AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1329660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329660 MtrunA17_Chr4g0066381 97.266 951 18 3 1 951 1 943 0.0 1902
Msa1329660 MtrunA17_Chr4g0066391 89.965 568 57 0 76 643 9 576 0.0 1075
Msa1329660 MtrunA17_Chr4g0066401 91.438 292 25 0 657 948 1 292 0.0 558
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329660 AT4G15530.1 78.178 944 193 5 9 948 18 952 0.0 1531
Msa1329660 AT4G15530.4 78.178 944 193 5 9 948 18 952 0.0 1531
Msa1329660 AT4G15530.6 78.178 944 193 5 9 948 25 959 0.0 1530
Msa1329660 AT4G15530.5 78.178 944 193 5 9 948 25 959 0.0 1530
Msa1329660 AT4G15530.2 82.759 870 149 1 79 948 3 871 0.0 1521
Msa1329660 AT4G15530.7 82.787 854 146 1 95 948 1 853 0.0 1490
Msa1329660 AT4G15530.3 82.787 854 146 1 95 948 1 853 0.0 1490

Find 258 sgRNAs with CRISPR-Local

Find 560 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACACCTGCCATTTCAATTT+TGG 0.082267 8_4:-48372513 Msa1329660:five_prime_UTR
ATCCATGGTGTTTGGTAATA+TGG 0.138638 8_4:-48368595 Msa1329660:CDS
GCTAATTCTAGTTGCTTCTT+TGG 0.182850 8_4:+48368717 None:intergenic
TGAGTTGACCCACACCTTTC+TGG 0.196040 8_4:+48364315 None:intergenic
TGGTAAGTTACCTTCAAATT+TGG 0.225158 8_4:+48364257 None:intergenic
ACTGGGGAAAAGAAACTTTA+TGG 0.240216 8_4:-48368528 Msa1329660:CDS
TGATGATAGGTGGTTGTAAT+TGG 0.242997 8_4:-48366590 Msa1329660:intron
TTTGTGGTGGGTGGTGTTAT+TGG 0.250091 8_4:+48372249 None:intergenic
TTGCATGCCGGATGCTTATA+AGG 0.266420 8_4:-48368264 Msa1329660:CDS
TATGACTATGCCTCTTACTA+TGG 0.274466 8_4:+48372452 None:intergenic
GACATCAAGTGAGTTTAATA+AGG 0.284688 8_4:-48365029 Msa1329660:CDS
ACTTTGTCCTTGTACTTAGA+TGG 0.289385 8_4:+48367569 None:intergenic
CACCATGGATTGAATGTTTA+CGG 0.295707 8_4:+48368608 None:intergenic
ATACCGTGTCTTGGTGTATT+TGG 0.297849 8_4:-48363551 Msa1329660:three_prime_UTR
TTATTGGAGTAAGGATAGTT+TGG 0.300149 8_4:+48372265 None:intergenic
TACTGTAACCAAATGTCATT+TGG 0.303402 8_4:+48364732 None:intergenic
AATGAAATGGAGGCCTTTCT+TGG 0.307194 8_4:-48370032 Msa1329660:CDS
TTCATGGTCTCTAAATCTTC+AGG 0.315798 8_4:+48368290 None:intergenic
ATGTCTCATGTTCACCATTC+AGG 0.321813 8_4:-48364054 Msa1329660:intron
ATACAGAGAGTGTTCACTTT+TGG 0.324769 8_4:-48370410 Msa1329660:intron
ACACATCAACATCAGATAAT+AGG 0.326515 8_4:-48372425 Msa1329660:CDS
ATTTGGGAACTTTCATGTCT+TGG 0.328110 8_4:-48366466 Msa1329660:CDS
ATAGTTTGGGCACGGATTAA+AGG 0.328392 8_4:+48372279 None:intergenic
TGTCTTGGGCTGATGAAATA+AGG 0.330420 8_4:-48366451 Msa1329660:CDS
ATGGACACAGTTCTTAATCT+TGG 0.333394 8_4:-48369269 Msa1329660:CDS
GGTAATATGGGAAATACTTC+AGG 0.336156 8_4:-48368582 Msa1329660:CDS
TCTAACAACCGGATTGTTAC+TGG 0.340369 8_4:+48365938 None:intergenic
GGGCTCTTCATTAAGCTATA+AGG 0.343387 8_4:-48364977 Msa1329660:CDS
CTAGCTGCTATTGCATCTTC+AGG 0.343456 8_4:+48366300 None:intergenic
TCCGGCTCTAAGCGATGATT+TGG 0.347002 8_4:-48366483 Msa1329660:CDS
TTTGGGAACTTTCATGTCTT+GGG 0.348932 8_4:-48366465 Msa1329660:CDS
CAAAACGGTGCGCAAGGAAT+TGG 0.349390 8_4:-48366276 Msa1329660:CDS
GGATATTGAGTTCACTGTTC+AGG 0.351127 8_4:-48368080 Msa1329660:CDS
ATCTTCAGGTGTCCTGATTC+CGG 0.351942 8_4:+48368304 None:intergenic
ACTGGTTTGCCTGCATCCCC+TGG 0.352559 8_4:-48367539 Msa1329660:CDS
AGACGTTTCTTAGACATGTT+TGG 0.353523 8_4:-48369179 Msa1329660:CDS
GCATCCCCTGGAGCTGCAGT+TGG 0.361008 8_4:-48367527 Msa1329660:CDS
TGGGGAAAGTGTTGTGTGTC+TGG 0.364893 8_4:-48366725 Msa1329660:CDS
CCCTGGAGCTGCAGTTGGGC+AGG 0.365744 8_4:-48367522 Msa1329660:CDS
TACAGTCCTTCCAGAGATAA+TGG 0.367046 8_4:-48365340 Msa1329660:CDS
GCCTGCATCTCAGTCAATTC+AGG 0.371622 8_4:+48365408 None:intergenic
TGCTTCAGATGAAAGGATAA+AGG 0.371733 8_4:-48366077 Msa1329660:CDS
TCAAATTATTGACAAATATG+AGG 0.372430 8_4:+48372592 None:intergenic
CGCAAGGAATTGGACTTTGC+AGG 0.375720 8_4:-48366266 Msa1329660:CDS
GACCTTACCCAAATGACATT+TGG 0.377792 8_4:-48364740 Msa1329660:CDS
AGGAGCATTAATCAGATAAC+TGG 0.379456 8_4:-48368645 Msa1329660:CDS
AGGATGTAGTTGCCGGAATC+AGG 0.380829 8_4:-48368316 Msa1329660:CDS
TAGATTTGTTGAAAATGAAA+TGG 0.382138 8_4:-48370045 Msa1329660:CDS
CTCCTATACTTATTAGCCCT+TGG 0.384153 8_4:+48368663 None:intergenic
AATACTTACCAAGGACTTCA+TGG 0.385011 8_4:+48370361 None:intergenic
CATCAAAATTTGCACAGAAA+AGG 0.387242 8_4:-48364294 Msa1329660:CDS
AGACAAGTCCAGAGGATGTC+GGG 0.387286 8_4:-48366823 Msa1329660:CDS
GATGATAGGTGGTTGTAATT+GGG 0.390892 8_4:-48366589 Msa1329660:intron
ATTTCATTTAAATCACCTTC+AGG 0.399860 8_4:+48365893 None:intergenic
ACCTGCCCAACTGCAGCTCC+AGG 0.399930 8_4:+48367521 None:intergenic
AACATTCAATCCATGGTGTT+TGG 0.400061 8_4:-48368603 Msa1329660:CDS
GGGAGCCAACTTAGCAGAAA+TGG 0.403069 8_4:-48370186 Msa1329660:CDS
GTTGCATTCTTTGCTCAACT+TGG 0.406680 8_4:-48364085 Msa1329660:CDS
CTCCTCCTCTCTGTGCGCTC+TGG 0.414979 8_4:-48369993 Msa1329660:CDS
TCCATGGTGTTTGGTAATAT+GGG 0.415863 8_4:-48368594 Msa1329660:CDS
TCCTATACTTATTAGCCCTT+GGG 0.421836 8_4:+48368664 None:intergenic
ATCAAAATTTGCACAGAAAA+GGG 0.422930 8_4:-48364293 Msa1329660:CDS
GGTTCCAAATGAAAAGAAAT+CGG 0.423220 8_4:+48364766 None:intergenic
TGTTGCCATTTCTGCTAAGT+TGG 0.425651 8_4:+48370181 None:intergenic
TTAGCAGAAATGGCAACAAT+TGG 0.428853 8_4:-48370176 Msa1329660:CDS
TTGAATGATGAAGTGGTTGC+TGG 0.429675 8_4:-48369245 Msa1329660:CDS
ACTATGGAACTAACCTCAAA+TGG 0.430135 8_4:+48364650 None:intergenic
CATCCCCTGGAGCTGCAGTT+GGG 0.430253 8_4:-48367526 Msa1329660:CDS
ATCTCCTCCCACAAACCATT+TGG 0.430655 8_4:+48370080 None:intergenic
GGCCGTGAGAATGATGATAT+TGG 0.430946 8_4:-48366056 Msa1329660:CDS
CATTCCACATTCATTGTTTG+AGG 0.433554 8_4:-48368971 Msa1329660:CDS
CTGCTGTTGTAGCCCGTGGA+TGG 0.437327 8_4:-48366745 Msa1329660:CDS
GATTTCCATGCCTGGAATGA+TGG 0.438634 8_4:-48369288 Msa1329660:CDS
TGCTGCTAAACCAAATTTGA+AGG 0.439110 8_4:-48364267 Msa1329660:intron
TATTGGAGTAAGGATAGTTT+GGG 0.441257 8_4:+48372266 None:intergenic
TCCTTGTGCATGCCATTGTT+CGG 0.441556 8_4:+48367478 None:intergenic
TCCACAGGTGAGGTGATACT+TGG 0.444321 8_4:-48366524 Msa1329660:CDS
ATGGGAAATACTTCAGGAAC+TGG 0.445089 8_4:-48368576 Msa1329660:CDS
TTCACTAGAAATCCAAGCAC+TGG 0.446965 8_4:-48368546 Msa1329660:CDS
ACTGGTGTGGAATTATATAT+AGG 0.448324 8_4:-48363518 Msa1329660:three_prime_UTR
ACTGTAACCAAATGTCATTT+GGG 0.448913 8_4:+48364733 None:intergenic
TTAATTGTAGTTGGGAGGAA+AGG 0.450313 8_4:-48370207 Msa1329660:intron
ACTGCAGCTCCAGGGGATGC+AGG 0.452972 8_4:+48367530 None:intergenic
TCAAAATCTGATCTTTGATA+AGG 0.453983 8_4:+48365989 None:intergenic
CTGGGGAAAAGAAACTTTAT+GGG 0.455760 8_4:-48368527 Msa1329660:CDS
GGAGTTTCTCATTAATGCTC+AGG 0.458500 8_4:-48368505 Msa1329660:intron
TGATGAAGTGGTTGCTGGGT+TGG 0.459454 8_4:-48369240 Msa1329660:CDS
ATGAAATGGAGGCCTTTCTT+GGG 0.459941 8_4:-48370031 Msa1329660:CDS
TAGGGAGAGGATGTAGTTGC+CGG 0.460223 8_4:-48368323 Msa1329660:CDS
GAATATGTGGAGAGCATGGC+GGG 0.461451 8_4:-48364120 Msa1329660:CDS
CTTCATGAATTTCTTCCTGA+AGG 0.463137 8_4:-48365908 Msa1329660:CDS
ATTGGTTTATCTGTGCCTCC+TGG 0.464909 8_4:-48370158 Msa1329660:CDS
GAGTGTCTACCTCGAAGCTA+AGG 0.466406 8_4:-48368857 Msa1329660:CDS
GCAGTTCCCCAAAATTGAAA+TGG 0.469807 8_4:+48372505 None:intergenic
GAGATGTCTTCCATAGTAAG+AGG 0.473678 8_4:-48372462 Msa1329660:CDS
GATTATCAGGTTGGAATATG+TGG 0.476611 8_4:-48364133 Msa1329660:intron
CCGGCTCTAAGCGATGATTT+GGG 0.476985 8_4:-48366482 Msa1329660:CDS
TGAGAAAGTGTTCTCTGAGA+TGG 0.479729 8_4:-48364998 Msa1329660:CDS
TCCTGAATTGACTGAGATGC+AGG 0.481091 8_4:-48365409 Msa1329660:CDS
TGCTGTTGTAGCCCGTGGAT+GGG 0.481959 8_4:-48366744 Msa1329660:CDS
AGAACTGTGTCCATCATTCC+AGG 0.483639 8_4:+48369278 None:intergenic
AAGAATGATGTTAGTGTTGG+TGG 0.484081 8_4:-48372387 Msa1329660:CDS
TATTATACTGTTTCTGTCAA+GGG 0.486470 8_4:-48363840 Msa1329660:three_prime_UTR
TCAAGTTCCTTATAAGCATC+CGG 0.489294 8_4:+48368257 None:intergenic
TTGTGGGAGGAGATACTTGA+AGG 0.489564 8_4:-48370071 Msa1329660:CDS
GGTGATTTAAATGAAATTGT+TGG 0.491174 8_4:-48365887 Msa1329660:CDS
AGTGGAAAACGTACTGGTAA+AGG 0.492046 8_4:-48368028 Msa1329660:CDS
TTATTATACTGTTTCTGTCA+AGG 0.492636 8_4:-48363841 Msa1329660:three_prime_UTR
GAAAAGCTAAAGTATTCAAA+AGG 0.493897 8_4:-48368940 Msa1329660:CDS
CTGCCCAACTGCAGCTCCAG+GGG 0.494906 8_4:+48367523 None:intergenic
ACGAGTGGAACCATTATCTC+TGG 0.495754 8_4:+48365330 None:intergenic
AGTGGAAGGAGTTGCAGTTA+CGG 0.497327 8_4:-48372344 Msa1329660:CDS
AGAACCTACCAAATGGTTTG+TGG 0.497544 8_4:-48370088 Msa1329660:CDS
TTTGAAGTTAATCCCATGCT+TGG 0.498251 8_4:-48365803 Msa1329660:CDS
AACCAGATCTTTGAGATCGT+TGG 0.499844 8_4:+48368891 None:intergenic
TAATTGTAGTTGGGAGGAAA+GGG 0.500634 8_4:-48370206 Msa1329660:intron
AGCCAACGATCTCAAAGATC+TGG 0.501318 8_4:-48368893 Msa1329660:CDS
TGAGGTGATACTTGGAAAGC+AGG 0.501601 8_4:-48366516 Msa1329660:CDS
TAGTAAGAGGCATAGTCATA+AGG 0.501956 8_4:-48372449 Msa1329660:CDS
ACGTAATATCAGAAGGAGAA+TGG 0.502501 8_4:-48366562 Msa1329660:CDS
AATCAAAATAGCTGTAGATA+TGG 0.503273 8_4:-48368002 Msa1329660:CDS
GCAAAGAATGCAACAGAAGA+AGG 0.504771 8_4:+48364094 None:intergenic
GGAGAATGGATCTCGTTGAA+TGG 0.505652 8_4:-48366548 Msa1329660:CDS
GAACCTACCAAATGGTTTGT+GGG 0.508102 8_4:-48370087 Msa1329660:CDS
TCCACTCGTCGGTACACCTC+AGG 0.509274 8_4:-48365316 Msa1329660:intron
TTTGCAGCATGATCCATTTG+AGG 0.509567 8_4:-48364663 Msa1329660:intron
CTTCCTACATACCTATCCGC+AGG 0.510814 8_4:-48364689 Msa1329660:CDS
TGGGTGGTGTTATTGGAGTA+AGG 0.511934 8_4:+48372256 None:intergenic
TCTGCAACTAGTGCAGCTCT+TGG 0.512618 8_4:+48364934 None:intergenic
CCAAGTAAACGACCATGAAA+AGG 0.515296 8_4:-48366690 Msa1329660:intron
CACAACACTTTCCCCATCCA+CGG 0.517943 8_4:+48366732 None:intergenic
AGCAGCTTGGAAAACGGCAC+GGG 0.518749 8_4:+48365386 None:intergenic
CTAACAACCGGATTGTTACT+GGG 0.520228 8_4:+48365939 None:intergenic
TCAATTCTTGGGATAGCCCA+AGG 0.520836 8_4:-48368680 Msa1329660:CDS
TGAATGATGAAGTGGTTGCT+GGG 0.521032 8_4:-48369244 Msa1329660:CDS
TTTGATTGCATACCGTGTCT+TGG 0.522782 8_4:-48363560 Msa1329660:three_prime_UTR
CACCAGAGCGCACAGAGAGG+AGG 0.524479 8_4:+48369991 None:intergenic
CTGCTGAAGCTGCCGAACAA+TGG 0.524989 8_4:-48367490 Msa1329660:CDS
ATATATCAGATTTCCATGCC+TGG 0.525782 8_4:-48369296 Msa1329660:intron
TGTCATTTGGGTAAGGTCGT+TGG 0.526879 8_4:+48364745 None:intergenic
CTCTGTGCGCTCTGGTGCTG+CGG 0.527367 8_4:-48369985 Msa1329660:intron
TGAAATAGCAGCTTGGAAAA+CGG 0.532518 8_4:+48365380 None:intergenic
AATGAAAAGAACCTACCAAA+TGG 0.534270 8_4:-48370095 Msa1329660:CDS
GAAGTGGAGGATCTAACAAC+CGG 0.535317 8_4:+48365927 None:intergenic
AAAGCAGGCACTTTCTCCTC+CGG 0.536936 8_4:-48366501 Msa1329660:CDS
ATCTCGTTGAATGGATCCAC+AGG 0.538595 8_4:-48366539 Msa1329660:CDS
AAACAAGGCCATGAAGTCCT+TGG 0.538622 8_4:-48370369 Msa1329660:intron
AAGGACAAAGTGGTTGCCAC+TGG 0.539776 8_4:-48367557 Msa1329660:CDS
GAGAAAGTGTTCTCTGAGAT+GGG 0.540276 8_4:-48364997 Msa1329660:CDS
GCAGCTCAATTTGCAGCGTA+AGG 0.540463 8_4:-48363869 Msa1329660:exon
CCCAAATCATCGCTTAGAGC+CGG 0.541613 8_4:+48366482 None:intergenic
GCCCAAGGGCTAATAAGTAT+AGG 0.543811 8_4:-48368665 Msa1329660:CDS
AACCAAATGTCATTTGGGTA+AGG 0.544430 8_4:+48364738 None:intergenic
AGCTGTAGATATGGTCAATG+AGG 0.545269 8_4:-48367993 Msa1329660:CDS
ATGGTCGTTTACTTGGATGT+CGG 0.545344 8_4:+48366697 None:intergenic
CGTTTCTTAGACATGTTTGG+AGG 0.547428 8_4:-48369176 Msa1329660:CDS
GAATCATTACAAGGATATGA+TGG 0.551273 8_4:-48368213 Msa1329660:intron
CCTGCCCAACTGCAGCTCCA+GGG 0.551694 8_4:+48367522 None:intergenic
TTCCCCAAAATTGAAATGGC+AGG 0.551749 8_4:+48372509 None:intergenic
TATTCGTTCTGCAATCAAGA+TGG 0.555466 8_4:-48367960 Msa1329660:CDS
GACCATGAAAATTTGCATGC+CGG 0.555878 8_4:-48368276 Msa1329660:CDS
GCAATAGCAGCTAGACAAAA+CGG 0.556137 8_4:-48366291 Msa1329660:CDS
TAATCAGATAACTGGACTAG+TGG 0.556974 8_4:-48368637 Msa1329660:CDS
AGCCAATATCATCATTCTCA+CGG 0.557183 8_4:+48366054 None:intergenic
AGCTGCACTAGTTGCAGATG+AGG 0.560078 8_4:-48364929 Msa1329660:intron
ATGGTCTCCCAGTAACAATC+CGG 0.560105 8_4:-48365946 Msa1329660:CDS
TGTCGAAGTGGAAAACGTAC+TGG 0.564174 8_4:-48368034 Msa1329660:CDS
AAGAAGAAGAAATAGTCTCT+AGG 0.566694 8_4:-48365838 Msa1329660:CDS
GCTGTTGTAGCCCGTGGATG+GGG 0.568721 8_4:-48366743 Msa1329660:CDS
TGCCGTAAACATTCAATCCA+TGG 0.569861 8_4:-48368610 Msa1329660:CDS
GCTGCTGCAAGTCTAGCAAT+CGG 0.570121 8_4:+48363887 None:intergenic
ATTTGTTGAAAATGAAATGG+AGG 0.571551 8_4:-48370042 Msa1329660:CDS
TTTGGCAAAGGTAAAAGTGA+AGG 0.573553 8_4:-48370392 Msa1329660:CDS
TCACTAGAAATCCAAGCACT+GGG 0.573756 8_4:-48368545 Msa1329660:CDS
TCATACTAATCTGACCTGAA+TGG 0.573986 8_4:+48364040 None:intergenic
TGTGTCCATCATTCCAGGCA+TGG 0.575045 8_4:+48369283 None:intergenic
AAGGGAGAAAAGTTTCCCTC+AGG 0.576363 8_4:-48368838 Msa1329660:intron
ATGATAGGTGGTTGTAATTG+GGG 0.576454 8_4:-48366588 Msa1329660:intron
GCTAGACAAAACGGTGCGCA+AGG 0.576960 8_4:-48366282 Msa1329660:CDS
GAGATAATGGTTCCACTCGT+CGG 0.577658 8_4:-48365327 Msa1329660:CDS
TTCTCCTCAAACAATGAATG+TGG 0.578016 8_4:+48368967 None:intergenic
TCAGGAAGAAATTCATGAAG+TGG 0.578057 8_4:+48365911 None:intergenic
GCAGCCACGAAAACCAAGCA+TGG 0.580063 8_4:+48365790 None:intergenic
TCTGTTGATATAGTGAGTCC+AGG 0.580190 8_4:+48370140 None:intergenic
ATCCCTGCGGATAGGTATGT+AGG 0.580219 8_4:+48364686 None:intergenic
GCTGCAAAATCCCTGCGGAT+AGG 0.585813 8_4:+48364678 None:intergenic
TCTTCATTAAGCTATAAGGT+TGG 0.586617 8_4:-48364973 Msa1329660:CDS
AAGTACAAAGGTGCAGTGGA+AGG 0.586751 8_4:-48372358 Msa1329660:CDS
TCCAAGTATCACCTCACCTG+TGG 0.588151 8_4:+48366523 None:intergenic
CTGTTCAGGAAAATAGATTG+TGG 0.588451 8_4:-48368066 Msa1329660:CDS
GCTGTAGATATGGTCAATGA+GGG 0.588831 8_4:-48367992 Msa1329660:CDS
GAGTAAGGATAGTTTGGGCA+CGG 0.590655 8_4:+48372271 None:intergenic
AGGTAAAAGTGAAGGAAACA+AGG 0.590908 8_4:-48370384 Msa1329660:CDS
CATGCTGCTGTTGTAGCCCG+TGG 0.591629 8_4:-48366749 Msa1329660:CDS
GCTATTTCAGTGAGTAGCCA+TGG 0.591843 8_4:-48365366 Msa1329660:CDS
GGTGAACTAACTTCTCAGAC+AGG 0.596053 8_4:-48365866 Msa1329660:CDS
AGTGTCTACCTCGAAGCTAA+GGG 0.598429 8_4:-48368856 Msa1329660:CDS
GAAGAAGTACAAAGGTGCAG+TGG 0.598582 8_4:-48372362 Msa1329660:CDS
GATTCTAGAGAATCATTACA+AGG 0.598884 8_4:-48368222 Msa1329660:CDS
CAATTCTTGGGATAGCCCAA+GGG 0.599592 8_4:-48368679 Msa1329660:CDS
GTTGGAATATGTGGAGAGCA+TGG 0.600312 8_4:-48364124 Msa1329660:CDS
CCTCCCACAAACCATTTGGT+AGG 0.601228 8_4:+48370084 None:intergenic
GGGGATAACGTAATATCAGA+AGG 0.601928 8_4:-48366569 Msa1329660:CDS
TCCCATATTACCAAACACCA+TGG 0.602032 8_4:+48368593 None:intergenic
GAGCGCACAGAGAGGAGGAG+AGG 0.602197 8_4:+48369996 None:intergenic
GCCGAACAATGGCATGCACA+AGG 0.602710 8_4:-48367479 Msa1329660:CDS
AACAAGAATGATGTTAGTGT+TGG 0.604067 8_4:-48372390 Msa1329660:CDS
CTTGATAGAAAATAAAGCAA+AGG 0.605614 8_4:-48363708 Msa1329660:three_prime_UTR
TCTTGGATTGAATGATGAAG+TGG 0.606505 8_4:-48369252 Msa1329660:CDS
ATATAAAGTCTGATAAAGCA+AGG 0.608659 8_4:-48363742 Msa1329660:three_prime_UTR
TCAATTTGCAGCGTAAGGAA+CGG 0.609021 8_4:-48363864 Msa1329660:exon
TGATCAGCTCCTACACCCAC+AGG 0.609765 8_4:-48367921 Msa1329660:intron
TACTCACTGAAATAGCAGCT+TGG 0.609929 8_4:+48365373 None:intergenic
ATCTAAGTACAAGGACAAAG+TGG 0.610286 8_4:-48367567 Msa1329660:CDS
GAGACAAGTCCAGAGGATGT+CGG 0.612900 8_4:-48366824 Msa1329660:CDS
GTGTGTTAATTGTAGTTGGG+AGG 0.613934 8_4:-48370212 Msa1329660:intron
AATCAGATAACTGGACTAGT+GGG 0.613941 8_4:-48368636 Msa1329660:CDS
GGAAGAAATTCATGAAGTGG+AGG 0.614194 8_4:+48365914 None:intergenic
GTGGAACCATTATCTCTGGA+AGG 0.614560 8_4:+48365334 None:intergenic
TGAGGATCCATCTAAGTACA+AGG 0.615147 8_4:-48367576 Msa1329660:CDS
CAGCCACGAAAACCAAGCAT+GGG 0.615672 8_4:+48365791 None:intergenic
ACAACACTTTCCCCATCCAC+GGG 0.616402 8_4:+48366733 None:intergenic
AAGCATATACCTGTGGGTGT+AGG 0.618227 8_4:+48367912 None:intergenic
CTGCAGGTACTTGACCAGAA+AGG 0.619999 8_4:-48364329 Msa1329660:intron
TAGCAGCTTGGAAAACGGCA+CGG 0.620165 8_4:+48365385 None:intergenic
TAATAGAACATAGAACATAG+AGG 0.628070 8_4:-48372554 Msa1329660:five_prime_UTR
AGGAGCTGATCAAGATGTTG+TGG 0.628878 8_4:+48367932 None:intergenic
TTCCTACATACCTATCCGCA+GGG 0.630523 8_4:-48364688 Msa1329660:CDS
GGATGCTTATAAGGAACTTG+AGG 0.631062 8_4:-48368255 Msa1329660:CDS
GTATTTGGTGTATAAGACAC+TGG 0.631881 8_4:-48363536 Msa1329660:three_prime_UTR
GTTGGCATCTTGACAGCTAG+AGG 0.632776 8_4:-48366785 Msa1329660:CDS
GGTACTTGACCAGAAAGGTG+TGG 0.634510 8_4:-48364324 Msa1329660:CDS
GTACTTGACCAGAAAGGTGT+GGG 0.637870 8_4:-48364323 Msa1329660:CDS
AGAATGATGTTAGTGTTGGT+GGG 0.642242 8_4:-48372386 Msa1329660:CDS
AGGGGATGCAGGCAAACCAG+TGG 0.643058 8_4:+48367541 None:intergenic
ACTTTGCAGGACAGAACACA+TGG 0.645120 8_4:-48366253 Msa1329660:intron
TGATGAAATAAGGAATCTGA+AGG 0.648348 8_4:-48366441 Msa1329660:intron
GGAATATGTGGAGAGCATGG+CGG 0.649381 8_4:-48364121 Msa1329660:CDS
CTGGAAGGACTGTAATACCA+TGG 0.650829 8_4:+48365349 None:intergenic
AAATCATCGCTTAGAGCCGG+AGG 0.654508 8_4:+48366485 None:intergenic
CAGCACCAGAGCGCACAGAG+AGG 0.669098 8_4:+48369988 None:intergenic
GGCATCTTGACAGCTAGAGG+TGG 0.670250 8_4:-48366782 Msa1329660:CDS
AAGGACAGAGACAAGTCCAG+AGG 0.685240 8_4:-48366831 Msa1329660:CDS
TGGCTATTACGCAAGAACAG+AGG 0.687603 8_4:-48366036 Msa1329660:CDS
GTTGAATGGATCCACAGGTG+AGG 0.695332 8_4:-48366534 Msa1329660:CDS
TGGATGTTGCAATGTCGAAG+TGG 0.695711 8_4:-48368046 Msa1329660:CDS
CTGTAGATATGGTCAATGAG+GGG 0.699069 8_4:-48367991 Msa1329660:CDS
CCTACCAAATGGTTTGTGGG+AGG 0.699192 8_4:-48370084 Msa1329660:CDS
AATATGTGGAGAGCATGGCG+GGG 0.702583 8_4:-48364119 Msa1329660:CDS
TGGTGGGAGAAGAAGTACAA+AGG 0.710183 8_4:-48372370 Msa1329660:CDS
ACAAGTCCAGAGGATGTCGG+GGG 0.714831 8_4:-48366821 Msa1329660:CDS
CACTAGAAATCCAAGCACTG+GGG 0.715102 8_4:-48368544 Msa1329660:CDS
TGGGGAAAAGAAACTTTATG+GGG 0.717321 8_4:-48368526 Msa1329660:CDS
ACACCAAATACACCAAGACA+CGG 0.726623 8_4:+48363548 None:intergenic
GTTGATATAGTGAGTCCAGG+AGG 0.729602 8_4:+48370143 None:intergenic
AGTTACGGCTTACATCAACA+TGG 0.736612 8_4:-48372329 Msa1329660:CDS
TGGTGTATAAGACACTGGTG+TGG 0.743788 8_4:-48363531 Msa1329660:three_prime_UTR
ATCATGCTGCAAAATCCCTG+CGG 0.765148 8_4:+48364673 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAACAAAATATAAGATAA+AGG + chr8_4:48363861-48363880 None:intergenic 10.0%
!!! TAAAAAAAAAACTTTTTATG+AGG + chr8_4:48363947-48363966 None:intergenic 10.0%
!! GAAAATAAAATAAAAAACAA+AGG - chr8_4:48364659-48364678 Msa1329660:intron 10.0%
!! AAATAAAATAAAAAACAAAG+GGG - chr8_4:48364661-48364680 Msa1329660:intron 10.0%
!!! ATTAAATTTGATTCTTTTTT+TGG - chr8_4:48366666-48366685 Msa1329660:intron 10.0%
!! TCTATAAAATTGTTTATAAT+AGG - chr8_4:48367725-48367744 Msa1329660:intron 10.0%
!! CTATAAAATTGTTTATAATA+GGG - chr8_4:48367726-48367745 Msa1329660:intron 10.0%
!!! CATTTTTTTTATTAATGATA+TGG + chr8_4:48372298-48372317 None:intergenic 10.0%
!! ATCATTAATAAAAAAAATGA+AGG - chr8_4:48372299-48372318 Msa1329660:CDS 10.0%
!! ATTACAAACACTAAAAATTA+AGG + chr8_4:48363922-48363941 None:intergenic 15.0%
!! AATAATCATTCTTAATTAGA+CGG + chr8_4:48364195-48364214 None:intergenic 15.0%
!!! AAAAGTTCCATTTTATTTAT+AGG - chr8_4:48366629-48366648 Msa1329660:intron 15.0%
!! AATTACACCTATAAATAAAA+TGG + chr8_4:48366639-48366658 None:intergenic 15.0%
!! TATATATAAGAAAAGTTTCA+TGG + chr8_4:48367054-48367073 None:intergenic 15.0%
!! TATATGTTAAATTTAGGTAT+TGG - chr8_4:48367072-48367091 Msa1329660:intron 15.0%
!! TATTTGCAAAAGAAATTTAA+AGG + chr8_4:48368213-48368232 None:intergenic 15.0%
!! TCTGAAAAGTTAATTATAAA+AGG - chr8_4:48368280-48368299 Msa1329660:CDS 15.0%
!!! AATGATGTTATTTGATTATA+CGG + chr8_4:48368319-48368338 None:intergenic 15.0%
!! AAAATTATGAATGCATTAAA+AGG - chr8_4:48369871-48369890 Msa1329660:intron 15.0%
!!! ATTTTTTAATTGAAAATCGT+TGG + chr8_4:48370564-48370583 None:intergenic 15.0%
!! TAAAATAATGTTGAAAGTAA+TGG + chr8_4:48371634-48371653 None:intergenic 15.0%
!! AAATTAAGGAAGTTAAAGAA+AGG + chr8_4:48363908-48363927 None:intergenic 20.0%
!! TATTTCATTACTCATTTCTA+GGG + chr8_4:48364595-48364614 None:intergenic 20.0%
!! TTATTTCATTACTCATTTCT+AGG + chr8_4:48364596-48364615 None:intergenic 20.0%
!!! AGAAAAATCAAACATTGATT+AGG - chr8_4:48364633-48364652 Msa1329660:intron 20.0%
!! CTTAGCTTACAATAAATAAA+TGG + chr8_4:48364687-48364706 None:intergenic 20.0%
!! TTTATTTATTGTAAGCTAAG+TGG - chr8_4:48364687-48364706 Msa1329660:CDS 20.0%
!! AACATGTTATGTTAAATGAA+AGG + chr8_4:48364713-48364732 None:intergenic 20.0%
!!! AATAGGGTATTTATTTAACA+TGG + chr8_4:48364786-48364805 None:intergenic 20.0%
!! GAAAACTTCAAATGAAAAAT+AGG - chr8_4:48365005-48365024 Msa1329660:CDS 20.0%
!!! TCTATCATCATGAATTTTAT+TGG - chr8_4:48365070-48365089 Msa1329660:intron 20.0%
!! GTTAATTCAGAACTAATATA+AGG + chr8_4:48365342-48365361 None:intergenic 20.0%
!!! TTTTGAAAAGTATCAACTAA+GGG + chr8_4:48365397-48365416 None:intergenic 20.0%
!!! TTTTTGAAAAGTATCAACTA+AGG + chr8_4:48365398-48365417 None:intergenic 20.0%
!!! ATTAAAAGTGACAATACTTT+TGG + chr8_4:48365595-48365614 None:intergenic 20.0%
!!! TTTCATTTTCAACAAATCTA+AGG + chr8_4:48366022-48366041 None:intergenic 20.0%
!!! TAGATTTGTTGAAAATGAAA+TGG - chr8_4:48366022-48366041 Msa1329660:CDS 20.0%
!! TATCTAAATTCATAACCATT+TGG - chr8_4:48366179-48366198 Msa1329660:intron 20.0%
!!! TAATTCAACATTCTTTTTTG+AGG - chr8_4:48366691-48366710 Msa1329660:CDS 20.0%
!!! AATTCAACATTCTTTTTTGA+GGG - chr8_4:48366692-48366711 Msa1329660:CDS 20.0%
!! AAAACTAATAGATATGACAA+TGG + chr8_4:48367636-48367655 None:intergenic 20.0%
!!! AATAGATTACTATTTCCTTT+TGG - chr8_4:48367692-48367711 Msa1329660:intron 20.0%
!! TATATTATATACGATGTTGT+AGG - chr8_4:48367966-48367985 Msa1329660:CDS 20.0%
!! AATAACATCATTTAGCTAAA+TGG - chr8_4:48368327-48368346 Msa1329660:intron 20.0%
!!! AAGTTTATTTGTTTAGTTTG+AGG - chr8_4:48368473-48368492 Msa1329660:intron 20.0%
!! TAACGATATAATGAAATGAA+GGG + chr8_4:48368677-48368696 None:intergenic 20.0%
!!! ACTTGTATTGGATATTTTAT+TGG + chr8_4:48369041-48369060 None:intergenic 20.0%
!! TAGTCATGAAATTAAATCTA+GGG + chr8_4:48369150-48369169 None:intergenic 20.0%
!! TAGAATTTAATGATTCCTTA+TGG + chr8_4:48369188-48369207 None:intergenic 20.0%
!! TAATATCCATTTATGATGAT+AGG - chr8_4:48369464-48369483 Msa1329660:intron 20.0%
!! ATTGCTATAAATTATGAACT+TGG + chr8_4:48370382-48370401 None:intergenic 20.0%
!! ATAATTTATAGCAATTCAGT+AGG - chr8_4:48370387-48370406 Msa1329660:CDS 20.0%
!! TAATTTATAGCAATTCAGTA+GGG - chr8_4:48370388-48370407 Msa1329660:CDS 20.0%
!! TCAAGTATAATTCTAAATTG+TGG - chr8_4:48370457-48370476 Msa1329660:intron 20.0%
!!! TATATCATGAAGCAATTTTT+TGG - chr8_4:48370931-48370950 Msa1329660:intron 20.0%
!!! TTTTTATTATTATGTGTCCT+GGG + chr8_4:48371487-48371506 None:intergenic 20.0%
!!! ATTTTTATTATTATGTGTCC+TGG + chr8_4:48371488-48371507 None:intergenic 20.0%
!!! CTAAAGTCATTTTATAAAGT+CGG + chr8_4:48371568-48371587 None:intergenic 20.0%
!! ACTTTATAAAATGACTTTAG+AGG - chr8_4:48371568-48371587 Msa1329660:intron 20.0%
!!! ATTTTACCTATTTGCTAAAT+CGG - chr8_4:48371648-48371667 Msa1329660:intron 20.0%
!!! TTTGTTGTTTAAATTTGCAT+TGG + chr8_4:48371833-48371852 None:intergenic 20.0%
!! AATCAATGAATTTGATTATC+AGG - chr8_4:48371921-48371940 Msa1329660:intron 20.0%
!!! ACTTTGAATTTTATATGCAA+AGG + chr8_4:48372405-48372424 None:intergenic 20.0%
! TAATAGAACATAGAACATAG+AGG - chr8_4:48363513-48363532 Msa1329660:three_prime_UTR 25.0%
!! TCAGATAATAGGATTTTCAA+AGG - chr8_4:48363653-48363672 Msa1329660:three_prime_UTR 25.0%
!! CAGATAATAGGATTTTCAAA+GGG - chr8_4:48363654-48363673 Msa1329660:three_prime_UTR 25.0%
! GTTAAATAAATACCCTATTG+TGG - chr8_4:48364787-48364806 Msa1329660:intron 25.0%
! GTGGATCATATTTAATAAAC+TGG - chr8_4:48364873-48364892 Msa1329660:intron 25.0%
! TGTAACTATGTAATGAAACA+AGG + chr8_4:48365370-48365389 None:intergenic 25.0%
! AGAGTTATAAAAGAGTTGTA+AGG - chr8_4:48365545-48365564 Msa1329660:intron 25.0%
! GAGTTATAAAAGAGTTGTAA+GGG - chr8_4:48365546-48365565 Msa1329660:intron 25.0%
!! ATTTGTTGAAAATGAAATGG+AGG - chr8_4:48366025-48366044 Msa1329660:CDS 25.0%
! TTACTTTCTCATTATGTTCT+AGG - chr8_4:48366129-48366148 Msa1329660:intron 25.0%
!!! ATTATGTTCTAGGACTTTTT+TGG - chr8_4:48366139-48366158 Msa1329660:intron 25.0%
! TATGTTACATTCTTGATGTT+TGG + chr8_4:48366425-48366444 None:intergenic 25.0%
! AACATCAAGAATGTAACATA+CGG - chr8_4:48366425-48366444 Msa1329660:intron 25.0%
!! ATGTGTTTCTATTATAGCAT+TGG - chr8_4:48366453-48366472 Msa1329660:CDS 25.0%
! AAGTTCTTGATGTAAATAGT+TGG - chr8_4:48366517-48366536 Msa1329660:CDS 25.0%
! TTACAGCTTAAACTATCTAA+TGG + chr8_4:48366559-48366578 None:intergenic 25.0%
! TAACAAATGACGTTCATTAA+CGG + chr8_4:48367015-48367034 None:intergenic 25.0%
!! GAAAAGCTAAAGTATTCAAA+AGG - chr8_4:48367127-48367146 Msa1329660:intron 25.0%
! AAAACATGAAGAAGTTAATG+GGG + chr8_4:48367267-48367286 None:intergenic 25.0%
! CAAAACATGAAGAAGTTAAT+GGG + chr8_4:48367268-48367287 None:intergenic 25.0%
! ACAAAACATGAAGAAGTTAA+TGG + chr8_4:48367269-48367288 None:intergenic 25.0%
!!! TTAAAGCTGTTTTCAATTCT+TGG - chr8_4:48367375-48367394 Msa1329660:intron 25.0%
!!! TAAAGCTGTTTTCAATTCTT+GGG - chr8_4:48367376-48367395 Msa1329660:intron 25.0%
! AAATTGTTTATAATAGGGAG+AGG - chr8_4:48367731-48367750 Msa1329660:intron 25.0%
! AACAGTAAGACAAATCTAAA+GGG + chr8_4:48367893-48367912 None:intergenic 25.0%
! AAACAGTAAGACAAATCTAA+AGG + chr8_4:48367894-48367913 None:intergenic 25.0%
! AATCAAAATAGCTGTAGATA+TGG - chr8_4:48368065-48368084 Msa1329660:CDS 25.0%
! CTTAAAGCAATCAATAAAAC+TGG + chr8_4:48368456-48368475 None:intergenic 25.0%
! AACGATATAATGAAATGAAG+GGG + chr8_4:48368676-48368695 None:intergenic 25.0%
! CTAACGATATAATGAAATGA+AGG + chr8_4:48368678-48368697 None:intergenic 25.0%
! TGTTCACATAAAACTTGTAT+TGG + chr8_4:48369053-48369072 None:intergenic 25.0%
! CTAGTCATGAAATTAAATCT+AGG + chr8_4:48369151-48369170 None:intergenic 25.0%
!! CTAGATTTAATTTCATGACT+AGG - chr8_4:48369149-48369168 Msa1329660:intron 25.0%
! TCAAAATCTGATCTTTGATA+AGG + chr8_4:48370081-48370100 None:intergenic 25.0%
!! TTATCAAAGATCAGATTTTG+AGG - chr8_4:48370080-48370099 Msa1329660:CDS 25.0%
!! TATCAAAGATCAGATTTTGA+GGG - chr8_4:48370081-48370100 Msa1329660:CDS 25.0%
! ATTTCATTTAAATCACCTTC+AGG + chr8_4:48370177-48370196 None:intergenic 25.0%
! GGTGATTTAAATGAAATTGT+TGG - chr8_4:48370180-48370199 Msa1329660:CDS 25.0%
!!! ATGGTAATTTGTTATGAACA+AGG + chr8_4:48370325-48370344 None:intergenic 25.0%
! ATTTCAAATTGTCAAACATG+AGG + chr8_4:48370612-48370631 None:intergenic 25.0%
!!! AAGTTTTATGCATAGATGAT+AGG + chr8_4:48370834-48370853 None:intergenic 25.0%
! ATCTATGCATAAAACTTATG+AGG - chr8_4:48370837-48370856 Msa1329660:intron 25.0%
! TCAAGCTGATAAATTGTTAA+GGG + chr8_4:48370909-48370928 None:intergenic 25.0%
! TTCAAGCTGATAAATTGTTA+AGG + chr8_4:48370910-48370929 None:intergenic 25.0%
!! TAAAATTAGAAAGTGCAAAG+AGG + chr8_4:48371252-48371271 None:intergenic 25.0%
!! TGCGTTAGCTTAATATATAA+AGG - chr8_4:48371684-48371703 Msa1329660:intron 25.0%
! ATCAAAATTTGCACAGAAAA+GGG - chr8_4:48371774-48371793 Msa1329660:intron 25.0%
! ATTATGGTGATAAAACACTT+CGG - chr8_4:48371889-48371908 Msa1329660:intron 25.0%
! AATGAATTTGATTATCAGGT+TGG - chr8_4:48371925-48371944 Msa1329660:intron 25.0%
! TTAGTCAAACTGAAAATTTG+AGG - chr8_4:48372141-48372160 Msa1329660:intron 25.0%
!!! TTATTATACTGTTTCTGTCA+AGG - chr8_4:48372226-48372245 Msa1329660:intron 25.0%
!!! TATTATACTGTTTCTGTCAA+GGG - chr8_4:48372227-48372246 Msa1329660:intron 25.0%
! ATATAAAGTCTGATAAAGCA+AGG - chr8_4:48372325-48372344 Msa1329660:CDS 25.0%
! CTTGATAGAAAATAAAGCAA+AGG - chr8_4:48372359-48372378 Msa1329660:CDS 25.0%
ACACATCAACATCAGATAAT+AGG - chr8_4:48363642-48363661 Msa1329660:three_prime_UTR 30.0%
AACAAGAATGATGTTAGTGT+TGG - chr8_4:48363677-48363696 Msa1329660:three_prime_UTR 30.0%
TATTGGAGTAAGGATAGTTT+GGG + chr8_4:48363804-48363823 None:intergenic 30.0%
TTATTGGAGTAAGGATAGTT+TGG + chr8_4:48363805-48363824 None:intergenic 30.0%
ACGTAAAAAAAACATGCAGT+TGG + chr8_4:48364122-48364141 None:intergenic 30.0%
AATCATTCTTAATTAGACGG+AGG + chr8_4:48364192-48364211 None:intergenic 30.0%
CTTAATGATTCGTGTTTCTT+TGG - chr8_4:48364297-48364316 Msa1329660:CDS 30.0%
TCTTTGGACATCTCAAAATA+TGG - chr8_4:48364313-48364332 Msa1329660:CDS 30.0%
! CCTTATTTAGTTTCGTATTG+AGG + chr8_4:48364397-48364416 None:intergenic 30.0%
CCTCAATACGAAACTAAATA+AGG - chr8_4:48364394-48364413 Msa1329660:intron 30.0%
ACTAAATAAGGCTAGACTTA+AGG - chr8_4:48364406-48364425 Msa1329660:intron 30.0%
CTAAATAAGGCTAGACTTAA+GGG - chr8_4:48364407-48364426 Msa1329660:intron 30.0%
! TTTCTAGGGATGATAAAACA+GGG + chr8_4:48364581-48364600 None:intergenic 30.0%
! ATTTCTAGGGATGATAAAAC+AGG + chr8_4:48364582-48364601 None:intergenic 30.0%
CAAAGTGCATCAAAATGAAA+TGG - chr8_4:48364739-48364758 Msa1329660:CDS 30.0%
AAATAAATACCCTATTGTGG+AGG - chr8_4:48364790-48364809 Msa1329660:intron 30.0%
AATAAATACCCTATTGTGGA+GGG - chr8_4:48364791-48364810 Msa1329660:intron 30.0%
! AAAATTTTCCCTCCACAATA+GGG + chr8_4:48364802-48364821 None:intergenic 30.0%
TACTTTCTCTTCACTTTATG+TGG - chr8_4:48364854-48364873 Msa1329660:intron 30.0%
TCCACTTAAACATCCAAAAT+AGG - chr8_4:48365291-48365310 Msa1329660:intron 30.0%
CCACTTAAACATCCAAAATA+GGG - chr8_4:48365292-48365311 Msa1329660:intron 30.0%
AGCATAAAGAATACTTACCA+AGG + chr8_4:48365718-48365737 None:intergenic 30.0%
CTTGTGTGTTAATTGTAGTT+GGG - chr8_4:48365852-48365871 Msa1329660:CDS 30.0%
AATGAAAAGAACCTACCAAA+TGG - chr8_4:48365972-48365991 Msa1329660:CDS 30.0%
AGTAAAACCAAACAGGAAAA+AGG + chr8_4:48366114-48366133 None:intergenic 30.0%
ATGAGAAAGTAAAACCAAAC+AGG + chr8_4:48366121-48366140 None:intergenic 30.0%
ATAGCTTATGACATGTCTAT+AGG - chr8_4:48366216-48366235 Msa1329660:intron 30.0%
ACATCAAGAATGTAACATAC+GGG - chr8_4:48366426-48366445 Msa1329660:intron 30.0%
CAACTTAGGATTTATATCCA+AGG - chr8_4:48366483-48366502 Msa1329660:CDS 30.0%
GAACTTGAAGTTAAAAACCT+TGG + chr8_4:48366503-48366522 None:intergenic 30.0%
!! TTTTTGAGGGAATCCTTTTA+TGG - chr8_4:48366705-48366724 Msa1329660:CDS 30.0%
!! TACATACAAGTTGATGCAAT+AGG + chr8_4:48366743-48366762 None:intergenic 30.0%
ATAGAAACATCAACACCAAA+AGG + chr8_4:48367710-48367729 None:intergenic 30.0%
! GATTCTAGAGAATCATTACA+AGG - chr8_4:48367845-48367864 Msa1329660:intron 30.0%
GAATCATTACAAGGATATGA+TGG - chr8_4:48367854-48367873 Msa1329660:intron 30.0%
ATTTCAGAAGAATTACTTGC+CGG + chr8_4:48367943-48367962 None:intergenic 30.0%
!! ACAAGGAAAAAGTGCAATTT+TGG - chr8_4:48368605-48368624 Msa1329660:CDS 30.0%
TCTGATTAAAAAGTCCAGAT+TGG - chr8_4:48368705-48368724 Msa1329660:CDS 30.0%
! ATTCACATTTTCATCCAATC+TGG + chr8_4:48368722-48368741 None:intergenic 30.0%
! TACCTAATGGCTTAAGATTT+TGG - chr8_4:48368773-48368792 Msa1329660:intron 30.0%
TTCCAAAATCTTAAGCCATT+AGG + chr8_4:48368778-48368797 None:intergenic 30.0%
!!! GGAATTGTTTTAATCCACAT+AGG + chr8_4:48368879-48368898 None:intergenic 30.0%
ATTAAAACAATTCCCGCTTT+AGG - chr8_4:48368885-48368904 Msa1329660:CDS 30.0%
TTAAAACAATTCCCGCTTTA+GGG - chr8_4:48368886-48368905 Msa1329660:CDS 30.0%
! TTAAAGTATCACGTGTAAGT+AGG - chr8_4:48368961-48368980 Msa1329660:CDS 30.0%
GTTTGAGCAACATTTAAATG+AGG - chr8_4:48369012-48369031 Msa1329660:intron 30.0%
!! ACAAGTTTTATGTGAACATG+TGG - chr8_4:48369055-48369074 Msa1329660:intron 30.0%
GGTTAAACAAATCATCCATA+AGG - chr8_4:48369170-48369189 Msa1329660:intron 30.0%
ATACACACTTGCATTATTGA+AGG - chr8_4:48369212-48369231 Msa1329660:CDS 30.0%
TGTCAACAATATAGAATCCA+AGG + chr8_4:48369406-48369425 None:intergenic 30.0%
TATCCATTTATGATGATAGG+TGG - chr8_4:48369467-48369486 Msa1329660:intron 30.0%
TGATGAAATAAGGAATCTGA+AGG - chr8_4:48369626-48369645 Msa1329660:intron 30.0%
CAAAACATCTAATTCTTGCT+AGG - chr8_4:48369692-48369711 Msa1329660:intron 30.0%
TCATATCATTGTTGTGTATC+AGG - chr8_4:48369724-48369743 Msa1329660:intron 30.0%
!!! AGTTTTTTGCTTCAGATGAA+AGG - chr8_4:48369983-48370002 Msa1329660:intron 30.0%
AAGAAGAAGAAATAGTCTCT+AGG - chr8_4:48370229-48370248 Msa1329660:intron 30.0%
TGAACAAGGATCATAAAAAG+AGG + chr8_4:48370311-48370330 None:intergenic 30.0%
!!! TGTTATTTTGTCCTAAATCG+TGG + chr8_4:48370533-48370552 None:intergenic 30.0%
! CAATTTGAAATTACGTGAAC+AGG - chr8_4:48370621-48370640 Msa1329660:intron 30.0%
! TTAATTCCTGTCGGTTAAAA+AGG + chr8_4:48371018-48371037 None:intergenic 30.0%
GACATCAAGTGAGTTTAATA+AGG - chr8_4:48371038-48371057 Msa1329660:intron 30.0%
TCTTCATTAAGCTATAAGGT+TGG - chr8_4:48371094-48371113 Msa1329660:intron 30.0%
TCATTTGCAATCTACACAAA+TGG + chr8_4:48371279-48371298 None:intergenic 30.0%
GGTTCCAAATGAAAAGAAAT+CGG + chr8_4:48371304-48371323 None:intergenic 30.0%
! ACTGTAACCAAATGTCATTT+GGG + chr8_4:48371337-48371356 None:intergenic 30.0%
TACTGTAACCAAATGTCATT+TGG + chr8_4:48371338-48371357 None:intergenic 30.0%
! TAAAATGACTTTAGAGGTGT+AGG - chr8_4:48371574-48371593 Msa1329660:intron 30.0%
AAATTATTGACAACAACTGC+AGG - chr8_4:48371722-48371741 Msa1329660:intron 30.0%
CATCAAAATTTGCACAGAAA+AGG - chr8_4:48371773-48371792 Msa1329660:intron 30.0%
TGGTAAGTTACCTTCAAATT+TGG + chr8_4:48371813-48371832 None:intergenic 30.0%
!! GTATAAAAAATAAAGTGCCG+TGG + chr8_4:48372067-48372086 None:intergenic 30.0%
ACTGGTGTGGAATTATATAT+AGG - chr8_4:48372549-48372568 Msa1329660:five_prime_UTR 30.0%
!! TACACCTGCCATTTCAATTT+TGG - chr8_4:48363554-48363573 Msa1329660:three_prime_UTR 35.0%
!! ACACCTGCCATTTCAATTTT+GGG - chr8_4:48363555-48363574 Msa1329660:three_prime_UTR 35.0%
TATGACTATGCCTCTTACTA+TGG + chr8_4:48363618-48363637 None:intergenic 35.0%
! TAGTAAGAGGCATAGTCATA+AGG - chr8_4:48363618-48363637 Msa1329660:three_prime_UTR 35.0%
! AAGAATGATGTTAGTGTTGG+TGG - chr8_4:48363680-48363699 Msa1329660:three_prime_UTR 35.0%
!! AGAATGATGTTAGTGTTGGT+GGG - chr8_4:48363681-48363700 Msa1329660:three_prime_UTR 35.0%
!!! AAGTGTACCTTTTTTGTGGT+GGG + chr8_4:48363833-48363852 None:intergenic 35.0%
!!! CTAGAAGTGTACCTTTTTTG+TGG + chr8_4:48363837-48363856 None:intergenic 35.0%
ATTCTTAATTAGACGGAGGA+TGG + chr8_4:48364188-48364207 None:intergenic 35.0%
TGGACCACAAATTGTAAAAG+CGG - chr8_4:48364370-48364389 Msa1329660:intron 35.0%
!!! TCCATTACACCTGCTATTTT+GGG + chr8_4:48364542-48364561 None:intergenic 35.0%
!! ATCCATTACACCTGCTATTT+TGG + chr8_4:48364543-48364562 None:intergenic 35.0%
!! AAATAGCAGGTGTAATGGAT+CGG - chr8_4:48364543-48364562 Msa1329660:intron 35.0%
! CAAAATTTTCCCTCCACAAT+AGG + chr8_4:48364803-48364822 None:intergenic 35.0%
! CTATTGTGGAGGGAAAATTT+TGG - chr8_4:48364801-48364820 Msa1329660:intron 35.0%
TTTGGATGTTTAAGTGGATC+CGG + chr8_4:48365289-48365308 None:intergenic 35.0%
!! CCCTATTTTGGATGTTTAAG+TGG + chr8_4:48365295-48365314 None:intergenic 35.0%
TTTGGAAATCATAGCTGCAT+TGG + chr8_4:48365577-48365596 None:intergenic 35.0%
!!! ATACAGAGAGTGTTCACTTT+TGG - chr8_4:48365657-48365676 Msa1329660:intron 35.0%
TTTGGCAAAGGTAAAAGTGA+AGG - chr8_4:48365675-48365694 Msa1329660:intron 35.0%
AGGTAAAAGTGAAGGAAACA+AGG - chr8_4:48365683-48365702 Msa1329660:intron 35.0%
AATACTTACCAAGGACTTCA+TGG + chr8_4:48365709-48365728 None:intergenic 35.0%
GCTTGTGTGTTAATTGTAGT+TGG - chr8_4:48365851-48365870 Msa1329660:CDS 35.0%
TTAATTGTAGTTGGGAGGAA+AGG - chr8_4:48365860-48365879 Msa1329660:CDS 35.0%
TAATTGTAGTTGGGAGGAAA+GGG - chr8_4:48365861-48365880 Msa1329660:CDS 35.0%
TTAGCAGAAATGGCAACAAT+TGG - chr8_4:48365891-48365910 Msa1329660:CDS 35.0%
!! TTTTGAAGGATTCCCAAGAA+AGG + chr8_4:48366051-48366070 None:intergenic 35.0%
! GTAAAAGCCTTTTTCCTGTT+TGG - chr8_4:48366104-48366123 Msa1329660:intron 35.0%
TAACCATTTGGTAGAGCTTA+TGG - chr8_4:48366191-48366210 Msa1329660:intron 35.0%
TTTCCATAAGCTCTACCAAA+TGG + chr8_4:48366197-48366216 None:intergenic 35.0%
TTTCCAATCATAGAGAATCC+AGG - chr8_4:48366378-48366397 Msa1329660:intron 35.0%
GCATGTAAGTACACCATAAA+AGG + chr8_4:48366721-48366740 None:intergenic 35.0%
ATATATCAGATTTCCATGCC+TGG - chr8_4:48366771-48366790 Msa1329660:CDS 35.0%
ATGGACACAGTTCTTAATCT+TGG - chr8_4:48366798-48366817 Msa1329660:CDS 35.0%
TCTTGGATTGAATGATGAAG+TGG - chr8_4:48366815-48366834 Msa1329660:CDS 35.0%
AGACGTTTCTTAGACATGTT+TGG - chr8_4:48366888-48366907 Msa1329660:intron 35.0%
GAAAAGTTTCATGGAAGCAA+TGG + chr8_4:48367045-48367064 None:intergenic 35.0%
CATTCCACATTCATTGTTTG+AGG - chr8_4:48367096-48367115 Msa1329660:intron 35.0%
TTCTCCTCAAACAATGAATG+TGG + chr8_4:48367103-48367122 None:intergenic 35.0%
GATCTGCAATTGGTAAATCA+AGG + chr8_4:48367331-48367350 None:intergenic 35.0%
! GCTAATTCTAGTTGCTTCTT+TGG + chr8_4:48367353-48367372 None:intergenic 35.0%
TCCTATACTTATTAGCCCTT+GGG + chr8_4:48367406-48367425 None:intergenic 35.0%
!! AGGAGCATTAATCAGATAAC+TGG - chr8_4:48367422-48367441 Msa1329660:intron 35.0%
! TAATCAGATAACTGGACTAG+TGG - chr8_4:48367430-48367449 Msa1329660:intron 35.0%
!! AATCAGATAACTGGACTAGT+GGG - chr8_4:48367431-48367450 Msa1329660:intron 35.0%
! CACCATGGATTGAATGTTTA+CGG + chr8_4:48367462-48367481 None:intergenic 35.0%
AACATTCAATCCATGGTGTT+TGG - chr8_4:48367464-48367483 Msa1329660:CDS 35.0%
! ATCCATGGTGTTTGGTAATA+TGG - chr8_4:48367472-48367491 Msa1329660:CDS 35.0%
! TCCATGGTGTTTGGTAATAT+GGG - chr8_4:48367473-48367492 Msa1329660:CDS 35.0%
GGTAATATGGGAAATACTTC+AGG - chr8_4:48367485-48367504 Msa1329660:CDS 35.0%
ACTGGGGAAAAGAAACTTTA+TGG - chr8_4:48367539-48367558 Msa1329660:CDS 35.0%
CTGGGGAAAAGAAACTTTAT+GGG - chr8_4:48367540-48367559 Msa1329660:CDS 35.0%
TGGGGAAAAGAAACTTTATG+GGG - chr8_4:48367541-48367560 Msa1329660:CDS 35.0%
TTCATGGTCTCTAAATCTTC+AGG + chr8_4:48367780-48367799 None:intergenic 35.0%
TCAAGTTCCTTATAAGCATC+CGG + chr8_4:48367813-48367832 None:intergenic 35.0%
! GTTTGTTTGTATCGATAGAC+CGG - chr8_4:48367921-48367940 Msa1329660:intron 35.0%
CTGTTCAGGAAAATAGATTG+TGG - chr8_4:48368001-48368020 Msa1329660:CDS 35.0%
TATTCGTTCTGCAATCAAGA+TGG - chr8_4:48368107-48368126 Msa1329660:intron 35.0%
ACTTTGTCCTTGTACTTAGA+TGG + chr8_4:48368501-48368520 None:intergenic 35.0%
ATCTAAGTACAAGGACAAAG+TGG - chr8_4:48368500-48368519 Msa1329660:intron 35.0%
TGGTTTCTCTAAGCATAGTA+TGG - chr8_4:48368831-48368850 Msa1329660:intron 35.0%
TAAAACAATTCCCGCTTTAG+GGG - chr8_4:48368887-48368906 Msa1329660:CDS 35.0%
CATAATGTTTCTCTCCATGT+TGG + chr8_4:48369109-48369128 None:intergenic 35.0%
CAACATGGAGAGAAACATTA+TGG - chr8_4:48369107-48369126 Msa1329660:intron 35.0%
TGGAGAGAAACATTATGGTT+AGG - chr8_4:48369112-48369131 Msa1329660:intron 35.0%
CACTTGCATTATTGAAGGTA+AGG - chr8_4:48369217-48369236 Msa1329660:CDS 35.0%
! AATCCAAGGTTACCTTTTCA+TGG + chr8_4:48369392-48369411 None:intergenic 35.0%
CAACCACCTATCATCATAAA+TGG + chr8_4:48369473-48369492 None:intergenic 35.0%
TGATGATAGGTGGTTGTAAT+TGG - chr8_4:48369477-48369496 Msa1329660:intron 35.0%
GATGATAGGTGGTTGTAATT+GGG - chr8_4:48369478-48369497 Msa1329660:intron 35.0%
ATGATAGGTGGTTGTAATTG+GGG - chr8_4:48369479-48369498 Msa1329660:intron 35.0%
ACGTAATATCAGAAGGAGAA+TGG - chr8_4:48369505-48369524 Msa1329660:intron 35.0%
ATTTGGGAACTTTCATGTCT+TGG - chr8_4:48369601-48369620 Msa1329660:intron 35.0%
TTTGGGAACTTTCATGTCTT+GGG - chr8_4:48369602-48369621 Msa1329660:intron 35.0%
! CATTGTTGTGTATCAGGTTT+TGG - chr8_4:48369730-48369749 Msa1329660:intron 35.0%
!!! ACTTTTTAGAGCATGACACA+CGG - chr8_4:48369913-48369932 Msa1329660:intron 35.0%
TGCTTCAGATGAAAGGATAA+AGG - chr8_4:48369990-48370009 Msa1329660:CDS 35.0%
AGCCAATATCATCATTCTCA+CGG + chr8_4:48370016-48370035 None:intergenic 35.0%
TCAGGAAGAAATTCATGAAG+TGG + chr8_4:48370159-48370178 None:intergenic 35.0%
CTTCATGAATTTCTTCCTGA+AGG - chr8_4:48370159-48370178 Msa1329660:CDS 35.0%
! TTTGAAGTTAATCCCATGCT+TGG - chr8_4:48370264-48370283 Msa1329660:intron 35.0%
CACAAGTCATAGGATATTGA+TGG + chr8_4:48370344-48370363 None:intergenic 35.0%
CAACACTAAACACAAGTCAT+AGG + chr8_4:48370354-48370373 None:intergenic 35.0%
TTATATTGCGGCCATAATTG+TGG + chr8_4:48370490-48370509 None:intergenic 35.0%
ACAATTATGGCCGCAATATA+AGG - chr8_4:48370489-48370508 Msa1329660:intron 35.0%
ACACTGTGAACCTTATATTG+CGG + chr8_4:48370502-48370521 None:intergenic 35.0%
TTGAAATTACGTGAACAGGT+TGG - chr8_4:48370625-48370644 Msa1329660:intron 35.0%
TGAAATTACGTGAACAGGTT+GGG - chr8_4:48370626-48370645 Msa1329660:intron 35.0%
TGAAATAGCAGCTTGGAAAA+CGG + chr8_4:48370690-48370709 None:intergenic 35.0%
TAGAAAAAAGATCATGCCTG+AGG + chr8_4:48370770-48370789 None:intergenic 35.0%
CTTGATGTCTTAATTCCTGT+CGG + chr8_4:48371027-48371046 None:intergenic 35.0%
!! GAAGCCGATTTCTTTTCATT+TGG - chr8_4:48371297-48371316 Msa1329660:intron 35.0%
! AACCAAATGTCATTTGGGTA+AGG + chr8_4:48371332-48371351 None:intergenic 35.0%
ACTATGGAACTAACCTCAAA+TGG + chr8_4:48371420-48371439 None:intergenic 35.0%
ACAACAGTATGAGAAATCAC+CGG + chr8_4:48371450-48371469 None:intergenic 35.0%
! TTTAGAGGTGTAGGATAAGT+GGG - chr8_4:48371583-48371602 Msa1329660:intron 35.0%
! TTACCTATTTGCTAAATCGG+AGG - chr8_4:48371651-48371670 Msa1329660:intron 35.0%
TGCTGCTAAACCAAATTTGA+AGG - chr8_4:48371800-48371819 Msa1329660:intron 35.0%
! CAAAATTTTGTCACGCATCT+TGG - chr8_4:48371849-48371868 Msa1329660:intron 35.0%
!! GATTATCAGGTTGGAATATG+TGG - chr8_4:48371934-48371953 Msa1329660:intron 35.0%
TCATACTAATCTGACCTGAA+TGG + chr8_4:48372030-48372049 None:intergenic 35.0%
! AAATTTGAGGACTCTTTTGC+AGG - chr8_4:48372154-48372173 Msa1329660:intron 35.0%
! AATTTGAGGACTCTTTTGCA+GGG - chr8_4:48372155-48372174 Msa1329660:intron 35.0%
!! GTATTTGGTGTATAAGACAC+TGG - chr8_4:48372531-48372550 Msa1329660:five_prime_UTR 35.0%
!! CACCTGCCATTTCAATTTTG+GGG - chr8_4:48363556-48363575 Msa1329660:three_prime_UTR 40.0%
TTCCCCAAAATTGAAATGGC+AGG + chr8_4:48363561-48363580 None:intergenic 40.0%
GCAGTTCCCCAAAATTGAAA+TGG + chr8_4:48363565-48363584 None:intergenic 40.0%
GAGATGTCTTCCATAGTAAG+AGG - chr8_4:48363605-48363624 Msa1329660:three_prime_UTR 40.0%
AGTTACGGCTTACATCAACA+TGG - chr8_4:48363738-48363757 Msa1329660:three_prime_UTR 40.0%
! ATAGTTTGGGCACGGATTAA+AGG + chr8_4:48363791-48363810 None:intergenic 40.0%
!!! GAAGTGTACCTTTTTTGTGG+TGG + chr8_4:48363834-48363853 None:intergenic 40.0%
!! AGGTCCGCTTTTACAATTTG+TGG + chr8_4:48364377-48364396 None:intergenic 40.0%
TTCTGCCAAACTCTATCTTC+AGG + chr8_4:48364457-48364476 None:intergenic 40.0%
!!! ATTACACCTGCTATTTTGGG+CGG + chr8_4:48364539-48364558 None:intergenic 40.0%
AATAAGTGATGTGTGCATGC+CGG - chr8_4:48365267-48365286 Msa1329660:intron 40.0%
!! CACAATAGAGCACCCTATTT+TGG + chr8_4:48365307-48365326 None:intergenic 40.0%
! CAAAATAGGGTGCTCTATTG+TGG - chr8_4:48365305-48365324 Msa1329660:intron 40.0%
!! AGAGTGTTCACTTTTGGCAA+AGG - chr8_4:48365663-48365682 Msa1329660:intron 40.0%
GTGTGTTAATTGTAGTTGGG+AGG - chr8_4:48365855-48365874 Msa1329660:CDS 40.0%
! TGTTGCCATTTCTGCTAAGT+TGG + chr8_4:48365889-48365908 None:intergenic 40.0%
TCTGTTGATATAGTGAGTCC+AGG + chr8_4:48365930-48365949 None:intergenic 40.0%
AGAACCTACCAAATGGTTTG+TGG - chr8_4:48365979-48365998 Msa1329660:CDS 40.0%
! GAACCTACCAAATGGTTTGT+GGG - chr8_4:48365980-48365999 Msa1329660:CDS 40.0%
AATGAAATGGAGGCCTTTCT+TGG - chr8_4:48366035-48366054 Msa1329660:CDS 40.0%
ATGAAATGGAGGCCTTTCTT+GGG - chr8_4:48366036-48366055 Msa1329660:CDS 40.0%
AAGCCTGGATTCTCTATGAT+TGG + chr8_4:48366384-48366403 None:intergenic 40.0%
AACAAATGTGATCGTAAGCC+TGG + chr8_4:48366399-48366418 None:intergenic 40.0%
!! GCATTGGTTCAACTCAACTT+AGG - chr8_4:48366469-48366488 Msa1329660:CDS 40.0%
TTGAATGATGAAGTGGTTGC+TGG - chr8_4:48366822-48366841 Msa1329660:CDS 40.0%
TGAATGATGAAGTGGTTGCT+GGG - chr8_4:48366823-48366842 Msa1329660:CDS 40.0%
CGTTTCTTAGACATGTTTGG+AGG - chr8_4:48366891-48366910 Msa1329660:intron 40.0%
CGTTCATTAACGGAGTGTAT+TGG + chr8_4:48367005-48367024 None:intergenic 40.0%
!! AACCAGATCTTTGAGATCGT+TGG + chr8_4:48367179-48367198 None:intergenic 40.0%
TAAATCAAGGAGCAAGTGTG+GGG + chr8_4:48367318-48367337 None:intergenic 40.0%
GTAAATCAAGGAGCAAGTGT+GGG + chr8_4:48367319-48367338 None:intergenic 40.0%
TGCTTCTTTGGATCTGCAAT+TGG + chr8_4:48367341-48367360 None:intergenic 40.0%
CTCCTATACTTATTAGCCCT+TGG + chr8_4:48367407-48367426 None:intergenic 40.0%
TGCCGTAAACATTCAATCCA+TGG - chr8_4:48367457-48367476 Msa1329660:intron 40.0%
TCCCATATTACCAAACACCA+TGG + chr8_4:48367477-48367496 None:intergenic 40.0%
ATGGGAAATACTTCAGGAAC+TGG - chr8_4:48367491-48367510 Msa1329660:CDS 40.0%
TTCACTAGAAATCCAAGCAC+TGG - chr8_4:48367521-48367540 Msa1329660:CDS 40.0%
TCACTAGAAATCCAAGCACT+GGG - chr8_4:48367522-48367541 Msa1329660:CDS 40.0%
GGAGTTTCTCATTAATGCTC+AGG - chr8_4:48367562-48367581 Msa1329660:CDS 40.0%
GACCATGAAAATTTGCATGC+CGG - chr8_4:48367791-48367810 Msa1329660:intron 40.0%
! ATCCGGCATGCAAATTTTCA+TGG + chr8_4:48367796-48367815 None:intergenic 40.0%
GGATGCTTATAAGGAACTTG+AGG - chr8_4:48367812-48367831 Msa1329660:intron 40.0%
GGATATTGAGTTCACTGTTC+AGG - chr8_4:48367987-48368006 Msa1329660:CDS 40.0%
! AGTGGAAAACGTACTGGTAA+AGG - chr8_4:48368039-48368058 Msa1329660:CDS 40.0%
AGCTGTAGATATGGTCAATG+AGG - chr8_4:48368074-48368093 Msa1329660:CDS 40.0%
GCTGTAGATATGGTCAATGA+GGG - chr8_4:48368075-48368094 Msa1329660:CDS 40.0%
CTGTAGATATGGTCAATGAG+GGG - chr8_4:48368076-48368095 Msa1329660:CDS 40.0%
TGAGGATCCATCTAAGTACA+AGG - chr8_4:48368491-48368510 Msa1329660:intron 40.0%
GAGACGACTCATATACCTAA+TGG - chr8_4:48368760-48368779 Msa1329660:intron 40.0%
CTTAGAGAAACCACACAAGT+GGG + chr8_4:48368824-48368843 None:intergenic 40.0%
AGCATAGTATGGATATCTCC+CGG - chr8_4:48368842-48368861 Msa1329660:CDS 40.0%
! AAAACAATTCCCGCTTTAGG+GGG - chr8_4:48368888-48368907 Msa1329660:CDS 40.0%
TCAGAGCAACATAACTGGAT+TGG + chr8_4:48369084-48369103 None:intergenic 40.0%
ATGGTCGTTTACTTGGATGT+CGG + chr8_4:48369373-48369392 None:intergenic 40.0%
! CCTTTTCATGGTCGTTTACT+TGG + chr8_4:48369380-48369399 None:intergenic 40.0%
CCAAGTAAACGACCATGAAA+AGG - chr8_4:48369377-48369396 Msa1329660:intron 40.0%
GGGGATAACGTAATATCAGA+AGG - chr8_4:48369498-48369517 Msa1329660:intron 40.0%
TGTCTTGGGCTGATGAAATA+AGG - chr8_4:48369616-48369635 Msa1329660:intron 40.0%
GCAATAGCAGCTAGACAAAA+CGG - chr8_4:48369776-48369795 Msa1329660:intron 40.0%
!!! TGAGGGAATTTTTCGAGCAA+TGG - chr8_4:48370098-48370117 Msa1329660:CDS 40.0%
!!! GGAATTTTTCGAGCAATGGA+TGG - chr8_4:48370102-48370121 Msa1329660:CDS 40.0%
CTAACAACCGGATTGTTACT+GGG + chr8_4:48370131-48370150 None:intergenic 40.0%
TCTAACAACCGGATTGTTAC+TGG + chr8_4:48370132-48370151 None:intergenic 40.0%
GGAAGAAATTCATGAAGTGG+AGG + chr8_4:48370156-48370175 None:intergenic 40.0%
TAGCAATTCAGTAGGGTTAG+AGG - chr8_4:48370395-48370414 Msa1329660:CDS 40.0%
AATTCAGTAGGGTTAGAGGA+GGG - chr8_4:48370399-48370418 Msa1329660:CDS 40.0%
! GTGGTTTGCAACCACAATTA+TGG - chr8_4:48370476-48370495 Msa1329660:intron 40.0%
TGTAACCACAACCACGATTT+AGG - chr8_4:48370519-48370538 Msa1329660:intron 40.0%
TTTGTCCTAAATCGTGGTTG+TGG + chr8_4:48370527-48370546 None:intergenic 40.0%
TACTCACTGAAATAGCAGCT+TGG + chr8_4:48370697-48370716 None:intergenic 40.0%
TACAGTCCTTCCAGAGATAA+TGG - chr8_4:48370727-48370746 Msa1329660:intron 40.0%
!! TGAGAAAGTGTTCTCTGAGA+TGG - chr8_4:48371069-48371088 Msa1329660:intron 40.0%
!! GAGAAAGTGTTCTCTGAGAT+GGG - chr8_4:48371070-48371089 Msa1329660:intron 40.0%
GGGCTCTTCATTAAGCTATA+AGG - chr8_4:48371090-48371109 Msa1329660:intron 40.0%
GACCTTACCCAAATGACATT+TGG - chr8_4:48371327-48371346 Msa1329660:intron 40.0%
TTTGCAGCATGATCCATTTG+AGG - chr8_4:48371404-48371423 Msa1329660:intron 40.0%
! TGTTACTCTTGTTTCATCCC+AGG - chr8_4:48371467-48371486 Msa1329660:intron 40.0%
! CTTTAGAGGTGTAGGATAAG+TGG - chr8_4:48371582-48371601 Msa1329660:intron 40.0%
GCAAAGAATGCAACAGAAGA+AGG + chr8_4:48371976-48371995 None:intergenic 40.0%
GTTGCATTCTTTGCTCAACT+TGG - chr8_4:48371982-48372001 Msa1329660:intron 40.0%
ATGTCTCATGTTCACCATTC+AGG - chr8_4:48372013-48372032 Msa1329660:intron 40.0%
TGATGCTCTTCAATTTGCCA+CGG - chr8_4:48372047-48372066 Msa1329660:intron 40.0%
TCAATTTGCAGCGTAAGGAA+CGG - chr8_4:48372203-48372222 Msa1329660:intron 40.0%
TTTGATTGCATACCGTGTCT+TGG - chr8_4:48372507-48372526 Msa1329660:five_prime_UTR 40.0%
! ATACCGTGTCTTGGTGTATT+TGG - chr8_4:48372516-48372535 Msa1329660:five_prime_UTR 40.0%
ACACCAAATACACCAAGACA+CGG + chr8_4:48372522-48372541 None:intergenic 40.0%
! TGGTGGGAGAAGAAGTACAA+AGG - chr8_4:48363697-48363716 Msa1329660:three_prime_UTR 45.0%
! GAAGAAGTACAAAGGTGCAG+TGG - chr8_4:48363705-48363724 Msa1329660:three_prime_UTR 45.0%
! AAGTACAAAGGTGCAGTGGA+AGG - chr8_4:48363709-48363728 Msa1329660:three_prime_UTR 45.0%
AGTGGAAGGAGTTGCAGTTA+CGG - chr8_4:48363723-48363742 Msa1329660:three_prime_UTR 45.0%
GAGTAAGGATAGTTTGGGCA+CGG + chr8_4:48363799-48363818 None:intergenic 45.0%
!! TGGGTGGTGTTATTGGAGTA+AGG + chr8_4:48363814-48363833 None:intergenic 45.0%
!! TTTGTGGTGGGTGGTGTTAT+TGG + chr8_4:48363821-48363840 None:intergenic 45.0%
AACACCACCCACCACAAAAA+AGG - chr8_4:48363823-48363842 Msa1329660:three_prime_UTR 45.0%
!!! TGTACCTTTTTTGTGGTGGG+TGG + chr8_4:48363830-48363849 None:intergenic 45.0%
!! GTGAAAGCGTAGCTTGTTTC+TGG - chr8_4:48364350-48364369 Msa1329660:intron 45.0%
TGCCAAACTCTATCTTCAGG+CGG + chr8_4:48364454-48364473 None:intergenic 45.0%
!!! TTACACCTGCTATTTTGGGC+GGG + chr8_4:48364538-48364557 None:intergenic 45.0%
GCCCAAAATAGCAGGTGTAA+TGG - chr8_4:48364538-48364557 Msa1329660:intron 45.0%
AAACAAGGCCATGAAGTCCT+TGG - chr8_4:48365698-48365717 Msa1329660:intron 45.0%
! ATTGGTTTATCTGTGCCTCC+TGG - chr8_4:48365909-48365928 Msa1329660:CDS 45.0%
GTTGATATAGTGAGTCCAGG+AGG + chr8_4:48365927-48365946 None:intergenic 45.0%
ATCTCCTCCCACAAACCATT+TGG + chr8_4:48365990-48366009 None:intergenic 45.0%
TTGTGGGAGGAGATACTTGA+AGG - chr8_4:48365996-48366015 Msa1329660:CDS 45.0%
GATTTCCATGCCTGGAATGA+TGG - chr8_4:48366779-48366798 Msa1329660:CDS 45.0%
AGAACTGTGTCCATCATTCC+AGG + chr8_4:48366792-48366811 None:intergenic 45.0%
TGGCTTCAAAAAGTGGAGAG+CGG - chr8_4:48366847-48366866 Msa1329660:intron 45.0%
AGCCAACGATCTCAAAGATC+TGG - chr8_4:48367174-48367193 Msa1329660:intron 45.0%
AGTGTCTACCTCGAAGCTAA+GGG - chr8_4:48367211-48367230 Msa1329660:intron 45.0%
! ACTTTTCTCCCTTAGCTTCG+AGG + chr8_4:48367222-48367241 None:intergenic 45.0%
AAGGGAGAAAAGTTTCCCTC+AGG - chr8_4:48367229-48367248 Msa1329660:intron 45.0%
AAGTTTCCCTCAGGTGCTAA+CGG - chr8_4:48367238-48367257 Msa1329660:intron 45.0%
GGTAAATCAAGGAGCAAGTG+TGG + chr8_4:48367320-48367339 None:intergenic 45.0%
TCAATTCTTGGGATAGCCCA+AGG - chr8_4:48367387-48367406 Msa1329660:intron 45.0%
CAATTCTTGGGATAGCCCAA+GGG - chr8_4:48367388-48367407 Msa1329660:intron 45.0%
GCCCAAGGGCTAATAAGTAT+AGG - chr8_4:48367402-48367421 Msa1329660:intron 45.0%
! CACTAGAAATCCAAGCACTG+GGG - chr8_4:48367523-48367542 Msa1329660:CDS 45.0%
! AGTTTCTTTTCCCCAGTGCT+TGG + chr8_4:48367536-48367555 None:intergenic 45.0%
ATCTTCAGGTGTCCTGATTC+CGG + chr8_4:48367766-48367785 None:intergenic 45.0%
TTGCATGCCGGATGCTTATA+AGG - chr8_4:48367803-48367822 Msa1329660:intron 45.0%
TGGATGTTGCAATGTCGAAG+TGG - chr8_4:48368021-48368040 Msa1329660:CDS 45.0%
TGTCGAAGTGGAAAACGTAC+TGG - chr8_4:48368033-48368052 Msa1329660:CDS 45.0%
AGGAGCTGATCAAGATGTTG+TGG + chr8_4:48368138-48368157 None:intergenic 45.0%
AAGCATATACCTGTGGGTGT+AGG + chr8_4:48368158-48368177 None:intergenic 45.0%
TCCTTGTGCATGCCATTGTT+CGG + chr8_4:48368592-48368611 None:intergenic 45.0%
GCTTAGAGAAACCACACAAG+TGG + chr8_4:48368825-48368844 None:intergenic 45.0%
! ATGGATATCTCCCGGTGTTT+TGG - chr8_4:48368850-48368869 Msa1329660:CDS 45.0%
ACATAGGTGACCAAAACACC+GGG + chr8_4:48368863-48368882 None:intergenic 45.0%
CACATAGGTGACCAAAACAC+CGG + chr8_4:48368864-48368883 None:intergenic 45.0%
TAGGTGACAAGTGCATGTTC+TGG - chr8_4:48368915-48368934 Msa1329660:CDS 45.0%
TTCTGGACTCACACTCGAAA+GGG - chr8_4:48368932-48368951 Msa1329660:CDS 45.0%
TGGTCTCAGAGCAACATAAC+TGG + chr8_4:48369089-48369108 None:intergenic 45.0%
!! ATGTTGCTCTGAGACCAACA+TGG - chr8_4:48369092-48369111 Msa1329660:intron 45.0%
CGACCATGAAAAGGTAACCT+TGG - chr8_4:48369386-48369405 Msa1329660:intron 45.0%
GGAGAATGGATCTCGTTGAA+TGG - chr8_4:48369519-48369538 Msa1329660:intron 45.0%
ATCTCGTTGAATGGATCCAC+AGG - chr8_4:48369528-48369547 Msa1329660:intron 45.0%
TGAGGTGATACTTGGAAAGC+AGG - chr8_4:48369551-48369570 Msa1329660:intron 45.0%
CTAGCTGCTATTGCATCTTC+AGG + chr8_4:48369770-48369789 None:intergenic 45.0%
ACTTTGCAGGACAGAACACA+TGG - chr8_4:48369814-48369833 Msa1329660:intron 45.0%
GGCCGTGAGAATGATGATAT+TGG - chr8_4:48370011-48370030 Msa1329660:CDS 45.0%
TGGCTATTACGCAAGAACAG+AGG - chr8_4:48370031-48370050 Msa1329660:CDS 45.0%
ATGGTCTCCCAGTAACAATC+CGG - chr8_4:48370121-48370140 Msa1329660:CDS 45.0%
GAAGTGGAGGATCTAACAAC+CGG + chr8_4:48370143-48370162 None:intergenic 45.0%
GGTGAACTAACTTCTCAGAC+AGG - chr8_4:48370201-48370220 Msa1329660:intron 45.0%
!! AATCCCATGCTTGGTTTTCG+TGG - chr8_4:48370273-48370292 Msa1329660:intron 45.0%
CAATTCAGTAGGGTTAGAGG+AGG - chr8_4:48370398-48370417 Msa1329660:CDS 45.0%
TCCTGAATTGACTGAGATGC+AGG - chr8_4:48370658-48370677 Msa1329660:intron 45.0%
! GCTATTTCAGTGAGTAGCCA+TGG - chr8_4:48370701-48370720 Msa1329660:intron 45.0%
CTGGAAGGACTGTAATACCA+TGG + chr8_4:48370721-48370740 None:intergenic 45.0%
GTGGAACCATTATCTCTGGA+AGG + chr8_4:48370736-48370755 None:intergenic 45.0%
ACGAGTGGAACCATTATCTC+TGG + chr8_4:48370740-48370759 None:intergenic 45.0%
! GAGATAATGGTTCCACTCGT+CGG - chr8_4:48370740-48370759 Msa1329660:intron 45.0%
! CTCGATCCTTTTTAACCGAC+AGG - chr8_4:48371009-48371028 Msa1329660:intron 45.0%
! TGTCATTTGGGTAAGGTCGT+TGG + chr8_4:48371325-48371344 None:intergenic 45.0%
TTCCTACATACCTATCCGCA+GGG - chr8_4:48371379-48371398 Msa1329660:intron 45.0%
ATCATGCTGCAAAATCCCTG+CGG + chr8_4:48371397-48371416 None:intergenic 45.0%
TAGTTCCATAGTCGTGTGAC+CGG - chr8_4:48371428-48371447 Msa1329660:intron 45.0%
CCACCTCCGATTTAGCAAAT+AGG + chr8_4:48371657-48371676 None:intergenic 45.0%
! CCTATTTGCTAAATCGGAGG+TGG - chr8_4:48371654-48371673 Msa1329660:intron 45.0%
! GTACTTGACCAGAAAGGTGT+GGG - chr8_4:48371744-48371763 Msa1329660:intron 45.0%
GTTGGAATATGTGGAGAGCA+TGG - chr8_4:48371943-48371962 Msa1329660:intron 45.0%
TGGTGTATAAGACACTGGTG+TGG - chr8_4:48372536-48372555 Msa1329660:five_prime_UTR 45.0%
!! AAAATAAAATAAAAAACAAA+GGG - chr8_4:48364660-48364679 Msa1329660:intron 5.0%
!! TATATATATATGTTAAATTT+AGG - chr8_4:48367066-48367085 Msa1329660:intron 5.0%
!! TATTCTTAATATTTATATTA+TGG - chr8_4:48371873-48371892 Msa1329660:intron 5.0%
ACTCTATCTTCAGGCGGGAT+CGG + chr8_4:48364448-48364467 None:intergenic 50.0%
TCCCGCCTGAAGATAGAGTT+TGG - chr8_4:48364449-48364468 Msa1329660:intron 50.0%
GCCAAACTCTATCTTCAGGC+GGG + chr8_4:48364453-48364472 None:intergenic 50.0%
TTCAACCCGCCCAAAATAGC+AGG - chr8_4:48364530-48364549 Msa1329660:intron 50.0%
GGGAGCCAACTTAGCAGAAA+TGG - chr8_4:48365881-48365900 Msa1329660:CDS 50.0%
CCTCCCACAAACCATTTGGT+AGG + chr8_4:48365986-48366005 None:intergenic 50.0%
! CCTACCAAATGGTTTGTGGG+AGG - chr8_4:48365983-48366002 Msa1329660:CDS 50.0%
!! GAGAGGAGGAGAGGTTTTGA+AGG + chr8_4:48366065-48366084 None:intergenic 50.0%
TGTGTCCATCATTCCAGGCA+TGG + chr8_4:48366787-48366806 None:intergenic 50.0%
TGATGAAGTGGTTGCTGGGT+TGG - chr8_4:48366827-48366846 Msa1329660:CDS 50.0%
!! GCTGGGTTGGCTTCAAAAAG+TGG - chr8_4:48366840-48366859 Msa1329660:intron 50.0%
GAGTGTCTACCTCGAAGCTA+AGG - chr8_4:48367210-48367229 Msa1329660:intron 50.0%
TAGGGAGAGGATGTAGTTGC+CGG - chr8_4:48367744-48367763 Msa1329660:intron 50.0%
AGGATGTAGTTGCCGGAATC+AGG - chr8_4:48367751-48367770 Msa1329660:intron 50.0%
AAGGACAAAGTGGTTGCCAC+TGG - chr8_4:48368510-48368529 Msa1329660:CDS 50.0%
GAGAAACCACACAAGTGGGT+CGG + chr8_4:48368820-48368839 None:intergenic 50.0%
!!! CGGTGTTTTGGTCACCTATG+TGG - chr8_4:48368862-48368881 Msa1329660:CDS 50.0%
! GTTCTGGACTCACACTCGAA+AGG - chr8_4:48368931-48368950 Msa1329660:CDS 50.0%
AAGGACAGAGACAAGTCCAG+AGG - chr8_4:48369236-48369255 Msa1329660:CDS 50.0%
GAGACAAGTCCAGAGGATGT+CGG - chr8_4:48369243-48369262 Msa1329660:CDS 50.0%
AGACAAGTCCAGAGGATGTC+GGG - chr8_4:48369244-48369263 Msa1329660:CDS 50.0%
GTTGGCATCTTGACAGCTAG+AGG - chr8_4:48369282-48369301 Msa1329660:CDS 50.0%
ACAACACTTTCCCCATCCAC+GGG + chr8_4:48369337-48369356 None:intergenic 50.0%
CACAACACTTTCCCCATCCA+CGG + chr8_4:48369338-48369357 None:intergenic 50.0%
!! TGGGGAAAGTGTTGTGTGTC+TGG - chr8_4:48369342-48369361 Msa1329660:intron 50.0%
GTTGAATGGATCCACAGGTG+AGG - chr8_4:48369533-48369552 Msa1329660:intron 50.0%
TCCACAGGTGAGGTGATACT+TGG - chr8_4:48369543-48369562 Msa1329660:intron 50.0%
TCCAAGTATCACCTCACCTG+TGG + chr8_4:48369547-48369566 None:intergenic 50.0%
AAAGCAGGCACTTTCTCCTC+CGG - chr8_4:48369566-48369585 Msa1329660:intron 50.0%
AAATCATCGCTTAGAGCCGG+AGG + chr8_4:48369585-48369604 None:intergenic 50.0%
!! TCCGGCTCTAAGCGATGATT+TGG - chr8_4:48369584-48369603 Msa1329660:intron 50.0%
CCCAAATCATCGCTTAGAGC+CGG + chr8_4:48369588-48369607 None:intergenic 50.0%
!! CCGGCTCTAAGCGATGATTT+GGG - chr8_4:48369585-48369604 Msa1329660:intron 50.0%
CAAAACGGTGCGCAAGGAAT+TGG - chr8_4:48369791-48369810 Msa1329660:intron 50.0%
CGCAAGGAATTGGACTTTGC+AGG - chr8_4:48369801-48369820 Msa1329660:intron 50.0%
CAGCCACGAAAACCAAGCAT+GGG + chr8_4:48370279-48370298 None:intergenic 50.0%
GCCTGCATCTCAGTCAATTC+AGG + chr8_4:48370662-48370681 None:intergenic 50.0%
TAGCAGCTTGGAAAACGGCA+CGG + chr8_4:48370685-48370704 None:intergenic 50.0%
TCTGCAACTAGTGCAGCTCT+TGG + chr8_4:48371136-48371155 None:intergenic 50.0%
AGCTGCACTAGTTGCAGATG+AGG - chr8_4:48371138-48371157 Msa1329660:intron 50.0%
CTTCCTACATACCTATCCGC+AGG - chr8_4:48371378-48371397 Msa1329660:intron 50.0%
ATCCCTGCGGATAGGTATGT+AGG + chr8_4:48371384-48371403 None:intergenic 50.0%
AATCACCGGTCACACGACTA+TGG + chr8_4:48371436-48371455 None:intergenic 50.0%
GGATAAGTGGGAGCTGGAAA+TGG - chr8_4:48371595-48371614 Msa1329660:intron 50.0%
CTGCAGGTACTTGACCAGAA+AGG - chr8_4:48371738-48371757 Msa1329660:intron 50.0%
GGTACTTGACCAGAAAGGTG+TGG - chr8_4:48371743-48371762 Msa1329660:intron 50.0%
! TGAGTTGACCCACACCTTTC+TGG + chr8_4:48371755-48371774 None:intergenic 50.0%
! GGAATATGTGGAGAGCATGG+CGG - chr8_4:48371946-48371965 Msa1329660:intron 50.0%
! GAATATGTGGAGAGCATGGC+GGG - chr8_4:48371947-48371966 Msa1329660:intron 50.0%
! AATATGTGGAGAGCATGGCG+GGG - chr8_4:48371948-48371967 Msa1329660:intron 50.0%
GCTGCTGCAAGTCTAGCAAT+CGG + chr8_4:48372183-48372202 None:intergenic 50.0%
GCAGCTCAATTTGCAGCGTA+AGG - chr8_4:48372198-48372217 Msa1329660:intron 50.0%
TCTATCTTCAGGCGGGATCG+GGG + chr8_4:48364446-48364465 None:intergenic 55.0%
CTCTATCTTCAGGCGGGATC+GGG + chr8_4:48364447-48364466 None:intergenic 55.0%
TGATCAGCTCCTACACCCAC+AGG - chr8_4:48368146-48368165 Msa1329660:intron 55.0%
CTGCTGAAGCTGCCGAACAA+TGG - chr8_4:48368577-48368596 Msa1329660:CDS 55.0%
GCCGAACAATGGCATGCACA+AGG - chr8_4:48368588-48368607 Msa1329660:CDS 55.0%
CCACACAAGTGGGTCGGAAT+TGG + chr8_4:48368814-48368833 None:intergenic 55.0%
CCAATTCCGACCCACTTGTG+TGG - chr8_4:48368811-48368830 Msa1329660:intron 55.0%
ACCTATGCTCCCCCTAAAGC+GGG + chr8_4:48368900-48368919 None:intergenic 55.0%
CACCTATGCTCCCCCTAAAG+CGG + chr8_4:48368901-48368920 None:intergenic 55.0%
GACAAGTCCAGAGGATGTCG+GGG - chr8_4:48369245-48369264 Msa1329660:CDS 55.0%
ACAAGTCCAGAGGATGTCGG+GGG - chr8_4:48369246-48369265 Msa1329660:CDS 55.0%
GGCATCTTGACAGCTAGAGG+TGG - chr8_4:48369285-48369304 Msa1329660:CDS 55.0%
TGCTGTTGTAGCCCGTGGAT+GGG - chr8_4:48369323-48369342 Msa1329660:intron 55.0%
GCTAGACAAAACGGTGCGCA+AGG - chr8_4:48369785-48369804 Msa1329660:intron 55.0%
GCAGCCACGAAAACCAAGCA+TGG + chr8_4:48370280-48370299 None:intergenic 55.0%
!! TGCTTGGTTTTCGTGGCTGC+AGG - chr8_4:48370280-48370299 Msa1329660:intron 55.0%
GTAGGGTTAGAGGAGGGACA+TGG - chr8_4:48370405-48370424 Msa1329660:CDS 55.0%
!! AGAGGAGGGACATGGTGGAT+TGG - chr8_4:48370413-48370432 Msa1329660:intron 55.0%
!! GAGGAGGGACATGGTGGATT+GGG - chr8_4:48370414-48370433 Msa1329660:intron 55.0%
!! AGGAGGGACATGGTGGATTG+GGG - chr8_4:48370415-48370434 Msa1329660:intron 55.0%
AGCAGCTTGGAAAACGGCAC+GGG + chr8_4:48370684-48370703 None:intergenic 55.0%
GCTGCAAAATCCCTGCGGAT+AGG + chr8_4:48371392-48371411 None:intergenic 55.0%
GGTGTAGGATAAGTGGGAGC+TGG - chr8_4:48371589-48371608 Msa1329660:intron 55.0%
TATCTTCAGGCGGGATCGGG+GGG + chr8_4:48364444-48364463 None:intergenic 60.0%
CTATCTTCAGGCGGGATCGG+GGG + chr8_4:48364445-48364464 None:intergenic 60.0%
GGGTTGCCGTTAGCACCTGA+GGG + chr8_4:48367247-48367266 None:intergenic 60.0%
AGGGGATGCAGGCAAACCAG+TGG + chr8_4:48368529-48368548 None:intergenic 60.0%
!! ACTGGTTTGCCTGCATCCCC+TGG - chr8_4:48368528-48368547 Msa1329660:CDS 60.0%
CATCCCCTGGAGCTGCAGTT+GGG - chr8_4:48368541-48368560 Msa1329660:CDS 60.0%
!! TCCCGCTTTAGGGGGAGCAT+AGG - chr8_4:48368896-48368915 Msa1329660:CDS 60.0%
! GGGGGCATGCATTCAGCTGT+TGG - chr8_4:48369264-48369283 Msa1329660:CDS 60.0%
CATGCTGCTGTTGTAGCCCG+TGG - chr8_4:48369318-48369337 Msa1329660:intron 60.0%
CTGCTGTTGTAGCCCGTGGA+TGG - chr8_4:48369322-48369341 Msa1329660:intron 60.0%
GCTGTTGTAGCCCGTGGATG+GGG - chr8_4:48369324-48369343 Msa1329660:intron 60.0%
GGGTTAGAGGAGGGACATGG+TGG - chr8_4:48370408-48370427 Msa1329660:intron 60.0%
TCCACTCGTCGGTACACCTC+AGG - chr8_4:48370751-48370770 Msa1329660:intron 60.0%
GAGCGCACAGAGAGGAGGAG+AGG + chr8_4:48366074-48366093 None:intergenic 65.0%
CTCCTCCTCTCTGTGCGCTC+TGG - chr8_4:48366074-48366093 Msa1329660:CDS 65.0%
CACCAGAGCGCACAGAGAGG+AGG + chr8_4:48366079-48366098 None:intergenic 65.0%
CAGCACCAGAGCGCACAGAG+AGG + chr8_4:48366082-48366101 None:intergenic 65.0%
! CTCTGTGCGCTCTGGTGCTG+CGG - chr8_4:48366082-48366101 Msa1329660:CDS 65.0%
GGGGTTGCCGTTAGCACCTG+AGG + chr8_4:48367248-48367267 None:intergenic 65.0%
ACTGCAGCTCCAGGGGATGC+AGG + chr8_4:48368540-48368559 None:intergenic 65.0%
GCATCCCCTGGAGCTGCAGT+TGG - chr8_4:48368540-48368559 Msa1329660:CDS 65.0%
CTGCCCAACTGCAGCTCCAG+GGG + chr8_4:48368547-48368566 None:intergenic 65.0%
CCTGCCCAACTGCAGCTCCA+GGG + chr8_4:48368548-48368567 None:intergenic 65.0%
ACCTGCCCAACTGCAGCTCC+AGG + chr8_4:48368549-48368568 None:intergenic 65.0%
TGCATGCCCCCGACATCCTC+TGG + chr8_4:48369255-48369274 None:intergenic 65.0%
! GCCTGAGGTGTACCGACGAG+TGG + chr8_4:48370755-48370774 None:intergenic 65.0%
CCCTGGAGCTGCAGTTGGGC+AGG - chr8_4:48368545-48368564 Msa1329660:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 48363478 48372611 48363478 ID=Msa1329660;Name=Msa1329660
chr8_4 mRNA 48363478 48372611 48363478 ID=Msa1329660-mRNA-1;Parent=Msa1329660;Name=Msa1329660-mRNA-1;_AED=0.11;_eAED=0.11;_QI=130|1|1|1|1|1|19|393|951
chr8_4 exon 48363478 48363913 48363478 ID=Msa1329660-mRNA-1:exon:13918;Parent=Msa1329660-mRNA-1
chr8_4 exon 48364055 48364146 48364055 ID=Msa1329660-mRNA-1:exon:13917;Parent=Msa1329660-mRNA-1
chr8_4 exon 48364268 48364345 48364268 ID=Msa1329660-mRNA-1:exon:13916;Parent=Msa1329660-mRNA-1
chr8_4 exon 48364664 48364801 48364664 ID=Msa1329660-mRNA-1:exon:13915;Parent=Msa1329660-mRNA-1
chr8_4 exon 48364930 48365058 48364930 ID=Msa1329660-mRNA-1:exon:13914;Parent=Msa1329660-mRNA-1
chr8_4 exon 48365317 48365446 48365317 ID=Msa1329660-mRNA-1:exon:13913;Parent=Msa1329660-mRNA-1
chr8_4 exon 48365788 48366104 48365788 ID=Msa1329660-mRNA-1:exon:13912;Parent=Msa1329660-mRNA-1
chr8_4 exon 48366254 48366343 48366254 ID=Msa1329660-mRNA-1:exon:13911;Parent=Msa1329660-mRNA-1
chr8_4 exon 48366442 48366603 48366442 ID=Msa1329660-mRNA-1:exon:13910;Parent=Msa1329660-mRNA-1
chr8_4 exon 48366691 48366855 48366691 ID=Msa1329660-mRNA-1:exon:13909;Parent=Msa1329660-mRNA-1
chr8_4 exon 48367463 48367600 48367463 ID=Msa1329660-mRNA-1:exon:13908;Parent=Msa1329660-mRNA-1
chr8_4 exon 48367922 48368101 48367922 ID=Msa1329660-mRNA-1:exon:13907;Parent=Msa1329660-mRNA-1
chr8_4 exon 48368214 48368342 48368214 ID=Msa1329660-mRNA-1:exon:13906;Parent=Msa1329660-mRNA-1
chr8_4 exon 48368506 48368741 48368506 ID=Msa1329660-mRNA-1:exon:13905;Parent=Msa1329660-mRNA-1
chr8_4 exon 48368839 48369001 48368839 ID=Msa1329660-mRNA-1:exon:13904;Parent=Msa1329660-mRNA-1
chr8_4 exon 48369172 48369309 48369172 ID=Msa1329660-mRNA-1:exon:13903;Parent=Msa1329660-mRNA-1
chr8_4 exon 48369986 48370219 48369986 ID=Msa1329660-mRNA-1:exon:13902;Parent=Msa1329660-mRNA-1
chr8_4 exon 48370370 48370426 48370370 ID=Msa1329660-mRNA-1:exon:13901;Parent=Msa1329660-mRNA-1
chr8_4 exon 48372245 48372611 48372245 ID=Msa1329660-mRNA-1:exon:13900;Parent=Msa1329660-mRNA-1
chr8_4 five_prime_UTR 48372482 48372611 48372482 ID=Msa1329660-mRNA-1:five_prime_utr;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48372245 48372481 48372245 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48370370 48370426 48370370 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48369986 48370219 48369986 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48369172 48369309 48369172 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48368839 48369001 48368839 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48368506 48368741 48368506 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48368214 48368342 48368214 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48367922 48368101 48367922 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48367463 48367600 48367463 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48366691 48366855 48366691 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48366442 48366603 48366442 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48366254 48366343 48366254 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48365788 48366104 48365788 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48365317 48365446 48365317 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48364930 48365058 48364930 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48364664 48364801 48364664 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48364268 48364345 48364268 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48364055 48364146 48364055 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 CDS 48363871 48363913 48363871 ID=Msa1329660-mRNA-1:cds;Parent=Msa1329660-mRNA-1
chr8_4 three_prime_UTR 48363478 48363870 48363478 ID=Msa1329660-mRNA-1:three_prime_utr;Parent=Msa1329660-mRNA-1
Gene Sequence

>Msa1329660

ATGTCTTCCATAGTAAGAGGCATAGTCATAAGGAACACATCAACATCAGATAATAGGATTTTCAAAGGGAACAAGAATGATGTTAGTGTTGGTGGGAGAAGAAGTACAAAGGTGCAGTGGAAGGAGTTGCAGTTACGGCTTACATCAACATGGAAAGCTAGAAGAACAAGTACATATCAGCCTTTAATCCGTGCCCAAACTATCCTTACTCCAATAACACCACCCACCACAAAAAAGAGAGTGTTCACTTTTGGCAAAGGTAAAAGTGAAGGAAACAAGGCCATGAAGTCCTTGTTGGGAGGAAAGGGAGCCAACTTAGCAGAAATGGCAACAATTGGTTTATCTGTGCCTCCTGGACTCACTATATCAACAGAAGCATGTCAAGAATATCAACAAAATGAAAAGAACCTACCAAATGGTTTGTGGGAGGAGATACTTGAAGGCCTTAGATTTGTTGAAAATGAAATGGAGGCCTTTCTTGGGAATCCTTCAAAACCTCTCCTCCTCTCTGTGCGCTCTGGTGCTGCGATTTCCATGCCTGGAATGATGGACACAGTTCTTAATCTTGGATTGAATGATGAAGTGGTTGCTGGGTTGGCTTCAAAAAGTGGAGAGCGGTTTGCTTACGATTCTTATAGACGTTTCTTAGACATGTTTGGAGGTGTTGTATTGGACATTCCACATTCATTGTTTGAGGAGAAGTTAGAAAAGCTAAAGTATTCAAAAGGCGTTAAACATGACACTGATCTAACAGCCAACGATCTCAAAGATCTGGTTGAGCAGTACAAGAGTGTCTACCTCGAAGCTAAGGGAGAAAAGTTTCCCTCAGATCCAAAGAAGCAACTAGAATTAGCTGTTAAAGCTGTTTTCAATTCTTGGGATAGCCCAAGGGCTAATAAGTATAGGAGCATTAATCAGATAACTGGACTAGTGGGCACTGCCGTAAACATTCAATCCATGGTGTTTGGTAATATGGGAAATACTTCAGGAACTGGCGTTTTATTCACTAGAAATCCAAGCACTGGGGAAAAGAAACTTTATGGGGAGTTTCTCATTAATGCTCAGGGAGAGGATGTAGTTGCCGGAATCAGGACACCTGAAGATTTAGAGACCATGAAAATTTGCATGCCGGATGCTTATAAGGAACTTGAGGAGAATTGTAAGATTCTAGAGAATCATTACAAGGATATGATGGATATTGAGTTCACTGTTCAGGAAAATAGATTGTGGATGTTGCAATGTCGAAGTGGAAAACGTACTGGTAAAGGTGCAATCAAAATAGCTGTAGATATGGTCAATGAGGGGCTTGTTGATATTCGTTCTGCAATCAAGATGGTAGAGCCACAACATCTTGATCAGCTCCTACACCCACAGTTTGAGGATCCATCTAAGTACAAGGACAAAGTGGTTGCCACTGGTTTGCCTGCATCCCCTGGAGCTGCAGTTGGGCAGGTTGTGTTCACTGCTGAAGCTGCCGAACAATGGCATGCACAAGGAAAAAGTGCAATTTTGGTAAGGACAGAGACAAGTCCAGAGGATGTCGGGGGCATGCATTCAGCTGTTGGCATCTTGACAGCTAGAGGTGGTATGACATCTCATGCTGCTGTTGTAGCCCGTGGATGGGGAAAGTGTTGTGTGTCTGGTTGCTCCGACATCCAAGTAAACGACCATGAAAAGGTGGTTGTAATTGGGGATAACGTAATATCAGAAGGAGAATGGATCTCGTTGAATGGATCCACAGGTGAGGTGATACTTGGAAAGCAGGCACTTTCTCCTCCGGCTCTAAGCGATGATTTGGGAACTTTCATGTCTTGGGCTGATGAAATAAGGAATCTGAAGGTTTTGGCAAATGCTGACACACCTGAAGATGCAATAGCAGCTAGACAAAACGGTGCGCAAGGAATTGGACTTTGCAGGACAGAACACATGTTTTTTGCTTCAGATGAAAGGATAAAGGCCGTGAGAATGATGATATTGGCTATTACGCAAGAACAGAGGAAAGCTGCACTTGATTTGTTGTTACCTTATCAAAGATCAGATTTTGAGGGAATTTTTCGAGCAATGGATGGTCTCCCAGTAACAATCCGGTTGTTAGATCCTCCACTTCATGAATTTCTTCCTGAAGGTGATTTAAATGAAATTGTTGGTGAACTAACTTCTCAGACAGGCATGAAAGAAGAAGAAATAGTCTCTAGGATAGAAAAACTCTTTGAAGTTAATCCCATGCTTGGTTTTCGTGGCTGCAGGTTGGGAATATCATATCCTGAATTGACTGAGATGCAGGCCCGTGCCGTTTTCCAAGCTGCTATTTCAGTGAGTAGCCATGGTATTACAGTCCTTCCAGAGATAATGGTTCCACTCGTCGGTACACCTCAGGAATTAAGACATCAAGTGAGTTTAATAAGGAACGTTGCTGAGAAAGTGTTCTCTGAGATGGGCTCTTCATTAAGCTATAAGGTTGGAACTATGATAGAAGTTCCAAGAGCTGCACTAGTTGCAGATGAGATTGCAAATGAAGCCGATTTCTTTTCATTTGGAACCAACGACCTTACCCAAATGACATTTGGTTACAGTAGAGATGATGTTAGTAAGTTTCTTCCTACATACCTATCCGCAGGGATTTTGCAGCATGATCCATTTGAGGTACTTGACCAGAAAGGTGTGGGTCAACTCATCAAAATTTGCACAGAAAAGGGTCGTGCTGCTAAACCAAATTTGAAGGTTGGAATATGTGGAGAGCATGGCGGGGAGCCTTCTTCTGTTGCATTCTTTGCTCAACTTGGACTTGACTATGTCTCATGTTCACCATTCAGGGTTCCGATTGCTAGACTTGCAGCAGCTCAATTTGCAGCGTAA
Protein sequence

>Msa1329660

MSSIVRGIVIRNTSTSDNRIFKGNKNDVSVGGRRSTKVQWKELQLRLTSTWKARRTSTYQPLIRAQTILTPITPPTTKKRVFTFGKGKSEGNKAMKSLLGGKGANLAEMATIGLSVPPGLTISTEACQEYQQNEKNLPNGLWEEILEGLRFVENEMEAFLGNPSKPLLLSVRSGAAISMPGMMDTVLNLGLNDEVVAGLASKSGERFAYDSYRRFLDMFGGVVLDIPHSLFEEKLEKLKYSKGVKHDTDLTANDLKDLVEQYKSVYLEAKGEKFPSDPKKQLELAVKAVFNSWDSPRANKYRSINQITGLVGTAVNIQSMVFGNMGNTSGTGVLFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPEDLETMKICMPDAYKELEENCKILENHYKDMMDIEFTVQENRLWMLQCRSGKRTGKGAIKIAVDMVNEGLVDIRSAIKMVEPQHLDQLLHPQFEDPSKYKDKVVATGLPASPGAAVGQVVFTAEAAEQWHAQGKSAILVRTETSPEDVGGMHSAVGILTARGGMTSHAAVVARGWGKCCVSGCSDIQVNDHEKVVVIGDNVISEGEWISLNGSTGEVILGKQALSPPALSDDLGTFMSWADEIRNLKVLANADTPEDAIAARQNGAQGIGLCRTEHMFFASDERIKAVRMMILAITQEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLNEIVGELTSQTGMKEEEIVSRIEKLFEVNPMLGFRGCRLGISYPELTEMQARAVFQAAISVSSHGITVLPEIMVPLVGTPQELRHQVSLIRNVAEKVFSEMGSSLSYKVGTMIEVPRAALVADEIANEADFFSFGTNDLTQMTFGYSRDDVSKFLPTYLSAGILQHDPFEVLDQKGVGQLIKICTEKGRAAKPNLKVGICGEHGGEPSSVAFFAQLGLDYVSCSPFRVPIARLAAAQFAA*