Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169530 | XP_003625536.2 | 92.763 | 152 | 11 | 0 | 18 | 169 | 12 | 163 | 5.02e-88 | 265 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169530 | sp|F4J4N3|DIR17_ARATH | 51.754 | 114 | 44 | 2 | 15 | 126 | 8 | 112 | 2.54e-32 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169530 | G7L0N9 | 92.763 | 152 | 11 | 0 | 18 | 169 | 12 | 163 | 2.40e-88 | 265 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa1169530 | 0.817563 | 3.089796e-52 | -8.615850e-47 |
| Msa0021210 | Msa1169530 | 0.811020 | 8.628269e-51 | -8.615850e-47 |
| Msa0024210 | Msa1169530 | -0.800820 | 1.204512e-48 | -8.615850e-47 |
| Msa0027770 | Msa1169530 | 0.806442 | 8.211169e-50 | -8.615850e-47 |
| Msa0029630 | Msa1169530 | 0.819198 | 1.317332e-52 | -8.615850e-47 |
| Msa0051630 | Msa1169530 | 0.813631 | 2.321181e-51 | -8.615850e-47 |
| Msa0051740 | Msa1169530 | 0.811207 | 7.859071e-51 | -8.615850e-47 |
| Msa0051750 | Msa1169530 | 0.814527 | 1.472156e-51 | -8.615850e-47 |
| Msa0061080 | Msa1169530 | 0.810235 | 1.275200e-50 | -8.615850e-47 |
| Msa0075500 | Msa1169530 | 0.810770 | 9.768855e-51 | -8.615850e-47 |
| Msa0079920 | Msa1169530 | 0.802019 | 6.843538e-49 | -8.615850e-47 |
| Msa0083280 | Msa1169530 | 0.800263 | 1.564714e-48 | -8.615850e-47 |
| Msa0084080 | Msa1169530 | 0.820545 | 6.480868e-53 | -8.615850e-47 |
| Msa0090360 | Msa1169530 | 0.829430 | 5.170048e-55 | -8.615850e-47 |
| Msa0091610 | Msa1169530 | 0.804381 | 2.220229e-49 | -8.615850e-47 |
| Msa0105520 | Msa1169530 | 0.815639 | 8.341233e-52 | -8.615850e-47 |
| Msa0114430 | Msa1169530 | 0.805505 | 1.292655e-49 | -8.615850e-47 |
| Msa0603570 | Msa1169530 | 0.806881 | 6.631607e-50 | -8.615850e-47 |
| Msa0609410 | Msa1169530 | -0.821540 | 3.824160e-53 | -8.615850e-47 |
| Msa0613970 | Msa1169530 | 0.820576 | 6.375850e-53 | -8.615850e-47 |
| Msa0615490 | Msa1169530 | 0.815915 | 7.237222e-52 | -8.615850e-47 |
| Msa0642970 | Msa1169530 | 0.832771 | 7.815417e-56 | -8.615850e-47 |
| Msa0644030 | Msa1169530 | 0.804099 | 2.541472e-49 | -8.615850e-47 |
| Msa0644800 | Msa1169530 | 0.809624 | 1.726032e-50 | -8.615850e-47 |
| Msa0679360 | Msa1169530 | 0.801188 | 1.013065e-48 | -8.615850e-47 |
| Msa0682680 | Msa1169530 | 0.828921 | 6.871355e-55 | -8.615850e-47 |
| Msa0692840 | Msa1169530 | 0.802262 | 6.097476e-49 | -8.615850e-47 |
| Msa0695130 | Msa1169530 | 0.805812 | 1.114304e-49 | -8.615850e-47 |
| Msa0698540 | Msa1169530 | 0.834805 | 2.423739e-56 | -8.615850e-47 |
| Msa0709160 | Msa1169530 | 0.805679 | 1.188100e-49 | -8.615850e-47 |
| Msa0711790 | Msa1169530 | 0.808054 | 3.738427e-50 | -8.615850e-47 |
| Msa0721280 | Msa1169530 | 0.810635 | 1.044961e-50 | -8.615850e-47 |
| Msa0722020 | Msa1169530 | 0.831241 | 1.866755e-55 | -8.615850e-47 |
| Msa0740510 | Msa1169530 | 0.803459 | 3.450617e-49 | -8.615850e-47 |
| Msa0752700 | Msa1169530 | 0.833912 | 4.059190e-56 | -8.615850e-47 |
| Msa0762970 | Msa1169530 | 0.800969 | 1.122948e-48 | -8.615850e-47 |
| Msa0763020 | Msa1169530 | 0.815645 | 8.314237e-52 | -8.615850e-47 |
| Msa0763070 | Msa1169530 | 0.813976 | 1.948200e-51 | -8.615850e-47 |
| Msa0784380 | Msa1169530 | 0.800719 | 1.263373e-48 | -8.615850e-47 |
| Msa0794970 | Msa1169530 | 0.834419 | 3.029703e-56 | -8.615850e-47 |
| Msa0800370 | Msa1169530 | 0.822697 | 2.062430e-53 | -8.615850e-47 |
| Msa0808080 | Msa1169530 | 0.812270 | 4.612266e-51 | -8.615850e-47 |
| Msa0826500 | Msa1169530 | 0.808182 | 3.511882e-50 | -8.615850e-47 |
| Msa0831100 | Msa1169530 | 0.837598 | 4.728303e-57 | -8.615850e-47 |
| Msa0125450 | Msa1169530 | 0.814681 | 1.360871e-51 | -8.615850e-47 |
| Msa0125540 | Msa1169530 | 0.800441 | 1.439281e-48 | -8.615850e-47 |
| Msa0137840 | Msa1169530 | 0.818463 | 1.934277e-52 | -8.615850e-47 |
| Msa0138500 | Msa1169530 | 0.805908 | 1.063556e-49 | -8.615850e-47 |
| Msa0138520 | Msa1169530 | 0.802174 | 6.357804e-49 | -8.615850e-47 |
| Msa0145580 | Msa1169530 | 0.806441 | 8.212930e-50 | -8.615850e-47 |
| Msa0171120 | Msa1169530 | 0.815822 | 7.593416e-52 | -8.615850e-47 |
| Msa0180500 | Msa1169530 | 0.800041 | 1.736052e-48 | -8.615850e-47 |
| Msa0184040 | Msa1169530 | 0.828980 | 6.647443e-55 | -8.615850e-47 |
| Msa0189520 | Msa1169530 | 0.804478 | 2.118666e-49 | -8.615850e-47 |
| Msa0202410 | Msa1169530 | 0.801178 | 1.017902e-48 | -8.615850e-47 |
| Msa0209500 | Msa1169530 | 0.821739 | 3.440825e-53 | -8.615850e-47 |
| Msa0212930 | Msa1169530 | 0.820119 | 8.115234e-53 | -8.615850e-47 |
| Msa0220440 | Msa1169530 | 0.818536 | 1.862369e-52 | -8.615850e-47 |
| Msa0223330 | Msa1169530 | 0.811892 | 5.577951e-51 | -8.615850e-47 |
| Msa0228070 | Msa1169530 | 0.826723 | 2.319221e-54 | -8.615850e-47 |
| Msa0231980 | Msa1169530 | 0.809338 | 1.987594e-50 | -8.615850e-47 |
| Msa0237960 | Msa1169530 | 0.811747 | 5.998279e-51 | -8.615850e-47 |
| Msa0376310 | Msa1169530 | 0.800906 | 1.156802e-48 | -8.615850e-47 |
| Msa0380300 | Msa1169530 | 0.830644 | 2.615355e-55 | -8.615850e-47 |
| Msa0382370 | Msa1169530 | 0.811788 | 5.875443e-51 | -8.615850e-47 |
| Msa0388700 | Msa1169530 | 0.812609 | 3.889952e-51 | -8.615850e-47 |
| Msa0408390 | Msa1169530 | 0.819398 | 1.186307e-52 | -8.615850e-47 |
| Msa0419720 | Msa1169530 | 0.802789 | 4.747719e-49 | -8.615850e-47 |
| Msa0423520 | Msa1169530 | 0.805037 | 1.619265e-49 | -8.615850e-47 |
| Msa0443430 | Msa1169530 | 0.801639 | 8.188371e-49 | -8.615850e-47 |
| Msa0453350 | Msa1169530 | 0.815474 | 9.075555e-52 | -8.615850e-47 |
| Msa0473830 | Msa1169530 | -0.806259 | 8.971490e-50 | -8.615850e-47 |
| Msa0481970 | Msa1169530 | 0.810236 | 1.274340e-50 | -8.615850e-47 |
| Msa0997970 | Msa1169530 | 0.811275 | 7.593627e-51 | -8.615850e-47 |
| Msa1009750 | Msa1169530 | 0.801355 | 9.361816e-49 | -8.615850e-47 |
| Msa1023920 | Msa1169530 | 0.811060 | 8.455891e-51 | -8.615850e-47 |
| Msa1024750 | Msa1169530 | 0.812242 | 4.678667e-51 | -8.615850e-47 |
| Msa1048160 | Msa1169530 | 0.809010 | 2.337535e-50 | -8.615850e-47 |
| Msa1068870 | Msa1169530 | 0.823272 | 1.514628e-53 | -8.615850e-47 |
| Msa1072900 | Msa1169530 | 0.801075 | 1.068182e-48 | -8.615850e-47 |
| Msa1078170 | Msa1169530 | 0.801099 | 1.056489e-48 | -8.615850e-47 |
| Msa1078420 | Msa1169530 | 0.953450 | 2.668834e-111 | -8.615850e-47 |
| Msa1080270 | Msa1169530 | 0.809295 | 2.030250e-50 | -8.615850e-47 |
| Msa1087480 | Msa1169530 | 0.818616 | 1.785831e-52 | -8.615850e-47 |
| Msa1091940 | Msa1169530 | 0.809955 | 1.464794e-50 | -8.615850e-47 |
| Msa1093840 | Msa1169530 | 0.804128 | 2.506321e-49 | -8.615850e-47 |
| Msa0245650 | Msa1169530 | 0.815734 | 7.943977e-52 | -8.615850e-47 |
| Msa0249580 | Msa1169530 | 0.824000 | 1.023214e-53 | -8.615850e-47 |
| Msa0253200 | Msa1169530 | 0.810731 | 9.961116e-51 | -8.615850e-47 |
| Msa0255080 | Msa1169530 | 0.804065 | 2.583093e-49 | -8.615850e-47 |
| Msa0257490 | Msa1169530 | 0.818065 | 2.380400e-52 | -8.615850e-47 |
| Msa0259500 | Msa1169530 | 0.817012 | 4.110772e-52 | -8.615850e-47 |
| Msa0261720 | Msa1169530 | 0.810869 | 9.300074e-51 | -8.615850e-47 |
| Msa0275360 | Msa1169530 | 0.811688 | 6.176560e-51 | -8.615850e-47 |
| Msa0276630 | Msa1169530 | 0.817684 | 2.901641e-52 | -8.615850e-47 |
| Msa0281530 | Msa1169530 | 0.817703 | 2.874600e-52 | -8.615850e-47 |
| Msa0292030 | Msa1169530 | 0.810905 | 9.137671e-51 | -8.615850e-47 |
| Msa0296920 | Msa1169530 | 0.806827 | 6.809394e-50 | -8.615850e-47 |
| Msa0300120 | Msa1169530 | 0.809036 | 2.307146e-50 | -8.615850e-47 |
| Msa0305700 | Msa1169530 | 0.805133 | 1.546400e-49 | -8.615850e-47 |
| Msa0315850 | Msa1169530 | 0.812276 | 4.599320e-51 | -8.615850e-47 |
| Msa0319170 | Msa1169530 | 0.804461 | 2.136893e-49 | -8.615850e-47 |
| Msa0320590 | Msa1169530 | 0.814144 | 1.788949e-51 | -8.615850e-47 |
| Msa0326480 | Msa1169530 | 0.809103 | 2.232173e-50 | -8.615850e-47 |
| Msa0330310 | Msa1169530 | 0.820722 | 5.901777e-53 | -8.615850e-47 |
| Msa0336320 | Msa1169530 | 0.825083 | 5.688338e-54 | -8.615850e-47 |
| Msa0337060 | Msa1169530 | 0.803153 | 3.992963e-49 | -8.615850e-47 |
| Msa0341540 | Msa1169530 | 0.812703 | 3.710599e-51 | -8.615850e-47 |
| Msa0343850 | Msa1169530 | 0.810009 | 1.426398e-50 | -8.615850e-47 |
| Msa1107900 | Msa1169530 | 0.807240 | 5.567261e-50 | -8.615850e-47 |
| Msa1123470 | Msa1169530 | 0.809160 | 2.170097e-50 | -8.615850e-47 |
| Msa1126830 | Msa1169530 | 0.809457 | 1.874289e-50 | -8.615850e-47 |
| Msa1128600 | Msa1169530 | 0.804785 | 1.828163e-49 | -8.615850e-47 |
| Msa1135470 | Msa1169530 | 0.803107 | 4.082426e-49 | -8.615850e-47 |
| Msa1137570 | Msa1169530 | 0.807332 | 5.322965e-50 | -8.615850e-47 |
| Msa1160590 | Msa1169530 | 0.805458 | 1.322338e-49 | -8.615850e-47 |
| Msa1168550 | Msa1169530 | 0.800316 | 1.526263e-48 | -8.615850e-47 |
| Msa1168580 | Msa1169530 | 0.823559 | 1.297681e-53 | -8.615850e-47 |
| Msa1168590 | Msa1169530 | 0.801752 | 7.764530e-49 | -8.615850e-47 |
| Msa1169530 | Msa1169540 | 0.893685 | 4.994599e-75 | -8.615850e-47 |
| Msa1169530 | Msa1169550 | 0.926177 | 6.706836e-91 | -8.615850e-47 |
| Msa1169530 | Msa1193290 | 0.800629 | 1.317528e-48 | -8.615850e-47 |
| Msa1169530 | Msa1208880 | 0.800298 | 1.538981e-48 | -8.615850e-47 |
| Msa1169530 | Msa1210020 | 0.810609 | 1.058705e-50 | -8.615850e-47 |
| Msa1169530 | Msa1212950 | 0.827535 | 1.482478e-54 | -8.615850e-47 |
| Msa1169530 | Msa1221060 | 0.805478 | 1.309182e-49 | -8.615850e-47 |
| Msa1169530 | Msa1245930 | 0.804656 | 1.945062e-49 | -8.615850e-47 |
| Msa1169530 | Msa1251160 | 0.802147 | 6.439341e-49 | -8.615850e-47 |
| Msa1169530 | Msa1254730 | 0.813891 | 2.034437e-51 | -8.615850e-47 |
| Msa1169530 | Msa1256470 | 0.809050 | 2.291383e-50 | -8.615850e-47 |
| Msa1169530 | Msa1259060 | 0.803975 | 2.696783e-49 | -8.615850e-47 |
| Msa1169530 | Msa1270660 | 0.800209 | 1.604517e-48 | -8.615850e-47 |
| Msa1169530 | Msa1294820 | 0.802352 | 5.844182e-49 | -8.615850e-47 |
| Msa1169530 | Msa1296830 | 0.809501 | 1.833746e-50 | -8.615850e-47 |
| Msa1169530 | Msa1298510 | 0.812677 | 3.759749e-51 | -8.615850e-47 |
| Msa1169530 | Msa1299180 | -0.806087 | 9.751243e-50 | -8.615850e-47 |
| Msa1169530 | Msa1332590 | 0.807249 | 5.543207e-50 | -8.615850e-47 |
| Msa1169530 | Msa1335250 | 0.818457 | 1.940668e-52 | -8.615850e-47 |
| Msa1169530 | Msa1336560 | 0.821074 | 4.899251e-53 | -8.615850e-47 |
| Msa1169530 | Msa1346730 | 0.802823 | 4.673544e-49 | -8.615850e-47 |
| Msa1169530 | Msa1351540 | 0.812307 | 4.529135e-51 | -8.615850e-47 |
| Msa1169530 | Msa1357190 | 0.838328 | 3.069759e-57 | -8.615850e-47 |
| Msa1169530 | Msa1357890 | 0.811775 | 5.915406e-51 | -8.615850e-47 |
| Msa1169530 | Msa1361410 | 0.805398 | 1.361130e-49 | -8.615850e-47 |
| Msa1169530 | Msa1362420 | 0.800930 | 1.143808e-48 | -8.615850e-47 |
| Msa1169530 | Msa1367590 | 0.823732 | 1.182216e-53 | -8.615850e-47 |
| Msa1169530 | Msa1376650 | 0.834866 | 2.339974e-56 | -8.615850e-47 |
| Msa1169530 | Msa1381350 | 0.806415 | 8.319511e-50 | -8.615850e-47 |
| Msa1169530 | Msa1389850 | 0.814129 | 1.802729e-51 | -8.615850e-47 |
| Msa1169530 | Msa1389880 | 0.818568 | 1.831094e-52 | -8.615850e-47 |
| Msa1169530 | Msa1390700 | 0.804556 | 2.041608e-49 | -8.615850e-47 |
| Msa1169530 | Msa1392160 | -0.801467 | 8.883234e-49 | -8.615850e-47 |
| Msa1169530 | Msa1392910 | 0.801373 | 9.284538e-49 | -8.615850e-47 |
| Msa1169530 | Msa1394500 | 0.804023 | 2.635266e-49 | -8.615850e-47 |
| Msa1169530 | Msa1397120 | 0.801090 | 1.060944e-48 | -8.615850e-47 |
| Msa1169530 | Msa1398090 | 0.818492 | 1.905968e-52 | -8.615850e-47 |
| Msa1169530 | Msa1404940 | 0.813222 | 2.854841e-51 | -8.615850e-47 |
| Msa1169530 | Msa1410510 | 0.818006 | 2.454827e-52 | -8.615850e-47 |
| Msa1169530 | Msa1416370 | 0.820467 | 6.755977e-53 | -8.615850e-47 |
| Msa1169530 | Msa1419870 | 0.817304 | 3.534604e-52 | -8.615850e-47 |
| Msa1169530 | Msa1433390 | 0.831705 | 1.434257e-55 | -8.615850e-47 |
| Msa1169530 | Msa1450720 | 0.829841 | 4.107340e-55 | -8.615850e-47 |
| Msa1169530 | Msa1451160 | 0.812923 | 3.319920e-51 | -8.615850e-47 |
| Msa1169530 | Msa1454680 | 0.822955 | 1.796087e-53 | -8.615850e-47 |
| Msa1169530 | Msa1458810 | 0.800159 | 1.642566e-48 | -8.615850e-47 |
| Msa0485120 | Msa1169530 | 0.805367 | 1.381385e-49 | -8.615850e-47 |
| Msa0511770 | Msa1169530 | 0.802056 | 6.723401e-49 | -8.615850e-47 |
| Msa0518070 | Msa1169530 | -0.808952 | 2.405492e-50 | -8.615850e-47 |
| Msa0524500 | Msa1169530 | 0.824988 | 5.987416e-54 | -8.615850e-47 |
| Msa0542290 | Msa1169530 | 0.834055 | 3.738967e-56 | -8.615850e-47 |
| Msa0547160 | Msa1169530 | 0.825691 | 4.082645e-54 | -8.615850e-47 |
| Msa0547990 | Msa1169530 | 0.817917 | 2.570816e-52 | -8.615850e-47 |
| Msa0556060 | Msa1169530 | 0.824774 | 6.728799e-54 | -8.615850e-47 |
| Msa0581110 | Msa1169530 | 0.813343 | 2.685817e-51 | -8.615850e-47 |
| Msa0581130 | Msa1169530 | 0.800440 | 1.439566e-48 | -8.615850e-47 |
| Msa0601530 | Msa1169530 | 0.813860 | 2.067172e-51 | -8.615850e-47 |
| Msa0849030 | Msa1169530 | 0.806182 | 9.311610e-50 | -8.615850e-47 |
| Msa0892640 | Msa1169530 | 0.801168 | 1.022762e-48 | -8.615850e-47 |
| Msa0903780 | Msa1169530 | 0.807554 | 4.775034e-50 | -8.615850e-47 |
| Msa0918390 | Msa1169530 | 0.825908 | 3.626624e-54 | -8.615850e-47 |
| Msa0932570 | Msa1169530 | 0.843798 | 1.122307e-58 | -8.615850e-47 |
| Msa0969810 | Msa1169530 | 0.803391 | 3.565499e-49 | -8.615850e-47 |
| Msa0970530 | Msa1169530 | 0.814254 | 1.691664e-51 | -8.615850e-47 |
| Msa0970600 | Msa1169530 | 0.809135 | 2.197648e-50 | -8.615850e-47 |
| Msa0978250 | Msa1169530 | 0.810169 | 1.317595e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169530 | MtrunA17_Chr7g0263291 | 92.763 | 152 | 11 | 0 | 18 | 169 | 12 | 163 | 4.61e-92 | 265 |
| Msa1169530 | MtrunA17_Chr7g0263301 | 60.248 | 161 | 61 | 2 | 9 | 169 | 2 | 159 | 5.24e-54 | 168 |
| Msa1169530 | MtrunA17_Chr7g0263311 | 49.057 | 53 | 26 | 1 | 71 | 122 | 8 | 60 | 2.58e-12 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1169530 | AT3G58090.1 | 51.754 | 114 | 44 | 2 | 15 | 126 | 8 | 112 | 2.58e-33 | 119 |
Find 113 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGATTTAATTGAAAATTT+AGG | 0.081382 | 7_4:+62581980 | Msa1169530:three_prime_UTR |
| TAATGACACATAACAATATT+TGG | 0.095345 | 7_4:+62582237 | Msa1169530:three_prime_UTR |
| ATAACAATATTTGGGTTATT+TGG | 0.130012 | 7_4:+62582246 | Msa1169530:three_prime_UTR |
| TTGCCTTCTGCTTGCGGTTT+TGG | 0.187993 | 7_4:+62582476 | Msa1169530:three_prime_UTR |
| CATCGAACCACATAGGAATT+TGG | 0.220618 | 7_4:+62581627 | Msa1169530:CDS |
| AAGATTTAATTGAAAATTTA+GGG | 0.225449 | 7_4:+62581981 | Msa1169530:three_prime_UTR |
| AAGAAATCTATTCCTAAATC+TGG | 0.252000 | 7_4:+62581874 | Msa1169530:CDS |
| GCACTACTCTTCCCAGATTT+AGG | 0.253924 | 7_4:-62581886 | None:intergenic |
| CTGCTACCGGATACTATTTC+AGG | 0.274069 | 7_4:-62581565 | None:intergenic |
| TTGTAACCGGGGAATTAAAT+TGG | 0.300288 | 7_4:+62582212 | Msa1169530:three_prime_UTR |
| GACTGTATGATTAGATAATT+TGG | 0.306471 | 7_4:+62582416 | Msa1169530:three_prime_UTR |
| TGGGAGAATGGTTTGTGGGG+AGG | 0.323895 | 7_4:+62581653 | Msa1169530:CDS |
| AGAGGGCAAAGAAGAAAATA+AGG | 0.333305 | 7_4:+62581471 | Msa1169530:CDS |
| GGGAGAATGGTTTGTGGGGA+GGG | 0.334434 | 7_4:+62581654 | Msa1169530:CDS |
| GATCAGCTGAATGAACAATT+AGG | 0.336955 | 7_4:+62582057 | Msa1169530:three_prime_UTR |
| GATTGATATTATGTTGTAAC+CGG | 0.337748 | 7_4:+62582199 | Msa1169530:three_prime_UTR |
| AGCAAAGCCGCACGCAAGCC+TGG | 0.347113 | 7_4:-62582609 | None:intergenic |
| GTGTACTGGTATGCTGTGTT+GGG | 0.356040 | 7_4:+62582521 | Msa1169530:three_prime_UTR |
| CTGTGTTGGGGTGTCTCTAC+TGG | 0.364183 | 7_4:+62582534 | Msa1169530:three_prime_UTR |
| ATCGAACCACATAGGAATTT+GGG | 0.364456 | 7_4:+62581628 | Msa1169530:CDS |
| GGCTTGGGAGAATGGTTTGT+GGG | 0.370784 | 7_4:+62581649 | Msa1169530:CDS |
| TGTTCGGTGGGAGGCTCTCC+AGG | 0.371380 | 7_4:+62582591 | Msa1169530:three_prime_UTR |
| ACCGAGTATGACAAAGAATC+TGG | 0.379264 | 7_4:+62581721 | Msa1169530:CDS |
| AATGACACATAACAATATTT+GGG | 0.382379 | 7_4:+62582238 | Msa1169530:three_prime_UTR |
| TGTGTACTGGTATGCTGTGT+TGG | 0.382825 | 7_4:+62582520 | Msa1169530:three_prime_UTR |
| TTCCTCCCTTTGCTGTGTAC+TGG | 0.387091 | 7_4:+62582507 | Msa1169530:three_prime_UTR |
| GATAGGGACGATTTGTTCCT+AGG | 0.400444 | 7_4:+62582158 | Msa1169530:three_prime_UTR |
| GGAATTTGGGCTTGGGAGAA+TGG | 0.402637 | 7_4:+62581641 | Msa1169530:CDS |
| GTATTTGTAGCAATAGCAAT+AGG | 0.406270 | 7_4:+62582118 | Msa1169530:three_prime_UTR |
| CTTTAGGTTTCTGTTTGAAA+TGG | 0.408523 | 7_4:+62581447 | Msa1169530:intron |
| TTGGTGACAGGTTGTGTAGC+AGG | 0.410599 | 7_4:+62582435 | Msa1169530:three_prime_UTR |
| TTCAAACCCACTCGTAAAAC+AGG | 0.411499 | 7_4:-62582385 | None:intergenic |
| ACCACATAGGAATTTGGGCT+TGG | 0.411883 | 7_4:+62581633 | Msa1169530:CDS |
| TGCGTGCGGCTTTGCTGTTT+AGG | 0.415135 | 7_4:+62582616 | Msa1169530:three_prime_UTR |
| GGGCTTGGGAGAATGGTTTG+TGG | 0.416018 | 7_4:+62581648 | Msa1169530:CDS |
| CATTGGCGCAGAGGGTTGTT+CGG | 0.423791 | 7_4:+62581845 | Msa1169530:CDS |
| TTGACTTGGAGATGGTTGTC+AGG | 0.424578 | 7_4:+62582341 | Msa1169530:three_prime_UTR |
| TTTGGGTTATTTGGAGAGCT+AGG | 0.426784 | 7_4:+62582255 | Msa1169530:three_prime_UTR |
| TGTAGCAGGGCTGTTGGTCT+CGG | 0.435117 | 7_4:+62582449 | Msa1169530:three_prime_UTR |
| ATCAAAACAAAGAGAACAAA+AGG | 0.438164 | 7_4:+62581928 | Msa1169530:CDS |
| GTGATTCTGAAGATCTTGAT+TGG | 0.441563 | 7_4:+62581770 | Msa1169530:CDS |
| GACGGCGCTGCTGCTGCTAC+CGG | 0.450572 | 7_4:-62581578 | None:intergenic |
| GTGCTGCAGTATACTGCTGC+AGG | 0.451649 | 7_4:+62582564 | Msa1169530:three_prime_UTR |
| TCTTGATTGGCCGGAGTTGA+AGG | 0.457279 | 7_4:+62581783 | Msa1169530:CDS |
| GAAGTTCTCAGTCCTTTAGA+TGG | 0.458489 | 7_4:+62581805 | Msa1169530:CDS |
| ATTACAATCGCAGGCTCTCC+AGG | 0.465049 | 7_4:-62581532 | None:intergenic |
| ATCTAATTCTTCTGCGGCAA+GGG | 0.467917 | 7_4:+62581498 | Msa1169530:CDS |
| TCAATGCGGTTGTGAAAAGA+TGG | 0.472987 | 7_4:+62582291 | Msa1169530:three_prime_UTR |
| CCCAGATTCTTTGTCATACT+CGG | 0.473382 | 7_4:-62581722 | None:intergenic |
| AGCATTGCTGCTGGAAGGGA+CGG | 0.473470 | 7_4:-62581596 | None:intergenic |
| TACTGCTGCAGGGTGCTGTT+CGG | 0.473609 | 7_4:+62582575 | Msa1169530:three_prime_UTR |
| GGCAGTTTGCCTTCTGCTTG+CGG | 0.480160 | 7_4:+62582470 | Msa1169530:three_prime_UTR |
| CTGCCAAAACCGCAAGCAGA+AGG | 0.481308 | 7_4:-62582479 | None:intergenic |
| TTCTGAAGATCTTGATTGGC+CGG | 0.482353 | 7_4:+62581774 | Msa1169530:CDS |
| GCTTGGGAGAATGGTTTGTG+GGG | 0.486598 | 7_4:+62581650 | Msa1169530:CDS |
| CCACATAGGAATTTGGGCTT+GGG | 0.489077 | 7_4:+62581634 | Msa1169530:CDS |
| AGTGAAATTCCACCATCTAA+AGG | 0.490197 | 7_4:-62581817 | None:intergenic |
| ATTATACCAATTTAATTCCC+CGG | 0.493693 | 7_4:-62582218 | None:intergenic |
| TGCTGCAGGGTGCTGTTCGG+TGG | 0.502269 | 7_4:+62582578 | Msa1169530:three_prime_UTR |
| TGATTAGATAATTTGGTGAC+AGG | 0.511665 | 7_4:+62582423 | Msa1169530:three_prime_UTR |
| AGAAATCTATTCCTAAATCT+GGG | 0.513142 | 7_4:+62581875 | Msa1169530:CDS |
| GCTGCAGGGTGCTGTTCGGT+GGG | 0.514881 | 7_4:+62582579 | Msa1169530:three_prime_UTR |
| GCATACCAGTACACAGCAAA+GGG | 0.520968 | 7_4:-62582512 | None:intergenic |
| GATACTCAAAGCATTGCTGC+TGG | 0.527679 | 7_4:-62581605 | None:intergenic |
| CTCAAAGCATTGCTGCTGGA+AGG | 0.529613 | 7_4:-62581601 | None:intergenic |
| GTTTATGGGACGTTATTACT+CGG | 0.537141 | 7_4:+62581690 | Msa1169530:CDS |
| ACTCAAGACATTGGCGCAGA+GGG | 0.544285 | 7_4:+62581837 | Msa1169530:CDS |
| ACACAGCAAAGGGAGGAAGC+AGG | 0.545915 | 7_4:-62582502 | None:intergenic |
| ACGAGATCAAGGTGTTGACT+TGG | 0.548103 | 7_4:+62582327 | Msa1169530:three_prime_UTR |
| CAATAGCAATAGGATTATTG+TGG | 0.548416 | 7_4:+62582128 | Msa1169530:three_prime_UTR |
| CTGAGAACTTCCTTCAACTC+CGG | 0.550027 | 7_4:-62581793 | None:intergenic |
| GCAGGGTGCTGTTCGGTGGG+AGG | 0.552219 | 7_4:+62582582 | Msa1169530:three_prime_UTR |
| TGCGGCTTTGCTGTTTAGGA+AGG | 0.553113 | 7_4:+62582620 | Msa1169530:three_prime_UTR |
| TCAAAGCATTGCTGCTGGAA+GGG | 0.554064 | 7_4:-62581600 | None:intergenic |
| GTTTCTGTTTGAAATGGAAG+AGG | 0.555062 | 7_4:+62581453 | Msa1169530:CDS |
| TGGAATTTCACTCAAGACAT+TGG | 0.557096 | 7_4:+62581828 | Msa1169530:CDS |
| GAGCCTGCGATTGTAATTGA+CGG | 0.559057 | 7_4:+62581538 | Msa1169530:CDS |
| GATATGTCAATTATAAAGCA+AGG | 0.561600 | 7_4:+62582015 | Msa1169530:three_prime_UTR |
| TTTCTGTTTGAAATGGAAGA+GGG | 0.564578 | 7_4:+62581454 | Msa1169530:CDS |
| CCCAAGCCCAAATTCCTATG+TGG | 0.565828 | 7_4:-62581634 | None:intergenic |
| GGGCAAAGAAGAAAATAAGG+AGG | 0.566148 | 7_4:+62581474 | Msa1169530:CDS |
| CACCGTCTTCATACTCAACA+TGG | 0.568627 | 7_4:-62581750 | None:intergenic |
| CACTCAAGACATTGGCGCAG+AGG | 0.573004 | 7_4:+62581836 | Msa1169530:CDS |
| TTTATGGGACGTTATTACTC+GGG | 0.573677 | 7_4:+62581691 | Msa1169530:CDS |
| AGAGGTGGTAGACGAGATCA+AGG | 0.580064 | 7_4:+62582316 | Msa1169530:three_prime_UTR |
| GTTCTCAGTCCTTTAGATGG+TGG | 0.581755 | 7_4:+62581808 | Msa1169530:CDS |
| TGCTGCAGTATACTGCTGCA+GGG | 0.582602 | 7_4:+62582565 | Msa1169530:three_prime_UTR |
| GATCTAATTCTTCTGCGGCA+AGG | 0.585721 | 7_4:+62581497 | Msa1169530:CDS |
| AGCATACCAGTACACAGCAA+AGG | 0.586490 | 7_4:-62582513 | None:intergenic |
| GGAAATTTGTGCTGATGAGA+TGG | 0.587712 | 7_4:+62582078 | Msa1169530:three_prime_UTR |
| ACTCCGTCAATTACAATCGC+AGG | 0.591670 | 7_4:-62581541 | None:intergenic |
| GGAGTGCCTGAAATAGTATC+CGG | 0.596939 | 7_4:+62581559 | Msa1169530:CDS |
| CCGAGTATGACAAAGAATCT+GGG | 0.597649 | 7_4:+62581722 | Msa1169530:CDS |
| TGGTGACAGGTTGTGTAGCA+GGG | 0.601386 | 7_4:+62582436 | Msa1169530:three_prime_UTR |
| AGGTTGTGTAGCAGGGCTGT+TGG | 0.610054 | 7_4:+62582443 | Msa1169530:three_prime_UTR |
| CAATGCGGTTGTGAAAAGAT+GGG | 0.615268 | 7_4:+62582292 | Msa1169530:three_prime_UTR |
| TGAGTATCATCGAACCACAT+AGG | 0.617574 | 7_4:+62581620 | Msa1169530:CDS |
| TCAAGGTGTTGACTTGGAGA+TGG | 0.617912 | 7_4:+62582333 | Msa1169530:three_prime_UTR |
| ATTGATATTATGTTGTAACC+GGG | 0.627535 | 7_4:+62582200 | Msa1169530:three_prime_UTR |
| TGTACTGGTATGCTGTGTTG+GGG | 0.627828 | 7_4:+62582522 | Msa1169530:three_prime_UTR |
| GGCAAAGAAGAAAATAAGGA+GGG | 0.632888 | 7_4:+62581475 | Msa1169530:CDS |
| TGTGAAAAGATGGGAAGAGG+TGG | 0.635735 | 7_4:+62582301 | Msa1169530:three_prime_UTR |
| TGACTTGGAGATGGTTGTCA+GGG | 0.640187 | 7_4:+62582342 | Msa1169530:three_prime_UTR |
| GGTTGTGAAAAGATGGGAAG+AGG | 0.645183 | 7_4:+62582298 | Msa1169530:three_prime_UTR |
| ACCCACTCGTAAAACAGGCA+CGG | 0.645325 | 7_4:-62582380 | None:intergenic |
| AGGCTCTCCAGGCTTGCGTG+CGG | 0.652658 | 7_4:+62582602 | Msa1169530:three_prime_UTR |
| TACCAGTACACAGCAAAGGG+AGG | 0.655145 | 7_4:-62582509 | None:intergenic |
| GGAGGGATCTAATTCTTCTG+CGG | 0.660755 | 7_4:+62581492 | Msa1169530:CDS |
| TTGATATTATGTTGTAACCG+GGG | 0.679324 | 7_4:+62582201 | Msa1169530:three_prime_UTR |
| TACCATGTTGAGTATGAAGA+CGG | 0.707224 | 7_4:+62581748 | Msa1169530:CDS |
| TATCTAATCATACAGTCACG+TGG | 0.710065 | 7_4:-62582410 | None:intergenic |
| GAATGATAGCATCTTCAATG+CGG | 0.737371 | 7_4:+62582277 | Msa1169530:three_prime_UTR |
| AGTATGACAAAGAATCTGGG+TGG | 0.768571 | 7_4:+62581725 | Msa1169530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAAAAATTAAACATCA+AGG | - | chr7_4:62579475-62579494 | None:intergenic | 10.0% |
| !! | ATGTTTATGATATTAAAATA+TGG | + | chr7_4:62579509-62579528 | Msa1169530:intron | 10.0% |
| !! | TATAAAACTTCATAATTAAT+CGG | - | chr7_4:62579571-62579590 | None:intergenic | 10.0% |
| !!! | CAAATTTTTCTTAATTTTTT+AGG | - | chr7_4:62579696-62579715 | None:intergenic | 10.0% |
| !! | ATCTATAAAAATACATAAAA+AGG | - | chr7_4:62579827-62579846 | None:intergenic | 10.0% |
| !! | AAAATTTAAAAACAAAACAA+CGG | - | chr7_4:62579897-62579916 | None:intergenic | 10.0% |
| !!! | TAATAAATTTGTTCTTTTTT+TGG | - | chr7_4:62580903-62580922 | None:intergenic | 10.0% |
| !! | AAGATTTAATTGAAAATTTA+GGG | + | chr7_4:62581981-62582000 | Msa1169530:three_prime_UTR | 10.0% |
| !!! | TATAACATTTTATTGTCATT+TGG | + | chr7_4:62579199-62579218 | Msa1169530:intron | 15.0% |
| !! | TGTTTGTAATTGATATTTAA+AGG | + | chr7_4:62579374-62579393 | Msa1169530:intron | 15.0% |
| !!! | TTTTTTTATAATTTTTTCCG+AGG | + | chr7_4:62579485-62579504 | Msa1169530:intron | 15.0% |
| !!! | AAATTAAAATTTTACTACCA+GGG | - | chr7_4:62579950-62579969 | None:intergenic | 15.0% |
| !!! | AAAATTAAAATTTTACTACC+AGG | - | chr7_4:62579951-62579970 | None:intergenic | 15.0% |
| !! | TAATAAGAATATCAAATTAC+AGG | + | chr7_4:62580069-62580088 | Msa1169530:intron | 15.0% |
| !! | AATAAGAATATCAAATTACA+GGG | + | chr7_4:62580070-62580089 | Msa1169530:intron | 15.0% |
| !!! | TATGTGTTTTTTATTTTACA+TGG | + | chr7_4:62580099-62580118 | Msa1169530:intron | 15.0% |
| !! | AAATGACATATAATTTGAAA+CGG | - | chr7_4:62580198-62580217 | None:intergenic | 15.0% |
| !! | AAACAAAAATTAAAGAGAAT+TGG | - | chr7_4:62580476-62580495 | None:intergenic | 15.0% |
| !! | ACATAAATATCATTCATTAA+TGG | - | chr7_4:62580505-62580524 | None:intergenic | 15.0% |
| !!! | ACATTAACATCATTTTTTAA+TGG | + | chr7_4:62580583-62580602 | Msa1169530:intron | 15.0% |
| !!! | CATTAACATCATTTTTTAAT+GGG | + | chr7_4:62580584-62580603 | Msa1169530:intron | 15.0% |
| !! | ATGAGTTATGATAAATAAAT+TGG | - | chr7_4:62580682-62580701 | None:intergenic | 15.0% |
| !!! | AGTGACATATAATTTTTTTT+TGG | + | chr7_4:62580819-62580838 | Msa1169530:intron | 15.0% |
| !! | CAAATTTATTACAGTAATTA+AGG | + | chr7_4:62580912-62580931 | Msa1169530:intron | 15.0% |
| !! | AAAACTTAAAATATTGCTAT+AGG | + | chr7_4:62581366-62581385 | Msa1169530:intron | 15.0% |
| !! | GAAGATTTAATTGAAAATTT+AGG | + | chr7_4:62581980-62581999 | Msa1169530:three_prime_UTR | 15.0% |
| !!! | TTTTCTTAATTTTTTAGGCA+TGG | - | chr7_4:62579691-62579710 | None:intergenic | 20.0% |
| !! | ATATTTATGACGTTAACATA+TGG | - | chr7_4:62579985-62580004 | None:intergenic | 20.0% |
| !! | AATTGAACCTATAATATACA+CGG | - | chr7_4:62580140-62580159 | None:intergenic | 20.0% |
| !! | TGGAGTATATATAAATTAGA+GGG | - | chr7_4:62580174-62580193 | None:intergenic | 20.0% |
| !! | ATGGAGTATATATAAATTAG+AGG | - | chr7_4:62580175-62580194 | None:intergenic | 20.0% |
| !!! | TCTAAATTATATGTCACTTT+AGG | + | chr7_4:62580235-62580254 | Msa1169530:intron | 20.0% |
| !!! | CTAAATTATATGTCACTTTA+GGG | + | chr7_4:62580236-62580255 | Msa1169530:intron | 20.0% |
| !! | ATAATAAATAGTACATCATC+CGG | - | chr7_4:62580441-62580460 | None:intergenic | 20.0% |
| !! | TAATTAAATCAAGATATCTC+AGG | + | chr7_4:62581289-62581308 | Msa1169530:intron | 20.0% |
| !! | GATGTTCAAAAATTGTTTAT+GGG | + | chr7_4:62581676-62581695 | Msa1169530:CDS | 20.0% |
| !! | TAATGACACATAACAATATT+TGG | + | chr7_4:62582237-62582256 | Msa1169530:three_prime_UTR | 20.0% |
| !! | AATGACACATAACAATATTT+GGG | + | chr7_4:62582238-62582257 | Msa1169530:three_prime_UTR | 20.0% |
| !!! | ATAACAATATTTGGGTTATT+TGG | + | chr7_4:62582246-62582265 | Msa1169530:three_prime_UTR | 20.0% |
| ! | TTAATATCATAAACATGCCT+CGG | - | chr7_4:62579505-62579524 | None:intergenic | 25.0% |
| ! | TGTTCAAAAAAGCAACATAA+CGG | - | chr7_4:62580025-62580044 | None:intergenic | 25.0% |
| ! | TCAAATTCCGTGTATATTAT+AGG | + | chr7_4:62580130-62580149 | Msa1169530:intron | 25.0% |
| !! | TATTATGTCATTTACACCAT+CGG | + | chr7_4:62580288-62580307 | Msa1169530:intron | 25.0% |
| ! | CATTCATTAAATGATGTATG+TGG | - | chr7_4:62580384-62580403 | None:intergenic | 25.0% |
| !! | TTTTTGCATATAATAGTGAC+CGG | + | chr7_4:62580419-62580438 | Msa1169530:intron | 25.0% |
| ! | GACATATAATTTGAAAGAGA+TGG | + | chr7_4:62580852-62580871 | Msa1169530:intron | 25.0% |
| !! | TAAGGAACAATTTTGAATTG+AGG | + | chr7_4:62580930-62580949 | Msa1169530:intron | 25.0% |
| !! | TTTTGAATTGAGGCTATAAA+TGG | + | chr7_4:62580940-62580959 | Msa1169530:intron | 25.0% |
| !! | ATGCAATATATATTTTGCTG+CGG | - | chr7_4:62581189-62581208 | None:intergenic | 25.0% |
| !!! | TTGTTTCTTGTTTTTGCTTT+AGG | + | chr7_4:62581431-62581450 | Msa1169530:intron | 25.0% |
| ! | GGATGTTCAAAAATTGTTTA+TGG | + | chr7_4:62581675-62581694 | Msa1169530:CDS | 25.0% |
| ! | AAGAAATCTATTCCTAAATC+TGG | + | chr7_4:62581874-62581893 | Msa1169530:CDS | 25.0% |
| ! | AGAAATCTATTCCTAAATCT+GGG | + | chr7_4:62581875-62581894 | Msa1169530:CDS | 25.0% |
| ! | ATCAAAACAAAGAGAACAAA+AGG | + | chr7_4:62581928-62581947 | Msa1169530:CDS | 25.0% |
| ! | GATATGTCAATTATAAAGCA+AGG | + | chr7_4:62582015-62582034 | Msa1169530:three_prime_UTR | 25.0% |
| !!! | ATTATTGTGGTTTTGTAGAT+AGG | + | chr7_4:62582141-62582160 | Msa1169530:three_prime_UTR | 25.0% |
| !!! | TTATTGTGGTTTTGTAGATA+GGG | + | chr7_4:62582142-62582161 | Msa1169530:three_prime_UTR | 25.0% |
| ! | GATTGATATTATGTTGTAAC+CGG | + | chr7_4:62582199-62582218 | Msa1169530:three_prime_UTR | 25.0% |
| ! | ATTGATATTATGTTGTAACC+GGG | + | chr7_4:62582200-62582219 | Msa1169530:three_prime_UTR | 25.0% |
| ! | ATTATACCAATTTAATTCCC+CGG | - | chr7_4:62582221-62582240 | None:intergenic | 25.0% |
| ! | GACTGTATGATTAGATAATT+TGG | + | chr7_4:62582416-62582435 | Msa1169530:three_prime_UTR | 25.0% |
| TTAATCTCTTCTTCTTCTAG+TGG | + | chr7_4:62579311-62579330 | Msa1169530:intron | 30.0% | |
| TCAAAGTCTAAACAAACAAG+TGG | - | chr7_4:62579343-62579362 | None:intergenic | 30.0% | |
| !!! | TTTTTGCTGTTTGTAGTTTG+AGG | + | chr7_4:62579417-62579436 | Msa1169530:intron | 30.0% |
| !! | ATTCGTAATTAATTTGTCCC+TGG | + | chr7_4:62579930-62579949 | Msa1169530:intron | 30.0% |
| ! | GACATATAATTTGAAACGGA+TGG | - | chr7_4:62580194-62580213 | None:intergenic | 30.0% |
| GATGGTGTAAATGACATAAT+AGG | - | chr7_4:62580289-62580308 | None:intergenic | 30.0% | |
| CGTTCATTAAATGATGTATG+TGG | + | chr7_4:62580345-62580364 | Msa1169530:intron | 30.0% | |
| ! | AAGCACTGTTAAATGGTTAT+CGG | - | chr7_4:62581084-62581103 | None:intergenic | 30.0% |
| !! | TTTCGAAAAGCACTGTTAAA+TGG | - | chr7_4:62581091-62581110 | None:intergenic | 30.0% |
| ! | CTTTAGGTTTCTGTTTGAAA+TGG | + | chr7_4:62581447-62581466 | Msa1169530:intron | 30.0% |
| ! | TTTCTGTTTGAAATGGAAGA+GGG | + | chr7_4:62581454-62581473 | Msa1169530:CDS | 30.0% |
| !!! | GTTCTCTTTGTTTTGATTTG+AGG | - | chr7_4:62581925-62581944 | None:intergenic | 30.0% |
| GTATTTGTAGCAATAGCAAT+AGG | + | chr7_4:62582118-62582137 | Msa1169530:three_prime_UTR | 30.0% | |
| CAATAGCAATAGGATTATTG+TGG | + | chr7_4:62582128-62582147 | Msa1169530:three_prime_UTR | 30.0% | |
| ! | CTATAGCAACAAATTTTCCT+AGG | - | chr7_4:62582178-62582197 | None:intergenic | 30.0% |
| TTGATATTATGTTGTAACCG+GGG | + | chr7_4:62582201-62582220 | Msa1169530:three_prime_UTR | 30.0% | |
| ! | TGATTAGATAATTTGGTGAC+AGG | + | chr7_4:62582423-62582442 | Msa1169530:three_prime_UTR | 30.0% |
| !! | ATATTTAAAGGCGTTGTCTG+AGG | + | chr7_4:62579386-62579405 | Msa1169530:intron | 35.0% |
| !! | TATTTAAAGGCGTTGTCTGA+GGG | + | chr7_4:62579387-62579406 | Msa1169530:intron | 35.0% |
| CATAATTAATCGGTCACTTG+TGG | - | chr7_4:62579561-62579580 | None:intergenic | 35.0% | |
| TCCGATTAATCGTATACTCA+CGG | - | chr7_4:62579722-62579741 | None:intergenic | 35.0% | |
| GTATACGATTAATCGGAACA+AGG | + | chr7_4:62579725-62579744 | Msa1169530:intron | 35.0% | |
| TGAACATTGCATACGTTACA+AGG | + | chr7_4:62580039-62580058 | Msa1169530:intron | 35.0% | |
| TTGCTTATAATAGTGACCGA+TGG | - | chr7_4:62580307-62580326 | None:intergenic | 35.0% | |
| ! | TGACTCTGAAAACCCTAAAA+CGG | - | chr7_4:62581024-62581043 | None:intergenic | 35.0% |
| !! | CGAAATTCCCACATTTTGAT+AGG | + | chr7_4:62581106-62581125 | Msa1169530:intron | 35.0% |
| ! | CGTTTTGCCTATCAAAATGT+GGG | - | chr7_4:62581116-62581135 | None:intergenic | 35.0% |
| ! | TCGTTTTGCCTATCAAAATG+TGG | - | chr7_4:62581117-62581136 | None:intergenic | 35.0% |
| ! | CAATATATATTTTGCTGCGG+CGG | - | chr7_4:62581186-62581205 | None:intergenic | 35.0% |
| !! | TTGCTATAGGCGTTGAATTT+AGG | + | chr7_4:62581379-62581398 | Msa1169530:intron | 35.0% |
| ! | GTTTCTGTTTGAAATGGAAG+AGG | + | chr7_4:62581453-62581472 | Msa1169530:CDS | 35.0% |
| AGAGGGCAAAGAAGAAAATA+AGG | + | chr7_4:62581471-62581490 | Msa1169530:CDS | 35.0% | |
| GGCAAAGAAGAAAATAAGGA+GGG | + | chr7_4:62581475-62581494 | Msa1169530:CDS | 35.0% | |
| ATCGAACCACATAGGAATTT+GGG | + | chr7_4:62581628-62581647 | Msa1169530:CDS | 35.0% | |
| GTTTATGGGACGTTATTACT+CGG | + | chr7_4:62581690-62581709 | Msa1169530:CDS | 35.0% | |
| TTTATGGGACGTTATTACTC+GGG | + | chr7_4:62581691-62581710 | Msa1169530:CDS | 35.0% | |
| TACCATGTTGAGTATGAAGA+CGG | + | chr7_4:62581748-62581767 | Msa1169530:CDS | 35.0% | |
| ! | GTGATTCTGAAGATCTTGAT+TGG | + | chr7_4:62581770-62581789 | Msa1169530:CDS | 35.0% |
| AGTGAAATTCCACCATCTAA+AGG | - | chr7_4:62581820-62581839 | None:intergenic | 35.0% | |
| TGGAATTTCACTCAAGACAT+TGG | + | chr7_4:62581828-62581847 | Msa1169530:CDS | 35.0% | |
| GATCAGCTGAATGAACAATT+AGG | + | chr7_4:62582057-62582076 | Msa1169530:three_prime_UTR | 35.0% | |
| TTGTAACCGGGGAATTAAAT+TGG | + | chr7_4:62582212-62582231 | Msa1169530:three_prime_UTR | 35.0% | |
| GAATGATAGCATCTTCAATG+CGG | + | chr7_4:62582277-62582296 | Msa1169530:three_prime_UTR | 35.0% | |
| TATCTAATCATACAGTCACG+TGG | - | chr7_4:62582413-62582432 | None:intergenic | 35.0% | |
| !! | TCATTTGGTTTGCTTGTGTG+TGG | + | chr7_4:62579214-62579233 | Msa1169530:intron | 40.0% |
| !! | ATTTAAAGGCGTTGTCTGAG+GGG | + | chr7_4:62579388-62579407 | Msa1169530:intron | 40.0% |
| !! | TTGCTGTTTGTAGTTTGAGG+AGG | + | chr7_4:62579420-62579439 | Msa1169530:intron | 40.0% |
| CGATTAATCGTATACTCACG+GGG | - | chr7_4:62579720-62579739 | None:intergenic | 40.0% | |
| CCGATTAATCGTATACTCAC+GGG | - | chr7_4:62579721-62579740 | None:intergenic | 40.0% | |
| CCCGTGAGTATACGATTAAT+CGG | + | chr7_4:62579718-62579737 | Msa1169530:intron | 40.0% | |
| ! | GGTTGCAATTTTGCACGTTT+TGG | + | chr7_4:62579746-62579765 | Msa1169530:intron | 40.0% |
| !! | CTTTAACTTGTGCCCTTATG+CGG | - | chr7_4:62580625-62580644 | None:intergenic | 40.0% |
| TGCATGTAGGACACATGTTA+AGG | - | chr7_4:62580758-62580777 | None:intergenic | 40.0% | |
| ! | CTATGCTAACTTGTGCATGT+AGG | - | chr7_4:62580771-62580790 | None:intergenic | 40.0% |
| AAATGAACGATGCGTTTACC+CGG | + | chr7_4:62580975-62580994 | Msa1169530:intron | 40.0% | |
| ! | TCATGCGTTTACCCGTTTTA+GGG | + | chr7_4:62581009-62581028 | Msa1169530:intron | 40.0% |
| ! | GACTCTGAAAACCCTAAAAC+GGG | - | chr7_4:62581023-62581042 | None:intergenic | 40.0% |
| GTTATCGGAAGCTATATCTC+CGG | - | chr7_4:62581069-62581088 | None:intergenic | 40.0% | |
| ! | TTTCCTCTCAAGCTTTGTCT+CGG | + | chr7_4:62581155-62581174 | Msa1169530:intron | 40.0% |
| GGGCAAAGAAGAAAATAAGG+AGG | + | chr7_4:62581474-62581493 | Msa1169530:CDS | 40.0% | |
| ATCTAATTCTTCTGCGGCAA+GGG | + | chr7_4:62581498-62581517 | Msa1169530:CDS | 40.0% | |
| ! | GCAAGGGTTTATGATTTTCC+TGG | + | chr7_4:62581514-62581533 | Msa1169530:CDS | 40.0% |
| TGAGTATCATCGAACCACAT+AGG | + | chr7_4:62581620-62581639 | Msa1169530:CDS | 40.0% | |
| CATCGAACCACATAGGAATT+TGG | + | chr7_4:62581627-62581646 | Msa1169530:CDS | 40.0% | |
| ACCGAGTATGACAAAGAATC+TGG | + | chr7_4:62581721-62581740 | Msa1169530:CDS | 40.0% | |
| CCCAGATTCTTTGTCATACT+CGG | - | chr7_4:62581725-62581744 | None:intergenic | 40.0% | |
| CCGAGTATGACAAAGAATCT+GGG | + | chr7_4:62581722-62581741 | Msa1169530:CDS | 40.0% | |
| AGTATGACAAAGAATCTGGG+TGG | + | chr7_4:62581725-62581744 | Msa1169530:CDS | 40.0% | |
| ! | TTCTGAAGATCTTGATTGGC+CGG | + | chr7_4:62581774-62581793 | Msa1169530:CDS | 40.0% |
| GAAGTTCTCAGTCCTTTAGA+TGG | + | chr7_4:62581805-62581824 | Msa1169530:CDS | 40.0% | |
| ! | GGAAATTTGTGCTGATGAGA+TGG | + | chr7_4:62582078-62582097 | Msa1169530:three_prime_UTR | 40.0% |
| ! | TTTGGGTTATTTGGAGAGCT+AGG | + | chr7_4:62582255-62582274 | Msa1169530:three_prime_UTR | 40.0% |
| TCAATGCGGTTGTGAAAAGA+TGG | + | chr7_4:62582291-62582310 | Msa1169530:three_prime_UTR | 40.0% | |
| CAATGCGGTTGTGAAAAGAT+GGG | + | chr7_4:62582292-62582311 | Msa1169530:three_prime_UTR | 40.0% | |
| TTCAAACCCACTCGTAAAAC+AGG | - | chr7_4:62582388-62582407 | None:intergenic | 40.0% | |
| ! | GAAGGATGCTGCTGTATTTT+TGG | + | chr7_4:62582638-62582657 | Msa1169530:three_prime_UTR | 40.0% |
| !!! | ATGCTGCTGTATTTTTGGTG+TGG | + | chr7_4:62582643-62582662 | Msa1169530:three_prime_UTR | 40.0% |
| ! | GTCATGCGTTTACCCGTTTT+AGG | + | chr7_4:62581008-62581027 | Msa1169530:intron | 45.0% |
| ! | TTCCTCTCAAGCTTTGTCTC+GGG | + | chr7_4:62581156-62581175 | Msa1169530:intron | 45.0% |
| GGAGGGATCTAATTCTTCTG+CGG | + | chr7_4:62581492-62581511 | Msa1169530:CDS | 45.0% | |
| GATCTAATTCTTCTGCGGCA+AGG | + | chr7_4:62581497-62581516 | Msa1169530:CDS | 45.0% | |
| GAGCCTGCGATTGTAATTGA+CGG | + | chr7_4:62581538-62581557 | Msa1169530:CDS | 45.0% | |
| ACTCCGTCAATTACAATCGC+AGG | - | chr7_4:62581544-62581563 | None:intergenic | 45.0% | |
| ! | GGAGTGCCTGAAATAGTATC+CGG | + | chr7_4:62581559-62581578 | Msa1169530:CDS | 45.0% |
| CTGCTACCGGATACTATTTC+AGG | - | chr7_4:62581568-62581587 | None:intergenic | 45.0% | |
| !! | TCAAAGCATTGCTGCTGGAA+GGG | - | chr7_4:62581603-62581622 | None:intergenic | 45.0% |
| !! | GATACTCAAAGCATTGCTGC+TGG | - | chr7_4:62581608-62581627 | None:intergenic | 45.0% |
| ACCACATAGGAATTTGGGCT+TGG | + | chr7_4:62581633-62581652 | Msa1169530:CDS | 45.0% | |
| CCACATAGGAATTTGGGCTT+GGG | + | chr7_4:62581634-62581653 | Msa1169530:CDS | 45.0% | |
| CACCGTCTTCATACTCAACA+TGG | - | chr7_4:62581753-62581772 | None:intergenic | 45.0% | |
| CTGAGAACTTCCTTCAACTC+CGG | - | chr7_4:62581796-62581815 | None:intergenic | 45.0% | |
| GTTCTCAGTCCTTTAGATGG+TGG | + | chr7_4:62581808-62581827 | Msa1169530:CDS | 45.0% | |
| GCACTACTCTTCCCAGATTT+AGG | - | chr7_4:62581889-62581908 | None:intergenic | 45.0% | |
| ! | GATAGGGACGATTTGTTCCT+AGG | + | chr7_4:62582158-62582177 | Msa1169530:three_prime_UTR | 45.0% |
| GGTTGTGAAAAGATGGGAAG+AGG | + | chr7_4:62582298-62582317 | Msa1169530:three_prime_UTR | 45.0% | |
| TGTGAAAAGATGGGAAGAGG+TGG | + | chr7_4:62582301-62582320 | Msa1169530:three_prime_UTR | 45.0% | |
| !! | ACGAGATCAAGGTGTTGACT+TGG | + | chr7_4:62582327-62582346 | Msa1169530:three_prime_UTR | 45.0% |
| !! | TCAAGGTGTTGACTTGGAGA+TGG | + | chr7_4:62582333-62582352 | Msa1169530:three_prime_UTR | 45.0% |
| !! | TTGACTTGGAGATGGTTGTC+AGG | + | chr7_4:62582341-62582360 | Msa1169530:three_prime_UTR | 45.0% |
| ! | TGACTTGGAGATGGTTGTCA+GGG | + | chr7_4:62582342-62582361 | Msa1169530:three_prime_UTR | 45.0% |
| GCATACCAGTACACAGCAAA+GGG | - | chr7_4:62582515-62582534 | None:intergenic | 45.0% | |
| AGCATACCAGTACACAGCAA+AGG | - | chr7_4:62582516-62582535 | None:intergenic | 45.0% | |
| ! | TGTGTACTGGTATGCTGTGT+TGG | + | chr7_4:62582520-62582539 | Msa1169530:three_prime_UTR | 45.0% |
| ! | GTGTACTGGTATGCTGTGTT+GGG | + | chr7_4:62582521-62582540 | Msa1169530:three_prime_UTR | 45.0% |
| ! | TGTACTGGTATGCTGTGTTG+GGG | + | chr7_4:62582522-62582541 | Msa1169530:three_prime_UTR | 45.0% |
| !!! | TATTTTTGGTGTGGTGCTGC+AGG | + | chr7_4:62582652-62582671 | Msa1169530:three_prime_UTR | 45.0% |
| ATGCTAACCTGTGCCGCATA+AGG | + | chr7_4:62580609-62580628 | Msa1169530:intron | 50.0% | |
| TGCTAACCTGTGCCGCATAA+GGG | + | chr7_4:62580610-62580629 | Msa1169530:intron | 50.0% | |
| CGGTGAGCGAGAAGAAAGAA+GGG | - | chr7_4:62581049-62581068 | None:intergenic | 50.0% | |
| CCTTCTTTCTTCTCGCTCAC+CGG | + | chr7_4:62581047-62581066 | Msa1169530:intron | 50.0% | |
| TACCCGAGACAAAGCTTGAG+AGG | - | chr7_4:62581161-62581180 | None:intergenic | 50.0% | |
| ATTACAATCGCAGGCTCTCC+AGG | - | chr7_4:62581535-62581554 | None:intergenic | 50.0% | |
| !! | CTCAAAGCATTGCTGCTGGA+AGG | - | chr7_4:62581604-62581623 | None:intergenic | 50.0% |
| CCCAAGCCCAAATTCCTATG+TGG | - | chr7_4:62581637-62581656 | None:intergenic | 50.0% | |
| GGAATTTGGGCTTGGGAGAA+TGG | + | chr7_4:62581641-62581660 | Msa1169530:CDS | 50.0% | |
| ! | GGCTTGGGAGAATGGTTTGT+GGG | + | chr7_4:62581649-62581668 | Msa1169530:CDS | 50.0% |
| ! | GCTTGGGAGAATGGTTTGTG+GGG | + | chr7_4:62581650-62581669 | Msa1169530:CDS | 50.0% |
| ! | TCTTGATTGGCCGGAGTTGA+AGG | + | chr7_4:62581783-62581802 | Msa1169530:CDS | 50.0% |
| ACTCAAGACATTGGCGCAGA+GGG | + | chr7_4:62581837-62581856 | Msa1169530:CDS | 50.0% | |
| AGAGGTGGTAGACGAGATCA+AGG | + | chr7_4:62582316-62582335 | Msa1169530:three_prime_UTR | 50.0% | |
| ACCCACTCGTAAAACAGGCA+CGG | - | chr7_4:62582383-62582402 | None:intergenic | 50.0% | |
| ! | TTGGTGACAGGTTGTGTAGC+AGG | + | chr7_4:62582435-62582454 | Msa1169530:three_prime_UTR | 50.0% |
| TGGTGACAGGTTGTGTAGCA+GGG | + | chr7_4:62582436-62582455 | Msa1169530:three_prime_UTR | 50.0% | |
| ! | TTGCCTTCTGCTTGCGGTTT+TGG | + | chr7_4:62582476-62582495 | Msa1169530:three_prime_UTR | 50.0% |
| ! | TTCCTCCCTTTGCTGTGTAC+TGG | + | chr7_4:62582507-62582526 | Msa1169530:three_prime_UTR | 50.0% |
| TACCAGTACACAGCAAAGGG+AGG | - | chr7_4:62582512-62582531 | None:intergenic | 50.0% | |
| TGCTGCAGTATACTGCTGCA+GGG | + | chr7_4:62582565-62582584 | Msa1169530:three_prime_UTR | 50.0% | |
| !! | TGCGGCTTTGCTGTTTAGGA+AGG | + | chr7_4:62582620-62582639 | Msa1169530:three_prime_UTR | 50.0% |
| AACGATGCGTTTACCCGGAG+CGG | + | chr7_4:62580980-62580999 | Msa1169530:intron | 55.0% | |
| CCGGTGAGCGAGAAGAAAGA+AGG | - | chr7_4:62581050-62581069 | None:intergenic | 55.0% | |
| AGCATTGCTGCTGGAAGGGA+CGG | - | chr7_4:62581599-62581618 | None:intergenic | 55.0% | |
| GGGCTTGGGAGAATGGTTTG+TGG | + | chr7_4:62581648-62581667 | Msa1169530:CDS | 55.0% | |
| ! | TGGGAGAATGGTTTGTGGGG+AGG | + | chr7_4:62581653-62581672 | Msa1169530:CDS | 55.0% |
| ! | GGGAGAATGGTTTGTGGGGA+GGG | + | chr7_4:62581654-62581673 | Msa1169530:CDS | 55.0% |
| CACTCAAGACATTGGCGCAG+AGG | + | chr7_4:62581836-62581855 | Msa1169530:CDS | 55.0% | |
| CATTGGCGCAGAGGGTTGTT+CGG | + | chr7_4:62581845-62581864 | Msa1169530:CDS | 55.0% | |
| ! | GCCGTGCCTGTTTTACGAGT+GGG | + | chr7_4:62582379-62582398 | Msa1169530:three_prime_UTR | 55.0% |
| AGGTTGTGTAGCAGGGCTGT+TGG | + | chr7_4:62582443-62582462 | Msa1169530:three_prime_UTR | 55.0% | |
| ! | TGTAGCAGGGCTGTTGGTCT+CGG | + | chr7_4:62582449-62582468 | Msa1169530:three_prime_UTR | 55.0% |
| GGCAGTTTGCCTTCTGCTTG+CGG | + | chr7_4:62582470-62582489 | Msa1169530:three_prime_UTR | 55.0% | |
| CTGCCAAAACCGCAAGCAGA+AGG | - | chr7_4:62582482-62582501 | None:intergenic | 55.0% | |
| ACACAGCAAAGGGAGGAAGC+AGG | - | chr7_4:62582505-62582524 | None:intergenic | 55.0% | |
| ! | CTGTGTTGGGGTGTCTCTAC+TGG | + | chr7_4:62582534-62582553 | Msa1169530:three_prime_UTR | 55.0% |
| GTGCTGCAGTATACTGCTGC+AGG | + | chr7_4:62582564-62582583 | Msa1169530:three_prime_UTR | 55.0% | |
| !! | TACTGCTGCAGGGTGCTGTT+CGG | + | chr7_4:62582575-62582594 | Msa1169530:three_prime_UTR | 55.0% |
| !! | TGCGTGCGGCTTTGCTGTTT+AGG | + | chr7_4:62582616-62582635 | Msa1169530:three_prime_UTR | 55.0% |
| CTTGTGCCCTTATGCGGCAC+AGG | - | chr7_4:62580619-62580638 | None:intergenic | 60.0% | |
| ACGATGCGTTTACCCGGAGC+GGG | + | chr7_4:62580981-62581000 | Msa1169530:intron | 60.0% | |
| ! | CGCCGTGCCTGTTTTACGAG+TGG | + | chr7_4:62582378-62582397 | Msa1169530:three_prime_UTR | 60.0% |
| ACGCATGACAGAGCCCGCTC+CGG | - | chr7_4:62580997-62581016 | None:intergenic | 65.0% | |
| !! | TGCTGCAGGGTGCTGTTCGG+TGG | + | chr7_4:62582578-62582597 | Msa1169530:three_prime_UTR | 65.0% |
| !! | GCTGCAGGGTGCTGTTCGGT+GGG | + | chr7_4:62582579-62582598 | Msa1169530:three_prime_UTR | 65.0% |
| ! | TGTTCGGTGGGAGGCTCTCC+AGG | + | chr7_4:62582591-62582610 | Msa1169530:three_prime_UTR | 65.0% |
| AGGCTCTCCAGGCTTGCGTG+CGG | + | chr7_4:62582602-62582621 | Msa1169530:three_prime_UTR | 65.0% | |
| AGCAAAGCCGCACGCAAGCC+TGG | - | chr7_4:62582612-62582631 | None:intergenic | 65.0% | |
| CGCATGACAGAGCCCGCTCC+GGG | - | chr7_4:62580996-62581015 | None:intergenic | 70.0% | |
| GACGGCGCTGCTGCTGCTAC+CGG | - | chr7_4:62581581-62581600 | None:intergenic | 70.0% | |
| !! | GCAGGGTGCTGTTCGGTGGG+AGG | + | chr7_4:62582582-62582601 | Msa1169530:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 62579179 | 62582706 | 62579179 | ID=Msa1169530;Name=Msa1169530 |
| chr7_4 | mRNA | 62579179 | 62582706 | 62579179 | ID=Msa1169530-mRNA-1;Parent=Msa1169530;Name=Msa1169530-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0.5|0.5|0|1|2|749|169 |
| chr7_4 | exon | 62579179 | 62579183 | 62579179 | ID=Msa1169530-mRNA-1:exon:19835;Parent=Msa1169530-mRNA-1 |
| chr7_4 | exon | 62581453 | 62582706 | 62581453 | ID=Msa1169530-mRNA-1:exon:19836;Parent=Msa1169530-mRNA-1 |
| chr7_4 | CDS | 62579179 | 62579183 | 62579179 | ID=Msa1169530-mRNA-1:cds;Parent=Msa1169530-mRNA-1 |
| chr7_4 | CDS | 62581453 | 62581957 | 62581453 | ID=Msa1169530-mRNA-1:cds;Parent=Msa1169530-mRNA-1 |
| chr7_4 | three_prime_UTR | 62581958 | 62582706 | 62581958 | ID=Msa1169530-mRNA-1:three_prime_utr;Parent=Msa1169530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
