1303580	0.805399	1.359969e-49	-8.615850e-47
Msa1078420	Msa1305810	0.810262	1.258282e-50	-8.615850e-47
Msa1078420	Msa1313320	0.810855	9.363746e-51	-8.615850e-47
Msa1078420	Msa1332590	0.822763	1.989909e-53	-8.615850e-47
Msa1078420	Msa1335250	0.821993	3.004222e-53	-8.615850e-47
Msa1078420	Msa1336560	0.828520	8.588568e-55	-8.615850e-47
Msa1078420	Msa1342410	0.801065	1.073339e-48	-8.615850e-47
Msa1078420	Msa1342630	0.808438	3.096679e-50	-8.615850e-47
Msa1078420	Msa1351540	0.833237	5.986481e-56	-8.615850e-47
Msa1078420	Msa1357190	0.826717	2.326829e-54	-8.615850e-47
Msa1078420	Msa1366650	0.804795	1.819362e-49	-8.615850e-47
Msa1078420	Msa1367590	0.801048	1.081800e-48	-8.615850e-47
Msa1078420	Msa1369690	0.801915	7.188268e-49	-8.615850e-47
Msa1078420	Msa1376650	0.827979	1.159615e-54	-8.615850e-47
Msa1078420	Msa1381350	0.812414	4.291826e-51	-8.615850e-47
Msa1078420	Msa1389880	0.806516	7.920314e-50	-8.615850e-47
Msa1078420	Msa1390680	0.807022	6.192220e-50	-8.615850e-47
Msa1078420	Msa1390700	0.818565	1.834761e-52	-8.615850e-47
Msa1078420	Msa1392160	-0.803304	3.716838e-49	-8.615850e-47
Msa1078420	Msa1392890	0.806515	7.924828e-50	-8.615850e-47
Msa1078420	Msa1392910	0.818269	2.140378e-52	-8.615850e-47
Msa1078420	Msa1398090	0.800066	1.715321e-48	-8.615850e-47
Msa1078420	Msa1410510	0.805047	1.612009e-49	-8.615850e-47
Msa1078420	Msa1416260	0.807685	4.480150e-50	-8.615850e-47
Msa1078420	Msa1416370	0.825807	3.831914e-54	-8.615850e-47
Msa1078420	Msa1419870	0.813545	2.424564e-51	-8.615850e-47
Msa1078420	Msa1433390	0.813339	2.691522e-51	-8.615850e-47
Msa1078420	Msa1437270	0.810984	8.781027e-51	-8.615850e-47
Msa1078420	Msa1447890	0.808847	2.532130e-50	-8.615850e-47
Msa1078420	Msa1450720	0.840661	7.600717e-58	-8.615850e-47
Msa1078420	Msa1454680	0.821467	3.974843e-53	-8.615850e-47
Msa1078420	Msa1454960	0.804649	1.952435e-49	-8.615850e-47
Msa1078420	Msa1458810	0.805928	1.053513e-49	-8.615850e-47
Msa0245430	Msa1078420	0.803606	3.216957e-49	-8.615850e-47
Msa0245650	Msa1078420	0.820242	7.606453e-53	-8.615850e-47
Msa0249580	Msa1078420	0.823943	1.054958e-53	-8.615850e-47
Msa0253200	Msa1078420	0.818874	1.561081e-52	-8.615850e-47
Msa0257490	Msa1078420	0.830095	3.562077e-55	-8.615850e-47
Msa0259210	Msa1078420	0.813763	2.171417e-51	-8.615850e-47
Msa0259230	Msa1078420	0.801770	7.696192e-49	-8.615850e-47
Msa0261720	Msa1078420	0.808111	3.636715e-50	-8.615850e-47
Msa0274970	Msa1078420	0.807157	5.798626e-50	-8.615850e-47
Msa0275360	Msa1078420	0.808495	3.011630e-50	-8.615850e-47
Msa0276630	Msa1078420	0.809228	2.099437e-50	-8.615850e-47
Msa0281530	Msa1078420	0.826815	2.205544e-54	-8.615850e-47
Msa0292030	Msa1078420	0.818395	2.004219e-52	-8.615850e-47
Msa0296790	Msa1078420	0.803365	3.609774e-49	-8.615850e-47
Msa0296920	Msa1078420	0.813902	2.022903e-51	-8.615850e-47
Msa0309880	Msa1078420	0.803209	3.887361e-49	-8.615850e-47
Msa0310660	Msa1078420	0.802515	5.408756e-49	-8.615850e-47
Msa0311720	Msa1078420	0.800373	1.485793e-48	-8.615850e-47
Msa0315680	Msa1078420	0.802197	6.288608e-49	-8.615850e-47
Msa0315850	Msa1078420	0.810478	1.130167e-50	-8.615850e-47
Msa0317970	Msa1078420	0.814252	1.693304e-51	-8.615850e-47
Msa0320590	Msa1078420	0.830217	3.326117e-55	-8.615850e-47
Msa0322240	Msa1078420	0.808713	2.705573e-50	-8.615850e-47
Msa0326480	Msa1078420	0.808413	3.134785e-50	-8.615850e-47
Msa0330310	Msa1078420	0.835457	1.659258e-56	-8.615850e-47
Msa0336300	Msa1078420	0.806748	7.076337e-50	-8.615850e-47
Msa0336310	Msa1078420	0.805522	1.281955e-49	-8.615850e-47
Msa0336320	Msa1078420	0.833232	6.001138e-56	-8.615850e-47
Msa0343850	Msa1078420	0.813742	2.194225e-51	-8.615850e-47
Msa0357900	Msa1078420	0.804055	2.594970e-49	-8.615850e-47
Msa0491000	Msa1078420	0.806833	6.788400e-50	-8.615850e-47
Msa0510840	Msa1078420	0.812389	4.345353e-51	-8.615850e-47
Msa0518070	Msa1078420	-0.808998	2.351304e-50	-8.615850e-47
Msa0521010	Msa1078420	0.811016	8.643738e-51	-8.615850e-47
Msa0524500	Msa1078420	0.818656	1.748957e-52	-8.615850e-47
Msa0542290	Msa1078420	0.839561	1.472182e-57	-8.615850e-47
Msa0547160	Msa1078420	0.823275	1.512430e-53	-8.615850e-47
Msa0547990	Msa1078420	0.812718	3.681703e-51	-8.615850e-47
Msa0556060	Msa1078420	0.825917	3.608830e-54	-8.615850e-47
Msa0581110	Msa1078420	0.810037	1.406447e-50	-8.615850e-47
Msa0581130	Msa1078420	0.805543	1.268659e-49	-8.615850e-47
Msa0600450	Msa1078420	0.803332	3.666787e-49	-8.615850e-47
Msa0849030	Msa1078420	0.802264	6.092508e-49	-8.615850e-47
Msa0866410	Msa1078420	0.803689	3.092852e-49	-8.615850e-47
Msa0890550	Msa1078420	0.811327	7.401424e-51	-8.615850e-47
Msa0892640	Msa1078420	0.823675	1.218992e-53	-8.615850e-47
Msa0903780	Msa1078420	0.827987	1.154384e-54	-8.615850e-47
Msa0905750	Msa1078420	0.810772	9.762527e-51	-8.615850e-47
Msa0918390	Msa1078420	0.819152	1.349483e-52	-8.615850e-47
Msa0932570	Msa1078420	0.848130	7.457654e-60	-8.615850e-47
Msa0970530	Msa1078420	0.820347	7.198497e-53	-8.615850e-47
Msa0970600	Msa1078420	0.817106	3.915649e-52	-8.615850e-47
Msa0970990	Msa1078420	0.813642	2.308708e-51	-8.615850e-47
Msa0974950	Msa1078420	0.819881	9.201660e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1078420	MtrunA17_Chr7g0263291	92.763	152	11	0	18	169	12	163	4.61e-92	265
Msa1078420	MtrunA17_Chr7g0263301	60.248	161	61	2	9	169	2	159	5.24e-54	168
Msa1078420	MtrunA17_Chr7g0263311	49.057	53	26	1	71	122	8	60	2.58e-12	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1078420	AT3G58090.1	51.754	114	44	2	15	126	8	112	2.58e-33	119

Find 113 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAGATTTAATTGAAAATTT+AGG	0.081382	7_2:+77379402	Msa1078420:three_prime_UTR
TAATGACACATAACAATATT+TGG	0.095345	7_2:+77379660	Msa1078420:three_prime_UTR
ATAACAATATTTGGGTTATT+TGG	0.130012	7_2:+77379669	Msa1078420:three_prime_UTR
TTGCCTTCTGCTTGCGGTTT+TGG	0.187993	7_2:+77379899	Msa1078420:three_prime_UTR
CATCGAACCACATAGGAATT+TGG	0.220618	7_2:+77379049	Msa1078420:CDS
AAGATTTAATTGAAAATTTA+GGG	0.225449	7_2:+77379403	Msa1078420:three_prime_UTR
AAGAAATCTATTCCTAAATC+TGG	0.252000	7_2:+77379296	Msa1078420:CDS
GCACTACTCTTCCCAGATTT+AGG	0.253924	7_2:-77379308	None:intergenic
CTGCTACCGGATACTATTTC+AGG	0.274069	7_2:-77378987	None:intergenic
TTGTAACCGGGGAATTAAAT+TGG	0.300288	7_2:+77379635	Msa1078420:three_prime_UTR
GACTGTATGATTAGATAATT+TGG	0.306471	7_2:+77379839	Msa1078420:three_prime_UTR
TGGGAGAATGGTTTGTGGGG+AGG	0.323895	7_2:+77379075	Msa1078420:CDS
AGAGGGCAAAGAAGAAAATA+AGG	0.333305	7_2:+77378893	Msa1078420:CDS
GGGAGAATGGTTTGTGGGGA+GGG	0.334434	7_2:+77379076	Msa1078420:CDS
GATCAGCTGAATGAACAATT+AGG	0.336955	7_2:+77379479	Msa1078420:three_prime_UTR
GATTGATATTATGTTGTAAC+CGG	0.337748	7_2:+77379622	Msa1078420:three_prime_UTR
AGCAAAGCCGCACGCAAGCC+TGG	0.347113	7_2:-77380032	None:intergenic
GTGTACTGGTATGCTGTGTT+GGG	0.356040	7_2:+77379944	Msa1078420:three_prime_UTR
CTGTGTTGGGGTGTCTCTAC+TGG	0.364183	7_2:+77379957	Msa1078420:three_prime_UTR
ATCGAACCACATAGGAATTT+GGG	0.364456	7_2:+77379050	Msa1078420:CDS
GGCTTGGGAGAATGGTTTGT+GGG	0.370784	7_2:+77379071	Msa1078420:CDS
TGTTCGGTGGGAGGCTCTCC+AGG	0.371380	7_2:+77380014	Msa1078420:three_prime_UTR
ACCGAGTATGACAAAGAATC+TGG	0.379264	7_2:+77379143	Msa1078420:CDS
AATGACACATAACAATATTT+GGG	0.382379	7_2:+77379661	Msa1078420:three_prime_UTR
TGTGTACTGGTATGCTGTGT+TGG	0.382825	7_2:+77379943	Msa1078420:three_prime_UTR
TTCCTCCCTTTGCTGTGTAC+TGG	0.387091	7_2:+77379930	Msa1078420:three_prime_UTR
GGAATTTGGGCTTGGGAGAA+TGG	0.402637	7_2:+77379063	Msa1078420:CDS
GTATTTGTAGCAATAGCAAT+AGG	0.406270	7_2:+77379540	Msa1078420:three_prime_UTR
CTTTAGGTTTCTGTTTGAAA+TGG	0.408523	7_2:+77378869	Msa1078420:intron
TTGGTGACAGGTTGTGTAGC+AGG	0.410599	7_2:+77379858	Msa1078420:three_prime_UTR
TTCAAACCCACTCGTAAAAC+AGG	0.411499	7_2:-77379808	None:intergenic
ACCACATAGGAATTTGGGCT+TGG	0.411883	7_2:+77379055	Msa1078420:CDS
TGCGTGCGGCTTTGCTGTTT+AGG	0.415135	7_2:+77380039	Msa1078420:three_prime_UTR
GGGCTTGGGAGAATGGTTTG+TGG	0.416018	7_2:+77379070	Msa1078420:CDS
CATTGGCGCAGAGGGTTGTT+CGG	0.423791	7_2:+77379267	Msa1078420:CDS
TTGACTTGGAGATGGTTGTC+AGG	0.424578	7_2:+77379764	Msa1078420:three_prime_UTR
TTTGGGTTATTTGGAGAGCT+AGG	0.426784	7_2:+77379678	Msa1078420:three_prime_UTR
TGTAGCAGGGCTGTTGGTCT+CGG	0.435117	7_2:+77379872	Msa1078420:three_prime_UTR
ATCAAAACAAAGAGAACAAA+AGG	0.438164	7_2:+77379350	Msa1078420:CDS
GTGATTCTGAAGATCTTGAT+TGG	0.441563	7_2:+77379192	Msa1078420:CDS
GACGGCGCTGCTGCTGCTAC+CGG	0.450572	7_2:-77379000	None:intergenic
GTGCTGCAGTATACTGCTGC+AGG	0.451649	7_2:+77379987	Msa1078420:three_prime_UTR
TCTTGATTGGCCGGAGTTGA+AGG	0.457279	7_2:+77379205	Msa1078420:CDS
GAAGTTCTCAGTCCTTTAGA+TGG	0.458489	7_2:+77379227	Msa1078420:CDS
ATTACAATCGCAGGCTCTCC+AGG	0.465049	7_2:-77378954	None:intergenic
ATCTAATTCTTCTGCGGCAA+GGG	0.467917	7_2:+77378920	Msa1078420:CDS
TCAATGCGGTTGTGAAAAGA+TGG	0.472987	7_2:+77379714	Msa1078420:three_prime_UTR
CCCAGATTCTTTGTCATACT+CGG	0.473382	7_2:-77379144	None:intergenic
AGCATTGCTGCTGGAAGGGA+CGG	0.473470	7_2:-77379018	None:intergenic
TACTGCTGCAGGGTGCTGTT+CGG	0.473609	7_2:+77379998	Msa1078420:three_prime_UTR
GGCAGTTTGCCTTCTGCTTG+CGG	0.480160	7_2:+77379893	Msa1078420:three_prime_UTR
CTGCCAAAACCGCAAGCAGA+AGG	0.481308	7_2:-77379902	None:intergenic
TTCTGAAGATCTTGATTGGC+CGG	0.482353	7_2:+77379196	Msa1078420:CDS
GCTTGGGAGAATGGTTTGTG+GGG	0.486598	7_2:+77379072	Msa1078420:CDS
CCACATAGGAATTTGGGCTT+GGG	0.489077	7_2:+77379056	Msa1078420:CDS
AGTGAAATTCCACCATCTAA+AGG	0.490197	7_2:-77379239	None:intergenic
ATTATACCAATTTAATTCCC+CGG	0.493693	7_2:-77379641	None:intergenic
TGCTGCAGGGTGCTGTTCGG+TGG	0.502269	7_2:+77380001	Msa1078420:three_prime_UTR
TGATTAGATAATTTGGTGAC+AGG	0.511665	7_2:+77379846	Msa1078420:three_prime_UTR
AGAAATCTATTCCTAAATCT+GGG	0.513142	7_2:+77379297	Msa1078420:CDS
GCTGCAGGGTGCTGTTCGGT+GGG	0.514881	7_2:+77380002	Msa1078420:three_prime_UTR
GCATACCAGTACACAGCAAA+GGG	0.520968	7_2:-77379935	None:intergenic
GATACTCAAAGCATTGCTGC+TGG	0.527679	7_2:-77379027	None:intergenic
CTCAAAGCATTGCTGCTGGA+AGG	0.529613	7_2:-77379023	None:intergenic
GTTTATGGGACGTTATTACT+CGG	0.537141	7_2:+77379112	Msa1078420:CDS
ATAGGGACGATTTGTTCCCT+AGG	0.542347	7_2:+77379581	Msa1078420:three_prime_UTR
ACTCAAGACATTGGCGCAGA+GGG	0.544285	7_2:+77379259	Msa1078420:CDS
ACACAGCAAAGGGAGGAAGC+AGG	0.545915	7_2:-77379925	None:intergenic
ACGAGATCAAGGTGTTGACT+TGG	0.548103	7_2:+77379750	Msa1078420:three_prime_UTR
CAATAGCAATAGGATTATTG+TGG	0.548416	7_2:+77379550	Msa1078420:three_prime_UTR
CTGAGAACTTCCTTCAACTC+CGG	0.550027	7_2:-77379215	None:intergenic
GCAGGGTGCTGTTCGGTGGG+AGG	0.552219	7_2:+77380005	Msa1078420:three_prime_UTR
TGCGGCTTTGCTGTTTAGGA+AGG	0.553113	7_2:+77380043	Msa1078420:three_prime_UTR
TCAAAGCATTGCTGCTGGAA+GGG	0.554064	7_2:-77379022	None:intergenic
GTTTCTGTTTGAAATGGAAG+AGG	0.555062	7_2:+77378875	Msa1078420:CDS
TGGAATTTCACTCAAGACAT+TGG	0.557096	7_2:+77379250	Msa1078420:CDS
GAGCCTGCGATTGTAATTGA+CGG	0.559057	7_2:+77378960	Msa1078420:CDS
GATATGTCAATTATAAAGCA+AGG	0.561600	7_2:+77379437	Msa1078420:three_prime_UTR
TTTCTGTTTGAAATGGAAGA+GGG	0.564578	7_2:+77378876	Msa1078420:CDS
CCCAAGCCCAAATTCCTATG+TGG	0.565828	7_2:-77379056	None:intergenic
GGGCAAAGAAGAAAATAAGG+AGG	0.566148	7_2:+77378896	Msa1078420:CDS
CACCGTCTTCATACTCAACA+TGG	0.568627	7_2:-77379172	None:intergenic
CACTCAAGACATTGGCGCAG+AGG	0.573004	7_2:+77379258	Msa1078420:CDS
TTTATGGGACGTTATTACTC+GGG	0.573677	7_2:+77379113	Msa1078420:CDS
AGAGGTGGTAGACGAGATCA+AGG	0.580064	7_2:+77379739	Msa1078420:three_prime_UTR
GTTCTCAGTCCTTTAGATGG+TGG	0.581755	7_2:+77379230	Msa1078420:CDS
TGCTGCAGTATACTGCTGCA+GGG	0.582602	7_2:+77379988	Msa1078420:three_prime_UTR
GATCTAATTCTTCTGCGGCA+AGG	0.585721	7_2:+77378919	Msa1078420:CDS
AGCATACCAGTACACAGCAA+AGG	0.586490	7_2:-77379936	None:intergenic
GGAAATTTGTGCTGATGAGA+TGG	0.587712	7_2:+77379500	Msa1078420:three_prime_UTR
ACTCCGTCAATTACAATCGC+AGG	0.591670	7_2:-77378963	None:intergenic
GGAGTGCCTGAAATAGTATC+CGG	0.596939	7_2:+77378981	Msa1078420:CDS
CCGAGTATGACAAAGAATCT+GGG	0.597649	7_2:+77379144	Msa1078420:CDS
TGGTGACAGGTTGTGTAGCA+GGG	0.601386	7_2:+77379859	Msa1078420:three_prime_UTR
AGGTTGTGTAGCAGGGCTGT+TGG	0.610054	7_2:+77379866	Msa1078420:three_prime_UTR
CAATGCGGTTGTGAAAAGAT+GGG	0.615268	7_2:+77379715	Msa1078420:three_prime_UTR
TGAGTATCATCGAACCACAT+AGG	0.617574	7_2:+77379042	Msa1078420:CDS
TCAAGGTGTTGACTTGGAGA+TGG	0.617912	7_2:+77379756	Msa1078420:three_prime_UTR
ATTGATATTATGTTGTAACC+GGG	0.627535	7_2:+77379623	Msa1078420:three_prime_UTR
TGTACTGGTATGCTGTGTTG+GGG	0.627828	7_2:+77379945	Msa1078420:three_prime_UTR
GGCAAAGAAGAAAATAAGGA+GGG	0.632888	7_2:+77378897	Msa1078420:CDS
TGTGAAAAGATGGGAAGAGG+TGG	0.635735	7_2:+77379724	Msa1078420:three_prime_UTR
TGACTTGGAGATGGTTGTCA+GGG	0.640187	7_2:+77379765	Msa1078420:three_prime_UTR
GGTTGTGAAAAGATGGGAAG+AGG	0.645183	7_2:+77379721	Msa1078420:three_prime_UTR
ACCCACTCGTAAAACAGGCA+CGG	0.645325	7_2:-77379803	None:intergenic
AGGCTCTCCAGGCTTGCGTG+CGG	0.652658	7_2:+77380025	Msa1078420:three_prime_UTR
TACCAGTACACAGCAAAGGG+AGG	0.655145	7_2:-77379932	None:intergenic
GGAGGGATCTAATTCTTCTG+CGG	0.660755	7_2:+77378914	Msa1078420:CDS
TTGATATTATGTTGTAACCG+GGG	0.679324	7_2:+77379624	Msa1078420:three_prime_UTR
TACCATGTTGAGTATGAAGA+CGG	0.707224	7_2:+77379170	Msa1078420:CDS
TATCTAATCATACAGTCACG+TGG	0.710065	7_2:-77379833	None:intergenic
GAATGATAGCATCTTCAATG+CGG	0.737371	7_2:+77379700	Msa1078420:three_prime_UTR
AGTATGACAAAGAATCTGGG+TGG	0.768571	7_2:+77379147	Msa1078420:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATAAAAAAATTAAACATCA+AGG	-	chr7_2:77376541-77376560	None:intergenic	10.0%
!!	ATGTTTATGATATTAAAATA+TGG	+	chr7_2:77376575-77376594	Msa1078420:intron	10.0%
!!	TATAAAACTTCATAATTAAT+CGG	-	chr7_2:77376637-77376656	None:intergenic	10.0%
!!!	CAAATTTTTCTTAATTTTTT+AGG	-	chr7_2:77376762-77376781	None:intergenic	10.0%
!!	ATCTATAAAAATACATAAAA+AGG	-	chr7_2:77376893-77376912	None:intergenic	10.0%
!!	AAAATTTAAAAACAAAACAA+CGG	-	chr7_2:77376963-77376982	None:intergenic	10.0%
!!!	TAATAAATTTGTTCTTTTTT+TGG	-	chr7_2:77378315-77378334	None:intergenic	10.0%
!!	AAGATTTAATTGAAAATTTA+GGG	+	chr7_2:77379403-77379422	Msa1078420:three_prime_UTR	10.0%
!!!	TATAACATTTTATTGTCATT+TGG	+	chr7_2:77376265-77376284	Msa1078420:intron	15.0%
!!	TGTTTGTAATTGATATTTAA+AGG	+	chr7_2:77376440-77376459	Msa1078420:intron	15.0%
!!!	TTTTTTTATAATTTTTTCCG+AGG	+	chr7_2:77376551-77376570	Msa1078420:intron	15.0%
!!	TAATAAGAATATCAAATTAC+AGG	+	chr7_2:77377135-77377154	Msa1078420:intron	15.0%
!!	AATAAGAATATCAAATTACA+GGG	+	chr7_2:77377136-77377155	Msa1078420:intron	15.0%
!!!	TATGTGTTTTTTATTTTACA+TGG	+	chr7_2:77377165-77377184	Msa1078420:intron	15.0%
!!	AAATGACATATAATTTGAAA+CGG	-	chr7_2:77377264-77377283	None:intergenic	15.0%
!!	AAACAAAAATTAAAGAGAAT+TGG	-	chr7_2:77377888-77377907	None:intergenic	15.0%
!!	ACATAAATATCATTCATTAA+TGG	-	chr7_2:77377917-77377936	None:intergenic	15.0%
!!!	ACATTAACATCATTTTTTAA+TGG	+	chr7_2:77377995-77378014	Msa1078420:intron	15.0%
!!!	CATTAACATCATTTTTTAAT+GGG	+	chr7_2:77377996-77378015	Msa1078420:intron	15.0%
!!	ATGAGTTATGATAAATAAAT+TGG	-	chr7_2:77378094-77378113	None:intergenic	15.0%
!!!	AGTGACATATAATTTTTTTT+TGG	+	chr7_2:77378231-77378250	Msa1078420:intron	15.0%
!!	CAAATTTATTACAGTAATTA+AGG	+	chr7_2:77378324-77378343	Msa1078420:intron	15.0%
!!	AAAACTTAAAATATTGCTAT+AGG	+	chr7_2:77378788-77378807	Msa1078420:intron	15.0%
!!	GAAGATTTAATTGAAAATTT+AGG	+	chr7_2:77379402-77379421	Msa1078420:three_prime_UTR	15.0%
!!!	TTTTCTTAATTTTTTAGGCA+TGG	-	chr7_2:77376757-77376776	None:intergenic	20.0%
!!!	AAATTAAAATTTTACTGCCA+GGG	-	chr7_2:77377016-77377035	None:intergenic	20.0%
!!!	AAAATTAAAATTTTACTGCC+AGG	-	chr7_2:77377017-77377036	None:intergenic	20.0%
!!	ATATTTATGACGTTAACATA+TGG	-	chr7_2:77377051-77377070	None:intergenic	20.0%
!!	AATTGAACCTATAATATACA+CGG	-	chr7_2:77377206-77377225	None:intergenic	20.0%
!!	TGGAGTATATATAAATTAGA+GGG	-	chr7_2:77377240-77377259	None:intergenic	20.0%
!!	ATGGAGTATATATAAATTAG+AGG	-	chr7_2:77377241-77377260	None:intergenic	20.0%
!!!	TTTTTAATATTAAAAGCGTG+CGG	+	chr7_2:77377511-77377530	Msa1078420:intron	20.0%
!!	ATAATAAATAGTACATCATC+CGG	-	chr7_2:77377853-77377872	None:intergenic	20.0%
!!	TAATTAAATCAAGATATCTC+AGG	+	chr7_2:77378711-77378730	Msa1078420:intron	20.0%
!!	GATGTTCAAAAATTGTTTAT+GGG	+	chr7_2:77379098-77379117	Msa1078420:CDS	20.0%
!!	TAATGACACATAACAATATT+TGG	+	chr7_2:77379660-77379679	Msa1078420:three_prime_UTR	20.0%
!!	AATGACACATAACAATATTT+GGG	+	chr7_2:77379661-77379680	Msa1078420:three_prime_UTR	20.0%
!!!	ATAACAATATTTGGGTTATT+TGG	+	chr7_2:77379669-77379688	Msa1078420:three_prime_UTR	20.0%
!!!	TTTTTGCTGTTTGTAGTTTA+AGG	+	chr7_2:77376483-77376502	Msa1078420:intron	25.0%
!	TTAATATCATAAACATGCCT+CGG	-	chr7_2:77376571-77376590	None:intergenic	25.0%
!	TGTTCAAAAAAGCAACATAA+CGG	-	chr7_2:77377091-77377110	None:intergenic	25.0%
!	TCAAATTCCGTGTATATTAT+AGG	+	chr7_2:77377196-77377215	Msa1078420:intron	25.0%
!!	GTTATTGATAGTTGATTAGT+GGG	-	chr7_2:77377470-77377489	None:intergenic	25.0%
!!	AGTTATTGATAGTTGATTAG+TGG	-	chr7_2:77377471-77377490	None:intergenic	25.0%
!!!	TTTTAATATTAAAAGCGTGC+GGG	+	chr7_2:77377512-77377531	Msa1078420:intron	25.0%
!!	TATTATGTCATTTACACCAT+CGG	+	chr7_2:77377700-77377719	Msa1078420:intron	25.0%
!	CATTCATTAAATGATGTATG+TGG	-	chr7_2:77377796-77377815	None:intergenic	25.0%
!!	TTTTTGCATATAATAGTGAC+CGG	+	chr7_2:77377831-77377850	Msa1078420:intron	25.0%
!	GACATATAATTTGAAAGAGA+TGG	+	chr7_2:77378264-77378283	Msa1078420:intron	25.0%
!!	TAAGGAACAATTTTGAATTG+AGG	+	chr7_2:77378342-77378361	Msa1078420:intron	25.0%
!!	TTTTGAATTGAGGCTATAAA+TGG	+	chr7_2:77378352-77378371	Msa1078420:intron	25.0%
!!	ATGCAATATATATTTTGCTG+CGG	-	chr7_2:77378611-77378630	None:intergenic	25.0%
!!!	TTGTTTCTTGTTTTTGCTTT+AGG	+	chr7_2:77378853-77378872	Msa1078420:intron	25.0%
!	GGATGTTCAAAAATTGTTTA+TGG	+	chr7_2:77379097-77379116	Msa1078420:CDS	25.0%
!	AAGAAATCTATTCCTAAATC+TGG	+	chr7_2:77379296-77379315	Msa1078420:CDS	25.0%
!	AGAAATCTATTCCTAAATCT+GGG	+	chr7_2:77379297-77379316	Msa1078420:CDS	25.0%
!	ATCAAAACAAAGAGAACAAA+AGG	+	chr7_2:77379350-77379369	Msa1078420:CDS	25.0%
!	GATATGTCAATTATAAAGCA+AGG	+	chr7_2:77379437-77379456	Msa1078420:three_prime_UTR	25.0%
!!!	ATTATTGTGGTTTTGTAGAT+AGG	+	chr7_2:77379563-77379582	Msa1078420:three_prime_UTR	25.0%
!!!	TTATTGTGGTTTTGTAGATA+GGG	+	chr7_2:77379564-77379583	Msa1078420:three_prime_UTR	25.0%
!!	TATAGCAACAAATTTTCCTA+GGG	-	chr7_2:77379600-77379619	None:intergenic	25.0%
!	GATTGATATTATGTTGTAAC+CGG	+	chr7_2:77379622-77379641	Msa1078420:three_prime_UTR	25.0%
!	ATTGATATTATGTTGTAACC+GGG	+	chr7_2:77379623-77379642	Msa1078420:three_prime_UTR	25.0%
!	ATTATACCAATTTAATTCCC+CGG	-	chr7_2:77379644-77379663	None:intergenic	25.0%
!	GACTGTATGATTAGATAATT+TGG	+	chr7_2:77379839-77379858	Msa1078420:three_prime_UTR	25.0%
	TTAATCTCTTCTTCTTCTAG+TGG	+	chr7_2:77376377-77376396	Msa1078420:intron	30.0%
	TCAAAGTCTAAACAAACAAG+TGG	-	chr7_2:77376409-77376428	None:intergenic	30.0%
!!	ATTCGTAATTAATTTGTCCC+TGG	+	chr7_2:77376996-77377015	Msa1078420:intron	30.0%
!	GACATATAATTTGAAACGGA+TGG	-	chr7_2:77377260-77377279	None:intergenic	30.0%
	CCATTTAAGTACCCAAAAAT+GGG	-	chr7_2:77377345-77377364	None:intergenic	30.0%
!!!	CCATTTTTGGGTACTTAAAT+GGG	+	chr7_2:77377343-77377362	Msa1078420:intron	30.0%
	TCTCACACAAAGTTCTTAAA+TGG	+	chr7_2:77377442-77377461	Msa1078420:intron	30.0%
	CTCACACAAAGTTCTTAAAT+GGG	+	chr7_2:77377443-77377462	Msa1078420:intron	30.0%
!!!	ATTGGGGAATTTTTTTTTGG+GGG	-	chr7_2:77377586-77377605	None:intergenic	30.0%
!!!	CATTGGGGAATTTTTTTTTG+GGG	-	chr7_2:77377587-77377606	None:intergenic	30.0%
!!!	CCATTGGGGAATTTTTTTTT+GGG	-	chr7_2:77377588-77377607	None:intergenic	30.0%
	CCAAAAAAAAATTCCCCAAT+GGG	+	chr7_2:77377586-77377605	Msa1078420:intron	30.0%
	CAAAAAAAAATTCCCCAATG+GGG	+	chr7_2:77377587-77377606	Msa1078420:intron	30.0%
	AAAAAAAAATTCCCCAATGG+GGG	+	chr7_2:77377588-77377607	Msa1078420:intron	30.0%
	GATGGTGTAAATGACATAAT+AGG	-	chr7_2:77377701-77377720	None:intergenic	30.0%
	CGTTCATTAAATGATGTATG+TGG	+	chr7_2:77377757-77377776	Msa1078420:intron	30.0%
!	AAGCACTGTTAAATGGTTAT+CGG	-	chr7_2:77378506-77378525	None:intergenic	30.0%
!!	TTTCGAAAAGCACTGTTAAA+TGG	-	chr7_2:77378513-77378532	None:intergenic	30.0%
!	CTTTAGGTTTCTGTTTGAAA+TGG	+	chr7_2:77378869-77378888	Msa1078420:intron	30.0%
!	TTTCTGTTTGAAATGGAAGA+GGG	+	chr7_2:77378876-77378895	Msa1078420:CDS	30.0%
!!!	GTTCTCTTTGTTTTGATTTG+AGG	-	chr7_2:77379347-77379366	None:intergenic	30.0%
	GTATTTGTAGCAATAGCAAT+AGG	+	chr7_2:77379540-77379559	Msa1078420:three_prime_UTR	30.0%
	CAATAGCAATAGGATTATTG+TGG	+	chr7_2:77379550-77379569	Msa1078420:three_prime_UTR	30.0%
!	CTATAGCAACAAATTTTCCT+AGG	-	chr7_2:77379601-77379620	None:intergenic	30.0%
	TTGATATTATGTTGTAACCG+GGG	+	chr7_2:77379624-77379643	Msa1078420:three_prime_UTR	30.0%
!	TGATTAGATAATTTGGTGAC+AGG	+	chr7_2:77379846-77379865	Msa1078420:three_prime_UTR	30.0%
!!	ATATTTAAAGGCGTTGTCTG+AGG	+	chr7_2:77376452-77376471	Msa1078420:intron	35.0%
!!	TATTTAAAGGCGTTGTCTGA+GGG	+	chr7_2:77376453-77376472	Msa1078420:intron	35.0%
!!	TTGCTGTTTGTAGTTTAAGG+AGG	+	chr7_2:77376486-77376505	Msa1078420:intron	35.0%
	CATAATTAATCGGTCACTTG+TGG	-	chr7_2:77376627-77376646	None:intergenic	35.0%
!	GGTTGCAATTTTGCACATTT+TGG	+	chr7_2:77376812-77376831	Msa1078420:intron	35.0%
	TGAACATTGCATACGTTACA+AGG	+	chr7_2:77377105-77377124	Msa1078420:intron	35.0%
!!	TCACTTTAGAGCATCTACAA+TGG	+	chr7_2:77377314-77377333	Msa1078420:intron	35.0%
!!!	CCCATTTTTGGGTACTTAAA+TGG	+	chr7_2:77377342-77377361	Msa1078420:intron	35.0%
	CCCATTTAAGTACCCAAAAA+TGG	-	chr7_2:77377346-77377365	None:intergenic	35.0%
	AAGAACTTTGTGTGAGATCT+GGG	-	chr7_2:77377439-77377458	None:intergenic	35.0%
	TAAGAACTTTGTGTGAGATC+TGG	-	chr7_2:77377440-77377459	None:intergenic	35.0%
	TTAAGACCCCCAACTTTAAA+CGG	-	chr7_2:77377540-77377559	None:intergenic	35.0%
	CCCAAAAAAAAATTCCCCAA+TGG	+	chr7_2:77377585-77377604	Msa1078420:intron	35.0%
!!!	CCCATTGGGGAATTTTTTTT+TGG	-	chr7_2:77377589-77377608	None:intergenic	35.0%
	ATTAAGACACCGTACCTAAT+AGG	-	chr7_2:77377616-77377635	None:intergenic	35.0%
	ATTAGGTACGGTGTCTTAAT+TGG	+	chr7_2:77377616-77377635	Msa1078420:intron	35.0%
	TTGCTTATAATAGTGACCGA+TGG	-	chr7_2:77377719-77377738	None:intergenic	35.0%
!	TGACTCTGAAAACCCTAAAA+CGG	-	chr7_2:77378446-77378465	None:intergenic	35.0%
!!	CGAAATTCCCACATTTTGAT+AGG	+	chr7_2:77378528-77378547	Msa1078420:intron	35.0%
!	CGTTTTGCCTATCAAAATGT+GGG	-	chr7_2:77378538-77378557	None:intergenic	35.0%
!	TCGTTTTGCCTATCAAAATG+TGG	-	chr7_2:77378539-77378558	None:intergenic	35.0%
!	CAATATATATTTTGCTGCGG+CGG	-	chr7_2:77378608-77378627	None:intergenic	35.0%
!!	TTGCTATAGGCGTTGAATTT+AGG	+	chr7_2:77378801-77378820	Msa1078420:intron	35.0%
!	GTTTCTGTTTGAAATGGAAG+AGG	+	chr7_2:77378875-77378894	Msa1078420:CDS	35.0%
	AGAGGGCAAAGAAGAAAATA+AGG	+	chr7_2:77378893-77378912	Msa1078420:CDS	35.0%
	GGCAAAGAAGAAAATAAGGA+GGG	+	chr7_2:77378897-77378916	Msa1078420:CDS	35.0%
	ATCGAACCACATAGGAATTT+GGG	+	chr7_2:77379050-77379069	Msa1078420:CDS	35.0%
	GTTTATGGGACGTTATTACT+CGG	+	chr7_2:77379112-77379131	Msa1078420:CDS	35.0%
	TTTATGGGACGTTATTACTC+GGG	+	chr7_2:77379113-77379132	Msa1078420:CDS	35.0%
	TACCATGTTGAGTATGAAGA+CGG	+	chr7_2:77379170-77379189	Msa1078420:CDS	35.0%
!	GTGATTCTGAAGATCTTGAT+TGG	+	chr7_2:77379192-77379211	Msa1078420:CDS	35.0%
	AGTGAAATTCCACCATCTAA+AGG	-	chr7_2:77379242-77379261	None:intergenic	35.0%
	TGGAATTTCACTCAAGACAT+TGG	+	chr7_2:77379250-77379269	Msa1078420:CDS	35.0%
	GATCAGCTGAATGAACAATT+AGG	+	chr7_2:77379479-77379498	Msa1078420:three_prime_UTR	35.0%
	TTGTAACCGGGGAATTAAAT+TGG	+	chr7_2:77379635-77379654	Msa1078420:three_prime_UTR	35.0%
	GAATGATAGCATCTTCAATG+CGG	+	chr7_2:77379700-77379719	Msa1078420:three_prime_UTR	35.0%
	TATCTAATCATACAGTCACG+TGG	-	chr7_2:77379836-77379855	None:intergenic	35.0%
!!	TCATTTGGTTTGCTTGTGTG+TGG	+	chr7_2:77376280-77376299	Msa1078420:intron	40.0%
!!	ATTTAAAGGCGTTGTCTGAG+GGG	+	chr7_2:77376454-77376473	Msa1078420:intron	40.0%
	TCCGATTAAGCGTATACTCA+CGG	-	chr7_2:77376788-77376807	None:intergenic	40.0%
	GTATACGCTTAATCGGAACA+AGG	+	chr7_2:77376791-77376810	Msa1078420:intron	40.0%
!	ACAATGGAGACACCCATTTT+TGG	+	chr7_2:77377330-77377349	Msa1078420:intron	40.0%
!!	CAATGGAGACACCCATTTTT+GGG	+	chr7_2:77377331-77377350	Msa1078420:intron	40.0%
	AAAGAGTGATGTGTACGTGT+GGG	-	chr7_2:77377370-77377389	None:intergenic	40.0%
	AAAAGAGTGATGTGTACGTG+TGG	-	chr7_2:77377371-77377390	None:intergenic	40.0%
	TAAGACCCCCAACTTTAAAC+GGG	-	chr7_2:77377539-77377558	None:intergenic	40.0%
	ATTGGTAAAGACACCACCAT+TGG	+	chr7_2:77377634-77377653	Msa1078420:intron	40.0%
	TTGGTAAAGACACCACCATT+GGG	+	chr7_2:77377635-77377654	Msa1078420:intron	40.0%
!!	CTTTAACTTGTGCCCTTATG+CGG	-	chr7_2:77378037-77378056	None:intergenic	40.0%
	TGCATGTAGGACACATGTTA+AGG	-	chr7_2:77378170-77378189	None:intergenic	40.0%
!	CTATGCTAACTTGTGCATGT+AGG	-	chr7_2:77378183-77378202	None:intergenic	40.0%
	AAATGAACGATGCGTTTACC+CGG	+	chr7_2:77378387-77378406	Msa1078420:intron	40.0%
	GTTATCGGAAGCTATATCTC+CGG	-	chr7_2:77378491-77378510	None:intergenic	40.0%
!	TTTCCTCTCAAGCTTTGTCT+CGG	+	chr7_2:77378577-77378596	Msa1078420:intron	40.0%
	GGGCAAAGAAGAAAATAAGG+AGG	+	chr7_2:77378896-77378915	Msa1078420:CDS	40.0%
	ATCTAATTCTTCTGCGGCAA+GGG	+	chr7_2:77378920-77378939	Msa1078420:CDS	40.0%
!	GCAAGGGTTTATGATTTTCC+TGG	+	chr7_2:77378936-77378955	Msa1078420:CDS	40.0%
	TGAGTATCATCGAACCACAT+AGG	+	chr7_2:77379042-77379061	Msa1078420:CDS	40.0%
	CATCGAACCACATAGGAATT+TGG	+	chr7_2:77379049-77379068	Msa1078420:CDS	40.0%
	ACCGAGTATGACAAAGAATC+TGG	+	chr7_2:77379143-77379162	Msa1078420:CDS	40.0%
	CCCAGATTCTTTGTCATACT+CGG	-	chr7_2:77379147-77379166	None:intergenic	40.0%
	CCGAGTATGACAAAGAATCT+GGG	+	chr7_2:77379144-77379163	Msa1078420:CDS	40.0%
	AGTATGACAAAGAATCTGGG+TGG	+	chr7_2:77379147-77379166	Msa1078420:CDS	40.0%
!	TTCTGAAGATCTTGATTGGC+CGG	+	chr7_2:77379196-77379215	Msa1078420:CDS	40.0%
	GAAGTTCTCAGTCCTTTAGA+TGG	+	chr7_2:77379227-77379246	Msa1078420:CDS	40.0%
!	GGAAATTTGTGCTGATGAGA+TGG	+	chr7_2:77379500-77379519	Msa1078420:three_prime_UTR	40.0%
!	TTTGGGTTATTTGGAGAGCT+AGG	+	chr7_2:77379678-77379697	Msa1078420:three_prime_UTR	40.0%
	TCAATGCGGTTGTGAAAAGA+TGG	+	chr7_2:77379714-77379733	Msa1078420:three_prime_UTR	40.0%
	CAATGCGGTTGTGAAAAGAT+GGG	+	chr7_2:77379715-77379734	Msa1078420:three_prime_UTR	40.0%
	TTCAAACCCACTCGTAAAAC+AGG	-	chr7_2:77379811-77379830	None:intergenic	40.0%
!	GAAGGATGCTGCTGTATTTT+TGG	+	chr7_2:77380061-77380080	Msa1078420:three_prime_UTR	40.0%
!!!	ATGCTGCTGTATTTTTGGTG+TGG	+	chr7_2:77380066-77380085	Msa1078420:three_prime_UTR	40.0%
	CGATTAAGCGTATACTCACG+GGG	-	chr7_2:77376786-77376805	None:intergenic	45.0%
	CCGATTAAGCGTATACTCAC+GGG	-	chr7_2:77376787-77376806	None:intergenic	45.0%
	CCCGTGAGTATACGCTTAAT+CGG	+	chr7_2:77376784-77376803	Msa1078420:intron	45.0%
	ACTTTGTGTGAGATCTGGGT+TGG	-	chr7_2:77377435-77377454	None:intergenic	45.0%
	ACCTAATAGGTACCCCCATT+GGG	-	chr7_2:77377603-77377622	None:intergenic	45.0%
	TACCTAATAGGTACCCCCAT+TGG	-	chr7_2:77377604-77377623	None:intergenic	45.0%
!!	ATGGGGGTACCTATTAGGTA+CGG	+	chr7_2:77377604-77377623	Msa1078420:intron	45.0%
	TGGTAAAGACACCACCATTG+GGG	+	chr7_2:77377636-77377655	Msa1078420:intron	45.0%
!	CTCCTTCTACCACCGTTTTA+GGG	+	chr7_2:77378431-77378450	Msa1078420:intron	45.0%
	AACCCTAAAACGGTGGTAGA+AGG	-	chr7_2:77378436-77378455	None:intergenic	45.0%
!	CTCTGAAAACCCTAAAACGG+TGG	-	chr7_2:77378443-77378462	None:intergenic	45.0%
!	TTCCTCTCAAGCTTTGTCTC+GGG	+	chr7_2:77378578-77378597	Msa1078420:intron	45.0%
	GGAGGGATCTAATTCTTCTG+CGG	+	chr7_2:77378914-77378933	Msa1078420:CDS	45.0%
	GATCTAATTCTTCTGCGGCA+AGG	+	chr7_2:77378919-77378938	Msa1078420:CDS	45.0%
	GAGCCTGCGATTGTAATTGA+CGG	+	chr7_2:77378960-77378979	Msa1078420:CDS	45.0%
	ACTCCGTCAATTACAATCGC+AGG	-	chr7_2:77378966-77378985	None:intergenic	45.0%
!	GGAGTGCCTGAAATAGTATC+CGG	+	chr7_2:77378981-77379000	Msa1078420:CDS	45.0%
	CTGCTACCGGATACTATTTC+AGG	-	chr7_2:77378990-77379009	None:intergenic	45.0%
!!	TCAAAGCATTGCTGCTGGAA+GGG	-	chr7_2:77379025-77379044	None:intergenic	45.0%
!!	GATACTCAAAGCATTGCTGC+TGG	-	chr7_2:77379030-77379049	None:intergenic	45.0%
	ACCACATAGGAATTTGGGCT+TGG	+	chr7_2:77379055-77379074	Msa1078420:CDS	45.0%
	CCACATAGGAATTTGGGCTT+GGG	+	chr7_2:77379056-77379075	Msa1078420:CDS	45.0%
	CACCGTCTTCATACTCAACA+TGG	-	chr7_2:77379175-77379194	None:intergenic	45.0%
	CTGAGAACTTCCTTCAACTC+CGG	-	chr7_2:77379218-77379237	None:intergenic	45.0%
	GTTCTCAGTCCTTTAGATGG+TGG	+	chr7_2:77379230-77379249	Msa1078420:CDS	45.0%
	GCACTACTCTTCCCAGATTT+AGG	-	chr7_2:77379311-77379330	None:intergenic	45.0%
!	ATAGGGACGATTTGTTCCCT+AGG	+	chr7_2:77379581-77379600	Msa1078420:three_prime_UTR	45.0%
	GGTTGTGAAAAGATGGGAAG+AGG	+	chr7_2:77379721-77379740	Msa1078420:three_prime_UTR	45.0%
	TGTGAAAAGATGGGAAGAGG+TGG	+	chr7_2:77379724-77379743	Msa1078420:three_prime_UTR	45.0%
!!	ACGAGATCAAGGTGTTGACT+TGG	+	chr7_2:77379750-77379769	Msa1078420:three_prime_UTR	45.0%
!!	TCAAGGTGTTGACTTGGAGA+TGG	+	chr7_2:77379756-77379775	Msa1078420:three_prime_UTR	45.0%
!!	TTGACTTGGAGATGGTTGTC+AGG	+	chr7_2:77379764-77379783	Msa1078420:three_prime_UTR	45.0%
!	TGACTTGGAGATGGTTGTCA+GGG	+	chr7_2:77379765-77379784	Msa1078420:three_prime_UTR	45.0%
	GCATACCAGTACACAGCAAA+GGG	-	chr7_2:77379938-77379957	None:intergenic	45.0%
	AGCATACCAGTACACAGCAA+AGG	-	chr7_2:77379939-77379958	None:intergenic	45.0%
!	TGTGTACTGGTATGCTGTGT+TGG	+	chr7_2:77379943-77379962	Msa1078420:three_prime_UTR	45.0%
!	GTGTACTGGTATGCTGTGTT+GGG	+	chr7_2:77379944-77379963	Msa1078420:three_prime_UTR	45.0%
!	TGTACTGGTATGCTGTGTTG+GGG	+	chr7_2:77379945-77379964	Msa1078420:three_prime_UTR	45.0%
!!!	TATTTTTGGTGTGGTGCTGC+AGG	+	chr7_2:77380075-77380094	Msa1078420:three_prime_UTR	45.0%
!	TGTGTGAGATCTGGGTTGGA+GGG	-	chr7_2:77377431-77377450	None:intergenic	50.0%
!	TTGTGTGAGATCTGGGTTGG+AGG	-	chr7_2:77377432-77377451	None:intergenic	50.0%
!	TGCGGGTCCCGTTTAAAGTT+GGG	+	chr7_2:77377529-77377548	Msa1078420:intron	50.0%
	GGGGGTCTTAAATAAGACCC+CGG	+	chr7_2:77377549-77377568	Msa1078420:intron	50.0%
	GGGGTCTTAAATAAGACCCC+GGG	+	chr7_2:77377550-77377569	Msa1078420:intron	50.0%
	TTTGGGGGTCTCTTAAGACC+CGG	-	chr7_2:77377571-77377590	None:intergenic	50.0%
	CCTAATAGGTACCCCCATTG+GGG	-	chr7_2:77377602-77377621	None:intergenic	50.0%
	AAAGACACCACCATTGGGGA+TGG	+	chr7_2:77377640-77377659	Msa1078420:intron	50.0%
!	CACCATTGGGGATGGTCTTA+GGG	+	chr7_2:77377648-77377667	Msa1078420:intron	50.0%
	TACCCTAAGACCATCCCCAA+TGG	-	chr7_2:77377653-77377672	None:intergenic	50.0%
	ATGCTAACCTGTGCCGCATA+AGG	+	chr7_2:77378021-77378040	Msa1078420:intron	50.0%
	TGCTAACCTGTGCCGCATAA+GGG	+	chr7_2:77378022-77378041	Msa1078420:intron	50.0%
	CCTAAAACGGTGGTAGAAGG+AGG	-	chr7_2:77378433-77378452	None:intergenic	50.0%
!	CCTCCTTCTACCACCGTTTT+AGG	+	chr7_2:77378430-77378449	Msa1078420:intron	50.0%
	CGGTGAGCGAGAAGAAAGAA+GGG	-	chr7_2:77378471-77378490	None:intergenic	50.0%
	CCTTCTTTCTTCTCGCTCAC+CGG	+	chr7_2:77378469-77378488	Msa1078420:intron	50.0%
	TACCCGAGACAAAGCTTGAG+AGG	-	chr7_2:77378583-77378602	None:intergenic	50.0%
	ATTACAATCGCAGGCTCTCC+AGG	-	chr7_2:77378957-77378976	None:intergenic	50.0%
!!	CTCAAAGCATTGCTGCTGGA+AGG	-	chr7_2:77379026-77379045	None:intergenic	50.0%
	CCCAAGCCCAAATTCCTATG+TGG	-	chr7_2:77379059-77379078	None:intergenic	50.0%
	GGAATTTGGGCTTGGGAGAA+TGG	+	chr7_2:77379063-77379082	Msa1078420:CDS	50.0%
!	GGCTTGGGAGAATGGTTTGT+GGG	+	chr7_2:77379071-77379090	Msa1078420:CDS	50.0%
!	GCTTGGGAGAATGGTTTGTG+GGG	+	chr7_2:77379072-77379091	Msa1078420:CDS	50.0%
!	TCTTGATTGGCCGGAGTTGA+AGG	+	chr7_2:77379205-77379224	Msa1078420:CDS	50.0%
	ACTCAAGACATTGGCGCAGA+GGG	+	chr7_2:77379259-77379278	Msa1078420:CDS	50.0%
	AGAGGTGGTAGACGAGATCA+AGG	+	chr7_2:77379739-77379758	Msa1078420:three_prime_UTR	50.0%
	ACCCACTCGTAAAACAGGCA+CGG	-	chr7_2:77379806-77379825	None:intergenic	50.0%
!	TTGGTGACAGGTTGTGTAGC+AGG	+	chr7_2:77379858-77379877	Msa1078420:three_prime_UTR	50.0%
	TGGTGACAGGTTGTGTAGCA+GGG	+	chr7_2:77379859-77379878	Msa1078420:three_prime_UTR	50.0%
!	TTGCCTTCTGCTTGCGGTTT+TGG	+	chr7_2:77379899-77379918	Msa1078420:three_prime_UTR	50.0%
!	TTCCTCCCTTTGCTGTGTAC+TGG	+	chr7_2:77379930-77379949	Msa1078420:three_prime_UTR	50.0%
	TACCAGTACACAGCAAAGGG+AGG	-	chr7_2:77379935-77379954	None:intergenic	50.0%
	TGCTGCAGTATACTGCTGCA+GGG	+	chr7_2:77379988-77380007	Msa1078420:three_prime_UTR	50.0%
!!	TGCGGCTTTGCTGTTTAGGA+AGG	+	chr7_2:77380043-77380062	Msa1078420:three_prime_UTR	50.0%
!	GTGCGGGTCCCGTTTAAAGT+TGG	+	chr7_2:77377528-77377547	Msa1078420:intron	55.0%
!	GCGGGTCCCGTTTAAAGTTG+GGG	+	chr7_2:77377530-77377549	Msa1078420:intron	55.0%
!	CGGGTCCCGTTTAAAGTTGG+GGG	+	chr7_2:77377531-77377550	Msa1078420:intron	55.0%
	TTGGGGGTCTCTTAAGACCC+GGG	-	chr7_2:77377570-77377589	None:intergenic	55.0%
!!	CCCCAATGGGGGTACCTATT+AGG	+	chr7_2:77377599-77377618	Msa1078420:intron	55.0%
	CCTAAGACCATCCCCAATGG+TGG	-	chr7_2:77377650-77377669	None:intergenic	55.0%
	CCACCATTGGGGATGGTCTT+AGG	+	chr7_2:77377647-77377666	Msa1078420:intron	55.0%
	AACGATGCGTTTACCCGGAG+CGG	+	chr7_2:77378392-77378411	Msa1078420:intron	55.0%
	CCGGTGAGCGAGAAGAAAGA+AGG	-	chr7_2:77378472-77378491	None:intergenic	55.0%
	AGCATTGCTGCTGGAAGGGA+CGG	-	chr7_2:77379021-77379040	None:intergenic	55.0%
	GGGCTTGGGAGAATGGTTTG+TGG	+	chr7_2:77379070-77379089	Msa1078420:CDS	55.0%
!	TGGGAGAATGGTTTGTGGGG+AGG	+	chr7_2:77379075-77379094	Msa1078420:CDS	55.0%
!	GGGAGAATGGTTTGTGGGGA+GGG	+	chr7_2:77379076-77379095	Msa1078420:CDS	55.0%
	CACTCAAGACATTGGCGCAG+AGG	+	chr7_2:77379258-77379277	Msa1078420:CDS	55.0%
	CATTGGCGCAGAGGGTTGTT+CGG	+	chr7_2:77379267-77379286	Msa1078420:CDS	55.0%
!	GCCGTGCCTGTTTTACGAGT+GGG	+	chr7_2:77379802-77379821	Msa1078420:three_prime_UTR	55.0%
	AGGTTGTGTAGCAGGGCTGT+TGG	+	chr7_2:77379866-77379885	Msa1078420:three_prime_UTR	55.0%
!	TGTAGCAGGGCTGTTGGTCT+CGG	+	chr7_2:77379872-77379891	Msa1078420:three_prime_UTR	55.0%
	GGCAGTTTGCCTTCTGCTTG+CGG	+	chr7_2:77379893-77379912	Msa1078420:three_prime_UTR	55.0%
	CTGCCAAAACCGCAAGCAGA+AGG	-	chr7_2:77379905-77379924	None:intergenic	55.0%
	ACACAGCAAAGGGAGGAAGC+AGG	-	chr7_2:77379928-77379947	None:intergenic	55.0%
!	CTGTGTTGGGGTGTCTCTAC+TGG	+	chr7_2:77379957-77379976	Msa1078420:three_prime_UTR	55.0%
	GTGCTGCAGTATACTGCTGC+AGG	+	chr7_2:77379987-77380006	Msa1078420:three_prime_UTR	55.0%
!!	TACTGCTGCAGGGTGCTGTT+CGG	+	chr7_2:77379998-77380017	Msa1078420:three_prime_UTR	55.0%
!!	TGCGTGCGGCTTTGCTGTTT+AGG	+	chr7_2:77380039-77380058	Msa1078420:three_prime_UTR	55.0%
	TGGGGGTCTCTTAAGACCCG+GGG	-	chr7_2:77377569-77377588	None:intergenic	60.0%
	CTTGTGCCCTTATGCGGCAC+AGG	-	chr7_2:77378031-77378050	None:intergenic	60.0%
	ACGATGCGTTTACCCGGAGC+GGG	+	chr7_2:77378393-77378412	Msa1078420:intron	60.0%
!	CGCCGTGCCTGTTTTACGAG+TGG	+	chr7_2:77379801-77379820	Msa1078420:three_prime_UTR	60.0%
	ACGATGACAGAGCCCGCTCC+GGG	-	chr7_2:77378408-77378427	None:intergenic	65.0%
	GACGATGACAGAGCCCGCTC+CGG	-	chr7_2:77378409-77378428	None:intergenic	65.0%
!!	TGCTGCAGGGTGCTGTTCGG+TGG	+	chr7_2:77380001-77380020	Msa1078420:three_prime_UTR	65.0%
!!	GCTGCAGGGTGCTGTTCGGT+GGG	+	chr7_2:77380002-77380021	Msa1078420:three_prime_UTR	65.0%
!	TGTTCGGTGGGAGGCTCTCC+AGG	+	chr7_2:77380014-77380033	Msa1078420:three_prime_UTR	65.0%
	AGGCTCTCCAGGCTTGCGTG+CGG	+	chr7_2:77380025-77380044	Msa1078420:three_prime_UTR	65.0%
	AGCAAAGCCGCACGCAAGCC+TGG	-	chr7_2:77380035-77380054	None:intergenic	65.0%
	GACGGCGCTGCTGCTGCTAC+CGG	-	chr7_2:77379003-77379022	None:intergenic	70.0%
!!	GCAGGGTGCTGTTCGGTGGG+AGG	+	chr7_2:77380005-77380024	Msa1078420:three_prime_UTR	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_2	gene	77376245	77380129	77376245	ID=Msa1078420;Name=Msa1078420
chr7_2	mRNA	77376245	77380129	77376245	ID=Msa1078420-mRNA-1;Parent=Msa1078420;Name=Msa1078420-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0\|0\|0.5\|0.5\|0\|1\|2\|750\|169
chr7_2	exon	77376245	77376249	77376245	ID=Msa1078420-mRNA-1:exon:18933;Parent=Msa1078420-mRNA-1
chr7_2	exon	77378875	77380129	77378875	ID=Msa1078420-mRNA-1:exon:18934;Parent=Msa1078420-mRNA-1
chr7_2	CDS	77376245	77376249	77376245	ID=Msa1078420-mRNA-1:cds;Parent=Msa1078420-mRNA-1
chr7_2	CDS	77378875	77379379	77378875	ID=Msa1078420-mRNA-1:cds;Parent=Msa1078420-mRNA-1
chr7_2	three_prime_UTR	77379380	77380129	77379380	ID=Msa1078420-mRNA-1:three_prime_utr;Parent=Msa1078420-mRNA-1

Gene Sequence

>Msa1078420

ATGGGGTTTCTGTTTGAAATGGAAGAGGGCAAAGAAGAAAATAAGGAGGGATCTAATTCTTCTGCGGCAAGGGTTTATGATTTTCCTGGAGAGCCTGCGATTGTAATTGACGGAGTGCCTGAAATAGTATCCGGTAGCAGCAGCAGCGCCGTCCCTTCCAGCAGCAATGCTTTGAGTATCATCGAACCACATAGGAATTTGGGCTTGGGAGAATGGTTTGTGGGGAGGGATGTTCAAAAATTGTTTATGGGACGTTATTACTCGGGTAGAGTCACCGAGTATGACAAAGAATCTGGGTGGTACCATGTTGAGTATGAAGACGGTGATTCTGAAGATCTTGATTGGCCGGAGTTGAAGGAAGTTCTCAGTCCTTTAGATGGTGGAATTTCACTCAAGACATTGGCGCAGAGGGTTGTTCGGAATAGTAAGAAATCTATTCCTAAATCTGGGAAGAGTAGTGCTCGTTCGCAAAATCCTCAAATCAAAACAAAGAGAACAAAAGGAAATTAG

Protein sequence

>Msa1078420

MGFLFEMEEGKEENKEGSNSSAARVYDFPGEPAIVIDGVPEIVSGSSSSAVPSSSNALSIIEPHRNLGLGEWFVGRDVQKLFMGRYYSGRVTEYDKESGWYHVEYEDGDSEDLDWPELKEVLSPLDGGISLKTLAQRVVRNSKKSIPKSGKSSARSQNPQIKTKRTKGN*