Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134230 | XP_039683635.1 | 93.501 | 477 | 16 | 2 | 1 | 462 | 2 | 478 | 0.0 | 902 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134230 | sp|Q0QLE4|DML_EUBBA | 41.319 | 288 | 150 | 5 | 57 | 329 | 4 | 287 | 3.71e-64 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134230 | A2Q4X2 | 93.501 | 477 | 16 | 2 | 1 | 462 | 2 | 478 | 0.0 | 902 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa1134230 | 0.809644 | 1.709267e-50 | -8.615850e-47 |
| Msa0017420 | Msa1134230 | 0.800283 | 1.549845e-48 | -8.615850e-47 |
| Msa0022230 | Msa1134230 | 0.803190 | 3.924151e-49 | -8.615850e-47 |
| Msa0022960 | Msa1134230 | 0.821737 | 3.442777e-53 | -8.615850e-47 |
| Msa0025690 | Msa1134230 | 0.804788 | 1.825865e-49 | -8.615850e-47 |
| Msa0037040 | Msa1134230 | 0.808152 | 3.563933e-50 | -8.615850e-47 |
| Msa0041780 | Msa1134230 | 0.808540 | 2.945836e-50 | -8.615850e-47 |
| Msa0046670 | Msa1134230 | 0.851330 | 9.521742e-61 | -8.615850e-47 |
| Msa0081290 | Msa1134230 | 0.801172 | 1.020654e-48 | -8.615850e-47 |
| Msa0087130 | Msa1134230 | 0.801018 | 1.097228e-48 | -8.615850e-47 |
| Msa0090350 | Msa1134230 | 0.816141 | 6.444852e-52 | -8.615850e-47 |
| Msa0094990 | Msa1134230 | 0.811517 | 6.730143e-51 | -8.615850e-47 |
| Msa0096510 | Msa1134230 | 0.807107 | 5.940915e-50 | -8.615850e-47 |
| Msa0608940 | Msa1134230 | 0.814818 | 1.269132e-51 | -8.615850e-47 |
| Msa0625310 | Msa1134230 | 0.823396 | 1.416439e-53 | -8.615850e-47 |
| Msa0642150 | Msa1134230 | 0.816767 | 4.666508e-52 | -8.615850e-47 |
| Msa0668000 | Msa1134230 | 0.813601 | 2.356594e-51 | -8.615850e-47 |
| Msa0668160 | Msa1134230 | 0.800034 | 1.741938e-48 | -8.615850e-47 |
| Msa0687320 | Msa1134230 | 0.804683 | 1.919975e-49 | -8.615850e-47 |
| Msa0703150 | Msa1134230 | 0.814808 | 1.275645e-51 | -8.615850e-47 |
| Msa0705710 | Msa1134230 | 0.828988 | 6.617107e-55 | -8.615850e-47 |
| Msa0712100 | Msa1134230 | 0.822066 | 2.888996e-53 | -8.615850e-47 |
| Msa0712670 | Msa1134230 | 0.801291 | 9.649807e-49 | -8.615850e-47 |
| Msa0713170 | Msa1134230 | 0.811759 | 5.961568e-51 | -8.615850e-47 |
| Msa0729590 | Msa1134230 | 0.802450 | 5.577182e-49 | -8.615850e-47 |
| Msa0752490 | Msa1134230 | 0.805976 | 1.029326e-49 | -8.615850e-47 |
| Msa0795930 | Msa1134230 | 0.828346 | 9.461063e-55 | -8.615850e-47 |
| Msa0797980 | Msa1134230 | 0.810535 | 1.098453e-50 | -8.615850e-47 |
| Msa0802790 | Msa1134230 | 0.809679 | 1.679201e-50 | -8.615850e-47 |
| Msa0836060 | Msa1134230 | 0.801596 | 8.355030e-49 | -8.615850e-47 |
| Msa0133450 | Msa1134230 | 0.814062 | 1.864898e-51 | -8.615850e-47 |
| Msa0137810 | Msa1134230 | 0.828055 | 1.111877e-54 | -8.615850e-47 |
| Msa0139920 | Msa1134230 | 0.859338 | 4.433540e-63 | -8.615850e-47 |
| Msa0146600 | Msa1134230 | 0.810408 | 1.170174e-50 | -8.615850e-47 |
| Msa0184030 | Msa1134230 | 0.805425 | 1.343129e-49 | -8.615850e-47 |
| Msa0378670 | Msa1134230 | 0.804642 | 1.958709e-49 | -8.615850e-47 |
| Msa0463580 | Msa1134230 | 0.826899 | 2.105746e-54 | -8.615850e-47 |
| Msa1004140 | Msa1134230 | 0.950576 | 1.236908e-108 | -8.615850e-47 |
| Msa1028720 | Msa1134230 | 0.816580 | 5.138891e-52 | -8.615850e-47 |
| Msa1031220 | Msa1134230 | 0.810110 | 1.356477e-50 | -8.615850e-47 |
| Msa1033460 | Msa1134230 | 0.805118 | 1.557697e-49 | -8.615850e-47 |
| Msa1045860 | Msa1134230 | 0.852982 | 3.227712e-61 | -8.615850e-47 |
| Msa1045950 | Msa1134230 | 0.850343 | 1.806134e-60 | -8.615850e-47 |
| Msa1069450 | Msa1134230 | 0.810848 | 9.396630e-51 | -8.615850e-47 |
| Msa1071310 | Msa1134230 | 0.811200 | 7.885740e-51 | -8.615850e-47 |
| Msa1071460 | Msa1134230 | 0.827462 | 1.543885e-54 | -8.615850e-47 |
| Msa1072640 | Msa1134230 | 0.834460 | 2.960164e-56 | -8.615850e-47 |
| Msa1087410 | Msa1134230 | 0.849286 | 3.565138e-60 | -8.615850e-47 |
| Msa0267320 | Msa1134230 | 0.831854 | 1.318453e-55 | -8.615850e-47 |
| Msa0315010 | Msa1134230 | 0.805821 | 1.109554e-49 | -8.615850e-47 |
| Msa0330770 | Msa1134230 | 0.805422 | 1.345071e-49 | -8.615850e-47 |
| Msa0340870 | Msa1134230 | 0.802417 | 5.666690e-49 | -8.615850e-47 |
| Msa0348410 | Msa1134230 | 0.808670 | 2.763779e-50 | -8.615850e-47 |
| Msa1113780 | Msa1134230 | 0.804437 | 2.161653e-49 | -8.615850e-47 |
| Msa1132900 | Msa1134230 | 0.814642 | 1.388570e-51 | -8.615850e-47 |
| Msa1134150 | Msa1134230 | 0.992544 | 6.228639e-194 | -8.615850e-47 |
| Msa1134230 | Msa1156270 | 0.811033 | 8.570867e-51 | -8.615850e-47 |
| Msa1134230 | Msa1160470 | 0.801455 | 8.930221e-49 | -8.615850e-47 |
| Msa1134230 | Msa1182400 | 0.826347 | 2.851092e-54 | -8.615850e-47 |
| Msa1134230 | Msa1182960 | 0.831653 | 1.477890e-55 | -8.615850e-47 |
| Msa1134230 | Msa1204710 | 0.803136 | 4.026681e-49 | -8.615850e-47 |
| Msa1134230 | Msa1216900 | 0.805517 | 1.284799e-49 | -8.615850e-47 |
| Msa1134230 | Msa1228280 | 0.801256 | 9.812219e-49 | -8.615850e-47 |
| Msa1134230 | Msa1228330 | 0.800385 | 1.477146e-48 | -8.615850e-47 |
| Msa1134230 | Msa1230190 | 0.844208 | 8.717755e-59 | -8.615850e-47 |
| Msa1134230 | Msa1272770 | 0.841596 | 4.318509e-58 | -8.615850e-47 |
| Msa1134230 | Msa1277930 | 0.800207 | 1.605796e-48 | -8.615850e-47 |
| Msa1134230 | Msa1286950 | 0.824187 | 9.244328e-54 | -8.615850e-47 |
| Msa1134230 | Msa1292620 | 0.809599 | 1.747317e-50 | -8.615850e-47 |
| Msa1134230 | Msa1297540 | 0.813951 | 1.973033e-51 | -8.615850e-47 |
| Msa1134230 | Msa1319230 | 0.831267 | 1.838724e-55 | -8.615850e-47 |
| Msa1134230 | Msa1319720 | 0.803993 | 2.673150e-49 | -8.615850e-47 |
| Msa1134230 | Msa1320660 | 0.810330 | 1.216473e-50 | -8.615850e-47 |
| Msa1134230 | Msa1329660 | 0.804904 | 1.726675e-49 | -8.615850e-47 |
| Msa1134230 | Msa1335130 | 0.807165 | 5.774116e-50 | -8.615850e-47 |
| Msa1134230 | Msa1371060 | 0.827126 | 1.858602e-54 | -8.615850e-47 |
| Msa1134230 | Msa1381720 | 0.823389 | 1.422211e-53 | -8.615850e-47 |
| Msa1134230 | Msa1384980 | 0.801328 | 9.482365e-49 | -8.615850e-47 |
| Msa1134230 | Msa1392570 | 0.807787 | 4.262298e-50 | -8.615850e-47 |
| Msa1134230 | Msa1410880 | 0.803312 | 3.702159e-49 | -8.615850e-47 |
| Msa1134230 | Msa1412740 | 0.802595 | 5.206624e-49 | -8.615850e-47 |
| Msa1134230 | Msa1413360 | 0.823922 | 1.067048e-53 | -8.615850e-47 |
| Msa1134230 | Msa1418780 | 0.812289 | 4.568736e-51 | -8.615850e-47 |
| Msa1134230 | Msa1431240 | 0.805641 | 1.210228e-49 | -8.615850e-47 |
| Msa1134230 | Msa1432250 | 0.841408 | 4.839194e-58 | -8.615850e-47 |
| Msa1134230 | Msa1442070 | 0.824297 | 8.712211e-54 | -8.615850e-47 |
| Msa1134230 | Msa1446220 | 0.805134 | 1.545456e-49 | -8.615850e-47 |
| Msa1134230 | Msa1450850 | 0.845223 | 4.643883e-59 | -8.615850e-47 |
| Msa1134230 | Msa1459630 | 0.821827 | 3.282252e-53 | -8.615850e-47 |
| Msa0483090 | Msa1134230 | 0.809058 | 2.283125e-50 | -8.615850e-47 |
| Msa0499870 | Msa1134230 | 0.836589 | 8.565680e-57 | -8.615850e-47 |
| Msa0520810 | Msa1134230 | 0.801602 | 8.335179e-49 | -8.615850e-47 |
| Msa0580430 | Msa1134230 | 0.825427 | 4.716518e-54 | -8.615850e-47 |
| Msa0844970 | Msa1134230 | 0.800546 | 1.369929e-48 | -8.615850e-47 |
| Msa0861480 | Msa1134230 | 0.821247 | 4.469854e-53 | -8.615850e-47 |
| Msa0868040 | Msa1134230 | 0.807478 | 4.956434e-50 | -8.615850e-47 |
| Msa0964570 | Msa1134230 | 0.828981 | 6.642993e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134230 | MtrunA17_Chr7g0214651 | 93.501 | 477 | 16 | 2 | 1 | 462 | 2 | 478 | 0.0 | 902 |
| Msa1134230 | MtrunA17_Chr7g0214571 | 68.939 | 264 | 68 | 2 | 57 | 306 | 9 | 272 | 2.29e-125 | 368 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134230 | AT2G43180.1 | 65.265 | 452 | 127 | 8 | 29 | 462 | 40 | 479 | 0.0 | 553 |
| Msa1134230 | AT2G43180.3 | 65.265 | 452 | 126 | 8 | 29 | 462 | 40 | 478 | 0.0 | 551 |
| Msa1134230 | AT2G43180.2 | 63.855 | 415 | 121 | 7 | 29 | 426 | 40 | 442 | 1.47e-174 | 497 |
| Msa1134230 | AT2G43180.4 | 63.210 | 405 | 120 | 7 | 29 | 416 | 40 | 432 | 3.44e-165 | 474 |
| Msa1134230 | AT1G77060.1 | 34.494 | 316 | 181 | 8 | 38 | 334 | 26 | 334 | 5.07e-50 | 174 |
| Msa1134230 | AT1G21440.2 | 35.135 | 296 | 167 | 8 | 59 | 334 | 42 | 332 | 1.14e-46 | 165 |
| Msa1134230 | AT1G21440.1 | 35.135 | 296 | 167 | 8 | 59 | 334 | 42 | 332 | 1.14e-46 | 165 |
Find 153 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATATACAGGCTGGATTTC+TGG | 0.081935 | 7_4:+638628 | Msa1134230:intron |
| AACTTAACTGGTTCTTTATT+TGG | 0.127157 | 7_4:-639718 | None:intergenic |
| GCCTATCCCCTTTCCTTGAT+TGG | 0.216177 | 7_4:+636436 | Msa1134230:CDS |
| ACATTTCTTTGTTAATATTC+TGG | 0.227076 | 7_4:-640079 | None:intergenic |
| TTAGGAACTACAAGCATAAA+TGG | 0.227423 | 7_4:+639739 | Msa1134230:three_prime_UTR |
| ATCAGATCCACTCTCATTTC+TGG | 0.228975 | 7_4:-636078 | None:intergenic |
| CGGGACCAGATTCCAGTAAA+AGG | 0.250372 | 7_4:-638086 | None:intergenic |
| TGACAGGATTCAAGTATTTC+TGG | 0.250527 | 7_4:+638855 | Msa1134230:CDS |
| TCAAAAGTTGGCATGCTTCC+TGG | 0.263871 | 7_4:-637323 | None:intergenic |
| CTTGTAGTTCCTAACTTAAC+TGG | 0.287922 | 7_4:-639730 | None:intergenic |
| ACTCTGAGAATTAAAATAAT+TGG | 0.288336 | 7_4:+638110 | Msa1134230:CDS |
| GAAGAAATTAAGGATACTTT+AGG | 0.291621 | 7_4:+637344 | Msa1134230:CDS |
| GCCTCCTCCTTCAAGCATAT+TGG | 0.295305 | 7_4:-636359 | None:intergenic |
| TCTGTTGGAATTCCTGTTAT+TGG | 0.302952 | 7_4:+634555 | Msa1134230:CDS |
| GGCCGCGCCGGCGCCACCCC+TGG | 0.321442 | 7_4:+634198 | Msa1134230:CDS |
| TTCTATCTCTGCTTCTCGAT+TGG | 0.331860 | 7_4:+634467 | Msa1134230:CDS |
| GATGCGCTGACTGCTATTAA+AGG | 0.334698 | 7_4:+637284 | Msa1134230:CDS |
| GAATAAAATAAAATAAAATA+AGG | 0.345431 | 7_4:-639937 | None:intergenic |
| TCTATCTCTGCTTCTCGATT+GGG | 0.358777 | 7_4:+634468 | Msa1134230:CDS |
| CCTGATGTGTACAATAAATA+TGG | 0.361591 | 7_4:+638044 | Msa1134230:CDS |
| ACTACCATGGAAAGGATATA+GGG | 0.366864 | 7_4:-639854 | None:intergenic |
| GTTATTGGTGATGCTGATAA+TGG | 0.368766 | 7_4:+634570 | Msa1134230:CDS |
| GAATGTTAAGAGAACTGTTA+AGG | 0.376366 | 7_4:+634608 | Msa1134230:CDS |
| AACTCTATGCAGCTTTGGGT+GGG | 0.377383 | 7_4:+638755 | Msa1134230:intron |
| CGATTGGGATTGCCTGATAC+AGG | 0.378160 | 7_4:+634483 | Msa1134230:CDS |
| TAAGACAAATAGCCTGTATC+AGG | 0.383361 | 7_4:-634495 | None:intergenic |
| CTGGTTCTTTATTTGGTATG+TGG | 0.385738 | 7_4:-639711 | None:intergenic |
| AAAAGCTTCCATCTCTTGTC+TGG | 0.386562 | 7_4:-636219 | None:intergenic |
| CATGCTGTTGTGCCACGATT+AGG | 0.387657 | 7_4:-639650 | None:intergenic |
| GCCGGCGCCACCCCTGGTGG+CGG | 0.388067 | 7_4:+634204 | Msa1134230:CDS |
| GATGATGCAACAGAGGAAAC+TGG | 0.388348 | 7_4:+638799 | Msa1134230:CDS |
| AATGTTAAGAGAACTGTTAA+GGG | 0.392156 | 7_4:+634609 | Msa1134230:CDS |
| AACTACCATGGAAAGGATAT+AGG | 0.394104 | 7_4:-639855 | None:intergenic |
| TCCTTAATTTCTTCAAAAGT+TGG | 0.396934 | 7_4:-637335 | None:intergenic |
| TCCGCCACAATTGGCCGCGC+CGG | 0.404713 | 7_4:+634186 | Msa1134230:CDS |
| TGTGTGTGACCACACGCTTT+TGG | 0.411006 | 7_4:-635996 | None:intergenic |
| AAGATACTTGTACATCTGTA+AGG | 0.412096 | 7_4:+639993 | Msa1134230:three_prime_UTR |
| AATAAAGAACCAGTTAAGTT+AGG | 0.416299 | 7_4:+639721 | Msa1134230:three_prime_UTR |
| GGCGCCGGCGCGGCCAATTG+TGG | 0.421272 | 7_4:-634190 | None:intergenic |
| GACGAGATTGGAACTGGAAA+GGG | 0.424270 | 7_4:-634269 | None:intergenic |
| GTTTAGAGTTCCGACGAGAT+TGG | 0.427765 | 7_4:-634281 | None:intergenic |
| AGTTCCGACGAGATTGGAAC+TGG | 0.427959 | 7_4:-634275 | None:intergenic |
| CTCATGGTGATGAAGGTAAT+TGG | 0.428650 | 7_4:+639608 | Msa1134230:three_prime_UTR |
| ATGAGCTGCTCCGCCACAAT+TGG | 0.433929 | 7_4:+634177 | Msa1134230:CDS |
| CGCGCCGGCGCCACCCCTGG+TGG | 0.441487 | 7_4:+634201 | Msa1134230:CDS |
| CACCAGGGGTGGCGCCGGCG+CGG | 0.444288 | 7_4:-634200 | None:intergenic |
| ATTGTGATTGTGGCGCGTAT+TGG | 0.444681 | 7_4:-634303 | None:intergenic |
| TTATCAGCATCACCAATAAC+AGG | 0.448452 | 7_4:-634567 | None:intergenic |
| AGGATATAGGGGTGTCTCCA+TGG | 0.455671 | 7_4:-639842 | None:intergenic |
| CCTCATCAAGAGACAGGGCT+TGG | 0.459572 | 7_4:-636130 | None:intergenic |
| GCCGGCGCGGCCAATTGTGG+CGG | 0.466460 | 7_4:-634187 | None:intergenic |
| CAACTCTATGCAGCTTTGGG+TGG | 0.467661 | 7_4:+638754 | Msa1134230:intron |
| AGAAACTCCAATCAAGGAAA+GGG | 0.468628 | 7_4:-636443 | None:intergenic |
| GATACAGGCTATTTGTCTTA+CGG | 0.470981 | 7_4:+634498 | Msa1134230:CDS |
| AAGGTAATTGGTGGAAGCTA+TGG | 0.471564 | 7_4:+639620 | Msa1134230:three_prime_UTR |
| GGAATCACAAACATAGTTCC+TGG | 0.471978 | 7_4:+638653 | Msa1134230:CDS |
| CCATATTTATTGTACACATC+AGG | 0.472485 | 7_4:-638044 | None:intergenic |
| TCAAGGGCATTTGCTGATGC+TGG | 0.476092 | 7_4:+636164 | Msa1134230:CDS |
| ATTAAAATAATTGGCAGAGA+TGG | 0.480124 | 7_4:+638119 | Msa1134230:CDS |
| CGTCTTATTACTCAATCTGT+TGG | 0.481787 | 7_4:+634540 | Msa1134230:CDS |
| GGTGATGCTGATAATGGTTA+TGG | 0.483159 | 7_4:+634576 | Msa1134230:CDS |
| GCAAATCTCGTTCAATCCGC+TGG | 0.494635 | 7_4:+634417 | Msa1134230:CDS |
| TTTATAGCTCATGGTGATGA+AGG | 0.494803 | 7_4:+639601 | Msa1134230:three_prime_UTR |
| TCCAGGAAATTTATAGCTCA+TGG | 0.495176 | 7_4:+639592 | Msa1134230:intron |
| AGAGTGCCTCATCAAGAGAC+AGG | 0.495586 | 7_4:-636136 | None:intergenic |
| AATATGGTGCAGATGGTTCA+AGG | 0.496146 | 7_4:+638060 | Msa1134230:CDS |
| TTAATGACAGAATGGGTGAC+AGG | 0.501453 | 7_4:+638839 | Msa1134230:CDS |
| GCCAATATGCTTGAAGGAGG+AGG | 0.502851 | 7_4:+636358 | Msa1134230:CDS |
| CTCTTGATGAGGCACTCTAT+AGG | 0.504181 | 7_4:+636141 | Msa1134230:CDS |
| GGTGTTATAACTTCCACAAT+GGG | 0.507288 | 7_4:-638023 | None:intergenic |
| CCTTTCCATGGTAGTTCTTG+CGG | 0.508276 | 7_4:+639862 | Msa1134230:three_prime_UTR |
| ATGATGCAACAGAGGAAACT+GGG | 0.509800 | 7_4:+638800 | Msa1134230:CDS |
| TAGGAACTACAAGCATAAAT+GGG | 0.513024 | 7_4:+639740 | Msa1134230:three_prime_UTR |
| AAACAATATTTGATATCAGT+GGG | 0.518843 | 7_4:+639773 | Msa1134230:three_prime_UTR |
| AACGCAACCGCCACCAGGGG+TGG | 0.521008 | 7_4:-634211 | None:intergenic |
| AGTTTCTATACGAGCAATGC+AGG | 0.521125 | 7_4:+636459 | Msa1134230:CDS |
| TGTGATCACTTACAGGAATA+CGG | 0.523923 | 7_4:-638160 | None:intergenic |
| CAAACAATATTTGATATCAG+TGG | 0.526621 | 7_4:+639772 | Msa1134230:three_prime_UTR |
| GTGTAGGCCAATATGCTTGA+AGG | 0.526780 | 7_4:+636352 | Msa1134230:intron |
| ACTCTATGCAGCTTTGGGTG+GGG | 0.528969 | 7_4:+638756 | Msa1134230:intron |
| TGAGGAACGCAACCGCCACC+AGG | 0.531589 | 7_4:-634216 | None:intergenic |
| AAGAAAATGATGTACGGAAG+TGG | 0.534287 | 7_4:-634245 | None:intergenic |
| TCGTATAGAAACTCCAATCA+AGG | 0.535946 | 7_4:-636449 | None:intergenic |
| CCAAGCCCTGTCTCTTGATG+AGG | 0.536017 | 7_4:+636130 | Msa1134230:CDS |
| CGCGAAATTCTCGATTCACC+AGG | 0.537885 | 7_4:+634357 | Msa1134230:CDS |
| GCTGGACCTTGATGAAGTCC+TGG | 0.539349 | 7_4:-634375 | None:intergenic |
| CGACGAGATTGGAACTGGAA+AGG | 0.540131 | 7_4:-634270 | None:intergenic |
| CCTCTTGAACTTGAAGACAT+TGG | 0.540684 | 7_4:+636400 | Msa1134230:CDS |
| GGGACCAGATTCCAGTAAAA+GGG | 0.540721 | 7_4:-638085 | None:intergenic |
| AGACAGGGCTTGGCGCGCAT+CGG | 0.543526 | 7_4:-636120 | None:intergenic |
| GTTGGCATGCTTCCTGGAGG+AGG | 0.545154 | 7_4:-637317 | None:intergenic |
| GGAGGTCGTATTCCTCCTCC+AGG | 0.553198 | 7_4:+637305 | Msa1134230:CDS |
| TCTTGCGGCAATATATATGC+TGG | 0.553689 | 7_4:+639877 | Msa1134230:three_prime_UTR |
| TACAATAAATATGGTGCAGA+TGG | 0.558350 | 7_4:+638053 | Msa1134230:CDS |
| GGATATAGGGGTGTCTCCAT+GGG | 0.559429 | 7_4:-639841 | None:intergenic |
| ATGAGGCACTCTATAGGTCA+AGG | 0.559464 | 7_4:+636147 | Msa1134230:CDS |
| CCAATGTCTTCAAGTTCAAG+AGG | 0.560685 | 7_4:-636400 | None:intergenic |
| TAGAAACTCCAATCAAGGAA+AGG | 0.561312 | 7_4:-636444 | None:intergenic |
| CTGAGTGCGTCGAAACATGC+TGG | 0.564319 | 7_4:-634393 | None:intergenic |
| ACATTGCTTTCTCAACTCCA+AGG | 0.571756 | 7_4:+638887 | Msa1134230:three_prime_UTR |
| ACTTGCTTCCAGACAAGAGA+TGG | 0.577927 | 7_4:+636211 | Msa1134230:CDS |
| AAAATGATGTACGGAAGTGG+TGG | 0.580400 | 7_4:-634242 | None:intergenic |
| TGGATCTGATATTGTGATTG+TGG | 0.581868 | 7_4:+636091 | Msa1134230:CDS |
| AAACCGCTTGTGAAACATAA+CGG | 0.583311 | 7_4:-634444 | None:intergenic |
| TACGGCGAAATCGTCGAACA+AGG | 0.589915 | 7_4:+634516 | Msa1134230:CDS |
| ATTCTGGCTTAAAACTCTGA+AGG | 0.591164 | 7_4:-640063 | None:intergenic |
| CATTGCTTTCTCAACTCCAA+GGG | 0.593091 | 7_4:+638888 | Msa1134230:three_prime_UTR |
| TCCAATCAAGGAAAGGGGAT+AGG | 0.598046 | 7_4:-636437 | None:intergenic |
| TTTCCGTTATGTTTCACAAG+CGG | 0.598196 | 7_4:+634441 | Msa1134230:CDS |
| CTTTCCAGTTCCAATCTCGT+CGG | 0.602346 | 7_4:+634271 | Msa1134230:CDS |
| AGATACTTGTACATCTGTAA+GGG | 0.607078 | 7_4:+639994 | Msa1134230:three_prime_UTR |
| ATACAGGCTGGATTTCTGGA+TGG | 0.607983 | 7_4:+638632 | Msa1134230:intron |
| TCTCTTTGAAAGCAGCTGAT+CGG | 0.610609 | 7_4:-637411 | None:intergenic |
| AAAGCGTGTGGTCACACACA+GGG | 0.610994 | 7_4:+635999 | Msa1134230:CDS |
| AGGTGTTATAACTTCCACAA+TGG | 0.614049 | 7_4:-638024 | None:intergenic |
| TCACACACAGGGGAGGAAAG+TGG | 0.615212 | 7_4:+636010 | Msa1134230:CDS |
| GAAACTCCAATCAAGGAAAG+GGG | 0.617435 | 7_4:-636442 | None:intergenic |
| AAGGGGAAGAAAATGATGTA+CGG | 0.618032 | 7_4:-634251 | None:intergenic |
| TATTGCCGCAAGAACTACCA+TGG | 0.618271 | 7_4:-639867 | None:intergenic |
| GATTCACCAGGACTTCATCA+AGG | 0.618760 | 7_4:+634369 | Msa1134230:CDS |
| AAAAGCGTGTGGTCACACAC+AGG | 0.622362 | 7_4:+635998 | Msa1134230:CDS |
| AGAACATGAAATTGTGATTG+TGG | 0.623320 | 7_4:-634313 | None:intergenic |
| GAAAGTGGTATCGAGAGAAG+AGG | 0.623798 | 7_4:+636025 | Msa1134230:CDS |
| AGTTCAAGAGGAGTGAGTAT+CGG | 0.627598 | 7_4:-636388 | None:intergenic |
| CTACCATGGAAAGGATATAG+GGG | 0.629043 | 7_4:-639853 | None:intergenic |
| GATCAGCTGCTTTCAAAGAG+AGG | 0.629756 | 7_4:+637413 | Msa1134230:CDS |
| ACGAGATTGGAACTGGAAAG+GGG | 0.630244 | 7_4:-634268 | None:intergenic |
| GTGTAGTTTAAAATATCACA+TGG | 0.630320 | 7_4:+639679 | Msa1134230:three_prime_UTR |
| ACACCCCTATATCCTTTCCA+TGG | 0.631162 | 7_4:+639850 | Msa1134230:three_prime_UTR |
| CCGCAAGAACTACCATGGAA+AGG | 0.631276 | 7_4:-639862 | None:intergenic |
| AGGAACGCAACCGCCACCAG+GGG | 0.636802 | 7_4:-634214 | None:intergenic |
| GAGGAACGCAACCGCCACCA+GGG | 0.638086 | 7_4:-634215 | None:intergenic |
| ACTATTGGATGATGCAACAG+AGG | 0.638385 | 7_4:+638792 | Msa1134230:CDS |
| ATATGGTGCAGATGGTTCAA+GGG | 0.645347 | 7_4:+638061 | Msa1134230:CDS |
| ATGGTGATGAAGGTAATTGG+TGG | 0.647130 | 7_4:+639611 | Msa1134230:three_prime_UTR |
| TGAGGCACTCTATAGGTCAA+GGG | 0.655122 | 7_4:+636148 | Msa1134230:CDS |
| GCGCTGACTGCTATTAAAGG+AGG | 0.657198 | 7_4:+637287 | Msa1134230:CDS |
| TAGGCCAATATGCTTGAAGG+AGG | 0.668475 | 7_4:+636355 | Msa1134230:intron |
| CTAATCGTGGCACAACAGCA+TGG | 0.669353 | 7_4:+639651 | Msa1134230:three_prime_UTR |
| GTACGGAAGTGGTGGAGATG+AGG | 0.669729 | 7_4:-634234 | None:intergenic |
| CGTGTGGTCACACACAGGGG+AGG | 0.673900 | 7_4:+636003 | Msa1134230:CDS |
| AAAGTTGGCATGCTTCCTGG+AGG | 0.678103 | 7_4:-637320 | None:intergenic |
| GAGTGCCTCATCAAGAGACA+GGG | 0.678992 | 7_4:-636135 | None:intergenic |
| AACTATCGAAGATCCCATTG+TGG | 0.679713 | 7_4:+638010 | Msa1134230:CDS |
| TGATGCAACAGAGGAAACTG+GGG | 0.680940 | 7_4:+638801 | Msa1134230:CDS |
| GTTGATGCCAGAAATGAGAG+TGG | 0.697095 | 7_4:+636071 | Msa1134230:CDS |
| TAGGTATCTCCAAAAGCGTG+TGG | 0.697406 | 7_4:+635987 | Msa1134230:intron |
| AGTCATGCGAATCAAAGCTG+CGG | 0.698225 | 7_4:+636049 | Msa1134230:CDS |
| TATGGATTGAAGCCTAATCG+TGG | 0.705342 | 7_4:+639638 | Msa1134230:three_prime_UTR |
| GAAACATAACGGAAATCCAG+CGG | 0.715859 | 7_4:-634433 | None:intergenic |
| AAGCGTGTGGTCACACACAG+GGG | 0.719574 | 7_4:+636000 | Msa1134230:CDS |
| TTGGAGTTGAGAAAGCAATG+TGG | 0.728785 | 7_4:-638885 | None:intergenic |
| GATGCAACAGAGGAAACTGG+GGG | 0.752877 | 7_4:+638802 | Msa1134230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAATTCAATTCATTT+AGG | + | chr7_4:635089-635108 | Msa1134230:intron | 10.0% |
| !! | TATGAAATTGTAAAATAATT+AGG | + | chr7_4:635174-635193 | Msa1134230:intron | 10.0% |
| !! | AAAATAATTAATGATTATCA+AGG | - | chr7_4:636508-636527 | None:intergenic | 10.0% |
| !!! | AAATAATTAGGTTTGTTTTT+CGG | + | chr7_4:635186-635205 | Msa1134230:intron | 15.0% |
| !! | GTATATTTAATAATTCAGTT+TGG | + | chr7_4:635610-635629 | Msa1134230:intron | 15.0% |
| !!! | TTGTAATTTTAATACATTCA+TGG | + | chr7_4:635733-635752 | Msa1134230:intron | 15.0% |
| !! | TCTAATAAAAATTTCATTCT+GGG | - | chr7_4:636910-636929 | None:intergenic | 15.0% |
| !!! | ATTTTGTGATTTATGATTTT+GGG | - | chr7_4:636995-637014 | None:intergenic | 15.0% |
| !!! | TTATTAGCTTTGTATTTTAT+TGG | + | chr7_4:637719-637738 | Msa1134230:intron | 15.0% |
| !!! | TTTATATGTTTTACTTCTAA+AGG | + | chr7_4:637817-637836 | Msa1134230:intron | 15.0% |
| !! | AAAAATAAAGTAAGTACATA+CGG | - | chr7_4:638406-638425 | None:intergenic | 15.0% |
| !!! | ATTATAGAAGCATTTATAAA+TGG | - | chr7_4:638687-638706 | None:intergenic | 15.0% |
| !! | ATGTGATTCAAAATAAAAAA+TGG | - | chr7_4:640020-640039 | None:intergenic | 15.0% |
| !!! | CATCATAATGCTATTTTTAT+TGG | - | chr7_4:635006-635025 | None:intergenic | 20.0% |
| !! | TATCTTCTGTTAGTAATTTA+TGG | - | chr7_4:635700-635719 | None:intergenic | 20.0% |
| !! | AAACAATGGTTTACTTTATT+TGG | + | chr7_4:635769-635788 | Msa1134230:intron | 20.0% |
| !!! | ATTTTGAAATATTGACAATG+TGG | + | chr7_4:635803-635822 | Msa1134230:intron | 20.0% |
| !! | TGAAGTAATTTAAAGAAAGT+TGG | - | chr7_4:635950-635969 | None:intergenic | 20.0% |
| !!! | TAATAGAAACATACCATTTT+TGG | - | chr7_4:636266-636285 | None:intergenic | 20.0% |
| !! | TGATAATAGTAAAAGAAGAA+AGG | + | chr7_4:636294-636313 | Msa1134230:intron | 20.0% |
| !! | GATAATAGTAAAAGAAGAAA+GGG | + | chr7_4:636295-636314 | Msa1134230:intron | 20.0% |
| !! | GCTATACTAATATTTATGTA+TGG | + | chr7_4:636327-636346 | Msa1134230:intron | 20.0% |
| !! | CTAATAAAAATTTCATTCTG+GGG | - | chr7_4:636909-636928 | None:intergenic | 20.0% |
| !! | GTCTAATAAAAATTTCATTC+TGG | - | chr7_4:636911-636930 | None:intergenic | 20.0% |
| !!! | ATGACTATATGATTTTAACT+TGG | + | chr7_4:636965-636984 | Msa1134230:intron | 20.0% |
| !!! | TTTTGTGATTTATGATTTTG+GGG | - | chr7_4:636994-637013 | None:intergenic | 20.0% |
| !!! | GATTTTGTGATTTATGATTT+TGG | - | chr7_4:636996-637015 | None:intergenic | 20.0% |
| !! | ATAAATCACAAAATCATACT+TGG | + | chr7_4:637001-637020 | Msa1134230:intron | 20.0% |
| !! | AAATTGTTAACCATTTGAAA+TGG | - | chr7_4:637042-637061 | None:intergenic | 20.0% |
| !! | TGAATATGATCATTAACATT+CGG | - | chr7_4:637099-637118 | None:intergenic | 20.0% |
| !! | ACTATCTATAATTAAGTAGA+TGG | - | chr7_4:637756-637775 | None:intergenic | 20.0% |
| !!! | ACTCTGAGAATTAAAATAAT+TGG | + | chr7_4:638110-638129 | Msa1134230:CDS | 20.0% |
| !! | ACAAATTTAAGAGAAAATGA+TGG | + | chr7_4:638195-638214 | Msa1134230:intron | 20.0% |
| !! | ATAAAAACAAATCATGTAAC+TGG | - | chr7_4:638346-638365 | None:intergenic | 20.0% |
| !!! | TTTTGACAAATGAAAGAAAT+TGG | - | chr7_4:638382-638401 | None:intergenic | 20.0% |
| !! | ATCTCTTGTTAATATTGTTT+AGG | - | chr7_4:639016-639035 | None:intergenic | 20.0% |
| !! | AAACAATATTTGATATCAGT+GGG | + | chr7_4:639773-639792 | Msa1134230:three_prime_UTR | 20.0% |
| !! | AAATAAGGATTGCAAAAAAA+AGG | - | chr7_4:639925-639944 | None:intergenic | 20.0% |
| ! | AATGTTAAGAGAACTGTTAA+GGG | + | chr7_4:634609-634628 | Msa1134230:CDS | 25.0% |
| ! | TAGGAACTTACATATTAATG+TGG | + | chr7_4:634753-634772 | Msa1134230:intron | 25.0% |
| !!! | AGGATTTAAGTTGTTTACAT+TGG | + | chr7_4:634920-634939 | Msa1134230:intron | 25.0% |
| ! | GTGAAAAAACTTTACACTAT+TGG | + | chr7_4:635046-635065 | Msa1134230:intron | 25.0% |
| ! | TGACGTTAAGTTTGTAATAT+CGG | + | chr7_4:635231-635250 | Msa1134230:intron | 25.0% |
| ! | GAGTATTATATTAGTCAGTT+TGG | + | chr7_4:635373-635392 | Msa1134230:intron | 25.0% |
| ! | TGATAATAGATCTTAACAGA+AGG | + | chr7_4:635499-635518 | Msa1134230:intron | 25.0% |
| !!! | ATTTTAATCCTAGAATCTCT+GGG | + | chr7_4:635557-635576 | Msa1134230:intron | 25.0% |
| !! | TTAATACATTCATGGACTAA+AGG | + | chr7_4:635741-635760 | Msa1134230:intron | 25.0% |
| !! | TAATACATTCATGGACTAAA+GGG | + | chr7_4:635742-635761 | Msa1134230:intron | 25.0% |
| ! | CAACATGTCAAGTTATAATA+AGG | - | chr7_4:635917-635936 | None:intergenic | 25.0% |
| ! | ATATTTATGTATGGTTGTGT+AGG | + | chr7_4:636336-636355 | Msa1134230:intron | 25.0% |
| ! | GATTATCAAGGTTAAAGAAA+GGG | - | chr7_4:636496-636515 | None:intergenic | 25.0% |
| ! | TGATTATCAAGGTTAAAGAA+AGG | - | chr7_4:636497-636516 | None:intergenic | 25.0% |
| ! | CACAATTATAAACATGCTAA+AGG | + | chr7_4:636787-636806 | Msa1134230:intron | 25.0% |
| ! | AAATCATACTTGGTTGTTTA+TGG | + | chr7_4:637011-637030 | Msa1134230:intron | 25.0% |
| !! | ATGTCTATGATTTTCTGTAT+AGG | + | chr7_4:637262-637281 | Msa1134230:intron | 25.0% |
| ! | TCCTTAATTTCTTCAAAAGT+TGG | - | chr7_4:637338-637357 | None:intergenic | 25.0% |
| ! | GAAGAAATTAAGGATACTTT+AGG | + | chr7_4:637344-637363 | Msa1134230:CDS | 25.0% |
| ! | TTGATACTTTACTACCATAA+AGG | + | chr7_4:637560-637579 | Msa1134230:intron | 25.0% |
| ! | TTTGAACTAACTATATCTCT+AGG | + | chr7_4:637670-637689 | Msa1134230:intron | 25.0% |
| ! | TAATTATAGATAGTTAGTCG+TGG | + | chr7_4:637762-637781 | Msa1134230:intron | 25.0% |
| !!! | TTATTTTAATTCTCAGAGTC+CGG | - | chr7_4:638109-638128 | None:intergenic | 25.0% |
| ! | ATTAAAATAATTGGCAGAGA+TGG | + | chr7_4:638119-638138 | Msa1134230:CDS | 25.0% |
| !! | AGTTATGCATATTTTCTACA+TGG | + | chr7_4:638487-638506 | Msa1134230:intron | 25.0% |
| ! | CATGATTATGTGTATGAATT+TGG | + | chr7_4:638529-638548 | Msa1134230:intron | 25.0% |
| ! | GTATATGTATTGTGAGAAAA+TGG | - | chr7_4:638604-638623 | None:intergenic | 25.0% |
| !! | ACATATACTTTGCTATATAC+AGG | + | chr7_4:638616-638635 | Msa1134230:intron | 25.0% |
| !!! | CTAGATTTTAATGACAGAAT+GGG | + | chr7_4:638832-638851 | Msa1134230:CDS | 25.0% |
| ! | TCTTGTTAATATTGTTTAGG+AGG | - | chr7_4:639013-639032 | None:intergenic | 25.0% |
| ! | ATATCAATTAAGCTTATGTG+AGG | + | chr7_4:639041-639060 | Msa1134230:intron | 25.0% |
| ! | TGAATGTTATACCAAATAGA+AGG | + | chr7_4:639083-639102 | Msa1134230:intron | 25.0% |
| ! | TTATCATACAACTGATCTTT+AGG | - | chr7_4:639400-639419 | None:intergenic | 25.0% |
| !! | GTGTAGTTTAAAATATCACA+TGG | + | chr7_4:639679-639698 | Msa1134230:three_prime_UTR | 25.0% |
| !! | AACTTAACTGGTTCTTTATT+TGG | - | chr7_4:639721-639740 | None:intergenic | 25.0% |
| ! | AATAAAGAACCAGTTAAGTT+AGG | + | chr7_4:639721-639740 | Msa1134230:three_prime_UTR | 25.0% |
| ! | CAAACAATATTTGATATCAG+TGG | + | chr7_4:639772-639791 | Msa1134230:three_prime_UTR | 25.0% |
| !! | TTATATTTTCTTTGTTCCCA+TGG | + | chr7_4:639825-639844 | Msa1134230:three_prime_UTR | 25.0% |
| AGAACATGAAATTGTGATTG+TGG | - | chr7_4:634316-634335 | None:intergenic | 30.0% | |
| GAATGTTAAGAGAACTGTTA+AGG | + | chr7_4:634608-634627 | Msa1134230:CDS | 30.0% | |
| ATGTATCCAACTAAAATCCT+TGG | - | chr7_4:634683-634702 | None:intergenic | 30.0% | |
| GCATTATGATGTGATTTGAT+TGG | + | chr7_4:635015-635034 | Msa1134230:intron | 30.0% | |
| TATGATGTGATTTGATTGGA+TGG | + | chr7_4:635019-635038 | Msa1134230:intron | 30.0% | |
| !! | AATTAGGTTTGTTTTTCGGT+TGG | + | chr7_4:635190-635209 | Msa1134230:intron | 30.0% |
| !! | TTTTTCGGTTGGTATTTGTA+GGG | + | chr7_4:635201-635220 | Msa1134230:intron | 30.0% |
| GACGTTAAGTTTGTAATATC+GGG | + | chr7_4:635232-635251 | Msa1134230:intron | 30.0% | |
| ACGTTAAGTTTGTAATATCG+GGG | + | chr7_4:635233-635252 | Msa1134230:intron | 30.0% | |
| TGAAACTGAGTGAATAATGT+CGG | + | chr7_4:635262-635281 | Msa1134230:intron | 30.0% | |
| AATAGATCATTGAATGTGTG+AGG | + | chr7_4:635298-635317 | Msa1134230:intron | 30.0% | |
| !! | CATTTTAATCCTAGAATCTC+TGG | + | chr7_4:635556-635575 | Msa1134230:intron | 30.0% |
| TAGTAATTTATGGACCAAAC+TGG | - | chr7_4:635690-635709 | None:intergenic | 30.0% | |
| TTGAAATATTGACAATGTGG+AGG | + | chr7_4:635806-635825 | Msa1134230:intron | 30.0% | |
| TACTCATCACAAATCCTTAA+TGG | + | chr7_4:637126-637145 | Msa1134230:intron | 30.0% | |
| ATACTACAACACTCTTACAT+TGG | - | chr7_4:637156-637175 | None:intergenic | 30.0% | |
| !! | GCCAACTTTTGAAGAAATTA+AGG | + | chr7_4:637334-637353 | Msa1134230:CDS | 30.0% |
| ! | AAATACACTCTGCATCTTTT+CGG | + | chr7_4:637491-637510 | Msa1134230:intron | 30.0% |
| CTAATCATGAATTATGTGGA+GGG | + | chr7_4:637613-637632 | Msa1134230:intron | 30.0% | |
| TATAGTTAGTTCAAACCAAC+AGG | - | chr7_4:637665-637684 | None:intergenic | 30.0% | |
| CCATATTTATTGTACACATC+AGG | - | chr7_4:638047-638066 | None:intergenic | 30.0% | |
| CCTGATGTGTACAATAAATA+TGG | + | chr7_4:638044-638063 | Msa1134230:CDS | 30.0% | |
| TACAATAAATATGGTGCAGA+TGG | + | chr7_4:638053-638072 | Msa1134230:CDS | 30.0% | |
| !!! | TATTTTAATTCTCAGAGTCC+GGG | - | chr7_4:638108-638127 | None:intergenic | 30.0% |
| ! | TTCTCTTAAATTTGTTCAGC+TGG | - | chr7_4:638190-638209 | None:intergenic | 30.0% |
| GATGGTTTATTCATGTTTAC+TGG | + | chr7_4:638213-638232 | Msa1134230:intron | 30.0% | |
| CCATAGTATGAAATCATTCA+TGG | - | chr7_4:638274-638293 | None:intergenic | 30.0% | |
| CCATGAATGATTTCATACTA+TGG | + | chr7_4:638271-638290 | Msa1134230:intron | 30.0% | |
| AATATGCATAACTGCAACAT+GGG | - | chr7_4:638480-638499 | None:intergenic | 30.0% | |
| AAATATGCATAACTGCAACA+TGG | - | chr7_4:638481-638500 | None:intergenic | 30.0% | |
| ATGGAATAGGAAATCATGTT+TGG | - | chr7_4:638585-638604 | None:intergenic | 30.0% | |
| GTATTGTGAGAAAATGGAAT+AGG | - | chr7_4:638598-638617 | None:intergenic | 30.0% | |
| !!! | CATCATCCAATAGTTTTTTG+AGG | - | chr7_4:638786-638805 | None:intergenic | 30.0% |
| !! | GCTAGATTTTAATGACAGAA+TGG | + | chr7_4:638831-638850 | Msa1134230:CDS | 30.0% |
| !! | TAAAGCGTTTTCCTTCTATT+TGG | - | chr7_4:639097-639116 | None:intergenic | 30.0% |
| ! | TCTTTAAAGATACAGCACAT+AGG | + | chr7_4:639145-639164 | Msa1134230:intron | 30.0% |
| CCATGAATAAACGTCAAATA+AGG | - | chr7_4:639187-639206 | None:intergenic | 30.0% | |
| ! | CCTTATTTGACGTTTATTCA+TGG | + | chr7_4:639184-639203 | Msa1134230:intron | 30.0% |
| TTGGACTGTTATGAAAAGTT+GGG | - | chr7_4:639218-639237 | None:intergenic | 30.0% | |
| ATTGGACTGTTATGAAAAGT+TGG | - | chr7_4:639219-639238 | None:intergenic | 30.0% | |
| ATTATTCTTTGTTCCCGTTT+GGG | + | chr7_4:639240-639259 | Msa1134230:intron | 30.0% | |
| AATAACTACTAAGCACCTAA+AGG | - | chr7_4:639314-639333 | None:intergenic | 30.0% | |
| ! | TTGGTAATAAATTCCACCAA+GGG | - | chr7_4:639372-639391 | None:intergenic | 30.0% |
| ! | ATTGGTAATAAATTCCACCA+AGG | - | chr7_4:639373-639392 | None:intergenic | 30.0% |
| TCAGTTGTATGATAAACTTG+TGG | + | chr7_4:639405-639424 | Msa1134230:intron | 30.0% | |
| TAGTTACTAGTCCAAAATTG+TGG | - | chr7_4:639450-639469 | None:intergenic | 30.0% | |
| ATCACATCATTACTTAGCAT+GGG | - | chr7_4:639513-639532 | None:intergenic | 30.0% | |
| ! | GTCAGGGAATTTTCTTATAT+TGG | + | chr7_4:639556-639575 | Msa1134230:intron | 30.0% |
| TTAGGAACTACAAGCATAAA+TGG | + | chr7_4:639739-639758 | Msa1134230:three_prime_UTR | 30.0% | |
| TAGGAACTACAAGCATAAAT+GGG | + | chr7_4:639740-639759 | Msa1134230:three_prime_UTR | 30.0% | |
| !!! | GAAATTTTCGAGTCATAAGA+AGG | - | chr7_4:639903-639922 | None:intergenic | 30.0% |
| AAGATACTTGTACATCTGTA+AGG | + | chr7_4:639993-640012 | Msa1134230:three_prime_UTR | 30.0% | |
| AGATACTTGTACATCTGTAA+GGG | + | chr7_4:639994-640013 | Msa1134230:three_prime_UTR | 30.0% | |
| AAGAAAATGATGTACGGAAG+TGG | - | chr7_4:634248-634267 | None:intergenic | 35.0% | |
| AAGGGGAAGAAAATGATGTA+CGG | - | chr7_4:634254-634273 | None:intergenic | 35.0% | |
| TTTCCGTTATGTTTCACAAG+CGG | + | chr7_4:634441-634460 | Msa1134230:CDS | 35.0% | |
| AAACCGCTTGTGAAACATAA+CGG | - | chr7_4:634447-634466 | None:intergenic | 35.0% | |
| TAAGACAAATAGCCTGTATC+AGG | - | chr7_4:634498-634517 | None:intergenic | 35.0% | |
| GATACAGGCTATTTGTCTTA+CGG | + | chr7_4:634498-634517 | Msa1134230:CDS | 35.0% | |
| ! | CGTCTTATTACTCAATCTGT+TGG | + | chr7_4:634540-634559 | Msa1134230:CDS | 35.0% |
| TCTGTTGGAATTCCTGTTAT+TGG | + | chr7_4:634555-634574 | Msa1134230:CDS | 35.0% | |
| TTATCAGCATCACCAATAAC+AGG | - | chr7_4:634570-634589 | None:intergenic | 35.0% | |
| !! | GTTATTGGTGATGCTGATAA+TGG | + | chr7_4:634570-634589 | Msa1134230:CDS | 35.0% |
| GTTAAGGGTTATGTTAATGC+TGG | + | chr7_4:634624-634643 | Msa1134230:intron | 35.0% | |
| ! | TTTTGCTGCTATCATTCTTG+AGG | + | chr7_4:634647-634666 | Msa1134230:intron | 35.0% |
| ! | ATTTGTGAAGGTGGTGTTTT+AGG | + | chr7_4:634734-634753 | Msa1134230:intron | 35.0% |
| TTGTATCATTCTCGAAGATC+AGG | + | chr7_4:634890-634909 | Msa1134230:intron | 35.0% | |
| ATGCATCAAATCATGATGTG+TGG | + | chr7_4:634964-634983 | Msa1134230:intron | 35.0% | |
| TTAGGTGCTTGAAATTGTTG+TGG | + | chr7_4:635107-635126 | Msa1134230:intron | 35.0% | |
| !! | GTTTTTCGGTTGGTATTTGT+AGG | + | chr7_4:635200-635219 | Msa1134230:intron | 35.0% |
| GAAACTGAGTGAATAATGTC+GGG | + | chr7_4:635263-635282 | Msa1134230:intron | 35.0% | |
| AAACTGAGTGAATAATGTCG+GGG | + | chr7_4:635264-635283 | Msa1134230:intron | 35.0% | |
| CAAGGTTACTACAACATACT+TGG | + | chr7_4:635348-635367 | Msa1134230:intron | 35.0% | |
| CTAACGAAAGACACATGTAA+GGG | - | chr7_4:635399-635418 | None:intergenic | 35.0% | |
| ACTAACGAAAGACACATGTA+AGG | - | chr7_4:635400-635419 | None:intergenic | 35.0% | |
| TTCATCACCTAACCTACATA+CGG | - | chr7_4:635447-635466 | None:intergenic | 35.0% | |
| CGAAACTGAGTGAATAATGT+CGG | + | chr7_4:635469-635488 | Msa1134230:intron | 35.0% | |
| GACTAAAGGGATCAAAACAA+TGG | + | chr7_4:635755-635774 | Msa1134230:intron | 35.0% | |
| !!! | CATTTTGCTGTTTCATTGCT+AGG | + | chr7_4:635968-635987 | Msa1134230:intron | 35.0% |
| TGGATCTGATATTGTGATTG+TGG | + | chr7_4:636091-636110 | Msa1134230:CDS | 35.0% | |
| TTCTCCTCTTGTTCCAAAAA+TGG | + | chr7_4:636250-636269 | Msa1134230:CDS | 35.0% | |
| !!! | CATACCATTTTTGGAACAAG+AGG | - | chr7_4:636257-636276 | None:intergenic | 35.0% |
| AGAAACTCCAATCAAGGAAA+GGG | - | chr7_4:636446-636465 | None:intergenic | 35.0% | |
| TAGAAACTCCAATCAAGGAA+AGG | - | chr7_4:636447-636466 | None:intergenic | 35.0% | |
| TCGTATAGAAACTCCAATCA+AGG | - | chr7_4:636452-636471 | None:intergenic | 35.0% | |
| TATCAAGGTTAAAGAAAGGG+AGG | - | chr7_4:636493-636512 | None:intergenic | 35.0% | |
| ATTTCACCTATGCTGGAATT+GGG | - | chr7_4:636634-636653 | None:intergenic | 35.0% | |
| ! | TATCAAGCTAACCAGTGTTT+TGG | - | chr7_4:636660-636679 | None:intergenic | 35.0% |
| AATGTATTACTGCGATAGCT+AGG | - | chr7_4:636685-636704 | None:intergenic | 35.0% | |
| GCAAAACAATATCCAAGAAC+TGG | + | chr7_4:636707-636726 | Msa1134230:intron | 35.0% | |
| TTGAAAACAGAACCAGTTCT+TGG | - | chr7_4:636722-636741 | None:intergenic | 35.0% | |
| TTTGTTTCCTATACTGCTCA+TGG | - | chr7_4:636854-636873 | None:intergenic | 35.0% | |
| ! | AATTTCATTCTGGGGAAAAG+TGG | - | chr7_4:636901-636920 | None:intergenic | 35.0% |
| ATTAGCAGAAGTAACATCCT+AGG | - | chr7_4:636947-636966 | None:intergenic | 35.0% | |
| TATGGCAGATCCATTTCAAA+TGG | + | chr7_4:637029-637048 | Msa1134230:intron | 35.0% | |
| ! | AATACACTCTGCATCTTTTC+GGG | + | chr7_4:637492-637511 | Msa1134230:intron | 35.0% |
| TTACTACCATAAAGGCTTGT+TGG | + | chr7_4:637568-637587 | Msa1134230:intron | 35.0% | |
| TCGGCTAATCATGAATTATG+TGG | + | chr7_4:637609-637628 | Msa1134230:intron | 35.0% | |
| GCTAATCATGAATTATGTGG+AGG | + | chr7_4:637612-637631 | Msa1134230:intron | 35.0% | |
| ! | CTTTCTGGAGAAAACTGAAA+AGG | - | chr7_4:637641-637660 | None:intergenic | 35.0% |
| ! | CTTTTCAGTTTTCTCCAGAA+AGG | + | chr7_4:637639-637658 | Msa1134230:intron | 35.0% |
| ! | GGTGTTATAACTTCCACAAT+GGG | - | chr7_4:638026-638045 | None:intergenic | 35.0% |
| ! | AGGTGTTATAACTTCCACAA+TGG | - | chr7_4:638027-638046 | None:intergenic | 35.0% |
| TGTGATCACTTACAGGAATA+CGG | - | chr7_4:638163-638182 | None:intergenic | 35.0% | |
| ! | ATGCTGTGAGCATTCTTTTA+TGG | + | chr7_4:638299-638318 | Msa1134230:intron | 35.0% |
| ATATGCATAACTGCAACATG+GGG | - | chr7_4:638479-638498 | None:intergenic | 35.0% | |
| ! | ATACTTTGCTATATACAGGC+TGG | + | chr7_4:638620-638639 | Msa1134230:intron | 35.0% |
| !! | TTATAAATGGCAAGAGTACC+AGG | - | chr7_4:638674-638693 | None:intergenic | 35.0% |
| TTACAACTCTATGCAGCTTT+GGG | + | chr7_4:638751-638770 | Msa1134230:intron | 35.0% | |
| GGTCAACCTCAAAAAACTAT+TGG | + | chr7_4:638777-638796 | Msa1134230:CDS | 35.0% | |
| TGACAGGATTCAAGTATTTC+TGG | + | chr7_4:638855-638874 | Msa1134230:CDS | 35.0% | |
| AGTTGAGAGAAAATTACCCT+TGG | - | chr7_4:638907-638926 | None:intergenic | 35.0% | |
| TCAATTAAGCTTATGTGAGG+TGG | + | chr7_4:639044-639063 | Msa1134230:intron | 35.0% | |
| CAATTAAGCTTATGTGAGGT+GGG | + | chr7_4:639045-639064 | Msa1134230:intron | 35.0% | |
| AATTAAGCTTATGTGAGGTG+GGG | + | chr7_4:639046-639065 | Msa1134230:intron | 35.0% | |
| CTGTTATGAAAAGTTGGGTA+AGG | - | chr7_4:639213-639232 | None:intergenic | 35.0% | |
| CGGGAACAAAGAATAATGAT+TGG | - | chr7_4:639237-639256 | None:intergenic | 35.0% | |
| CATTATTCTTTGTTCCCGTT+TGG | + | chr7_4:639239-639258 | Msa1134230:intron | 35.0% | |
| TTATTCTTTGTTCCCGTTTG+GGG | + | chr7_4:639241-639260 | Msa1134230:intron | 35.0% | |
| AAAATATCACAACCCCCAAA+CGG | - | chr7_4:639257-639276 | None:intergenic | 35.0% | |
| TAGATATTTCGTCAGCCTTT+AGG | + | chr7_4:639296-639315 | Msa1134230:intron | 35.0% | |
| ! | AACTGATCTTTAGGAGAGAT+TGG | - | chr7_4:639391-639410 | None:intergenic | 35.0% |
| ! | AGCTTGTGTAACCACAATTT+TGG | + | chr7_4:639436-639455 | Msa1134230:intron | 35.0% |
| ! | CAAATTTGGCTATGGTGTTA+CGG | - | chr7_4:639473-639492 | None:intergenic | 35.0% |
| AACACCATAGCCAAATTTGA+AGG | + | chr7_4:639474-639493 | Msa1134230:intron | 35.0% | |
| ACACCATAGCCAAATTTGAA+GGG | + | chr7_4:639475-639494 | Msa1134230:intron | 35.0% | |
| TCTCTAACTCCCTTCAAATT+TGG | - | chr7_4:639487-639506 | None:intergenic | 35.0% | |
| CATCACATCATTACTTAGCA+TGG | - | chr7_4:639514-639533 | None:intergenic | 35.0% | |
| CATGCTAAGTAATGATGTGA+TGG | + | chr7_4:639512-639531 | Msa1134230:intron | 35.0% | |
| ACTTCCTATAGTATCATGTC+AGG | + | chr7_4:639539-639558 | Msa1134230:intron | 35.0% | |
| CTTCCTATAGTATCATGTCA+GGG | + | chr7_4:639540-639559 | Msa1134230:intron | 35.0% | |
| ATTCCCTGACATGATACTAT+AGG | - | chr7_4:639546-639565 | None:intergenic | 35.0% | |
| TCCAGGAAATTTATAGCTCA+TGG | + | chr7_4:639592-639611 | Msa1134230:intron | 35.0% | |
| ACCATGAGCTATAAATTTCC+TGG | - | chr7_4:639596-639615 | None:intergenic | 35.0% | |
| ! | TTTATAGCTCATGGTGATGA+AGG | + | chr7_4:639601-639620 | Msa1134230:three_prime_UTR | 35.0% |
| ! | CTGGTTCTTTATTTGGTATG+TGG | - | chr7_4:639714-639733 | None:intergenic | 35.0% |
| CTTGTAGTTCCTAACTTAAC+TGG | - | chr7_4:639733-639752 | None:intergenic | 35.0% | |
| ACTACCATGGAAAGGATATA+GGG | - | chr7_4:639857-639876 | None:intergenic | 35.0% | |
| AACTACCATGGAAAGGATAT+AGG | - | chr7_4:639858-639877 | None:intergenic | 35.0% | |
| !! | ATTCTGGCTTAAAACTCTGA+AGG | - | chr7_4:640066-640085 | None:intergenic | 35.0% |
| AAAATGATGTACGGAAGTGG+TGG | - | chr7_4:634245-634264 | None:intergenic | 40.0% | |
| ! | GAAACATAACGGAAATCCAG+CGG | - | chr7_4:634436-634455 | None:intergenic | 40.0% |
| TTCTATCTCTGCTTCTCGAT+TGG | + | chr7_4:634467-634486 | Msa1134230:CDS | 40.0% | |
| TCTATCTCTGCTTCTCGATT+GGG | + | chr7_4:634468-634487 | Msa1134230:CDS | 40.0% | |
| !! | GGTGATGCTGATAATGGTTA+TGG | + | chr7_4:634576-634595 | Msa1134230:CDS | 40.0% |
| TGCTATCATTCTTGAGGATC+AGG | + | chr7_4:634653-634672 | Msa1134230:intron | 40.0% | |
| !! | GGTTAGCCAAGGATTTTAGT+TGG | + | chr7_4:634674-634693 | Msa1134230:intron | 40.0% |
| TGTGTGGATATTTGTGAAGG+TGG | + | chr7_4:634725-634744 | Msa1134230:intron | 40.0% | |
| AGATCATTGAATGTGTGAGG+TGG | + | chr7_4:635301-635320 | Msa1134230:intron | 40.0% | |
| !! | GTGGTGTTACTATAGTCTCT+GGG | + | chr7_4:635320-635339 | Msa1134230:intron | 40.0% |
| TATAGTCTCTGGGTGTATCA+AGG | + | chr7_4:635330-635349 | Msa1134230:intron | 40.0% | |
| TTGATACACCCAGAGATTCT+AGG | - | chr7_4:635568-635587 | None:intergenic | 40.0% | |
| TTATGGACCAAACTGGCTAA+CGG | - | chr7_4:635683-635702 | None:intergenic | 40.0% | |
| TATTGACAATGTGGAGGACT+AGG | + | chr7_4:635812-635831 | Msa1134230:intron | 40.0% | |
| TGATACGGTTCAACAGTTTC+AGG | + | chr7_4:635836-635855 | Msa1134230:intron | 40.0% | |
| GATACGGTTCAACAGTTTCA+GGG | + | chr7_4:635837-635856 | Msa1134230:intron | 40.0% | |
| ATACGGTTCAACAGTTTCAG+GGG | + | chr7_4:635838-635857 | Msa1134230:intron | 40.0% | |
| ATCAGATCCACTCTCATTTC+TGG | - | chr7_4:636081-636100 | None:intergenic | 40.0% | |
| AAAAGCTTCCATCTCTTGTC+TGG | - | chr7_4:636222-636241 | None:intergenic | 40.0% | |
| AGTTCAAGAGGAGTGAGTAT+CGG | - | chr7_4:636391-636410 | None:intergenic | 40.0% | |
| ! | CCAATGTCTTCAAGTTCAAG+AGG | - | chr7_4:636403-636422 | None:intergenic | 40.0% |
| CCTCTTGAACTTGAAGACAT+TGG | + | chr7_4:636400-636419 | Msa1134230:CDS | 40.0% | |
| GAAACTCCAATCAAGGAAAG+GGG | - | chr7_4:636445-636464 | None:intergenic | 40.0% | |
| AGTTTCTATACGAGCAATGC+AGG | + | chr7_4:636459-636478 | Msa1134230:CDS | 40.0% | |
| TACTACAGAAAAGTGGCTCT+TGG | - | chr7_4:636572-636591 | None:intergenic | 40.0% | |
| CTCAGACTACTACAGAAAAG+TGG | - | chr7_4:636579-636598 | None:intergenic | 40.0% | |
| ATGATACCCAATTCCAGCAT+AGG | + | chr7_4:636625-636644 | Msa1134230:intron | 40.0% | |
| CATTTCACCTATGCTGGAAT+TGG | - | chr7_4:636635-636654 | None:intergenic | 40.0% | |
| TTGGTTCATTTCACCTATGC+TGG | - | chr7_4:636641-636660 | None:intergenic | 40.0% | |
| GGTGAAATGAACCAAAACAC+TGG | + | chr7_4:636646-636665 | Msa1134230:intron | 40.0% | |
| ACACAATCCATGAGCAGTAT+AGG | + | chr7_4:636844-636863 | Msa1134230:intron | 40.0% | |
| CATCACAAATCCTTAATGGC+AGG | + | chr7_4:637130-637149 | Msa1134230:intron | 40.0% | |
| ! | TCTCTTTGAAAGCAGCTGAT+CGG | - | chr7_4:637414-637433 | None:intergenic | 40.0% |
| AACTATCGAAGATCCCATTG+TGG | + | chr7_4:638010-638029 | Msa1134230:CDS | 40.0% | |
| AATATGGTGCAGATGGTTCA+AGG | + | chr7_4:638060-638079 | Msa1134230:CDS | 40.0% | |
| ATATGGTGCAGATGGTTCAA+GGG | + | chr7_4:638061-638080 | Msa1134230:CDS | 40.0% | |
| !! | TATGGAGTTCTGAAACATCG+TGG | + | chr7_4:638317-638336 | Msa1134230:intron | 40.0% |
| CTATATACAGGCTGGATTTC+TGG | + | chr7_4:638628-638647 | Msa1134230:intron | 40.0% | |
| GGAATCACAAACATAGTTCC+TGG | + | chr7_4:638653-638672 | Msa1134230:CDS | 40.0% | |
| GTTACAACTCTATGCAGCTT+TGG | + | chr7_4:638750-638769 | Msa1134230:intron | 40.0% | |
| ACTATTGGATGATGCAACAG+AGG | + | chr7_4:638792-638811 | Msa1134230:CDS | 40.0% | |
| ATGATGCAACAGAGGAAACT+GGG | + | chr7_4:638800-638819 | Msa1134230:CDS | 40.0% | |
| TTAATGACAGAATGGGTGAC+AGG | + | chr7_4:638839-638858 | Msa1134230:CDS | 40.0% | |
| TTGGAGTTGAGAAAGCAATG+TGG | - | chr7_4:638888-638907 | None:intergenic | 40.0% | |
| ACATTGCTTTCTCAACTCCA+AGG | + | chr7_4:638887-638906 | Msa1134230:three_prime_UTR | 40.0% | |
| CATTGCTTTCTCAACTCCAA+GGG | + | chr7_4:638888-638907 | Msa1134230:three_prime_UTR | 40.0% | |
| ATTAAGCTTATGTGAGGTGG+GGG | + | chr7_4:639047-639066 | Msa1134230:intron | 40.0% | |
| !! | AGAGAGCTCTGAGATTCTTT+GGG | - | chr7_4:639128-639147 | None:intergenic | 40.0% |
| !! | AAGAGAGCTCTGAGATTCTT+TGG | - | chr7_4:639129-639148 | None:intergenic | 40.0% |
| TATTCTTTGTTCCCGTTTGG+GGG | + | chr7_4:639242-639261 | Msa1134230:intron | 40.0% | |
| AAATATCACAACCCCCAAAC+GGG | - | chr7_4:639256-639275 | None:intergenic | 40.0% | |
| ! | GTTTGGGGGTTGTGATATTT+TGG | + | chr7_4:639256-639275 | Msa1134230:intron | 40.0% |
| AAGCTATATGATGTCTCCCT+TGG | + | chr7_4:639353-639372 | Msa1134230:intron | 40.0% | |
| ACTCCCTTCAAATTTGGCTA+TGG | - | chr7_4:639481-639500 | None:intergenic | 40.0% | |
| ACATCATTACTTAGCATGGG+TGG | - | chr7_4:639510-639529 | None:intergenic | 40.0% | |
| TTGGTTTATGATGCTGTTCC+AGG | + | chr7_4:639575-639594 | Msa1134230:intron | 40.0% | |
| ! | CTCATGGTGATGAAGGTAAT+TGG | + | chr7_4:639608-639627 | Msa1134230:three_prime_UTR | 40.0% |
| ! | ATGGTGATGAAGGTAATTGG+TGG | + | chr7_4:639611-639630 | Msa1134230:three_prime_UTR | 40.0% |
| AAGGTAATTGGTGGAAGCTA+TGG | + | chr7_4:639620-639639 | Msa1134230:three_prime_UTR | 40.0% | |
| ! | TATGGATTGAAGCCTAATCG+TGG | + | chr7_4:639638-639657 | Msa1134230:three_prime_UTR | 40.0% |
| CTACCATGGAAAGGATATAG+GGG | - | chr7_4:639856-639875 | None:intergenic | 40.0% | |
| TCTTGCGGCAATATATATGC+TGG | + | chr7_4:639877-639896 | Msa1134230:three_prime_UTR | 40.0% | |
| ACGAGATTGGAACTGGAAAG+GGG | - | chr7_4:634271-634290 | None:intergenic | 45.0% | |
| GACGAGATTGGAACTGGAAA+GGG | - | chr7_4:634272-634291 | None:intergenic | 45.0% | |
| CTTTCCAGTTCCAATCTCGT+CGG | + | chr7_4:634271-634290 | Msa1134230:CDS | 45.0% | |
| ! | GTTTAGAGTTCCGACGAGAT+TGG | - | chr7_4:634284-634303 | None:intergenic | 45.0% |
| ATTGTGATTGTGGCGCGTAT+TGG | - | chr7_4:634306-634325 | None:intergenic | 45.0% | |
| GATTCACCAGGACTTCATCA+AGG | + | chr7_4:634369-634388 | Msa1134230:CDS | 45.0% | |
| TCAAATCATGTCACGCTGTG+TGG | + | chr7_4:634709-634728 | Msa1134230:intron | 45.0% | |
| CGCTGTGTGGATATTTGTGA+AGG | + | chr7_4:634722-634741 | Msa1134230:intron | 45.0% | |
| ! | CTCGAAGATCAGGTTAGCTA+AGG | + | chr7_4:634900-634919 | Msa1134230:intron | 45.0% |
| !! | GGTGGTGTTACTATAGTCTC+TGG | + | chr7_4:635319-635338 | Msa1134230:intron | 45.0% |
| CATACGTGTCTTCCGTATGT+AGG | + | chr7_4:635432-635451 | Msa1134230:intron | 45.0% | |
| GTGTCTTCCGTATGTAGGTT+AGG | + | chr7_4:635437-635456 | Msa1134230:intron | 45.0% | |
| !! | TGTGGAGGACTAGGTTGATA+CGG | + | chr7_4:635821-635840 | Msa1134230:intron | 45.0% |
| ! | TAGGTATCTCCAAAAGCGTG+TGG | + | chr7_4:635987-636006 | Msa1134230:intron | 45.0% |
| ! | GAAAGTGGTATCGAGAGAAG+AGG | + | chr7_4:636025-636044 | Msa1134230:CDS | 45.0% |
| AGTCATGCGAATCAAAGCTG+CGG | + | chr7_4:636049-636068 | Msa1134230:CDS | 45.0% | |
| GTTGATGCCAGAAATGAGAG+TGG | + | chr7_4:636071-636090 | Msa1134230:CDS | 45.0% | |
| ! | CTCTTGATGAGGCACTCTAT+AGG | + | chr7_4:636141-636160 | Msa1134230:CDS | 45.0% |
| ! | ATGAGGCACTCTATAGGTCA+AGG | + | chr7_4:636147-636166 | Msa1134230:CDS | 45.0% |
| ! | TGAGGCACTCTATAGGTCAA+GGG | + | chr7_4:636148-636167 | Msa1134230:CDS | 45.0% |
| ACTTGCTTCCAGACAAGAGA+TGG | + | chr7_4:636211-636230 | Msa1134230:CDS | 45.0% | |
| GTGTAGGCCAATATGCTTGA+AGG | + | chr7_4:636352-636371 | Msa1134230:intron | 45.0% | |
| TAGGCCAATATGCTTGAAGG+AGG | + | chr7_4:636355-636374 | Msa1134230:intron | 45.0% | |
| TCCAATCAAGGAAAGGGGAT+AGG | - | chr7_4:636440-636459 | None:intergenic | 45.0% | |
| ATACGAGCAATGCAGGTACA+TGG | + | chr7_4:636466-636485 | Msa1134230:intron | 45.0% | |
| !! | AAAAGTGGACTGACACTGGT+TGG | - | chr7_4:636886-636905 | None:intergenic | 45.0% |
| AGACTAGAATAGATGCGCCT+AGG | + | chr7_4:636927-636946 | Msa1134230:intron | 45.0% | |
| ! | CTTACATTGGCCTGCCATTA+AGG | - | chr7_4:637143-637162 | None:intergenic | 45.0% |
| !! | GATGCGCTGACTGCTATTAA+AGG | + | chr7_4:637284-637303 | Msa1134230:CDS | 45.0% |
| TCAAAAGTTGGCATGCTTCC+TGG | - | chr7_4:637326-637345 | None:intergenic | 45.0% | |
| ! | GATCAGCTGCTTTCAAAGAG+AGG | + | chr7_4:637413-637432 | Msa1134230:CDS | 45.0% |
| ! | AGCTGCTTTCAAAGAGAGGT+TGG | + | chr7_4:637417-637436 | Msa1134230:intron | 45.0% |
| CCAAGTCCAACAAGCCTTTA+TGG | - | chr7_4:637577-637596 | None:intergenic | 45.0% | |
| !! | CCATAAAGGCTTGTTGGACT+TGG | + | chr7_4:637574-637593 | Msa1134230:intron | 45.0% |
| !! | TAAAGGCTTGTTGGACTTGG+TGG | + | chr7_4:637577-637596 | Msa1134230:intron | 45.0% |
| !! | AAAGGCTTGTTGGACTTGGT+GGG | + | chr7_4:637578-637597 | Msa1134230:intron | 45.0% |
| ! | TTTTCTCCAGAAAGGCCTGT+TGG | + | chr7_4:637647-637666 | Msa1134230:intron | 45.0% |
| TTCAAACCAACAGGCCTTTC+TGG | - | chr7_4:637656-637675 | None:intergenic | 45.0% | |
| GGGACCAGATTCCAGTAAAA+GGG | - | chr7_4:638088-638107 | None:intergenic | 45.0% | |
| ! | CTTTTACTGGAATCTGGTCC+CGG | + | chr7_4:638087-638106 | Msa1134230:CDS | 45.0% |
| ! | TGGAGAGTGTGATCACTTAC+AGG | - | chr7_4:638170-638189 | None:intergenic | 45.0% |
| AGCCTCTTATGCAAGCAATG+TGG | + | chr7_4:638439-638458 | Msa1134230:intron | 45.0% | |
| TAACTGCAACATGGGGTGAA+AGG | - | chr7_4:638472-638491 | None:intergenic | 45.0% | |
| ! | ATACAGGCTGGATTTCTGGA+TGG | + | chr7_4:638632-638651 | Msa1134230:intron | 45.0% |
| !! | AACTCTATGCAGCTTTGGGT+GGG | + | chr7_4:638755-638774 | Msa1134230:intron | 45.0% |
| GATGATGCAACAGAGGAAAC+TGG | + | chr7_4:638799-638818 | Msa1134230:CDS | 45.0% | |
| TGATGCAACAGAGGAAACTG+GGG | + | chr7_4:638801-638820 | Msa1134230:CDS | 45.0% | |
| TTAAGCTTATGTGAGGTGGG+GGG | + | chr7_4:639048-639067 | Msa1134230:intron | 45.0% | |
| CTATATGATGTCTCCCTTGG+TGG | + | chr7_4:639356-639375 | Msa1134230:intron | 45.0% | |
| ACACCCCTATATCCTTTCCA+TGG | + | chr7_4:639850-639869 | Msa1134230:three_prime_UTR | 45.0% | |
| CCTTTCCATGGTAGTTCTTG+CGG | + | chr7_4:639862-639881 | Msa1134230:three_prime_UTR | 45.0% | |
| TATTGCCGCAAGAACTACCA+TGG | - | chr7_4:639870-639889 | None:intergenic | 45.0% | |
| !! | GAATAAAATAAAATAAAATA+AGG | - | chr7_4:639940-639959 | None:intergenic | 5.0% |
| CGACGAGATTGGAACTGGAA+AGG | - | chr7_4:634273-634292 | None:intergenic | 50.0% | |
| AGTTCCGACGAGATTGGAAC+TGG | - | chr7_4:634278-634297 | None:intergenic | 50.0% | |
| CGCGAAATTCTCGATTCACC+AGG | + | chr7_4:634357-634376 | Msa1134230:CDS | 50.0% | |
| GCAAATCTCGTTCAATCCGC+TGG | + | chr7_4:634417-634436 | Msa1134230:CDS | 50.0% | |
| CGATTGGGATTGCCTGATAC+AGG | + | chr7_4:634483-634502 | Msa1134230:CDS | 50.0% | |
| TACGGCGAAATCGTCGAACA+AGG | + | chr7_4:634516-634535 | Msa1134230:CDS | 50.0% | |
| ! | CTTGAGGATCAGGTTAGCCA+AGG | + | chr7_4:634663-634682 | Msa1134230:intron | 50.0% |
| GTGTCTTCCGTTAGCCAGTT+TGG | + | chr7_4:635673-635692 | Msa1134230:intron | 50.0% | |
| ! | TGTGTGTGACCACACGCTTT+TGG | - | chr7_4:635999-636018 | None:intergenic | 50.0% |
| ! | AAAAGCGTGTGGTCACACAC+AGG | + | chr7_4:635998-636017 | Msa1134230:CDS | 50.0% |
| AAAGCGTGTGGTCACACACA+GGG | + | chr7_4:635999-636018 | Msa1134230:CDS | 50.0% | |
| GAGTGCCTCATCAAGAGACA+GGG | - | chr7_4:636138-636157 | None:intergenic | 50.0% | |
| ! | AGAGTGCCTCATCAAGAGAC+AGG | - | chr7_4:636139-636158 | None:intergenic | 50.0% |
| !! | TCAAGGGCATTTGCTGATGC+TGG | + | chr7_4:636164-636183 | Msa1134230:CDS | 50.0% |
| GCCAATATGCTTGAAGGAGG+AGG | + | chr7_4:636358-636377 | Msa1134230:CDS | 50.0% | |
| GCCTCCTCCTTCAAGCATAT+TGG | - | chr7_4:636362-636381 | None:intergenic | 50.0% | |
| GCCTATCCCCTTTCCTTGAT+TGG | + | chr7_4:636436-636455 | Msa1134230:CDS | 50.0% | |
| !! | GCGCTGACTGCTATTAAAGG+AGG | + | chr7_4:637287-637306 | Msa1134230:CDS | 50.0% |
| AAAGTTGGCATGCTTCCTGG+AGG | - | chr7_4:637323-637342 | None:intergenic | 50.0% | |
| ! | GGTTCAAGGGACCCTTTTAC+TGG | + | chr7_4:638074-638093 | Msa1134230:CDS | 50.0% |
| ! | GGGACCCTTTTACTGGAATC+TGG | + | chr7_4:638081-638100 | Msa1134230:CDS | 50.0% |
| CGGGACCAGATTCCAGTAAA+AGG | - | chr7_4:638089-638108 | None:intergenic | 50.0% | |
| CGCCACATTGCTTGCATAAG+AGG | - | chr7_4:638444-638463 | None:intergenic | 50.0% | |
| !! | CAACTCTATGCAGCTTTGGG+TGG | + | chr7_4:638754-638773 | Msa1134230:intron | 50.0% |
| !! | ACTCTATGCAGCTTTGGGTG+GGG | + | chr7_4:638756-638775 | Msa1134230:intron | 50.0% |
| GATGCAACAGAGGAAACTGG+GGG | + | chr7_4:638802-638821 | Msa1134230:CDS | 50.0% | |
| CATGCTGTTGTGCCACGATT+AGG | - | chr7_4:639653-639672 | None:intergenic | 50.0% | |
| CTAATCGTGGCACAACAGCA+TGG | + | chr7_4:639651-639670 | Msa1134230:three_prime_UTR | 50.0% | |
| !! | GGATATAGGGGTGTCTCCAT+GGG | - | chr7_4:639844-639863 | None:intergenic | 50.0% |
| !! | AGGATATAGGGGTGTCTCCA+TGG | - | chr7_4:639845-639864 | None:intergenic | 50.0% |
| CCGCAAGAACTACCATGGAA+AGG | - | chr7_4:639865-639884 | None:intergenic | 50.0% | |
| ATGAGCTGCTCCGCCACAAT+TGG | + | chr7_4:634177-634196 | Msa1134230:CDS | 55.0% | |
| ! | GTACGGAAGTGGTGGAGATG+AGG | - | chr7_4:634237-634256 | None:intergenic | 55.0% |
| GCTGGACCTTGATGAAGTCC+TGG | - | chr7_4:634378-634397 | None:intergenic | 55.0% | |
| CTGAGTGCGTCGAAACATGC+TGG | - | chr7_4:634396-634415 | None:intergenic | 55.0% | |
| AAGCGTGTGGTCACACACAG+GGG | + | chr7_4:636000-636019 | Msa1134230:CDS | 55.0% | |
| TCACACACAGGGGAGGAAAG+TGG | + | chr7_4:636010-636029 | Msa1134230:CDS | 55.0% | |
| CCTCATCAAGAGACAGGGCT+TGG | - | chr7_4:636133-636152 | None:intergenic | 55.0% | |
| CCAAGCCCTGTCTCTTGATG+AGG | + | chr7_4:636130-636149 | Msa1134230:CDS | 55.0% | |
| ! | GTGGACTGACACTGGTTGGA+TGG | - | chr7_4:636882-636901 | None:intergenic | 55.0% |
| !! | GGGGAAAAGTGGACTGACAC+TGG | - | chr7_4:636890-636909 | None:intergenic | 55.0% |
| !! | GCTTGTTGGACTTGGTGGGA+GGG | + | chr7_4:637582-637601 | Msa1134230:intron | 55.0% |
| !! | CTTGTTGGACTTGGTGGGAG+GGG | + | chr7_4:637583-637602 | Msa1134230:intron | 55.0% |
| !! | TTGTTGGACTTGGTGGGAGG+GGG | + | chr7_4:637584-637603 | Msa1134230:intron | 55.0% |
| GGAGGTCGTATTCCTCCTCC+AGG | + | chr7_4:637305-637324 | Msa1134230:CDS | 60.0% | |
| GTTGGCATGCTTCCTGGAGG+AGG | - | chr7_4:637320-637339 | None:intergenic | 60.0% | |
| !! | GGCTTGTTGGACTTGGTGGG+AGG | + | chr7_4:637581-637600 | Msa1134230:intron | 60.0% |
| !! | TGTTGGACTTGGTGGGAGGG+GGG | + | chr7_4:637585-637604 | Msa1134230:intron | 60.0% |
| AGCTTATGTGAGGTGGGGGG+TGG | + | chr7_4:639051-639070 | Msa1134230:intron | 60.0% | |
| ATGTGAGGTGGGGGGTGGAA+AGG | + | chr7_4:639056-639075 | Msa1134230:intron | 60.0% | |
| AGGAACGCAACCGCCACCAG+GGG | - | chr7_4:634217-634236 | None:intergenic | 65.0% | |
| GAGGAACGCAACCGCCACCA+GGG | - | chr7_4:634218-634237 | None:intergenic | 65.0% | |
| TGAGGAACGCAACCGCCACC+AGG | - | chr7_4:634219-634238 | None:intergenic | 65.0% | |
| CGTGTGGTCACACACAGGGG+AGG | + | chr7_4:636003-636022 | Msa1134230:CDS | 65.0% | |
| AGACAGGGCTTGGCGCGCAT+CGG | - | chr7_4:636123-636142 | None:intergenic | 65.0% | |
| !! | GTTGGACTTGGTGGGAGGGG+GGG | + | chr7_4:637586-637605 | Msa1134230:intron | 65.0% |
| TCCGCCACAATTGGCCGCGC+CGG | + | chr7_4:634186-634205 | Msa1134230:CDS | 70.0% | |
| AACGCAACCGCCACCAGGGG+TGG | - | chr7_4:634214-634233 | None:intergenic | 70.0% | |
| !! | GACTTGGTGGGAGGGGGGGT+CGG | + | chr7_4:637590-637609 | Msa1134230:intron | 70.0% |
| GCCGGCGCGGCCAATTGTGG+CGG | - | chr7_4:634190-634209 | None:intergenic | 75.0% | |
| !!! | GGCGCCGGCGCGGCCAATTG+TGG | - | chr7_4:634193-634212 | None:intergenic | 80.0% |
| ! | ACCGCCACCAGGGGTGGCGC+CGG | - | chr7_4:634208-634227 | None:intergenic | 80.0% |
| !!! | CACCAGGGGTGGCGCCGGCG+CGG | - | chr7_4:634203-634222 | None:intergenic | 85.0% |
| ! | GCCGGCGCCACCCCTGGTGG+CGG | + | chr7_4:634204-634223 | Msa1134230:CDS | 85.0% |
| !! | CGCGCCGGCGCCACCCCTGG+TGG | + | chr7_4:634201-634220 | Msa1134230:CDS | 90.0% |
| !! | GGCCGCGCCGGCGCCACCCC+TGG | + | chr7_4:634198-634217 | Msa1134230:CDS | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 634177 | 640098 | 634177 | ID=Msa1134230;Name=Msa1134230 |
| chr7_4 | mRNA | 634177 | 640098 | 634177 | ID=Msa1134230-mRNA-1;Parent=Msa1134230;Name=Msa1134230-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.85|0.87|1|0.85|0.87|8|529|462 |
| chr7_4 | exon | 634177 | 634635 | 634177 | ID=Msa1134230-mRNA-1:exon:207;Parent=Msa1134230-mRNA-1 |
| chr7_4 | exon | 635990 | 636271 | 635990 | ID=Msa1134230-mRNA-1:exon:208;Parent=Msa1134230-mRNA-1 |
| chr7_4 | exon | 636358 | 636480 | 636358 | ID=Msa1134230-mRNA-1:exon:209;Parent=Msa1134230-mRNA-1 |
| chr7_4 | exon | 637284 | 637434 | 637284 | ID=Msa1134230-mRNA-1:exon:210;Parent=Msa1134230-mRNA-1 |
| chr7_4 | exon | 637949 | 638169 | 637949 | ID=Msa1134230-mRNA-1:exon:211;Parent=Msa1134230-mRNA-1 |
| chr7_4 | exon | 638638 | 638674 | 638638 | ID=Msa1134230-mRNA-1:exon:212;Parent=Msa1134230-mRNA-1 |
| chr7_4 | exon | 638767 | 638909 | 638767 | ID=Msa1134230-mRNA-1:exon:213;Parent=Msa1134230-mRNA-1 |
| chr7_4 | exon | 639597 | 640098 | 639597 | ID=Msa1134230-mRNA-1:exon:214;Parent=Msa1134230-mRNA-1 |
| chr7_4 | CDS | 634177 | 634635 | 634177 | ID=Msa1134230-mRNA-1:cds;Parent=Msa1134230-mRNA-1 |
| chr7_4 | CDS | 635990 | 636271 | 635990 | ID=Msa1134230-mRNA-1:cds;Parent=Msa1134230-mRNA-1 |
| chr7_4 | CDS | 636358 | 636480 | 636358 | ID=Msa1134230-mRNA-1:cds;Parent=Msa1134230-mRNA-1 |
| chr7_4 | CDS | 637284 | 637434 | 637284 | ID=Msa1134230-mRNA-1:cds;Parent=Msa1134230-mRNA-1 |
| chr7_4 | CDS | 637949 | 638169 | 637949 | ID=Msa1134230-mRNA-1:cds;Parent=Msa1134230-mRNA-1 |
| chr7_4 | CDS | 638638 | 638674 | 638638 | ID=Msa1134230-mRNA-1:cds;Parent=Msa1134230-mRNA-1 |
| chr7_4 | CDS | 638767 | 638882 | 638767 | ID=Msa1134230-mRNA-1:cds;Parent=Msa1134230-mRNA-1 |
| chr7_4 | three_prime_UTR | 638883 | 638909 | 638883 | ID=Msa1134230-mRNA-1:three_prime_utr;Parent=Msa1134230-mRNA-1 |
| chr7_4 | three_prime_UTR | 639597 | 640098 | 639597 | ID=Msa1134230-mRNA-1:three_prime_utr;Parent=Msa1134230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
