Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370110 | XP_003601098.1 | 98.338 | 361 | 6 | 0 | 1 | 361 | 1 | 361 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370110 | sp|Q9SL92|HCS1_ARATH | 68.103 | 348 | 104 | 4 | 18 | 360 | 22 | 367 | 1.64e-175 | 495 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370110 | G7J3L5 | 98.338 | 361 | 6 | 0 | 1 | 361 | 1 | 361 | 0.0 | 740 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa0370110 | 0.812696 | 3.723918e-51 | -8.615850e-47 |
| Msa0017510 | Msa0370110 | 0.809000 | 2.348477e-50 | -8.615850e-47 |
| Msa0040450 | Msa0370110 | 0.810809 | 9.582089e-51 | -8.615850e-47 |
| Msa0110970 | Msa0370110 | 0.819010 | 1.453507e-52 | -8.615850e-47 |
| Msa0116770 | Msa0370110 | 0.807056 | 6.089391e-50 | -8.615850e-47 |
| Msa0124340 | Msa0370110 | 0.806962 | 6.376448e-50 | -8.615850e-47 |
| Msa0140390 | Msa0370110 | 0.804837 | 1.783234e-49 | -8.615850e-47 |
| Msa0157290 | Msa0370110 | 0.808881 | 2.490313e-50 | -8.615850e-47 |
| Msa0165220 | Msa0370110 | 0.810167 | 1.318682e-50 | -8.615850e-47 |
| Msa0196130 | Msa0370110 | -0.802156 | 6.413485e-49 | -8.615850e-47 |
| Msa0215320 | Msa0370110 | -0.800829 | 1.199191e-48 | -8.615850e-47 |
| Msa0220580 | Msa0370110 | 0.812423 | 4.272098e-51 | -8.615850e-47 |
| Msa0220740 | Msa0370110 | 0.807701 | 4.444053e-50 | -8.615850e-47 |
| Msa0223410 | Msa0370110 | -0.805153 | 1.531449e-49 | -8.615850e-47 |
| Msa0370110 | Msa0410500 | 0.811427 | 7.041122e-51 | -8.615850e-47 |
| Msa0370110 | Msa0423040 | 0.801556 | 8.515528e-49 | -8.615850e-47 |
| Msa0370110 | Msa0432770 | 0.809274 | 2.051930e-50 | -8.615850e-47 |
| Msa0370110 | Msa0443260 | 0.816240 | 6.125038e-52 | -8.615850e-47 |
| Msa0370110 | Msa0469160 | 0.811788 | 5.876759e-51 | -8.615850e-47 |
| Msa0370110 | Msa0480000 | 0.817009 | 4.116959e-52 | -8.615850e-47 |
| Msa0370110 | Msa0480980 | 0.818562 | 1.837611e-52 | -8.615850e-47 |
| Msa0370110 | Msa0484780 | 0.812388 | 4.347545e-51 | -8.615850e-47 |
| Msa0370110 | Msa0497780 | 0.801227 | 9.946173e-49 | -8.615850e-47 |
| Msa0370110 | Msa0503060 | 0.806196 | 9.250612e-50 | -8.615850e-47 |
| Msa0370110 | Msa0509900 | 0.903363 | 3.747699e-79 | -8.615850e-47 |
| Msa0370110 | Msa0512870 | 0.821109 | 4.808949e-53 | -8.615850e-47 |
| Msa0370110 | Msa0519000 | 0.802460 | 5.552511e-49 | -8.615850e-47 |
| Msa0370110 | Msa0533070 | 0.832863 | 7.414465e-56 | -8.615850e-47 |
| Msa0370110 | Msa0547140 | 0.811242 | 7.720047e-51 | -8.615850e-47 |
| Msa0370110 | Msa0562440 | 0.805921 | 1.057148e-49 | -8.615850e-47 |
| Msa0370110 | Msa0581760 | 0.822320 | 2.523405e-53 | -8.615850e-47 |
| Msa0370110 | Msa0585230 | 0.803903 | 2.792043e-49 | -8.615850e-47 |
| Msa0370110 | Msa0593650 | 0.800012 | 1.759467e-48 | -8.615850e-47 |
| Msa0370110 | Msa0601850 | 0.811781 | 5.897567e-51 | -8.615850e-47 |
| Msa0370110 | Msa0621590 | 0.815616 | 8.440593e-52 | -8.615850e-47 |
| Msa0370110 | Msa0631200 | 0.800241 | 1.580653e-48 | -8.615850e-47 |
| Msa0370110 | Msa0649980 | 0.807667 | 4.519582e-50 | -8.615850e-47 |
| Msa0370110 | Msa0653510 | 0.814812 | 1.273238e-51 | -8.615850e-47 |
| Msa0370110 | Msa0669440 | 0.826809 | 2.212313e-54 | -8.615850e-47 |
| Msa0370110 | Msa0692230 | 0.801385 | 9.230053e-49 | -8.615850e-47 |
| Msa0370110 | Msa0711790 | 0.828076 | 1.099068e-54 | -8.615850e-47 |
| Msa0370110 | Msa0756630 | -0.821798 | 3.333278e-53 | -8.615850e-47 |
| Msa0370110 | Msa0767300 | 0.806498 | 7.988459e-50 | -8.615850e-47 |
| Msa0370110 | Msa0802470 | -0.811381 | 7.202567e-51 | -8.615850e-47 |
| Msa0370110 | Msa0830530 | 0.829312 | 5.524550e-55 | -8.615850e-47 |
| Msa0370110 | Msa0844240 | 0.838710 | 2.446423e-57 | -8.615850e-47 |
| Msa0370110 | Msa0844570 | 0.807113 | 5.923353e-50 | -8.615850e-47 |
| Msa0370110 | Msa0850960 | 0.825169 | 5.426718e-54 | -8.615850e-47 |
| Msa0370110 | Msa0861530 | 0.806506 | 7.958208e-50 | -8.615850e-47 |
| Msa0370110 | Msa0880140 | 0.809936 | 1.478635e-50 | -8.615850e-47 |
| Msa0370110 | Msa0891040 | 0.811720 | 6.080816e-51 | -8.615850e-47 |
| Msa0370110 | Msa0907950 | 0.817700 | 2.878482e-52 | -8.615850e-47 |
| Msa0370110 | Msa0907960 | 0.826633 | 2.437042e-54 | -8.615850e-47 |
| Msa0370110 | Msa0922410 | 0.814859 | 1.243003e-51 | -8.615850e-47 |
| Msa0370110 | Msa0932780 | -0.813270 | 2.786056e-51 | -8.615850e-47 |
| Msa0370110 | Msa0947660 | 0.807457 | 5.008993e-50 | -8.615850e-47 |
| Msa0370110 | Msa1014540 | 0.812843 | 3.456405e-51 | -8.615850e-47 |
| Msa0370110 | Msa1030970 | 0.808600 | 2.860496e-50 | -8.615850e-47 |
| Msa0370110 | Msa1035300 | 0.801536 | 8.595051e-49 | -8.615850e-47 |
| Msa0370110 | Msa1040120 | 0.801156 | 1.028555e-48 | -8.615850e-47 |
| Msa0370110 | Msa1065610 | 0.801996 | 6.918055e-49 | -8.615850e-47 |
| Msa0370110 | Msa1075220 | -0.833734 | 4.498387e-56 | -8.615850e-47 |
| Msa0370110 | Msa1082500 | 0.810869 | 9.300591e-51 | -8.615850e-47 |
| Msa0370110 | Msa1085300 | 0.806690 | 7.278018e-50 | -8.615850e-47 |
| Msa0370110 | Msa1085920 | 0.804687 | 1.916491e-49 | -8.615850e-47 |
| Msa0370110 | Msa1090260 | 0.813459 | 2.532587e-51 | -8.615850e-47 |
| Msa0370110 | Msa1097800 | 0.807986 | 3.865977e-50 | -8.615850e-47 |
| Msa0370110 | Msa1111110 | 0.804094 | 2.547535e-49 | -8.615850e-47 |
| Msa0370110 | Msa1111180 | 0.800282 | 1.550850e-48 | -8.615850e-47 |
| Msa0370110 | Msa1116130 | -0.827010 | 1.981109e-54 | -8.615850e-47 |
| Msa0370110 | Msa1118330 | 0.806615 | 7.547787e-50 | -8.615850e-47 |
| Msa0370110 | Msa1127650 | 0.800739 | 1.251552e-48 | -8.615850e-47 |
| Msa0370110 | Msa1162550 | -0.812657 | 3.796876e-51 | -8.615850e-47 |
| Msa0370110 | Msa1168160 | 0.807150 | 5.818024e-50 | -8.615850e-47 |
| Msa0370110 | Msa1179940 | 0.810882 | 9.238718e-51 | -8.615850e-47 |
| Msa0370110 | Msa1179970 | 0.806136 | 9.525735e-50 | -8.615850e-47 |
| Msa0370110 | Msa1214480 | 0.816787 | 4.618602e-52 | -8.615850e-47 |
| Msa0370110 | Msa1222970 | 0.814075 | 1.853112e-51 | -8.615850e-47 |
| Msa0370110 | Msa1229600 | 0.806173 | 9.352851e-50 | -8.615850e-47 |
| Msa0370110 | Msa1233890 | 0.802597 | 5.201190e-49 | -8.615850e-47 |
| Msa0370110 | Msa1238930 | 0.802501 | 5.444321e-49 | -8.615850e-47 |
| Msa0370110 | Msa1242220 | 0.821401 | 4.117912e-53 | -8.615850e-47 |
| Msa0370110 | Msa1242230 | 0.823110 | 1.652652e-53 | -8.615850e-47 |
| Msa0370110 | Msa1242240 | 0.836762 | 7.738224e-57 | -8.615850e-47 |
| Msa0370110 | Msa1252140 | 0.804476 | 2.121518e-49 | -8.615850e-47 |
| Msa0370110 | Msa1264020 | 0.825187 | 5.375020e-54 | -8.615850e-47 |
| Msa0370110 | Msa1283840 | 0.842282 | 2.844814e-58 | -8.615850e-47 |
| Msa0370110 | Msa1283860 | 0.817132 | 3.863339e-52 | -8.615850e-47 |
| Msa0370110 | Msa1284260 | 0.834231 | 3.378631e-56 | -8.615850e-47 |
| Msa0370110 | Msa1286610 | 0.814050 | 1.877065e-51 | -8.615850e-47 |
| Msa0370110 | Msa1287460 | 0.831885 | 1.294874e-55 | -8.615850e-47 |
| Msa0370110 | Msa1291660 | 0.803522 | 3.348665e-49 | -8.615850e-47 |
| Msa0370110 | Msa1292770 | 0.808205 | 3.471673e-50 | -8.615850e-47 |
| Msa0370110 | Msa1310210 | 0.826743 | 2.294623e-54 | -8.615850e-47 |
| Msa0370110 | Msa1320740 | 0.829349 | 5.411412e-55 | -8.615850e-47 |
| Msa0370110 | Msa1322860 | 0.821150 | 4.705444e-53 | -8.615850e-47 |
| Msa0370110 | Msa1322890 | 0.823458 | 1.370302e-53 | -8.615850e-47 |
| Msa0370110 | Msa1327050 | 0.813431 | 2.568083e-51 | -8.615850e-47 |
| Msa0370110 | Msa1343070 | 0.805756 | 1.144726e-49 | -8.615850e-47 |
| Msa0370110 | Msa1348490 | 0.801314 | 9.544686e-49 | -8.615850e-47 |
| Msa0370110 | Msa1359040 | 0.805725 | 1.162138e-49 | -8.615850e-47 |
| Msa0370110 | Msa1360060 | 0.809697 | 1.664414e-50 | -8.615850e-47 |
| Msa0370110 | Msa1367080 | 0.819406 | 1.181004e-52 | -8.615850e-47 |
| Msa0370110 | Msa1372760 | 0.825233 | 5.242188e-54 | -8.615850e-47 |
| Msa0370110 | Msa1378760 | 0.832111 | 1.138640e-55 | -8.615850e-47 |
| Msa0370110 | Msa1393410 | 0.814462 | 1.522029e-51 | -8.615850e-47 |
| Msa0370110 | Msa1395900 | 0.819321 | 1.235059e-52 | -8.615850e-47 |
| Msa0370110 | Msa1395910 | 0.827991 | 1.152177e-54 | -8.615850e-47 |
| Msa0370110 | Msa1402730 | 0.892512 | 1.483115e-74 | -8.615850e-47 |
| Msa0370110 | Msa1415640 | 0.811297 | 7.513724e-51 | -8.615850e-47 |
| Msa0370110 | Msa1416150 | 0.812414 | 4.291053e-51 | -8.615850e-47 |
| Msa0370110 | Msa1426000 | 0.802076 | 6.659066e-49 | -8.615850e-47 |
| Msa0370110 | Msa1429150 | 0.819002 | 1.459544e-52 | -8.615850e-47 |
| Msa0370110 | Msa1435420 | 0.813053 | 3.109905e-51 | -8.615850e-47 |
| Msa0370110 | Msa1438970 | 0.811463 | 6.913674e-51 | -8.615850e-47 |
| Msa0370110 | Msa1451620 | -0.819444 | 1.157591e-52 | -8.615850e-47 |
| Msa0243710 | Msa0370110 | 0.800302 | 1.536272e-48 | -8.615850e-47 |
| Msa0258760 | Msa0370110 | 0.816072 | 6.677822e-52 | -8.615850e-47 |
| Msa0265380 | Msa0370110 | 0.803330 | 3.671160e-49 | -8.615850e-47 |
| Msa0272690 | Msa0370110 | 0.801001 | 1.106109e-48 | -8.615850e-47 |
| Msa0282390 | Msa0370110 | 0.806327 | 8.679304e-50 | -8.615850e-47 |
| Msa0287650 | Msa0370110 | 0.810033 | 1.409529e-50 | -8.615850e-47 |
| Msa0310750 | Msa0370110 | 0.808783 | 2.613830e-50 | -8.615850e-47 |
| Msa0317510 | Msa0370110 | 0.805970 | 1.032335e-49 | -8.615850e-47 |
| Msa0323080 | Msa0370110 | 0.807088 | 5.995345e-50 | -8.615850e-47 |
| Msa0362780 | Msa0370110 | 0.835157 | 1.975555e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370110 | MtrunA17_Chr3g0115071 | 98.338 | 361 | 6 | 0 | 1 | 361 | 1 | 361 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0370110 | AT2G25710.1 | 68.103 | 348 | 104 | 4 | 18 | 360 | 22 | 367 | 1.67e-176 | 495 |
| Msa0370110 | AT2G25710.2 | 68.103 | 348 | 104 | 4 | 18 | 360 | 22 | 367 | 1.67e-176 | 495 |
| Msa0370110 | AT2G25710.5 | 71.037 | 328 | 93 | 2 | 34 | 360 | 3 | 329 | 2.47e-175 | 490 |
| Msa0370110 | AT2G25710.4 | 71.037 | 328 | 93 | 2 | 34 | 360 | 3 | 329 | 2.47e-175 | 490 |
| Msa0370110 | AT1G37150.2 | 70.679 | 324 | 93 | 2 | 38 | 360 | 7 | 329 | 3.95e-172 | 482 |
| Msa0370110 | AT1G37150.4 | 68.662 | 284 | 78 | 1 | 88 | 360 | 3 | 286 | 3.36e-147 | 417 |
| Msa0370110 | AT1G37150.9 | 66.894 | 293 | 95 | 2 | 38 | 329 | 7 | 298 | 8.39e-145 | 414 |
| Msa0370110 | AT1G37150.3 | 67.708 | 288 | 91 | 2 | 38 | 324 | 7 | 293 | 3.08e-144 | 410 |
| Msa0370110 | AT1G37150.8 | 67.708 | 288 | 91 | 2 | 38 | 324 | 7 | 293 | 3.08e-144 | 410 |
| Msa0370110 | AT1G37150.7 | 67.708 | 288 | 91 | 2 | 38 | 324 | 7 | 293 | 3.08e-144 | 410 |
| Msa0370110 | AT1G37150.5 | 67.832 | 286 | 90 | 2 | 38 | 322 | 7 | 291 | 5.44e-144 | 409 |
| Msa0370110 | AT1G37150.6 | 67.832 | 286 | 90 | 2 | 38 | 322 | 7 | 291 | 5.44e-144 | 409 |
| Msa0370110 | AT2G25710.3 | 64.808 | 287 | 94 | 4 | 18 | 299 | 22 | 306 | 5.30e-136 | 390 |
| Msa0370110 | AT2G25710.8 | 64.808 | 287 | 94 | 4 | 18 | 299 | 22 | 306 | 5.30e-136 | 390 |
| Msa0370110 | AT2G25710.7 | 64.103 | 273 | 91 | 4 | 18 | 285 | 22 | 292 | 2.70e-125 | 362 |
| Msa0370110 | AT2G25710.6 | 64.103 | 273 | 91 | 4 | 18 | 285 | 22 | 292 | 2.70e-125 | 362 |
| Msa0370110 | AT1G37150.1 | 71.287 | 202 | 58 | 0 | 123 | 324 | 9 | 210 | 9.04e-110 | 320 |
Find 89 sgRNAs with CRISPR-Local
Find 498 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTTAGAACTGTATTTA+AGG | 0.111945 | 3_1:-67581726 | None:intergenic |
| TGCGATTCTCGCTCTTCTTC+TGG | 0.179601 | 3_1:+67578013 | Msa0370110:five_prime_UTR |
| GAACATCTTCTCTTTGAAAT+TGG | 0.211376 | 3_1:-67581766 | None:intergenic |
| TCTCTTTCTACCAATCAATT+TGG | 0.239071 | 3_1:+67580276 | Msa0370110:CDS |
| AATTCATGAATGAACTAAAT+TGG | 0.279539 | 3_1:-67580254 | None:intergenic |
| CGAACATGCGGTAACGATTC+AGG | 0.287803 | 3_1:+67584660 | Msa0370110:CDS |
| TCAGAGAAGAAGAGGTGAAT+TGG | 0.291045 | 3_1:-67577931 | None:intergenic |
| AGGGAGCTTGAGAGTGTTAT+TGG | 0.294498 | 3_1:-67580163 | None:intergenic |
| TCAAACCTCTTCCCTTGTTC+TGG | 0.304902 | 3_1:-67580594 | None:intergenic |
| CCGTTTAAGTACAGATCATT+TGG | 0.323737 | 3_1:-67581427 | None:intergenic |
| AGTTCAGTATGTTGTTTCCT+TGG | 0.354644 | 3_1:+67580793 | Msa0370110:CDS |
| GAACTCTGAATGTAAAATAA+TGG | 0.359620 | 3_1:-67580202 | None:intergenic |
| ATGGATAGTTCTTTCTTGTC+AGG | 0.365223 | 3_1:-67580183 | None:intergenic |
| CAGGGTGGAGCTCACACATT+TGG | 0.389032 | 3_1:-67585019 | None:intergenic |
| ACTGTATTTAAGGATGTTGT+TGG | 0.393939 | 3_1:-67581716 | None:intergenic |
| ATTTCAAAGAGAAGATGTTC+TGG | 0.407060 | 3_1:+67581769 | Msa0370110:CDS |
| AGCTGTGGATTGCAGTTTGT+TGG | 0.408229 | 3_1:+67580089 | Msa0370110:intron |
| TTCCATTACCTATTACCATC+AGG | 0.410856 | 3_1:-67585038 | None:intergenic |
| CCAAATGATCTGTACTTAAA+CGG | 0.410986 | 3_1:+67581427 | Msa0370110:CDS |
| AGCTCCACCCTGATGGTAAT+AGG | 0.416462 | 3_1:+67585030 | Msa0370110:CDS |
| AATTTGGCAGGCTTCTCATA+TGG | 0.421581 | 3_1:+67580292 | Msa0370110:CDS |
| TACTTAAACGGATTTAAAGT+TGG | 0.432774 | 3_1:+67581439 | Msa0370110:CDS |
| TTGTAGGGTTTGACGTCCTC+GGG | 0.435328 | 3_1:+67584969 | Msa0370110:intron |
| TTTGTAGGGTTTGACGTCCT+CGG | 0.435494 | 3_1:+67584968 | Msa0370110:intron |
| AAATCAATGAGGTCACATTT+CGG | 0.436292 | 3_1:-67577990 | Msa0370120:CDS |
| GACGTCCTCGGGATATTTGT+TGG | 0.437033 | 3_1:+67584980 | Msa0370110:CDS |
| GAAAACATCAGGCAACCTAA+TGG | 0.441676 | 3_1:-67580731 | None:intergenic |
| CAGGTCGGTCAAAGAATGCC+TGG | 0.453946 | 3_1:+67580702 | Msa0370110:intron |
| GGCTATCACAGAGGCAATCA+AGG | 0.464240 | 3_1:+67580814 | Msa0370110:CDS |
| TCTTGTAATATAGTTCCTCT+AGG | 0.468024 | 3_1:-67584276 | None:intergenic |
| GCAGAGTAAAAGAAAACATC+AGG | 0.469791 | 3_1:-67580742 | None:intergenic |
| AATGCCTGGGAGTCTCCATT+AGG | 0.471596 | 3_1:+67580716 | Msa0370110:CDS |
| GAGAAGCCTGCCAAATTGAT+TGG | 0.473011 | 3_1:-67580286 | None:intergenic |
| TTTCTACCAATCAATTTGGC+AGG | 0.476100 | 3_1:+67580280 | Msa0370110:CDS |
| AGTGAGAATCAGAGAAGAAG+AGG | 0.477000 | 3_1:-67577939 | None:intergenic |
| GAAACAACATACTGAACTAA+AGG | 0.493234 | 3_1:-67580788 | None:intergenic |
| CATGAATGAACTAAATTGGA+AGG | 0.495238 | 3_1:-67580250 | None:intergenic |
| CTTGTAATATAGTTCCTCTA+GGG | 0.500499 | 3_1:-67584275 | None:intergenic |
| CTTCTTTGATTTATATGTAG+AGG | 0.504393 | 3_1:-67581476 | None:intergenic |
| AATACACACTGGAAGGTTGA+TGG | 0.504856 | 3_1:+67579765 | Msa0370110:exon |
| TACCTTAGGAATCGCAAAAG+AGG | 0.505471 | 3_1:-67578060 | Msa0370120:intron |
| GTTTAGTTAATCATTTGTAA+AGG | 0.505712 | 3_1:+67585616 | Msa0370110:three_prime_UTR |
| TTTACTCTGCAAATGGAGGA+TGG | 0.511964 | 3_1:+67580755 | Msa0370110:CDS |
| CTCTGCAAATGGAGGATGGA+CGG | 0.514061 | 3_1:+67580759 | Msa0370110:CDS |
| TAACTAAACAATCATGAGCT+TGG | 0.522783 | 3_1:-67585602 | None:intergenic |
| TGGATAGTTCTTTCTTGTCA+GGG | 0.530693 | 3_1:-67580182 | None:intergenic |
| CCAACACATACTGTACCAAC+CGG | 0.533546 | 3_1:-67580565 | None:intergenic |
| TTAAACGGATTTAAAGTTGG+AGG | 0.536654 | 3_1:+67581442 | Msa0370110:CDS |
| AAGAAGTTCAATATCAGTGC+AGG | 0.537210 | 3_1:+67581493 | Msa0370110:CDS |
| TCCATTACCTATTACCATCA+GGG | 0.541073 | 3_1:-67585037 | None:intergenic |
| TGCAGTTTGTTGGTTCTATG+TGG | 0.543232 | 3_1:+67580099 | Msa0370110:CDS |
| TCTGCAAATGGAGGATGGAC+GGG | 0.547695 | 3_1:+67580760 | Msa0370110:CDS |
| TCGGGATATTTGTTGGCAGT+CGG | 0.549135 | 3_1:+67584987 | Msa0370110:CDS |
| ATTACAAGACATGGTTGCAC+AGG | 0.556223 | 3_1:+67584290 | Msa0370110:CDS |
| TATACACTCATGGCATCCTC+AGG | 0.556833 | 3_1:+67579865 | Msa0370110:CDS |
| TGAGTGTATATGTATAAAGA+TGG | 0.560836 | 3_1:-67579852 | None:intergenic |
| TAATCATTTGTAAAGGAGTG+TGG | 0.565262 | 3_1:+67585623 | Msa0370110:three_prime_UTR |
| GCAACCTAATGGAGACTCCC+AGG | 0.571631 | 3_1:-67580720 | None:intergenic |
| TCTTTATACATATACACTCA+TGG | 0.584917 | 3_1:+67579855 | Msa0370110:CDS |
| GTTGTAAACCCTCCTTGTGG+TGG | 0.586071 | 3_1:-67579827 | None:intergenic |
| GTTCTAAGAGAATTGTCTGT+GGG | 0.590225 | 3_1:+67581737 | Msa0370110:CDS |
| CGTTGTTATTAGCCACCACA+AGG | 0.591906 | 3_1:+67579815 | Msa0370110:CDS |
| GATATCCAGAACAAGGGAAG+AGG | 0.594894 | 3_1:+67580589 | Msa0370110:CDS |
| TGTTGGTGATATCCAGAACA+AGG | 0.598168 | 3_1:+67580582 | Msa0370110:CDS |
| GCATTGATGTTAAAATCAAG+TGG | 0.601093 | 3_1:+67581404 | Msa0370110:CDS |
| GTTATTAGCCACCACAAGGA+GGG | 0.602791 | 3_1:+67579819 | Msa0370110:CDS |
| ATATGTTGCCTGACCAGACA+AGG | 0.602815 | 3_1:-67585525 | None:intergenic |
| AGGTCGGTCAAAGAATGCCT+GGG | 0.612004 | 3_1:+67580703 | Msa0370110:intron |
| TACACAGCTCATGTCACAAG+AGG | 0.612533 | 3_1:+67585351 | Msa0370110:three_prime_UTR |
| CCGGTTGGTACAGTATGTGT+TGG | 0.612660 | 3_1:+67580565 | Msa0370110:CDS |
| TCATGTGTCGAAGTTAACTC+AGG | 0.633045 | 3_1:-67580318 | None:intergenic |
| ATGTGTGAGCTCCACCCTGA+TGG | 0.635556 | 3_1:+67585023 | Msa0370110:CDS |
| GATTGCCTCTGTGATAGCCA+AGG | 0.635755 | 3_1:-67580810 | None:intergenic |
| AGGAACTATATTACAAGACA+TGG | 0.642353 | 3_1:+67584281 | Msa0370110:CDS |
| TTGAAGCTAGCTCACATGAA+CGG | 0.644249 | 3_1:+67577965 | Msa0370110:five_prime_UTR |
| GTTAGACAATACACACTGGA+AGG | 0.645097 | 3_1:+67579758 | Msa0370110:five_prime_UTR |
| TCATTTGTAAAGGAGTGTGG+TGG | 0.661393 | 3_1:+67585626 | Msa0370110:three_prime_UTR |
| TGTTATTAGCCACCACAAGG+AGG | 0.667643 | 3_1:+67579818 | Msa0370110:CDS |
| AGTTCTAAGAGAATTGTCTG+TGG | 0.675294 | 3_1:+67581736 | Msa0370110:CDS |
| TGCAGGATTTCAAACCCTAG+AGG | 0.679588 | 3_1:+67584261 | Msa0370110:intron |
| CGAGAATCGCAAAATCAATG+AGG | 0.690223 | 3_1:-67578001 | Msa0370120:CDS |
| ATTACCTATTACCATCAGGG+TGG | 0.691674 | 3_1:-67585034 | None:intergenic |
| GACTGCCAACAAATATCCCG+AGG | 0.701770 | 3_1:-67584985 | None:intergenic |
| TGTTTCCTTGGCTATCACAG+AGG | 0.702795 | 3_1:+67580805 | Msa0370110:CDS |
| GTTGGTGATATCCAGAACAA+GGG | 0.711490 | 3_1:+67580583 | Msa0370110:CDS |
| GGACAAAGTAGTCGAACATG+CGG | 0.723999 | 3_1:+67584648 | Msa0370110:CDS |
| ATAGGTTAGACAATACACAC+TGG | 0.737877 | 3_1:+67579754 | Msa0370110:intron |
| GTAGTTGTAAACCCTCCTTG+TGG | 0.780824 | 3_1:-67579830 | None:intergenic |
| TATTGTACAAGAAAAGAACG+AGG | 0.782276 | 3_1:+67584627 | Msa0370110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATCATTGATTTTTATTTTT+GGG | + | chr3_1:67578128-67578147 | Msa0370110:intron | 10.0% |
| !!! | TTTTATTTGATTTTTGTTTT+TGG | + | chr3_1:67578156-67578175 | Msa0370110:intron | 10.0% |
| !! | TAATGAAATGATATTAAAAA+AGG | + | chr3_1:67579292-67579311 | Msa0370110:intron | 10.0% |
| !!! | GAATAAAAAATTCAAAATTT+TGG | + | chr3_1:67579342-67579361 | Msa0370110:intron | 10.0% |
| !! | AATATGTTTATTACAATTAT+AGG | + | chr3_1:67579736-67579755 | Msa0370110:intron | 10.0% |
| !!! | AGGTAAATAAAATTTTTTTT+TGG | - | chr3_1:67580475-67580494 | None:intergenic | 10.0% |
| !! | ACTTAAAATATAACTTAAAA+GGG | - | chr3_1:67580649-67580668 | None:intergenic | 10.0% |
| !! | AACTTAAAATATAACTTAAA+AGG | - | chr3_1:67580650-67580669 | None:intergenic | 10.0% |
| !!! | AATTTATTTTAATGTCATTT+TGG | + | chr3_1:67581633-67581652 | Msa0370110:intron | 10.0% |
| !!! | TGTTTTTAGTTAAATATTTA+TGG | + | chr3_1:67584102-67584121 | Msa0370110:intron | 10.0% |
| !!! | TAAGGTATAAATTAGTTTAT+GGG | + | chr3_1:67578076-67578095 | Msa0370110:intron | 15.0% |
| !!! | GTATCATTGATTTTTATTTT+TGG | + | chr3_1:67578127-67578146 | Msa0370110:intron | 15.0% |
| !! | AGAAAATTCATTCAAATTTA+AGG | - | chr3_1:67578377-67578396 | Msa0370120:intron | 15.0% |
| !! | TAACTTGAAAAAATAATTGT+TGG | - | chr3_1:67578589-67578608 | Msa0370120:intron | 15.0% |
| !! | TAAACAATCAAATAGATATA+TGG | - | chr3_1:67579262-67579281 | None:intergenic | 15.0% |
| !! | AAAACAATTAAATTCGTAAA+AGG | + | chr3_1:67579320-67579339 | Msa0370110:intron | 15.0% |
| !!! | AAAATTCAAAATTTTGGTTT+CGG | + | chr3_1:67579348-67579367 | Msa0370110:intron | 15.0% |
| !! | TCTATAATGAATTAAATTCA+TGG | + | chr3_1:67580002-67580021 | Msa0370110:intron | 15.0% |
| !! | AGTATTAAATTTAACACTTA+AGG | + | chr3_1:67580920-67580939 | Msa0370110:intron | 15.0% |
| !! | AAAAAGAAAAGAATTAAACT+TGG | - | chr3_1:67582009-67582028 | None:intergenic | 15.0% |
| !! | TTAGTTAGTTAGTTAAAAAA+TGG | + | chr3_1:67583227-67583246 | Msa0370110:intron | 15.0% |
| !! | TAGTTAGTTAGTTAAAAAAT+GGG | + | chr3_1:67583228-67583247 | Msa0370110:intron | 15.0% |
| !!! | AGTCTTATTTTTTCAATTAT+TGG | + | chr3_1:67583558-67583577 | Msa0370110:intron | 15.0% |
| !! | ACATATTTAGAGAATTAAAA+TGG | - | chr3_1:67583652-67583671 | None:intergenic | 15.0% |
| !!! | AAATTTTCAAATGAATAACA+AGG | - | chr3_1:67583833-67583852 | None:intergenic | 15.0% |
| !! | GTTATAGAAATTAAAAAAGT+TGG | + | chr3_1:67583860-67583879 | Msa0370110:intron | 15.0% |
| !!! | AATTAAAAGCAATTAGTTTT+GGG | - | chr3_1:67583963-67583982 | None:intergenic | 15.0% |
| !!! | TAATTAAAAGCAATTAGTTT+TGG | - | chr3_1:67583964-67583983 | None:intergenic | 15.0% |
| !! | TTTCAATTTATATCATAATC+AGG | - | chr3_1:67585252-67585271 | None:intergenic | 15.0% |
| !!! | TATTTTCTACAAATTAACTA+AGG | + | chr3_1:67585388-67585407 | Msa0370110:three_prime_UTR | 15.0% |
| !!! | TTATATTATTTTCTCTTGAT+AGG | + | chr3_1:67585578-67585597 | Msa0370110:three_prime_UTR | 15.0% |
| !! | CATAAACTAATTTATACCTT+AGG | - | chr3_1:67578077-67578096 | Msa0370120:intron | 20.0% |
| !!! | CTAAGGTATAAATTAGTTTA+TGG | + | chr3_1:67578075-67578094 | Msa0370110:intron | 20.0% |
| !!! | TGTTTTTTGAGTTTTGTTTT+TGG | + | chr3_1:67578104-67578123 | Msa0370110:intron | 20.0% |
| !!! | GTTTTTTGAGTTTTGTTTTT+GGG | + | chr3_1:67578105-67578124 | Msa0370110:intron | 20.0% |
| !!! | ATTTTGTTTGATTTTTGTCT+GGG | + | chr3_1:67578184-67578203 | Msa0370110:intron | 20.0% |
| !!! | ATTAGTGTTTCTATATTGTT+TGG | + | chr3_1:67578336-67578355 | Msa0370110:intron | 20.0% |
| !! | ATAAATTTGAAGAATCCATA+AGG | - | chr3_1:67578555-67578574 | Msa0370120:intron | 20.0% |
| !! | AAAAAATAATTGTTGGAACT+TGG | - | chr3_1:67578582-67578601 | Msa0370120:intron | 20.0% |
| !! | ATTCAGTTTATTCCATTTAT+TGG | - | chr3_1:67579042-67579061 | None:intergenic | 20.0% |
| !!! | AATTGTCATTTTTTTAGTGA+TGG | + | chr3_1:67579620-67579639 | Msa0370110:intron | 20.0% |
| !! | CACAATATTCTCATAAAAAA+AGG | - | chr3_1:67579673-67579692 | None:intergenic | 20.0% |
| !! | AATTCATGAATGAACTAAAT+TGG | - | chr3_1:67580257-67580276 | None:intergenic | 20.0% |
| !! | AAAAAGATCTTAAACATACT+GGG | - | chr3_1:67580507-67580526 | None:intergenic | 20.0% |
| !! | AAAAAAGATCTTAAACATAC+TGG | - | chr3_1:67580508-67580527 | None:intergenic | 20.0% |
| !! | TAATATTCTGGTAAAAGTAA+TGG | + | chr3_1:67580987-67581006 | Msa0370110:intron | 20.0% |
| !! | TAGCTAATAGTATAATACAT+GGG | - | chr3_1:67581576-67581595 | None:intergenic | 20.0% |
| !! | TTAGCTAATAGTATAATACA+TGG | - | chr3_1:67581577-67581596 | None:intergenic | 20.0% |
| !!! | CTTCTCAAATTTGTTAAAAA+AGG | - | chr3_1:67581798-67581817 | None:intergenic | 20.0% |
| !!! | TTTGATCTATTTTTGAATCA+AGG | + | chr3_1:67581821-67581840 | Msa0370110:CDS | 20.0% |
| !!! | AGTATAGTTTGTATTTTGTT+AGG | + | chr3_1:67582244-67582263 | Msa0370110:intron | 20.0% |
| !! | AGTTAGTTAGTTAAAAAATG+GGG | + | chr3_1:67583229-67583248 | Msa0370110:intron | 20.0% |
| !!! | AATTTTACCTTCCAATATTT+TGG | + | chr3_1:67583383-67583402 | Msa0370110:intron | 20.0% |
| !!! | ATTTTACCTTCCAATATTTT+GGG | + | chr3_1:67583384-67583403 | Msa0370110:intron | 20.0% |
| !!! | GAACCATTTTAAATATTTGA+GGG | - | chr3_1:67583735-67583754 | None:intergenic | 20.0% |
| !!! | AGAACCATTTTAAATATTTG+AGG | - | chr3_1:67583736-67583755 | None:intergenic | 20.0% |
| !!! | TATACACATAAAAGTTTTAC+AGG | + | chr3_1:67583925-67583944 | Msa0370110:intron | 20.0% |
| !!! | TTTTTGGTAAATGTCAATTA+TGG | - | chr3_1:67584057-67584076 | None:intergenic | 20.0% |
| !! | TAACTAAAAACATAACACTT+TGG | - | chr3_1:67584094-67584113 | None:intergenic | 20.0% |
| !! | TTTAAGAAAATATGGATGTT+CGG | - | chr3_1:67584138-67584157 | None:intergenic | 20.0% |
| !! | TAATATTGTGAAAACATGTT+GGG | - | chr3_1:67584416-67584435 | None:intergenic | 20.0% |
| !! | TTAATATTGTGAAAACATGT+TGG | - | chr3_1:67584417-67584436 | None:intergenic | 20.0% |
| !! | ACAATATTAATTACTGAACT+CGG | + | chr3_1:67584427-67584446 | Msa0370110:intron | 20.0% |
| !!! | TTCAGATAATTTTGTAAATC+AGG | - | chr3_1:67584707-67584726 | None:intergenic | 20.0% |
| !!! | GATAATTGCTTTTATTTGTA+GGG | + | chr3_1:67584954-67584973 | Msa0370110:intron | 20.0% |
| !! | AGCAATATAGCTAAAAATTT+AGG | + | chr3_1:67585414-67585433 | Msa0370110:three_prime_UTR | 20.0% |
| !! | GTTTAGTTAATCATTTGTAA+AGG | + | chr3_1:67585616-67585635 | Msa0370110:three_prime_UTR | 20.0% |
| !!! | GATTTTGTTTGATTTTTGTC+TGG | + | chr3_1:67578183-67578202 | Msa0370110:intron | 25.0% |
| !!! | TTTTGTTTCTGGTATGATTT+TGG | + | chr3_1:67578215-67578234 | Msa0370110:intron | 25.0% |
| !!! | TTTGTTTCTGGTATGATTTT+GGG | + | chr3_1:67578216-67578235 | Msa0370110:intron | 25.0% |
| !! | TTGTTTGGACTTGTTTAATT+AGG | + | chr3_1:67578351-67578370 | Msa0370110:intron | 25.0% |
| !!! | ATCTTTTGATTACTTGTTTC+AGG | - | chr3_1:67578651-67578670 | Msa0370120:intron | 25.0% |
| ! | TGATAAACTTGAGCTATAAA+TGG | - | chr3_1:67578998-67579017 | None:intergenic | 25.0% |
| ! | AATGGAATAAACTGAATTGT+CGG | + | chr3_1:67579045-67579064 | Msa0370110:intron | 25.0% |
| ! | TTGGTTAATAGATATGCAAA+TGG | + | chr3_1:67579377-67579396 | Msa0370110:intron | 25.0% |
| !!! | CAAATTTGTTAGAGAATGAA+AGG | - | chr3_1:67579522-67579541 | None:intergenic | 25.0% |
| ! | TGAGTGTATATGTATAAAGA+TGG | - | chr3_1:67579855-67579874 | None:intergenic | 25.0% |
| ! | TCTTTATACATATACACTCA+TGG | + | chr3_1:67579855-67579874 | Msa0370110:CDS | 25.0% |
| ! | ATTCATGGTTATTGAACAAT+TGG | + | chr3_1:67580017-67580036 | Msa0370110:intron | 25.0% |
| ! | GAACTCTGAATGTAAAATAA+TGG | - | chr3_1:67580205-67580224 | None:intergenic | 25.0% |
| !! | ATTTTTCACGATCTGATTAT+GGG | - | chr3_1:67580410-67580429 | None:intergenic | 25.0% |
| !! | AATTTTTCACGATCTGATTA+TGG | - | chr3_1:67580411-67580430 | None:intergenic | 25.0% |
| ! | TGTGTACAAGTTTAATATTC+TGG | + | chr3_1:67580975-67580994 | Msa0370110:intron | 25.0% |
| ! | TATCTACTAAAATGCAAACT+TGG | + | chr3_1:67581090-67581109 | Msa0370110:intron | 25.0% |
| ! | AAATTGTTACAAAAATGCAC+AGG | - | chr3_1:67581365-67581384 | None:intergenic | 25.0% |
| !!! | TTGATTTTAACATCAATGCA+CGG | - | chr3_1:67581403-67581422 | None:intergenic | 25.0% |
| !! | TACTTAAACGGATTTAAAGT+TGG | + | chr3_1:67581439-67581458 | Msa0370110:CDS | 25.0% |
| !! | CTTCTTTGATTTATATGTAG+AGG | - | chr3_1:67581479-67581498 | None:intergenic | 25.0% |
| ! | TAATAGTATAATACATGGGA+TGG | - | chr3_1:67581572-67581591 | None:intergenic | 25.0% |
| !!! | ATTTTAATGTCATTTTGGTG+AGG | + | chr3_1:67581638-67581657 | Msa0370110:intron | 25.0% |
| ! | TTCTCTTAGAACTGTATTTA+AGG | - | chr3_1:67581729-67581748 | None:intergenic | 25.0% |
| !! | AAATGTATATTTTGCGGAAA+GGG | + | chr3_1:67581875-67581894 | Msa0370110:intron | 25.0% |
| ! | GGTAAAAGGGATTTATAATA+GGG | + | chr3_1:67581896-67581915 | Msa0370110:intron | 25.0% |
| ! | AAAGAATTAAACTTGGCATA+GGG | - | chr3_1:67582002-67582021 | None:intergenic | 25.0% |
| ! | AAAAGAATTAAACTTGGCAT+AGG | - | chr3_1:67582003-67582022 | None:intergenic | 25.0% |
| ! | AAAAGTAGTTAGGAAAGTTA+GGG | + | chr3_1:67582188-67582207 | Msa0370110:intron | 25.0% |
| !! | AGTTTGTATTTTGTTAGGAT+AGG | + | chr3_1:67582249-67582268 | Msa0370110:intron | 25.0% |
| !! | GTTTGTATTTTGTTAGGATA+GGG | + | chr3_1:67582250-67582269 | Msa0370110:intron | 25.0% |
| !! | GATTGGTTGGTTAAATAAAT+GGG | + | chr3_1:67582341-67582360 | Msa0370110:intron | 25.0% |
| !! | ATTGGTTGGTTAAATAAATG+GGG | + | chr3_1:67582342-67582361 | Msa0370110:intron | 25.0% |
| ! | AGTTATTGAATGAATCATAG+AGG | - | chr3_1:67582467-67582486 | None:intergenic | 25.0% |
| ! | ATTAAATCCAAACATAAGCT+TGG | - | chr3_1:67582951-67582970 | None:intergenic | 25.0% |
| ! | AAGCTTATGTTTGGATTTAA+TGG | + | chr3_1:67582950-67582969 | Msa0370110:intron | 25.0% |
| ! | AGCTTATGTTTGGATTTAAT+GGG | + | chr3_1:67582951-67582970 | Msa0370110:intron | 25.0% |
| ! | CTCTTTGAATTCCATAAATT+TGG | - | chr3_1:67582983-67583002 | None:intergenic | 25.0% |
| ! | ATTCTTTCTACTATATGTTG+AGG | - | chr3_1:67583034-67583053 | None:intergenic | 25.0% |
| !!! | AAACTATTTTTGCACCTATA+AGG | - | chr3_1:67583155-67583174 | None:intergenic | 25.0% |
| ! | TTATAGGTGCAAAAATAGTT+TGG | + | chr3_1:67583154-67583173 | Msa0370110:intron | 25.0% |
| ! | TATAGGTGCAAAAATAGTTT+GGG | + | chr3_1:67583155-67583174 | Msa0370110:intron | 25.0% |
| ! | TAAAAAATGGGGAGAAATAT+AGG | + | chr3_1:67583240-67583259 | Msa0370110:intron | 25.0% |
| ! | AAAAAATGGGGAGAAATATA+GGG | + | chr3_1:67583241-67583260 | Msa0370110:intron | 25.0% |
| ! | ACTACTAAAAGAATAACAAG+GGG | - | chr3_1:67583541-67583560 | None:intergenic | 25.0% |
| ! | GACTACTAAAAGAATAACAA+GGG | - | chr3_1:67583542-67583561 | None:intergenic | 25.0% |
| ! | AGACTACTAAAAGAATAACA+AGG | - | chr3_1:67583543-67583562 | None:intergenic | 25.0% |
| ! | TTGCCCTCAAATATTTAAAA+TGG | + | chr3_1:67583729-67583748 | Msa0370110:intron | 25.0% |
| ! | AGACTTTCAGAAAAGTTTAA+AGG | - | chr3_1:67583888-67583907 | None:intergenic | 25.0% |
| ! | CATAGTTAATTTCCGATATA+GGG | + | chr3_1:67583996-67584015 | Msa0370110:intron | 25.0% |
| ! | ATAGTTAATTTCCGATATAG+GGG | + | chr3_1:67583997-67584016 | Msa0370110:intron | 25.0% |
| !!! | GGTTGTTTACTTCTTATTTT+TGG | - | chr3_1:67584073-67584092 | None:intergenic | 25.0% |
| ! | TTAAGAAAATATGGATGTTC+GGG | - | chr3_1:67584137-67584156 | None:intergenic | 25.0% |
| ! | ATAGCAGGTTTAAGAAAATA+TGG | - | chr3_1:67584146-67584165 | None:intergenic | 25.0% |
| ! | TAACCTATTATGTTAAATGC+AGG | + | chr3_1:67584244-67584263 | Msa0370110:intron | 25.0% |
| ! | AATCCTGCATTTAACATAAT+AGG | - | chr3_1:67584250-67584269 | None:intergenic | 25.0% |
| !! | AATAAAAGCACATGATAAAG+AGG | - | chr3_1:67584350-67584369 | None:intergenic | 25.0% |
| !! | TACTTTTACTTCAATCATGA+AGG | + | chr3_1:67584374-67584393 | Msa0370110:intron | 25.0% |
| ! | ATCGATATAAACATTGAATG+TGG | - | chr3_1:67584881-67584900 | None:intergenic | 25.0% |
| !!! | CGATAATTGCTTTTATTTGT+AGG | + | chr3_1:67584953-67584972 | Msa0370110:intron | 25.0% |
| ! | AAAAAACGTGATAAGTTTGA+GGG | - | chr3_1:67585505-67585524 | None:intergenic | 25.0% |
| AAATCAATGAGGTCACATTT+CGG | - | chr3_1:67577993-67578012 | Msa0370120:CDS | 30.0% | |
| ATATAGCATATGTTGTGCTA+AGG | + | chr3_1:67578280-67578299 | Msa0370110:intron | 30.0% | |
| ! | GCTGCTAAAGTTCAATTTTA+AGG | - | chr3_1:67578414-67578433 | Msa0370120:intron | 30.0% |
| AATCCATAAGGTTACTGTTA+TGG | - | chr3_1:67578543-67578562 | Msa0370120:intron | 30.0% | |
| ! | GATTTCTACTCAGTTTTCAT+TGG | + | chr3_1:67578776-67578795 | Msa0370110:intron | 30.0% |
| !! | TGGAAGAGTATTGTGTAAAA+TGG | - | chr3_1:67578927-67578946 | None:intergenic | 30.0% |
| ! | TTTTACACAATACTCTTCCA+AGG | + | chr3_1:67578927-67578946 | Msa0370110:intron | 30.0% |
| CTCATCAATTTGCCAATAAA+TGG | + | chr3_1:67579027-67579046 | Msa0370110:intron | 30.0% | |
| !!! | TCAAAATTTTGGTTTCGGTT+CGG | + | chr3_1:67579353-67579372 | Msa0370110:intron | 30.0% |
| AGAGCAAATACAAATACCTA+GGG | - | chr3_1:67579498-67579517 | None:intergenic | 30.0% | |
| AAGAGCAAATACAAATACCT+AGG | - | chr3_1:67579499-67579518 | None:intergenic | 30.0% | |
| TCTAACAAATTTGATGCCAT+TGG | + | chr3_1:67579529-67579548 | Msa0370110:intron | 30.0% | |
| TTATGAAAGACACAATCCAT+CGG | - | chr3_1:67579568-67579587 | None:intergenic | 30.0% | |
| CATGAATGAACTAAATTGGA+AGG | - | chr3_1:67580253-67580272 | None:intergenic | 30.0% | |
| TCTCTTTCTACCAATCAATT+TGG | + | chr3_1:67580276-67580295 | Msa0370110:CDS | 30.0% | |
| AAAACACGAAGAACAGAAAA+AGG | - | chr3_1:67580368-67580387 | None:intergenic | 30.0% | |
| !! | TCGTGTTTTAGATTATGCAT+TGG | + | chr3_1:67580379-67580398 | Msa0370110:intron | 30.0% |
| !! | GTTTTAGATTATGCATTGGT+TGG | + | chr3_1:67580383-67580402 | Msa0370110:intron | 30.0% |
| ATCTTAAGCACAAGAAAGTT+TGG | - | chr3_1:67580443-67580462 | None:intergenic | 30.0% | |
| ! | GTTTTCTTTTACTCTGCAAA+TGG | + | chr3_1:67580748-67580767 | Msa0370110:CDS | 30.0% |
| GAAACAACATACTGAACTAA+AGG | - | chr3_1:67580791-67580810 | None:intergenic | 30.0% | |
| !!! | AGCACTTGGTTTTAAATTAC+TGG | + | chr3_1:67580857-67580876 | Msa0370110:intron | 30.0% |
| !!! | ATGGTGCTTTTTTGTGAATA+TGG | + | chr3_1:67581006-67581025 | Msa0370110:intron | 30.0% |
| TACTAAAATGCAAACTTGGT+TGG | + | chr3_1:67581094-67581113 | Msa0370110:intron | 30.0% | |
| ATTTGTCGTTCATGCTTAAT+AGG | - | chr3_1:67581167-67581186 | None:intergenic | 30.0% | |
| TATTAAGCATGAACGACAAA+TGG | + | chr3_1:67581166-67581185 | Msa0370110:intron | 30.0% | |
| ! | TTCAAAAGCTGAATGGTTTT+TGG | + | chr3_1:67581238-67581257 | Msa0370110:intron | 30.0% |
| ATAAATGCTTGCTTTGTGTT+TGG | + | chr3_1:67581277-67581296 | Msa0370110:intron | 30.0% | |
| TAAGATACTGTGACAAATCA+TGG | - | chr3_1:67581323-67581342 | None:intergenic | 30.0% | |
| ! | TTTGTAACAATTTTCATCCC+AGG | + | chr3_1:67581372-67581391 | Msa0370110:intron | 30.0% |
| ! | TTGTAACAATTTTCATCCCA+GGG | + | chr3_1:67581373-67581392 | Msa0370110:intron | 30.0% |
| ! | GCATTGATGTTAAAATCAAG+TGG | + | chr3_1:67581404-67581423 | Msa0370110:CDS | 30.0% |
| CCAAATGATCTGTACTTAAA+CGG | + | chr3_1:67581427-67581446 | Msa0370110:CDS | 30.0% | |
| ! | TTAAACGGATTTAAAGTTGG+AGG | + | chr3_1:67581442-67581461 | Msa0370110:CDS | 30.0% |
| GTGAACAGGATTTAATATAC+TGG | - | chr3_1:67581601-67581620 | None:intergenic | 30.0% | |
| AACAAATTCCATGATTTCAC+AGG | + | chr3_1:67581665-67581684 | Msa0370110:intron | 30.0% | |
| ACTGTATTTAAGGATGTTGT+TGG | - | chr3_1:67581719-67581738 | None:intergenic | 30.0% | |
| !! | GAACATCTTCTCTTTGAAAT+TGG | - | chr3_1:67581769-67581788 | None:intergenic | 30.0% |
| ATTTCAAAGAGAAGATGTTC+TGG | + | chr3_1:67581769-67581788 | Msa0370110:CDS | 30.0% | |
| ! | CGAACCAAATGTATATTTTG+CGG | + | chr3_1:67581869-67581888 | Msa0370110:intron | 30.0% |
| CTTTCCGCAAAATATACATT+TGG | - | chr3_1:67581876-67581895 | None:intergenic | 30.0% | |
| ! | CAAATGTATATTTTGCGGAA+AGG | + | chr3_1:67581874-67581893 | Msa0370110:intron | 30.0% |
| GGGTAAAAGGGATTTATAAT+AGG | + | chr3_1:67581895-67581914 | Msa0370110:intron | 30.0% | |
| ! | AAATTGCTTGCTAATTTACC+AGG | + | chr3_1:67581950-67581969 | Msa0370110:intron | 30.0% |
| AAGAATTAAACTTGGCATAG+GGG | - | chr3_1:67582001-67582020 | None:intergenic | 30.0% | |
| ATAACAACTAGGGTTTATAG+AGG | - | chr3_1:67582153-67582172 | None:intergenic | 30.0% | |
| CAAAAGTAGTTAGGAAAGTT+AGG | + | chr3_1:67582187-67582206 | Msa0370110:intron | 30.0% | |
| !! | GGATTGGTTGGTTAAATAAA+TGG | + | chr3_1:67582340-67582359 | Msa0370110:intron | 30.0% |
| ! | TTGGTTGGTTAAATAAATGG+GGG | + | chr3_1:67582343-67582362 | Msa0370110:intron | 30.0% |
| GAATTCCATAAATTTGGACT+TGG | - | chr3_1:67582977-67582996 | None:intergenic | 30.0% | |
| CTATATGTTTGATCACTCAA+TGG | + | chr3_1:67583112-67583131 | Msa0370110:intron | 30.0% | |
| ! | CCTATAAGGTCCAATTTTAA+TGG | - | chr3_1:67583141-67583160 | None:intergenic | 30.0% |
| CCATTAAAATTGGACCTTAT+AGG | + | chr3_1:67583138-67583157 | Msa0370110:intron | 30.0% | |
| AAAAATGGGGAGAAATATAG+GGG | + | chr3_1:67583242-67583261 | Msa0370110:intron | 30.0% | |
| ! | GAAGAATCATTAAGTGGATT+TGG | + | chr3_1:67583267-67583286 | Msa0370110:intron | 30.0% |
| ! | GATTTGGTTGTTGTTATGAA+CGG | + | chr3_1:67583283-67583302 | Msa0370110:intron | 30.0% |
| TTGAATAGATGACTGAGAAT+AGG | - | chr3_1:67583342-67583361 | None:intergenic | 30.0% | |
| TTGTTAAGAGCCCAAAATAT+TGG | - | chr3_1:67583397-67583416 | None:intergenic | 30.0% | |
| AAGAAGAAAAATCACTCACT+TGG | + | chr3_1:67583480-67583499 | Msa0370110:intron | 30.0% | |
| AAAAGAATAACAAGGGGTAA+GGG | - | chr3_1:67583535-67583554 | None:intergenic | 30.0% | |
| TAAAAGAATAACAAGGGGTA+AGG | - | chr3_1:67583536-67583555 | None:intergenic | 30.0% | |
| GGTGACAAAAAAAAAAGAGA+AGG | - | chr3_1:67583584-67583603 | None:intergenic | 30.0% | |
| ATACACTTATGACAAAGCTA+AGG | - | chr3_1:67583681-67583700 | None:intergenic | 30.0% | |
| CCTATATCGGAAATTAACTA+TGG | - | chr3_1:67583998-67584017 | None:intergenic | 30.0% | |
| CCATAGTTAATTTCCGATAT+AGG | + | chr3_1:67583995-67584014 | Msa0370110:intron | 30.0% | |
| AGATGTATACAACATCACAT+TGG | - | chr3_1:67584026-67584045 | None:intergenic | 30.0% | |
| ATCCGACGTTTAAGAAAATT+TGG | + | chr3_1:67584217-67584236 | Msa0370110:intron | 30.0% | |
| ! | CTCCAAATTTTCTTAAACGT+CGG | - | chr3_1:67584222-67584241 | None:intergenic | 30.0% |
| CTTGTAATATAGTTCCTCTA+GGG | - | chr3_1:67584278-67584297 | None:intergenic | 30.0% | |
| TCTTGTAATATAGTTCCTCT+AGG | - | chr3_1:67584279-67584298 | None:intergenic | 30.0% | |
| AGGAACTATATTACAAGACA+TGG | + | chr3_1:67584281-67584300 | Msa0370110:CDS | 30.0% | |
| ATCCTAGTTATGCTTTCATT+TGG | + | chr3_1:67584508-67584527 | Msa0370110:intron | 30.0% | |
| ! | TTCCAAATGAAAGCATAACT+AGG | - | chr3_1:67584513-67584532 | None:intergenic | 30.0% |
| TTATTGCATACTAGTATACG+TGG | + | chr3_1:67584546-67584565 | Msa0370110:intron | 30.0% | |
| TATTGTACAAGAAAAGAACG+AGG | + | chr3_1:67584627-67584646 | Msa0370110:CDS | 30.0% | |
| TACAGCAAATTTCACATCAA+TGG | - | chr3_1:67584747-67584766 | None:intergenic | 30.0% | |
| !!! | TACAGCTTTGACTTTTTCAA+AGG | + | chr3_1:67585296-67585315 | Msa0370110:intron | 30.0% |
| GAAAAAACGTGATAAGTTTG+AGG | - | chr3_1:67585506-67585525 | None:intergenic | 30.0% | |
| TAACTAAACAATCATGAGCT+TGG | - | chr3_1:67585605-67585624 | None:intergenic | 30.0% | |
| TAATCATTTGTAAAGGAGTG+TGG | + | chr3_1:67585623-67585642 | Msa0370110:three_prime_UTR | 30.0% | |
| !! | GGGTATGATGATTTTGTTTC+TGG | + | chr3_1:67578204-67578223 | Msa0370110:intron | 35.0% |
| !! | GTGCTAAGGTTGCTTATTTT+TGG | + | chr3_1:67578294-67578313 | Msa0370110:intron | 35.0% |
| GAACCATAACAGTAACCTTA+TGG | + | chr3_1:67578537-67578556 | Msa0370110:intron | 35.0% | |
| AGTAGAAATCTCAGTGTAAG+AGG | - | chr3_1:67578766-67578785 | Msa0370120:intron | 35.0% | |
| TGAAGCTAGAAAACTATCCT+TGG | - | chr3_1:67578947-67578966 | None:intergenic | 35.0% | |
| !! | TAAACTGAATTGTCGGCTTA+TGG | + | chr3_1:67579052-67579071 | Msa0370110:intron | 35.0% |
| TGTGATCCTCTAATAAGCTA+GGG | + | chr3_1:67579122-67579141 | Msa0370110:intron | 35.0% | |
| ACTGAACCAAAGTTATGGTT+CGG | - | chr3_1:67579407-67579426 | None:intergenic | 35.0% | |
| ! | ACCATAACTTTGGTTCAGTT+CGG | + | chr3_1:67579408-67579427 | Msa0370110:intron | 35.0% |
| ! | GGTTAGTTCCAAACCTTAAA+CGG | + | chr3_1:67579429-67579448 | Msa0370110:intron | 35.0% |
| AAATACAAATACCTAGGGGT+GGG | - | chr3_1:67579493-67579512 | None:intergenic | 35.0% | |
| GAGCAAATACAAATACCTAG+GGG | - | chr3_1:67579497-67579516 | None:intergenic | 35.0% | |
| ATAGGTTAGACAATACACAC+TGG | + | chr3_1:67579754-67579773 | Msa0370110:intron | 35.0% | |
| GTTGTTCAGCTAACAATCTA+TGG | - | chr3_1:67579936-67579955 | None:intergenic | 35.0% | |
| TAGATTGTTAGCTGAACAAC+TGG | + | chr3_1:67579936-67579955 | Msa0370110:intron | 35.0% | |
| AGATTGTTAGCTGAACAACT+GGG | + | chr3_1:67579937-67579956 | Msa0370110:intron | 35.0% | |
| !!! | TCCTCTATTTTTATCAGCTG+TGG | + | chr3_1:67580074-67580093 | Msa0370110:intron | 35.0% |
| TCCACAGCTGATAAAAATAG+AGG | - | chr3_1:67580078-67580097 | None:intergenic | 35.0% | |
| TGGATAGTTCTTTCTTGTCA+GGG | - | chr3_1:67580185-67580204 | None:intergenic | 35.0% | |
| ATGGATAGTTCTTTCTTGTC+AGG | - | chr3_1:67580186-67580205 | None:intergenic | 35.0% | |
| TTTCTACCAATCAATTTGGC+AGG | + | chr3_1:67580280-67580299 | Msa0370110:CDS | 35.0% | |
| ACTTAAAAGGGACAGAATCA+TGG | - | chr3_1:67580637-67580656 | None:intergenic | 35.0% | |
| GCAGAGTAAAAGAAAACATC+AGG | - | chr3_1:67580745-67580764 | None:intergenic | 35.0% | |
| ! | TTCTTTTACTCTGCAAATGG+AGG | + | chr3_1:67580751-67580770 | Msa0370110:CDS | 35.0% |
| !! | AGTTCAGTATGTTGTTTCCT+TGG | + | chr3_1:67580793-67580812 | Msa0370110:CDS | 35.0% |
| GTGACAAAAATGTAAGCACT+TGG | + | chr3_1:67580843-67580862 | Msa0370110:intron | 35.0% | |
| TTTCCCTAACCAAATTCACT+GGG | - | chr3_1:67580898-67580917 | None:intergenic | 35.0% | |
| ! | TGCATACAACTTCACAGTTT+TGG | - | chr3_1:67581032-67581051 | None:intergenic | 35.0% |
| ! | ATGGCAGCAACATTTTTGAA+AGG | + | chr3_1:67581185-67581204 | Msa0370110:intron | 35.0% |
| !! | TGGCAGCAACATTTTTGAAA+GGG | + | chr3_1:67581186-67581205 | Msa0370110:intron | 35.0% |
| AGACAACTCTCATCATCATA+TGG | + | chr3_1:67581212-67581231 | Msa0370110:intron | 35.0% | |
| ATGGAGTTTCAAAAGCTGAA+TGG | + | chr3_1:67581231-67581250 | Msa0370110:intron | 35.0% | |
| CCGTTTAAGTACAGATCATT+TGG | - | chr3_1:67581430-67581449 | None:intergenic | 35.0% | |
| AAGAAGTTCAATATCAGTGC+AGG | + | chr3_1:67581493-67581512 | Msa0370110:CDS | 35.0% | |
| CAATATCAGTGCAGGTAATA+AGG | + | chr3_1:67581501-67581520 | Msa0370110:intron | 35.0% | |
| ! | TGCAGGTAATAAGGTATTCT+TGG | + | chr3_1:67581510-67581529 | Msa0370110:intron | 35.0% |
| TTAAATTCTCTGCAGTGAAC+AGG | - | chr3_1:67581615-67581634 | None:intergenic | 35.0% | |
| TTCCATGATTTCACAGGAAT+AGG | + | chr3_1:67581671-67581690 | Msa0370110:intron | 35.0% | |
| ATCCTATTCCTGTGAAATCA+TGG | - | chr3_1:67581676-67581695 | None:intergenic | 35.0% | |
| !! | AGTTCTAAGAGAATTGTCTG+TGG | + | chr3_1:67581736-67581755 | Msa0370110:CDS | 35.0% |
| !! | GTTCTAAGAGAATTGTCTGT+GGG | + | chr3_1:67581737-67581756 | Msa0370110:CDS | 35.0% |
| ! | TATTTTGCGGAAAGGGTAAA+AGG | + | chr3_1:67581882-67581901 | Msa0370110:intron | 35.0% |
| ! | ATTTTGCGGAAAGGGTAAAA+GGG | + | chr3_1:67581883-67581902 | Msa0370110:intron | 35.0% |
| AGTTGTGCTATGTCTTGTAA+TGG | + | chr3_1:67582031-67582050 | Msa0370110:intron | 35.0% | |
| !! | GCCTTTACTATTGACTTAGA+GGG | + | chr3_1:67582053-67582072 | Msa0370110:intron | 35.0% |
| ACCCTCTAAGTCAATAGTAA+AGG | - | chr3_1:67582057-67582076 | None:intergenic | 35.0% | |
| TTAGGAAAGTTAGGGTAGTT+AGG | + | chr3_1:67582196-67582215 | Msa0370110:intron | 35.0% | |
| TTAACCAACCAATCCCTATA+AGG | - | chr3_1:67582335-67582354 | None:intergenic | 35.0% | |
| ! | TGGTTGGTTAAATAAATGGG+GGG | + | chr3_1:67582344-67582363 | Msa0370110:intron | 35.0% |
| AAATAAATGGGGGGAATGTA+AGG | + | chr3_1:67582353-67582372 | Msa0370110:intron | 35.0% | |
| AATAAATGGGGGGAATGTAA+GGG | + | chr3_1:67582354-67582373 | Msa0370110:intron | 35.0% | |
| GAAGGATCATCATGTGAATT+TGG | + | chr3_1:67582379-67582398 | Msa0370110:intron | 35.0% | |
| ! | TCATCATGTGAATTTGGTGA+TGG | + | chr3_1:67582385-67582404 | Msa0370110:intron | 35.0% |
| AGGAGAAATCCTTTGTACAT+TGG | + | chr3_1:67582412-67582431 | Msa0370110:intron | 35.0% | |
| CAACAGTTTCCAATGTACAA+AGG | - | chr3_1:67582424-67582443 | None:intergenic | 35.0% | |
| CTTTGTACATTGGAAACTGT+TGG | + | chr3_1:67582422-67582441 | Msa0370110:intron | 35.0% | |
| ! | TTCTCTTGTTTCCCAACAAT+TGG | + | chr3_1:67582527-67582546 | Msa0370110:intron | 35.0% |
| AACCTGCCAGATATCTTATT+GGG | + | chr3_1:67582553-67582572 | Msa0370110:intron | 35.0% | |
| ATATCTTATTGGGGGAAGAA+AGG | + | chr3_1:67582563-67582582 | Msa0370110:intron | 35.0% | |
| TATCTTATTGGGGGAAGAAA+GGG | + | chr3_1:67582564-67582583 | Msa0370110:intron | 35.0% | |
| TCCAAAACAGCAACAAAGTA+AGG | + | chr3_1:67582749-67582768 | Msa0370110:intron | 35.0% | |
| !!! | ACCTTACTTTGTTGCTGTTT+TGG | - | chr3_1:67582753-67582772 | None:intergenic | 35.0% |
| !! | AATCTTCCCACTTTGCTTTT+GGG | - | chr3_1:67582823-67582842 | None:intergenic | 35.0% |
| ! | AAATCTTCCCACTTTGCTTT+TGG | - | chr3_1:67582824-67582843 | None:intergenic | 35.0% |
| AAAAGCAAAGTGGGAAGATT+TGG | + | chr3_1:67582823-67582842 | Msa0370110:intron | 35.0% | |
| CTAACTGTAGACGAATTGTT+GGG | - | chr3_1:67583009-67583028 | None:intergenic | 35.0% | |
| ACTAACTGTAGACGAATTGT+TGG | - | chr3_1:67583010-67583029 | None:intergenic | 35.0% | |
| TCAATGGCAGCCATTAAAAT+TGG | + | chr3_1:67583128-67583147 | Msa0370110:intron | 35.0% | |
| ! | TGTTTGTTAAGACTTCAGAG+TGG | + | chr3_1:67583192-67583211 | Msa0370110:intron | 35.0% |
| AAAATGGGGAGAAATATAGG+GGG | + | chr3_1:67583243-67583262 | Msa0370110:intron | 35.0% | |
| TAAGAGCCCAAAATATTGGA+AGG | - | chr3_1:67583393-67583412 | None:intergenic | 35.0% | |
| TCACCTAAGAACTTCAAAGA+GGG | + | chr3_1:67583599-67583618 | Msa0370110:intron | 35.0% | |
| GTTCTTGAAGTGACATCAAA+TGG | + | chr3_1:67583751-67583770 | Msa0370110:intron | 35.0% | |
| !! | CTCATTAGCTTTGTTGTTCT+AGG | - | chr3_1:67583779-67583798 | None:intergenic | 35.0% |
| CAATCAGCACAAAATATAGC+AGG | - | chr3_1:67584161-67584180 | None:intergenic | 35.0% | |
| !! | CTGCTATATTTTGTGCTGAT+TGG | + | chr3_1:67584159-67584178 | Msa0370110:intron | 35.0% |
| CAATCATGAAGGAAACGATT+CGG | + | chr3_1:67584385-67584404 | Msa0370110:intron | 35.0% | |
| ACATTCAAAATGTCATGCAG+TGG | + | chr3_1:67584595-67584614 | Msa0370110:intron | 35.0% | |
| TGTCAACTTGACATCATTAC+TGG | + | chr3_1:67584915-67584934 | Msa0370110:intron | 35.0% | |
| TCCATTACCTATTACCATCA+GGG | - | chr3_1:67585040-67585059 | None:intergenic | 35.0% | |
| TTCCATTACCTATTACCATC+AGG | - | chr3_1:67585041-67585060 | None:intergenic | 35.0% | |
| !!! | TTTTCAAAGGACTAGTCAGA+AGG | + | chr3_1:67585309-67585328 | Msa0370110:CDS | 35.0% |
| !!! | TATCACGTTTTTTCCTTGTC+TGG | + | chr3_1:67585512-67585531 | Msa0370110:three_prime_UTR | 35.0% |
| TCAGAGAAGAAGAGGTGAAT+TGG | - | chr3_1:67577934-67577953 | None:intergenic | 40.0% | |
| AGTGAGAATCAGAGAAGAAG+AGG | - | chr3_1:67577942-67577961 | None:intergenic | 40.0% | |
| TTGAAGCTAGCTCACATGAA+CGG | + | chr3_1:67577965-67577984 | Msa0370110:five_prime_UTR | 40.0% | |
| CGAGAATCGCAAAATCAATG+AGG | - | chr3_1:67578004-67578023 | Msa0370120:CDS | 40.0% | |
| TACCTTAGGAATCGCAAAAG+AGG | - | chr3_1:67578063-67578082 | Msa0370120:intron | 40.0% | |
| ! | TTTGAGACAACAGAAGCAAG+TGG | + | chr3_1:67578481-67578500 | Msa0370110:intron | 40.0% |
| GAAATCTCAGTGTAAGAGGA+AGG | - | chr3_1:67578762-67578781 | Msa0370120:intron | 40.0% | |
| ! | TACCTTAGAAGCTCTAGCTT+TGG | + | chr3_1:67578802-67578821 | Msa0370110:intron | 40.0% |
| !! | ACCTTAGAAGCTCTAGCTTT+GGG | + | chr3_1:67578803-67578822 | Msa0370110:intron | 40.0% |
| GAGTTACCAGATTTCTCAGT+TGG | + | chr3_1:67578881-67578900 | Msa0370110:intron | 40.0% | |
| GAGAAACCAACTGAGAAATC+TGG | - | chr3_1:67578890-67578909 | Msa0370120:CDS | 40.0% | |
| GTGTGATCCTCTAATAAGCT+AGG | + | chr3_1:67579121-67579140 | Msa0370110:intron | 40.0% | |
| ATAGCTCCCTAGCTTATTAG+AGG | - | chr3_1:67579131-67579150 | None:intergenic | 40.0% | |
| !!! | ATTTTGGTTTCGGTTCGGTT+TGG | + | chr3_1:67579358-67579377 | Msa0370110:intron | 40.0% |
| ACCGAACTGAACCAAAGTTA+TGG | - | chr3_1:67579412-67579431 | None:intergenic | 40.0% | |
| GTTCCAAACCTTAAACGGTT+CGG | + | chr3_1:67579434-67579453 | Msa0370110:intron | 40.0% | |
| !! | AAACCTTAAACGGTTCGGTT+CGG | + | chr3_1:67579439-67579458 | Msa0370110:intron | 40.0% |
| CAAATACAAATACCTAGGGG+TGG | - | chr3_1:67579494-67579513 | None:intergenic | 40.0% | |
| ! | ATTGTGACACCTTTTCCACT+TGG | + | chr3_1:67579687-67579706 | Msa0370110:intron | 40.0% |
| AAATTCCAACAGAGTCCAAG+TGG | - | chr3_1:67579705-67579724 | None:intergenic | 40.0% | |
| GTTAGACAATACACACTGGA+AGG | + | chr3_1:67579758-67579777 | Msa0370110:five_prime_UTR | 40.0% | |
| AATACACACTGGAAGGTTGA+TGG | + | chr3_1:67579765-67579784 | Msa0370110:exon | 40.0% | |
| ! | AAGATAGCGCTGAAAGTAAC+AGG | - | chr3_1:67579902-67579921 | None:intergenic | 40.0% |
| !! | TGCAGTTTGTTGGTTCTATG+TGG | + | chr3_1:67580099-67580118 | Msa0370110:CDS | 40.0% |
| AATTTGGCAGGCTTCTCATA+TGG | + | chr3_1:67580292-67580311 | Msa0370110:CDS | 40.0% | |
| TCATGTGTCGAAGTTAACTC+AGG | - | chr3_1:67580321-67580340 | None:intergenic | 40.0% | |
| AACATACTGGGAATGACAAC+AGG | - | chr3_1:67580495-67580514 | None:intergenic | 40.0% | |
| !! | TGTTGGTGATATCCAGAACA+AGG | + | chr3_1:67580582-67580601 | Msa0370110:CDS | 40.0% |
| !! | GTTGGTGATATCCAGAACAA+GGG | + | chr3_1:67580583-67580602 | Msa0370110:CDS | 40.0% |
| AACAAGGGAAGAGGTTTGAT+CGG | + | chr3_1:67580598-67580617 | Msa0370110:intron | 40.0% | |
| GAAAACATCAGGCAACCTAA+TGG | - | chr3_1:67580734-67580753 | None:intergenic | 40.0% | |
| TTTACTCTGCAAATGGAGGA+TGG | + | chr3_1:67580755-67580774 | Msa0370110:CDS | 40.0% | |
| TCTCCCAGTGAATTTGGTTA+GGG | + | chr3_1:67580892-67580911 | Msa0370110:intron | 40.0% | |
| CTTTCCCTAACCAAATTCAC+TGG | - | chr3_1:67580899-67580918 | None:intergenic | 40.0% | |
| ACTTAAGGCTGTATGCTTTC+AGG | + | chr3_1:67580935-67580954 | Msa0370110:intron | 40.0% | |
| CTGTGACAAATCATGGAAGT+TGG | - | chr3_1:67581316-67581335 | None:intergenic | 40.0% | |
| ACATGGGATGGAAATGCAAT+TGG | - | chr3_1:67581560-67581579 | None:intergenic | 40.0% | |
| ATATTGCACTAGTGCATCCT+GGG | - | chr3_1:67581922-67581941 | None:intergenic | 40.0% | |
| TATATTGCACTAGTGCATCC+TGG | - | chr3_1:67581923-67581942 | None:intergenic | 40.0% | |
| ! | GGATAATGAAGTTTTACGCC+TGG | - | chr3_1:67581971-67581990 | None:intergenic | 40.0% |
| !! | GGCCTTTACTATTGACTTAG+AGG | + | chr3_1:67582052-67582071 | Msa0370110:intron | 40.0% |
| CAATACTTTACCCAGTATGC+AGG | - | chr3_1:67582120-67582139 | None:intergenic | 40.0% | |
| AACCCTAGTTGTTATGACTG+AGG | + | chr3_1:67582158-67582177 | Msa0370110:intron | 40.0% | |
| CTCCTCAGTCATAACAACTA+GGG | - | chr3_1:67582163-67582182 | None:intergenic | 40.0% | |
| AGGAGGATGCAAAAGTAGTT+AGG | + | chr3_1:67582178-67582197 | Msa0370110:intron | 40.0% | |
| AGTTAAAGAGCGGAGTGATA+AGG | - | chr3_1:67582288-67582307 | None:intergenic | 40.0% | |
| ATAAATGGGGGGAATGTAAG+GGG | + | chr3_1:67582355-67582374 | Msa0370110:intron | 40.0% | |
| !! | GTGAATTTGGTGATGGTGAA+AGG | + | chr3_1:67582392-67582411 | Msa0370110:intron | 40.0% |
| CAATAAGATATCTGGCAGGT+TGG | - | chr3_1:67582554-67582573 | None:intergenic | 40.0% | |
| CAACCTGCCAGATATCTTAT+TGG | + | chr3_1:67582552-67582571 | Msa0370110:intron | 40.0% | |
| ACCTGCCAGATATCTTATTG+GGG | + | chr3_1:67582554-67582573 | Msa0370110:intron | 40.0% | |
| TCTTCCCCCAATAAGATATC+TGG | - | chr3_1:67582562-67582581 | None:intergenic | 40.0% | |
| ! | AACTTCAGGGTGTTCTTGAA+AGG | + | chr3_1:67582589-67582608 | Msa0370110:intron | 40.0% |
| ! | ACTTCAGGGTGTTCTTGAAA+GGG | + | chr3_1:67582590-67582609 | Msa0370110:intron | 40.0% |
| !! | TTGAAAGGGAGCACTGATAA+TGG | + | chr3_1:67582604-67582623 | Msa0370110:intron | 40.0% |
| !! | TGAAAGGGAGCACTGATAAT+GGG | + | chr3_1:67582605-67582624 | Msa0370110:intron | 40.0% |
| TGGCTGATAATTCAGTACCA+CGG | + | chr3_1:67582693-67582712 | Msa0370110:intron | 40.0% | |
| TTAAAGAGACAGCAAGAGCT+AGG | + | chr3_1:67582772-67582791 | Msa0370110:intron | 40.0% | |
| TAAAGAGACAGCAAGAGCTA+GGG | + | chr3_1:67582773-67582792 | Msa0370110:intron | 40.0% | |
| AAGTGGGAAGATTTGGCATT+TGG | + | chr3_1:67582830-67582849 | Msa0370110:intron | 40.0% | |
| TCTGAAGACAGACAGTTAGA+TGG | + | chr3_1:67582918-67582937 | Msa0370110:intron | 40.0% | |
| CTGAAGACAGACAGTTAGAT+GGG | + | chr3_1:67582919-67582938 | Msa0370110:intron | 40.0% | |
| GAAACAGCCAAGCTTATGTT+TGG | + | chr3_1:67582941-67582960 | Msa0370110:intron | 40.0% | |
| ATGGGCCAAGTCCAAATTTA+TGG | + | chr3_1:67582969-67582988 | Msa0370110:intron | 40.0% | |
| TGTTAAGACTTCAGAGTGGT+TGG | + | chr3_1:67583196-67583215 | Msa0370110:intron | 40.0% | |
| TCTGTCTTGAATACGAACCA+AGG | - | chr3_1:67583459-67583478 | None:intergenic | 40.0% | |
| GTCACCTAAGAACTTCAAAG+AGG | + | chr3_1:67583598-67583617 | Msa0370110:intron | 40.0% | |
| !! | TCTCCCTCTTTGAAGTTCTT+AGG | - | chr3_1:67583605-67583624 | None:intergenic | 40.0% |
| GTTAATTTCCGATATAGGGG+TGG | + | chr3_1:67584000-67584019 | Msa0370110:intron | 40.0% | |
| !! | TTTGTGCTGATTGGTTGTCA+AGG | + | chr3_1:67584168-67584187 | Msa0370110:intron | 40.0% |
| CTTAAACGTCGGATACAGTA+AGG | - | chr3_1:67584211-67584230 | None:intergenic | 40.0% | |
| ATTACAAGACATGGTTGCAC+AGG | + | chr3_1:67584290-67584309 | Msa0370110:CDS | 40.0% | |
| ATTACCTATTACCATCAGGG+TGG | - | chr3_1:67585037-67585056 | None:intergenic | 40.0% | |
| ACCCTGATGGTAATAGGTAA+TGG | + | chr3_1:67585036-67585055 | Msa0370110:intron | 40.0% | |
| ! | TCATTTGTAAAGGAGTGTGG+TGG | + | chr3_1:67585626-67585645 | Msa0370110:three_prime_UTR | 40.0% |
| ! | CACCTCTTTTGCGATTCCTA+AGG | + | chr3_1:67578058-67578077 | Msa0370110:five_prime_UTR | 45.0% |
| TCCCAAAGCTAGAGCTTCTA+AGG | - | chr3_1:67578807-67578826 | Msa0370120:intron | 45.0% | |
| ATCAGGGTAAGTCAAGGAAG+AGG | - | chr3_1:67578855-67578874 | Msa0370120:intron | 45.0% | |
| TCTTCCTTGACTTACCCTGA+TGG | + | chr3_1:67578854-67578873 | Msa0370110:intron | 45.0% | |
| TCAACCATCAGGGTAAGTCA+AGG | - | chr3_1:67578861-67578880 | Msa0370120:intron | 45.0% | |
| CTGGTAACTCTCAACCATCA+GGG | - | chr3_1:67578871-67578890 | Msa0370120:CDS | 45.0% | |
| TCTGGTAACTCTCAACCATC+AGG | - | chr3_1:67578872-67578891 | Msa0370120:CDS | 45.0% | |
| ! | TGGAGATATGCTGCAGCTTT+TGG | + | chr3_1:67579072-67579091 | Msa0370110:intron | 45.0% |
| ! | GGTTAGCCGAACCATAACTT+TGG | + | chr3_1:67579398-67579417 | Msa0370110:intron | 45.0% |
| ! | GAACCGAACCGTTTAAGGTT+TGG | - | chr3_1:67579440-67579459 | None:intergenic | 45.0% |
| AAACCGAACCGAACCGTTTA+AGG | - | chr3_1:67579445-67579464 | None:intergenic | 45.0% | |
| !! | TTAAACGGTTCGGTTCGGTT+TGG | + | chr3_1:67579444-67579463 | Msa0370110:intron | 45.0% |
| CGGTCGGATATTCTATCCAA+TGG | - | chr3_1:67579548-67579567 | None:intergenic | 45.0% | |
| TGGATAGAATATCCGACCGA+TGG | + | chr3_1:67579549-67579568 | Msa0370110:intron | 45.0% | |
| GAAAGACACAATCCATCGGT+CGG | - | chr3_1:67579564-67579583 | None:intergenic | 45.0% | |
| CAACAGAGTCCAAGTGGAAA+AGG | - | chr3_1:67579699-67579718 | None:intergenic | 45.0% | |
| ! | CTTTTCCACTTGGACTCTGT+TGG | + | chr3_1:67579697-67579716 | Msa0370110:intron | 45.0% |
| ! | CGTTGTTATTAGCCACCACA+AGG | + | chr3_1:67579815-67579834 | Msa0370110:CDS | 45.0% |
| TGTTATTAGCCACCACAAGG+AGG | + | chr3_1:67579818-67579837 | Msa0370110:CDS | 45.0% | |
| GTTATTAGCCACCACAAGGA+GGG | + | chr3_1:67579819-67579838 | Msa0370110:CDS | 45.0% | |
| GTAGTTGTAAACCCTCCTTG+TGG | - | chr3_1:67579833-67579852 | None:intergenic | 45.0% | |
| TATACACTCATGGCATCCTC+AGG | + | chr3_1:67579865-67579884 | Msa0370110:CDS | 45.0% | |
| ! | AGCTGTGGATTGCAGTTTGT+TGG | + | chr3_1:67580089-67580108 | Msa0370110:intron | 45.0% |
| !! | AGGGAGCTTGAGAGTGTTAT+TGG | - | chr3_1:67580166-67580185 | None:intergenic | 45.0% |
| GAGAAGCCTGCCAAATTGAT+TGG | - | chr3_1:67580289-67580308 | None:intergenic | 45.0% | |
| ! | CAGCAACTTTTGTGAGCTTC+CGG | + | chr3_1:67580546-67580565 | Msa0370110:intron | 45.0% |
| ! | AACTTTTGTGAGCTTCCGGT+TGG | + | chr3_1:67580550-67580569 | Msa0370110:CDS | 45.0% |
| CCAACACATACTGTACCAAC+CGG | - | chr3_1:67580568-67580587 | None:intergenic | 45.0% | |
| GATATCCAGAACAAGGGAAG+AGG | + | chr3_1:67580589-67580608 | Msa0370110:CDS | 45.0% | |
| TCAAACCTCTTCCCTTGTTC+TGG | - | chr3_1:67580597-67580616 | None:intergenic | 45.0% | |
| TGTTTCCTTGGCTATCACAG+AGG | + | chr3_1:67580805-67580824 | Msa0370110:CDS | 45.0% | |
| TCCTAGTCTCCCAGTGAATT+TGG | + | chr3_1:67580886-67580905 | Msa0370110:intron | 45.0% | |
| ACCAAATTCACTGGGAGACT+AGG | - | chr3_1:67580890-67580909 | None:intergenic | 45.0% | |
| GTCTCCCAGTGAATTTGGTT+AGG | + | chr3_1:67580891-67580910 | Msa0370110:intron | 45.0% | |
| AGGGATTTATAATAGGGCCC+AGG | + | chr3_1:67581902-67581921 | Msa0370110:intron | 45.0% | |
| ACTTGGCATAGGGGAAATAG+AGG | - | chr3_1:67581992-67582011 | None:intergenic | 45.0% | |
| GACTTAGAGGGTGAGACATA+TGG | + | chr3_1:67582065-67582084 | Msa0370110:intron | 45.0% | |
| ! | GACATATGGCTGTTGCCTTT+TGG | + | chr3_1:67582079-67582098 | Msa0370110:intron | 45.0% |
| TCCTTGTCTTTGCGACCAAA+AGG | - | chr3_1:67582097-67582116 | None:intergenic | 45.0% | |
| AAAGACAAGGACCTGCATAC+TGG | + | chr3_1:67582106-67582125 | Msa0370110:intron | 45.0% | |
| AAGACAAGGACCTGCATACT+GGG | + | chr3_1:67582107-67582126 | Msa0370110:intron | 45.0% | |
| CCTCCTCAGTCATAACAACT+AGG | - | chr3_1:67582164-67582183 | None:intergenic | 45.0% | |
| CCTAGTTGTTATGACTGAGG+AGG | + | chr3_1:67582161-67582180 | Msa0370110:intron | 45.0% | |
| ! | CAATCCCTATAAGGTTGGCT+GGG | - | chr3_1:67582326-67582345 | None:intergenic | 45.0% |
| CCAACCAATCCCTATAAGGT+TGG | - | chr3_1:67582331-67582350 | None:intergenic | 45.0% | |
| ! | CCAACCTTATAGGGATTGGT+TGG | + | chr3_1:67582328-67582347 | Msa0370110:intron | 45.0% |
| TAAATGGGGGGAATGTAAGG+GGG | + | chr3_1:67582356-67582375 | Msa0370110:intron | 45.0% | |
| CCTGCCAGATATCTTATTGG+GGG | + | chr3_1:67582555-67582574 | Msa0370110:intron | 45.0% | |
| GGAAGAAAGGGAGAACTTCA+GGG | + | chr3_1:67582576-67582595 | Msa0370110:intron | 45.0% | |
| CAACTTGCAACCTCTGTTGA+GGG | + | chr3_1:67582631-67582650 | Msa0370110:intron | 45.0% | |
| AATTCAGTACCACGGCAATG+AGG | + | chr3_1:67582701-67582720 | Msa0370110:intron | 45.0% | |
| ATTCAGTACCACGGCAATGA+GGG | + | chr3_1:67582702-67582721 | Msa0370110:intron | 45.0% | |
| TAGGGATGAAGTGGAAAGAC+TGG | + | chr3_1:67582791-67582810 | Msa0370110:intron | 45.0% | |
| AGGGATGAAGTGGAAAGACT+GGG | + | chr3_1:67582792-67582811 | Msa0370110:intron | 45.0% | |
| ! | GACTAGCCCAAAAGCAAAGT+GGG | + | chr3_1:67582814-67582833 | Msa0370110:intron | 45.0% |
| !! | ATAATGGGCCAGACACAAAC+TGG | + | chr3_1:67582879-67582898 | Msa0370110:intron | 45.0% |
| ! | CACAAACTGGTCTCTGTCAT+TGG | + | chr3_1:67582892-67582911 | Msa0370110:intron | 45.0% |
| GGGGGAGAAGAATCATTAAG+TGG | + | chr3_1:67583261-67583280 | Msa0370110:intron | 45.0% | |
| TGCAGGATTTCAAACCCTAG+AGG | + | chr3_1:67584261-67584280 | Msa0370110:intron | 45.0% | |
| GGACAAAGTAGTCGAACATG+CGG | + | chr3_1:67584648-67584667 | Msa0370110:CDS | 45.0% | |
| ATGCGGTAACGATTCAGGTA+TGG | + | chr3_1:67584665-67584684 | Msa0370110:intron | 45.0% | |
| TTTGTAGGGTTTGACGTCCT+CGG | + | chr3_1:67584968-67584987 | Msa0370110:intron | 45.0% | |
| ! | TCGGGATATTTGTTGGCAGT+CGG | + | chr3_1:67584987-67585006 | Msa0370110:CDS | 45.0% |
| TACACAGCTCATGTCACAAG+AGG | + | chr3_1:67585351-67585370 | Msa0370110:three_prime_UTR | 45.0% | |
| !!! | CGTTTTTTCCTTGTCTGGTC+AGG | + | chr3_1:67585517-67585536 | Msa0370110:three_prime_UTR | 45.0% |
| ATATGTTGCCTGACCAGACA+AGG | - | chr3_1:67585528-67585547 | None:intergenic | 45.0% | |
| TGCGATTCTCGCTCTTCTTC+TGG | + | chr3_1:67578013-67578032 | Msa0370110:five_prime_UTR | 50.0% | |
| !! | GGGAGTGATCCCACTAGTTT+TGG | + | chr3_1:67578823-67578842 | Msa0370110:intron | 50.0% |
| AGGCTGCTGCCAAAACTAGT+GGG | - | chr3_1:67578835-67578854 | Msa0370120:intron | 50.0% | |
| GTTGTAAACCCTCCTTGTGG+TGG | - | chr3_1:67579830-67579849 | None:intergenic | 50.0% | |
| ACAGGTTGCGATCTAACCTG+AGG | - | chr3_1:67579884-67579903 | None:intergenic | 50.0% | |
| ! | CCGGTTGGTACAGTATGTGT+TGG | + | chr3_1:67580565-67580584 | Msa0370110:CDS | 50.0% |
| ! | CTCTGAGAGCTTAAACTCCC+AGG | + | chr3_1:67580683-67580702 | Msa0370110:intron | 50.0% |
| GAGAGCTTAAACTCCCAGGT+CGG | + | chr3_1:67580687-67580706 | Msa0370110:intron | 50.0% | |
| AGGCATTCTTTGACCGACCT+GGG | - | chr3_1:67580703-67580722 | None:intergenic | 50.0% | |
| AGGTCGGTCAAAGAATGCCT+GGG | + | chr3_1:67580703-67580722 | Msa0370110:intron | 50.0% | |
| AATGCCTGGGAGTCTCCATT+AGG | + | chr3_1:67580716-67580735 | Msa0370110:CDS | 50.0% | |
| CTCTGCAAATGGAGGATGGA+CGG | + | chr3_1:67580759-67580778 | Msa0370110:CDS | 50.0% | |
| TCTGCAAATGGAGGATGGAC+GGG | + | chr3_1:67580760-67580779 | Msa0370110:CDS | 50.0% | |
| GATTGCCTCTGTGATAGCCA+AGG | - | chr3_1:67580813-67580832 | None:intergenic | 50.0% | |
| GGCTATCACAGAGGCAATCA+AGG | + | chr3_1:67580814-67580833 | Msa0370110:CDS | 50.0% | |
| ATCAATGCACGGCAATCCCT+GGG | - | chr3_1:67581392-67581411 | None:intergenic | 50.0% | |
| ! | GCCTTTTGGTCGCAAAGACA+AGG | + | chr3_1:67582093-67582112 | Msa0370110:intron | 50.0% |
| AGAGCGGAGTGATAAGGAGA+GGG | - | chr3_1:67582282-67582301 | None:intergenic | 50.0% | |
| AAGAGCGGAGTGATAAGGAG+AGG | - | chr3_1:67582283-67582302 | None:intergenic | 50.0% | |
| GGAGTGGGAGAGTTAAAGAG+CGG | - | chr3_1:67582298-67582317 | None:intergenic | 50.0% | |
| ! | TATAAGGTTGGCTGGGTGGT+TGG | - | chr3_1:67582319-67582338 | None:intergenic | 50.0% |
| AACCACCCAGCCAACCTTAT+AGG | + | chr3_1:67582318-67582337 | Msa0370110:intron | 50.0% | |
| ACCACCCAGCCAACCTTATA+GGG | + | chr3_1:67582319-67582338 | Msa0370110:intron | 50.0% | |
| CCAATCCCTATAAGGTTGGC+TGG | - | chr3_1:67582327-67582346 | None:intergenic | 50.0% | |
| CCAGCCAACCTTATAGGGAT+TGG | + | chr3_1:67582324-67582343 | Msa0370110:intron | 50.0% | |
| AAATGGGGGGAATGTAAGGG+GGG | + | chr3_1:67582357-67582376 | Msa0370110:intron | 50.0% | |
| ! | GGCAGGTTGGACCAATTGTT+GGG | - | chr3_1:67582541-67582560 | None:intergenic | 50.0% |
| ! | TGGCAGGTTGGACCAATTGT+TGG | - | chr3_1:67582542-67582561 | None:intergenic | 50.0% |
| CCCCCAATAAGATATCTGGC+AGG | - | chr3_1:67582558-67582577 | None:intergenic | 50.0% | |
| GGGAAGAAAGGGAGAACTTC+AGG | + | chr3_1:67582575-67582594 | Msa0370110:intron | 50.0% | |
| GCAACTTGCAACCTCTGTTG+AGG | + | chr3_1:67582630-67582649 | Msa0370110:intron | 50.0% | |
| CTCTGTTGAGGGAGCTGAAA+GGG | + | chr3_1:67582642-67582661 | Msa0370110:intron | 50.0% | |
| TCTGTTGAGGGAGCTGAAAG+GGG | + | chr3_1:67582643-67582662 | Msa0370110:intron | 50.0% | |
| TAACAACCGCAGTGCTCGTA+TGG | + | chr3_1:67582670-67582689 | Msa0370110:intron | 50.0% | |
| TTCAGTACCACGGCAATGAG+GGG | + | chr3_1:67582703-67582722 | Msa0370110:intron | 50.0% | |
| AGCAAGAGCTAGGGATGAAG+TGG | + | chr3_1:67582782-67582801 | Msa0370110:intron | 50.0% | |
| !! | GGACTAGCCCAAAAGCAAAG+TGG | + | chr3_1:67582813-67582832 | Msa0370110:intron | 50.0% |
| GACAGAGACCAGTTTGTGTC+TGG | - | chr3_1:67582890-67582909 | None:intergenic | 50.0% | |
| TGACTGAGAATAGGAGAGCG+AGG | - | chr3_1:67583333-67583352 | None:intergenic | 50.0% | |
| ! | AAGAGCATAGTGCACTGCAC+AGG | + | chr3_1:67583424-67583443 | Msa0370110:intron | 50.0% |
| TGCACAGGCTTTCTGTACCT+TGG | + | chr3_1:67583439-67583458 | Msa0370110:intron | 50.0% | |
| CACATTGGCCACCCCTATAT+CGG | - | chr3_1:67584011-67584030 | None:intergenic | 50.0% | |
| CGAACATGCGGTAACGATTC+AGG | + | chr3_1:67584660-67584679 | Msa0370110:CDS | 50.0% | |
| TTGTAGGGTTTGACGTCCTC+GGG | + | chr3_1:67584969-67584988 | Msa0370110:intron | 50.0% | |
| GACGTCCTCGGGATATTTGT+TGG | + | chr3_1:67584980-67584999 | Msa0370110:CDS | 50.0% | |
| GACTGCCAACAAATATCCCG+AGG | - | chr3_1:67584988-67585007 | None:intergenic | 50.0% | |
| AGCTCCACCCTGATGGTAAT+AGG | + | chr3_1:67585030-67585049 | Msa0370110:CDS | 50.0% | |
| GAGGCTGCTGCCAAAACTAG+TGG | - | chr3_1:67578836-67578855 | Msa0370120:intron | 55.0% | |
| CAAATACCTAGGGGTGGGCA+TGG | - | chr3_1:67579488-67579507 | None:intergenic | 55.0% | |
| CAGGCATTCTTTGACCGACC+TGG | - | chr3_1:67580704-67580723 | None:intergenic | 55.0% | |
| CAGGTCGGTCAAAGAATGCC+TGG | + | chr3_1:67580702-67580721 | Msa0370110:intron | 55.0% | |
| GCAACCTAATGGAGACTCCC+AGG | - | chr3_1:67580723-67580742 | None:intergenic | 55.0% | |
| CATCAATGCACGGCAATCCC+TGG | - | chr3_1:67581393-67581412 | None:intergenic | 55.0% | |
| ! | TCCCTATAAGGTTGGCTGGG+TGG | - | chr3_1:67582323-67582342 | None:intergenic | 55.0% |
| CCTTTCAGCTCCCTCAACAG+AGG | - | chr3_1:67582644-67582663 | None:intergenic | 55.0% | |
| CCTCTGTTGAGGGAGCTGAA+AGG | + | chr3_1:67582641-67582660 | Msa0370110:intron | 55.0% | |
| CATCTTACCCCTCATTGCCG+TGG | - | chr3_1:67582713-67582732 | None:intergenic | 55.0% | |
| CAGGGTGGAGCTCACACATT+TGG | - | chr3_1:67585022-67585041 | None:intergenic | 55.0% | |
| ATGTGTGAGCTCCACCCTGA+TGG | + | chr3_1:67585023-67585042 | Msa0370110:CDS | 55.0% | |
| ACCTAGGGGTGGGCATGGTT+CGG | - | chr3_1:67579483-67579502 | None:intergenic | 60.0% | |
| GTTGGCTGGGTGGTTGGAGT+GGG | - | chr3_1:67582313-67582332 | None:intergenic | 60.0% | |
| CAACCGCAGTGCTCGTATGG+TGG | + | chr3_1:67582673-67582692 | Msa0370110:intron | 60.0% | |
| ! | CAGCCACCATACGAGCACTG+CGG | - | chr3_1:67582679-67582698 | None:intergenic | 60.0% |
| ACCGAACCATGCCCACCCCT+AGG | + | chr3_1:67579479-67579498 | Msa0370110:intron | 65.0% | |
| ! | GGTTGGCTGGGTGGTTGGAG+TGG | - | chr3_1:67582314-67582333 | None:intergenic | 65.0% |
| GGGGGGAATGTAAGGGGGGA+AGG | + | chr3_1:67582361-67582380 | Msa0370110:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 67577871 | 67585660 | 67577871 | ID=Msa0370110;Name=Msa0370110 |
| chr3_1 | mRNA | 67577871 | 67585660 | 67577871 | ID=Msa0370110-mRNA-1;Parent=Msa0370110;Name=Msa0370110-mRNA-1;_AED=0.16;_eAED=0.16;_QI=235|1|0.90|1|0.8|0.72|11|317|361 |
| chr3_1 | exon | 67577871 | 67578079 | 67577871 | ID=Msa0370110-mRNA-1:exon:13953;Parent=Msa0370110-mRNA-1 |
| chr3_1 | exon | 67579758 | 67579886 | 67579758 | ID=Msa0370110-mRNA-1:exon:13954;Parent=Msa0370110-mRNA-1 |
| chr3_1 | exon | 67580091 | 67580352 | 67580091 | ID=Msa0370110-mRNA-1:exon:13955;Parent=Msa0370110-mRNA-1 |
| chr3_1 | exon | 67580549 | 67580610 | 67580549 | ID=Msa0370110-mRNA-1:exon:13956;Parent=Msa0370110-mRNA-1 |
| chr3_1 | exon | 67580705 | 67580853 | 67580705 | ID=Msa0370110-mRNA-1:exon:13957;Parent=Msa0370110-mRNA-1 |
| chr3_1 | exon | 67581394 | 67581514 | 67581394 | ID=Msa0370110-mRNA-1:exon:13958;Parent=Msa0370110-mRNA-1 |
| chr3_1 | exon | 67581687 | 67581842 | 67581687 | ID=Msa0370110-mRNA-1:exon:13959;Parent=Msa0370110-mRNA-1 |
| chr3_1 | exon | 67584266 | 67584311 | 67584266 | ID=Msa0370110-mRNA-1:exon:13960;Parent=Msa0370110-mRNA-1 |
| chr3_1 | exon | 67584615 | 67584681 | 67584615 | ID=Msa0370110-mRNA-1:exon:13961;Parent=Msa0370110-mRNA-1 |
| chr3_1 | exon | 67584975 | 67585051 | 67584975 | ID=Msa0370110-mRNA-1:exon:13962;Parent=Msa0370110-mRNA-1 |
| chr3_1 | exon | 67585301 | 67585660 | 67585301 | ID=Msa0370110-mRNA-1:exon:13963;Parent=Msa0370110-mRNA-1 |
| chr3_1 | five_prime_UTR | 67577871 | 67578079 | 67577871 | ID=Msa0370110-mRNA-1:five_prime_utr;Parent=Msa0370110-mRNA-1 |
| chr3_1 | five_prime_UTR | 67579758 | 67579783 | 67579758 | ID=Msa0370110-mRNA-1:five_prime_utr;Parent=Msa0370110-mRNA-1 |
| chr3_1 | CDS | 67579784 | 67579886 | 67579784 | ID=Msa0370110-mRNA-1:cds;Parent=Msa0370110-mRNA-1 |
| chr3_1 | CDS | 67580091 | 67580352 | 67580091 | ID=Msa0370110-mRNA-1:cds;Parent=Msa0370110-mRNA-1 |
| chr3_1 | CDS | 67580549 | 67580610 | 67580549 | ID=Msa0370110-mRNA-1:cds;Parent=Msa0370110-mRNA-1 |
| chr3_1 | CDS | 67580705 | 67580853 | 67580705 | ID=Msa0370110-mRNA-1:cds;Parent=Msa0370110-mRNA-1 |
| chr3_1 | CDS | 67581394 | 67581514 | 67581394 | ID=Msa0370110-mRNA-1:cds;Parent=Msa0370110-mRNA-1 |
| chr3_1 | CDS | 67581687 | 67581842 | 67581687 | ID=Msa0370110-mRNA-1:cds;Parent=Msa0370110-mRNA-1 |
| chr3_1 | CDS | 67584266 | 67584311 | 67584266 | ID=Msa0370110-mRNA-1:cds;Parent=Msa0370110-mRNA-1 |
| chr3_1 | CDS | 67584615 | 67584681 | 67584615 | ID=Msa0370110-mRNA-1:cds;Parent=Msa0370110-mRNA-1 |
| chr3_1 | CDS | 67584975 | 67585051 | 67584975 | ID=Msa0370110-mRNA-1:cds;Parent=Msa0370110-mRNA-1 |
| chr3_1 | CDS | 67585301 | 67585343 | 67585301 | ID=Msa0370110-mRNA-1:cds;Parent=Msa0370110-mRNA-1 |
| chr3_1 | three_prime_UTR | 67585344 | 67585660 | 67585344 | ID=Msa0370110-mRNA-1:three_prime_utr;Parent=Msa0370110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
