AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297540 MtrunA17_Chr4g0054741 97.378 534 14 0 1 534 1 534 0.0 1076
Msa1297540 MtrunA17_Chr4g0054771 87.696 382 47 0 151 532 3 384 0.0 675
Msa1297540 MtrunA17_Chr5g0400471 72.591 467 87 6 105 534 3 465 0.0 639
Msa1297540 MtrunA17_Chr1g0212201 57.621 538 214 4 9 534 1 536 0.0 624
Msa1297540 MtrunA17_Chr1g0212251 58.912 533 200 6 16 534 5 532 0.0 615
Msa1297540 MtrunA17_Chr1g0212291 58.473 537 205 5 11 532 1 534 0.0 598
Msa1297540 MtrunA17_Chr1g0188881 35.258 485 251 9 25 504 23 449 5.72e-96 300
Msa1297540 MtrunA17_Chr1g0188871 38.832 394 218 5 23 399 4 391 1.33e-92 291
Msa1297540 MtrunA17_Chr4g0025591 44.807 337 179 4 36 370 29 360 1.54e-92 290
Msa1297540 MtrunA17_Chr7g0267471 43.314 344 185 3 49 389 42 378 1.11e-86 276
Msa1297540 MtrunA17_Chr2g0321971 36.765 408 241 7 49 446 37 437 2.71e-84 268
Msa1297540 MtrunA17_Chr6g0484691 32.696 523 298 10 22 505 69 576 3.20e-81 265
Msa1297540 MtrunA17_Chr7g0259731 39.881 336 181 6 54 381 61 383 1.01e-79 256
Msa1297540 MtrunA17_Chr1g0210101 34.086 487 286 10 48 511 112 586 1.30e-79 260
Msa1297540 MtrunA17_Chr2g0321961 39.595 346 201 4 49 391 37 377 5.61e-79 254
Msa1297540 MtrunA17_Chr8g0390931 33.400 497 279 9 49 505 59 543 1.50e-78 257
Msa1297540 MtrunA17_Chr4g0054761 91.391 151 13 0 1 151 1 151 2.51e-77 240
Msa1297540 MtrunA17_Chr8g0390921 32.227 512 302 11 35 505 46 553 4.07e-75 248
Msa1297540 MtrunA17_Chr8g0390901 31.891 439 261 9 103 505 9 445 9.05e-64 215
Msa1297540 MtrunA17_Chr5g0400481 63.793 116 34 2 1 108 1 116 6.14e-44 151
Msa1297540 MtrunA17_Chr8g0390911 45.070 71 38 1 35 104 50 120 7.51e-15 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297540 AT4G17970.1 62.795 551 142 8 1 506 1 533 0.0 665
Msa1297540 AT5G46610.1 58.802 551 179 9 1 519 1 535 0.0 614
Msa1297540 AT5G46600.1 57.491 534 186 5 10 516 17 536 0.0 602
Msa1297540 AT5G46610.2 55.172 551 175 10 1 519 1 511 0.0 559
Msa1297540 AT5G46610.3 52.087 551 169 10 1 519 1 488 1.15e-178 512
Msa1297540 AT4G00910.1 35.356 478 256 7 45 519 54 481 9.84e-96 300
Msa1297540 AT1G08440.1 43.218 317 176 2 49 363 13 327 4.55e-88 280
Msa1297540 AT3G18440.1 33.204 515 303 9 43 518 73 585 3.95e-83 270
Msa1297540 AT1G08430.1 38.551 345 208 2 49 389 13 357 5.58e-80 259
Msa1297540 AT1G18420.1 34.000 500 288 12 46 505 80 577 3.18e-79 259
Msa1297540 AT3G11680.2 39.726 365 213 2 27 389 16 375 5.24e-78 254
Msa1297540 AT3G11680.1 39.726 365 213 2 27 389 14 373 6.77e-78 253
Msa1297540 AT1G18420.2 33.871 496 286 12 50 505 1 494 1.15e-77 253
Msa1297540 AT2G27240.2 40.413 339 184 4 49 379 13 341 2.11e-75 246
Msa1297540 AT2G27240.1 38.017 363 185 5 49 379 13 367 2.61e-72 239
Msa1297540 AT2G17470.1 31.006 487 304 11 49 508 31 512 5.16e-68 229
Msa1297540 AT2G17470.2 31.006 487 304 11 49 508 53 534 7.88e-68 229
Msa1297540 AT1G68600.1 29.714 525 324 14 20 505 11 529 1.11e-65 223
Msa1297540 AT1G25480.1 30.800 500 303 12 44 505 47 541 2.28e-65 222
Msa1297540 AT4G17585.1 58.095 105 31 4 1 103 1 94 1.06e-23 97.8

Find 133 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTTCAGCTTTGTTAAAT+TGG 0.126341 8_3:+57923399 Msa1297540:CDS
ATCTGTTCGAGTCCTGTTTA+AGG 0.156833 8_3:+57923127 Msa1297540:CDS
TCATAATTCTTCTTTATATA+AGG 0.201014 8_3:-57921776 None:intergenic
TGTATCATTGCTTTATATAT+TGG 0.204199 8_3:+57920945 Msa1297540:CDS
GCCTTATAACCTTTGTATAT+TGG 0.218651 8_3:-57922173 None:intergenic
CAAAGGTTATAAGGCTGTTT+TGG 0.221522 8_3:+57922181 Msa1297540:CDS
CTGTTCAGCTGATACACTTT+TGG 0.231447 8_3:-57923426 None:intergenic
TGACAGCCCAAATTGCATTT+TGG 0.233586 8_3:-57920990 None:intergenic
GGAAATGTTCTTCGCCAATT+TGG 0.242345 8_3:+57922566 Msa1297540:CDS
ATATTGGAGCCACTCTTTAA+AGG 0.248165 8_3:+57920961 Msa1297540:CDS
CGGCATACCTTCTATAGATT+TGG 0.257767 8_3:-57922005 None:intergenic
TCAAGGCCATCATGAACTTT+AGG 0.263685 8_3:-57920742 None:intergenic
GACACTATTAGCAGGATTAT+TGG 0.267423 8_3:+57921282 Msa1297540:CDS
GTATTGGCCAAAATGCAATT+TGG 0.269419 8_3:+57920983 Msa1297540:CDS
AGATGATCAGAGAGTATTTC+TGG 0.270507 8_3:-57923233 None:intergenic
GATTATGTTGCAAATGCTTC+TGG 0.287896 8_3:+57921316 Msa1297540:CDS
AGGTCTTCCCCTGACCAATT+TGG 0.290568 8_3:-57921947 None:intergenic
ATAAAGAAGAATTATGATTA+TGG 0.291591 8_3:+57921782 Msa1297540:CDS
AATGCATGGATCACCCTTCT+TGG 0.296126 8_3:-57920898 None:intergenic
GAAACCAAGAGTTGATGTTT+TGG 0.300117 8_3:+57923679 Msa1297540:CDS
TCCAATATACAAAGGTTATA+AGG 0.319254 8_3:+57922172 Msa1297540:CDS
CTACTCCATGAGAAGGTAAA+TGG 0.323183 8_3:-57923706 None:intergenic
ATGTTATGCTACCTGAATTT+CGG 0.325615 8_3:-57922624 None:intergenic
GCTTAAAAGGATTCCTTGTT+TGG 0.330987 8_3:+57920840 Msa1297540:CDS
CTGTTTGAGAACCGAAATTC+AGG 0.333743 8_3:+57922613 Msa1297540:CDS
TGTTAACTGTTTCAAGTTAC+CGG 0.336402 8_3:+57921834 Msa1297540:CDS
GAAATGTTCTTCGCCAATTT+GGG 0.342154 8_3:+57922567 Msa1297540:CDS
GTTGGGAGCCAAGGCATTCT+AGG 0.347134 8_3:+57922504 Msa1297540:CDS
TGCTTCTTTGCTTGTGGAAA+CGG 0.348987 8_3:+57923556 Msa1297540:CDS
CTACCACTGTATACCCAAAT+TGG 0.350168 8_3:-57922580 None:intergenic
GTTGTTTGCTTGGATGTCAT+TGG 0.352489 8_3:-57923318 None:intergenic
TGTGGAAACGGTGGCAAAAC+TGG 0.354584 8_3:+57923568 Msa1297540:CDS
GAGCCACTCTTTAAAGGTAT+TGG 0.357520 8_3:+57920967 Msa1297540:CDS
AAAGGATTCCTTGTTTGGTT+TGG 0.357623 8_3:+57920845 Msa1297540:CDS
TCCACAGCTTTCAAACTTGA+AGG 0.368733 8_3:+57921977 Msa1297540:CDS
TATTGGCCAAAATGCAATTT+GGG 0.386822 8_3:+57920984 Msa1297540:CDS
TTAGTATTTCCAAATTGGTC+AGG 0.390261 8_3:+57921938 Msa1297540:CDS
TCTCAACCACGACTCTTCTT+AGG 0.410653 8_3:+57923293 Msa1297540:CDS
TCCTAGCCATAGCCATTTCA+AGG 0.412138 8_3:-57920759 None:intergenic
AAAGGGCTGAATAGAGGATT+GGG 0.415501 8_3:+57921259 Msa1297540:CDS
TTATGCAAGGGTCCTTAAAC+AGG 0.417088 8_3:-57923139 None:intergenic
TTCTCCAAAACATCAACTCT+TGG 0.424004 8_3:-57923683 None:intergenic
GTGGCGAAAACCTTGAGAAA+TGG 0.439639 8_3:+57920788 Msa1297540:CDS
AAAGAAGCAAAAGCAGCAAA+AGG 0.440203 8_3:-57923542 None:intergenic
GGCCTAGCCAAATCTATAGA+AGG 0.440228 8_3:+57921998 Msa1297540:CDS
TGAAACAGTTAACAAGTTGA+AGG 0.442800 8_3:-57921825 None:intergenic
TTAACAAGTTGAAGGTTAAG+AGG 0.444355 8_3:-57921817 None:intergenic
AGTTCATGATGGCCTTGAAA+TGG 0.452690 8_3:+57920747 Msa1297540:CDS
ATTGACGAAGTTGAAGAACT+TGG 0.456183 8_3:+57923599 Msa1297540:CDS
TGTTTAAGGACCCTTGCATA+AGG 0.456552 8_3:+57923141 Msa1297540:CDS
CTTTCCATGAGAGGCGGCTA+TGG 0.460245 8_3:-57923351 None:intergenic
AAAGGAAGAAGAACAATTAC+CGG 0.462474 8_3:+57923451 Msa1297540:CDS
CGCTTCTTCACCATAGCCAT+TGG 0.466959 8_3:+57921887 Msa1297540:CDS
GAGAACCATTTACCTTCTCA+TGG 0.469642 8_3:+57923701 Msa1297540:CDS
TGGCGAGCATGTTGTTTGCT+TGG 0.473062 8_3:-57923328 None:intergenic
ATTTAACAAAGCTGAAGAAT+CGG 0.475562 8_3:-57923396 None:intergenic
CAAAGGGCTGAATAGAGGAT+TGG 0.475828 8_3:+57921258 Msa1297540:CDS
TTATGCAAAGGGCTGAATAG+AGG 0.477408 8_3:+57921253 Msa1297540:CDS
GTGATCCATGCATTCAAAGT+TGG 0.477949 8_3:+57920907 Msa1297540:CDS
TCGCAACAGTATGTAAAAGT+TGG 0.479295 8_3:+57922545 Msa1297540:CDS
CGGTTCTCAAACAGCCATGT+AGG 0.484364 8_3:-57922604 None:intergenic
GCCACCATAGCCGCCTCTCA+TGG 0.486291 8_3:+57923347 Msa1297540:CDS
GTTGTGTATGGCAGGATCTA+CGG 0.486401 8_3:+57921733 Msa1297540:intron
GTAGGCATTGCATGCAAGTT+GGG 0.489768 8_3:+57922487 Msa1297540:intron
TGGAGTAGAGTGATTCTGAA+TGG 0.494182 8_3:+57923721 Msa1297540:exon
TGCATGCAAGTTGGGAGCCA+AGG 0.495437 8_3:+57922495 Msa1297540:CDS
GAGTGATTCTGAATGGGAGC+AGG 0.500396 8_3:+57923728 Msa1297540:exon
GTTTGGTTTGGAAGACTACA+TGG 0.504622 8_3:+57920857 Msa1297540:CDS
TACGTTTCTTCCATTTCTCA+AGG 0.504702 8_3:-57920798 None:intergenic
GCCTTCAAGTTTGAAAGCTG+TGG 0.506523 8_3:-57921978 None:intergenic
GCGCCGACTTCTTATGCTGT+TGG 0.511246 8_3:-57923201 None:intergenic
TCCATGAGAGGCGGCTATGG+TGG 0.516245 8_3:-57923348 None:intergenic
AGTTGAAGAACTTGGGAGGT+TGG 0.516985 8_3:+57923607 Msa1297540:CDS
AAGACTCATGAAAAGACAAA+TGG 0.520278 8_3:-57921915 None:intergenic
ATAAACCAACTTTGAATGCA+TGG 0.520687 8_3:-57920912 None:intergenic
GCTTACCAATGTTTCATCTG+TGG 0.526234 8_3:-57922213 None:intergenic
TAGTATTTCCAAATTGGTCA+GGG 0.528241 8_3:+57921939 Msa1297540:CDS
AATGGCACAGCCAATGGCTA+TGG 0.530289 8_3:-57921897 None:intergenic
GGAGTAGAGTGATTCTGAAT+GGG 0.536354 8_3:+57923722 Msa1297540:exon
TATCATCAGACTATTTACTC+TGG 0.536898 8_3:+57923836 Msa1297540:three_prime_UTR
GATCTACGGCCACTTATATG+AGG 0.539251 8_3:+57921747 Msa1297540:CDS
TTGACGAAGTTGAAGAACTT+GGG 0.540827 8_3:+57923600 Msa1297540:CDS
AAGACAAATGGCACAGCCAA+TGG 0.541186 8_3:-57921903 None:intergenic
TGACAGTACCTAGAATGCCT+TGG 0.545491 8_3:-57922512 None:intergenic
GGTTCTCAAACAGCCATGTA+GGG 0.547487 8_3:-57922603 None:intergenic
CAGGGGCAACTTTATGCAAA+GGG 0.551257 8_3:+57921242 Msa1297540:intron
TCTGCTGCTAGCCTTATGCA+AGG 0.556979 8_3:-57923152 None:intergenic
TATACAGTGGTAGCCCTACA+TGG 0.561138 8_3:+57922590 Msa1297540:CDS
GCCTTGAAATGGCTATGGCT+AGG 0.564062 8_3:+57920758 Msa1297540:CDS
GGATTGGGGACACTATTAGC+AGG 0.564656 8_3:+57921274 Msa1297540:CDS
TGTAGGCATTGCATGCAAGT+TGG 0.564912 8_3:+57922486 Msa1297540:intron
AGAACAATTACCGGTACGTA+AGG 0.566107 8_3:+57923460 Msa1297540:CDS
TGGCCAATACCTTTAAAGAG+TGG 0.568510 8_3:-57920970 None:intergenic
AGGAACGAACCTCATATAAG+TGG 0.569111 8_3:-57921756 None:intergenic
GGTTGATCATGTCTTGAAGA+TGG 0.569323 8_3:+57921856 Msa1297540:CDS
TGATGGCCTTGAAATGGCTA+TGG 0.571361 8_3:+57920753 Msa1297540:CDS
AACAGGACTCGAACAGATTG+TGG 0.571380 8_3:-57923122 None:intergenic
GCAGGGGCAACTTTATGCAA+AGG 0.574504 8_3:+57921241 Msa1297540:intron
GTTAACTGTTTCAAGTTACC+GGG 0.574845 8_3:+57921835 Msa1297540:CDS
AAAATCCACAGATGAAACAT+TGG 0.576415 8_3:+57922208 Msa1297540:CDS
TTTCTCAACACCTTACGTAC+CGG 0.581127 8_3:-57923470 None:intergenic
ATGATTCCTAAAGTTCATGA+TGG 0.582610 8_3:+57920736 Msa1297540:CDS
GAGTGAGCTCTTTCCATGAG+AGG 0.583770 8_3:-57923360 None:intergenic
TCGGATGTGATGATCCAAGA+AGG 0.583906 8_3:+57920884 Msa1297540:CDS
TTGCATAAGGCTAGCAGCAG+AGG 0.586458 8_3:+57923154 Msa1297540:CDS
TTCTTTGCTTGTGGAAACGG+TGG 0.592923 8_3:+57923559 Msa1297540:CDS
CTAATAGAAAACTCATCACC+AGG 0.594652 8_3:-57923650 None:intergenic
TACCTTCTATAGATTTGGCT+AGG 0.594807 8_3:-57922000 None:intergenic
AGAGTATTTCTGGTGAGCAA+TGG 0.601068 8_3:-57923223 None:intergenic
TGTATCAGCTGAACAGACAA+AGG 0.608885 8_3:+57923433 Msa1297540:CDS
GGTGATATAAAATCATCTGA+AGG 0.611420 8_3:+57922149 Msa1297540:CDS
CTGCTGCTAGCCTTATGCAA+GGG 0.615929 8_3:-57923151 None:intergenic
TGGAAGACTACATGGAAGGT+CGG 0.617088 8_3:+57920865 Msa1297540:CDS
GGTTTGGAAGACTACATGGA+AGG 0.620257 8_3:+57920861 Msa1297540:CDS
TGAAAGCTGTGGAATGATGA+AGG 0.622018 8_3:-57921967 None:intergenic
CGGATGTGATGATCCAAGAA+GGG 0.624692 8_3:+57920885 Msa1297540:CDS
GAAGAATTATGATTATGGTG+TGG 0.626346 8_3:+57921787 Msa1297540:CDS
GGCTGTCATGACTGTCGTCG+TGG 0.630752 8_3:+57921005 Msa1297540:CDS
GTAGTCTTCCAAACCAAACA+AGG 0.632776 8_3:-57920853 None:intergenic
ACGAAGTTGAAGAACTTGGG+AGG 0.635974 8_3:+57923603 Msa1297540:CDS
AGTGATTCTGAATGGGAGCA+GGG 0.636257 8_3:+57923729 Msa1297540:exon
AATCACTCTACTCCATGAGA+AGG 0.644576 8_3:-57923713 None:intergenic
TAGCCAACAGCATAAGAAGT+CGG 0.647738 8_3:+57923198 Msa1297540:CDS
AGTATTTCCAAATTGGTCAG+GGG 0.650407 8_3:+57921940 Msa1297540:CDS
TGTTTCAAAGAGTATACACC+TGG 0.658227 8_3:+57923632 Msa1297540:CDS
TTGGAGCCTAAGAAGAGTCG+TGG 0.661184 8_3:-57923299 None:intergenic
CAATGGCTATGGTGAAGAAG+CGG 0.662768 8_3:-57921886 None:intergenic
TCTGAAGGTCCAATATACAA+AGG 0.663082 8_3:+57922164 Msa1297540:CDS
TGAGCTCTTTCCATGAGAGG+CGG 0.667299 8_3:-57923357 None:intergenic
AAGGGCTGAATAGAGGATTG+GGG 0.679447 8_3:+57921260 Msa1297540:CDS
TCGCCAATTTGGGTATACAG+TGG 0.681644 8_3:+57922577 Msa1297540:CDS
GCTATGGCTAGGAATAAGAG+TGG 0.690552 8_3:+57920769 Msa1297540:CDS
TCTTCAAGACATGATCAACC+CGG 0.698255 8_3:-57921853 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATAAATAAATATTTATC+AGG - chr8_3:57922394-57922413 None:intergenic 10.0%
!!! TATATATTTGATAACCAAAA+TGG + chr8_3:57921387-57921406 Msa1297540:intron 15.0%
!! TCATAATTCTTCTTTATATA+AGG - chr8_3:57921779-57921798 None:intergenic 15.0%
!! ATAAAGAAGAATTATGATTA+TGG + chr8_3:57921782-57921801 Msa1297540:CDS 15.0%
!! ATAGTAGTTATATTTATAAG+TGG + chr8_3:57922773-57922792 Msa1297540:intron 15.0%
!! TAGTAGTTATATTTATAAGT+GGG + chr8_3:57922774-57922793 Msa1297540:intron 15.0%
!! GGATAATAAATTGAATTAAA+AGG - chr8_3:57923092-57923111 None:intergenic 15.0%
!! TGTATCATTGCTTTATATAT+TGG + chr8_3:57920945-57920964 Msa1297540:CDS 20.0%
!!! AATACTATTTGAGTTTAGAT+AGG - chr8_3:57921058-57921077 None:intergenic 20.0%
!!! TACTTTTTCATCTATGATAT+TGG + chr8_3:57921084-57921103 Msa1297540:intron 20.0%
!!! TTACTATATTGTTTCTATCA+TGG - chr8_3:57921174-57921193 None:intergenic 20.0%
!!! ATTTGTAATTTTTTTATGGC+AGG + chr8_3:57921223-57921242 Msa1297540:intron 20.0%
!!! TTTGTAATTTTTTTATGGCA+GGG + chr8_3:57921224-57921243 Msa1297540:intron 20.0%
!! TTTGAGCAATTTATAACAAA+GGG - chr8_3:57921442-57921461 None:intergenic 20.0%
!! ATTTGAGCAATTTATAACAA+AGG - chr8_3:57921443-57921462 None:intergenic 20.0%
!!! ATTTTGACAACAAATATTGT+CGG - chr8_3:57921581-57921600 None:intergenic 20.0%
!! AAACTTATCGAAATTATTTG+TGG + chr8_3:57921696-57921715 Msa1297540:intron 20.0%
!! TATATTAGCAACTTATTGTA+AGG + chr8_3:57922070-57922089 Msa1297540:intron 20.0%
!!! TGTGTCAATGAATATTTTTA+TGG + chr8_3:57922110-57922129 Msa1297540:CDS 20.0%
!! ATAATATCTTGATCTTCAAA+TGG + chr8_3:57922448-57922467 Msa1297540:intron 20.0%
!! TATTCCATCAATGAATATAA+AGG - chr8_3:57922734-57922753 None:intergenic 20.0%
!! ATTTGATACGTCTTAAAATT+TGG - chr8_3:57922849-57922868 None:intergenic 20.0%
!! TAGTTGTAGAAATATGAAAA+AGG + chr8_3:57922999-57923018 Msa1297540:intron 20.0%
! AAAATACAAATAAATGCGAC+CGG + chr8_3:57921111-57921130 Msa1297540:intron 25.0%
!!! TTGTAATTTTTTTATGGCAG+GGG + chr8_3:57921225-57921244 Msa1297540:intron 25.0%
!! TAACTTTAGTAGAACCATTT+TGG - chr8_3:57921404-57921423 None:intergenic 25.0%
!! ATAACAAAGGGAAATTTTCA+TGG - chr8_3:57921430-57921449 None:intergenic 25.0%
!! ATTTCGATAAGTTTTCGAAT+TGG - chr8_3:57921690-57921709 None:intergenic 25.0%
!! GTCTTTTAGTATTTCCAAAT+TGG + chr8_3:57921933-57921952 Msa1297540:CDS 25.0%
! CTATGTATGTGTTATGAATT+CGG - chr8_3:57922028-57922047 None:intergenic 25.0%
! TAACACATACATAGTATCAA+AGG + chr8_3:57922034-57922053 Msa1297540:intron 25.0%
! TATGGAAAAATTGAAGTTTC+TGG + chr8_3:57922128-57922147 Msa1297540:CDS 25.0%
! TCCAATATACAAAGGTTATA+AGG + chr8_3:57922172-57922191 Msa1297540:CDS 25.0%
! GATACCTTTATATTCATTGA+TGG + chr8_3:57922727-57922746 Msa1297540:intron 25.0%
! ACGTATCAAATTATGTTGTT+GGG + chr8_3:57922858-57922877 Msa1297540:intron 25.0%
! AATTTAGACTTATCTTTGAG+TGG - chr8_3:57922899-57922918 None:intergenic 25.0%
!!! TTAGAATTTGCTAAATCGTA+GGG - chr8_3:57922965-57922984 None:intergenic 25.0%
! ATTTAACAAAGCTGAAGAAT+CGG - chr8_3:57923399-57923418 None:intergenic 25.0%
!!! ATTCTTCAGCTTTGTTAAAT+TGG + chr8_3:57923399-57923418 Msa1297540:CDS 25.0%
ATGATTCCTAAAGTTCATGA+TGG + chr8_3:57920736-57920755 Msa1297540:CDS 30.0%
! AAGAAACGTATCCATGTTTT+TGG + chr8_3:57920811-57920830 Msa1297540:CDS 30.0%
ATAAACCAACTTTGAATGCA+TGG - chr8_3:57920915-57920934 None:intergenic 30.0%
TATTGGCCAAAATGCAATTT+GGG + chr8_3:57920984-57921003 Msa1297540:CDS 30.0%
TTTCGAATTGGTTACAATTG+AGG - chr8_3:57921678-57921697 None:intergenic 30.0%
!! TCCTGTTAATTTGTTGTGTA+TGG + chr8_3:57921721-57921740 Msa1297540:intron 30.0%
GAAGAATTATGATTATGGTG+TGG + chr8_3:57921787-57921806 Msa1297540:CDS 30.0%
! TTAACAAGTTGAAGGTTAAG+AGG - chr8_3:57921820-57921839 None:intergenic 30.0%
! TGAAACAGTTAACAAGTTGA+AGG - chr8_3:57921828-57921847 None:intergenic 30.0%
!! TGTTAACTGTTTCAAGTTAC+CGG + chr8_3:57921834-57921853 Msa1297540:CDS 30.0%
AAGACTCATGAAAAGACAAA+TGG - chr8_3:57921918-57921937 None:intergenic 30.0%
TTAGTATTTCCAAATTGGTC+AGG + chr8_3:57921938-57921957 Msa1297540:CDS 30.0%
TAGTATTTCCAAATTGGTCA+GGG + chr8_3:57921939-57921958 Msa1297540:CDS 30.0%
GGTGATATAAAATCATCTGA+AGG + chr8_3:57922149-57922168 Msa1297540:CDS 30.0%
GCCTTATAACCTTTGTATAT+TGG - chr8_3:57922176-57922195 None:intergenic 30.0%
AAAATCCACAGATGAAACAT+TGG + chr8_3:57922208-57922227 Msa1297540:CDS 30.0%
TGAATGGATCAAAACAAGAT+TGG - chr8_3:57922241-57922260 None:intergenic 30.0%
! ATACTTGGCATGATTTTGAA+TGG - chr8_3:57922257-57922276 None:intergenic 30.0%
AGTGTGAGCTATATTATACT+TGG - chr8_3:57922272-57922291 None:intergenic 30.0%
ATGTTATGCTACCTGAATTT+CGG - chr8_3:57922627-57922646 None:intergenic 30.0%
ACTATTTGAACTAGTCAAAG+TGG - chr8_3:57922758-57922777 None:intergenic 30.0%
AATTCCAAAAGCAAATTCAC+GGG - chr8_3:57922811-57922830 None:intergenic 30.0%
CAATTCCAAAAGCAAATTCA+CGG - chr8_3:57922812-57922831 None:intergenic 30.0%
GACGTATCAAATTATGTTGT+TGG + chr8_3:57922857-57922876 Msa1297540:intron 30.0%
!! CTTAGAATTTGCTAAATCGT+AGG - chr8_3:57922966-57922985 None:intergenic 30.0%
AAAGGAAGAAGAACAATTAC+CGG + chr8_3:57923451-57923470 Msa1297540:CDS 30.0%
TATCATCAGACTATTTACTC+TGG + chr8_3:57923836-57923855 Msa1297540:three_prime_UTR 30.0%
TACGTTTCTTCCATTTCTCA+AGG - chr8_3:57920801-57920820 None:intergenic 35.0%
!! TTTTTGGTGAGAGGCTTAAA+AGG + chr8_3:57920827-57920846 Msa1297540:CDS 35.0%
GCTTAAAAGGATTCCTTGTT+TGG + chr8_3:57920840-57920859 Msa1297540:CDS 35.0%
! AAAGGATTCCTTGTTTGGTT+TGG + chr8_3:57920845-57920864 Msa1297540:CDS 35.0%
ATATTGGAGCCACTCTTTAA+AGG + chr8_3:57920961-57920980 Msa1297540:CDS 35.0%
! GTATTGGCCAAAATGCAATT+TGG + chr8_3:57920983-57921002 Msa1297540:CDS 35.0%
GACACTATTAGCAGGATTAT+TGG + chr8_3:57921282-57921301 Msa1297540:CDS 35.0%
GATTATGTTGCAAATGCTTC+TGG + chr8_3:57921316-57921335 Msa1297540:CDS 35.0%
! GCAGTTGCAGTTTTTGTAAT+AGG + chr8_3:57921364-57921383 Msa1297540:CDS 35.0%
CTTTCTTTCAATCACATCGA+CGG - chr8_3:57921515-57921534 None:intergenic 35.0%
GCCATACACAACAAATTAAC+AGG - chr8_3:57921725-57921744 None:intergenic 35.0%
!! GTTAATTTGTTGTGTATGGC+AGG + chr8_3:57921725-57921744 Msa1297540:intron 35.0%
!! GTTAACTGTTTCAAGTTACC+GGG + chr8_3:57921835-57921854 Msa1297540:CDS 35.0%
AGTATTTCCAAATTGGTCAG+GGG + chr8_3:57921940-57921959 Msa1297540:CDS 35.0%
TACCTTCTATAGATTTGGCT+AGG - chr8_3:57922003-57922022 None:intergenic 35.0%
TCTGAAGGTCCAATATACAA+AGG + chr8_3:57922164-57922183 Msa1297540:CDS 35.0%
! CAAAGGTTATAAGGCTGTTT+TGG + chr8_3:57922181-57922200 Msa1297540:CDS 35.0%
GACTTAGTACGCATAATTTG+TGG - chr8_3:57922338-57922357 None:intergenic 35.0%
! GGTTGTGTTTTCAATTGTGT+AGG + chr8_3:57922469-57922488 Msa1297540:intron 35.0%
! ACTTTTACATACTGTTGCGA+TGG - chr8_3:57922545-57922564 None:intergenic 35.0%
TCGCAACAGTATGTAAAAGT+TGG + chr8_3:57922545-57922564 Msa1297540:CDS 35.0%
GAAATGTTCTTCGCCAATTT+GGG + chr8_3:57922567-57922586 Msa1297540:CDS 35.0%
CACAGACAGATTCACAAAAA+TGG - chr8_3:57922672-57922691 None:intergenic 35.0%
ATTCCAAAAGCAAATTCACG+GGG - chr8_3:57922810-57922829 None:intergenic 35.0%
AAGAGAATTCTTCTCTACTG+TGG + chr8_3:57923045-57923064 Msa1297540:intron 35.0%
!! AGATGATCAGAGAGTATTTC+TGG - chr8_3:57923236-57923255 None:intergenic 35.0%
AAAGAAGCAAAAGCAGCAAA+AGG - chr8_3:57923545-57923564 None:intergenic 35.0%
ATTGACGAAGTTGAAGAACT+TGG + chr8_3:57923599-57923618 Msa1297540:CDS 35.0%
TTGACGAAGTTGAAGAACTT+GGG + chr8_3:57923600-57923619 Msa1297540:CDS 35.0%
! TGTTTCAAAGAGTATACACC+TGG + chr8_3:57923632-57923651 Msa1297540:CDS 35.0%
CTAATAGAAAACTCATCACC+AGG - chr8_3:57923653-57923672 None:intergenic 35.0%
!!! GAAACCAAGAGTTGATGTTT+TGG + chr8_3:57923679-57923698 Msa1297540:CDS 35.0%
TTCTCCAAAACATCAACTCT+TGG - chr8_3:57923686-57923705 None:intergenic 35.0%
TCAAGGCCATCATGAACTTT+AGG - chr8_3:57920745-57920764 None:intergenic 40.0%
! AGTTCATGATGGCCTTGAAA+TGG + chr8_3:57920747-57920766 Msa1297540:CDS 40.0%
!!! GTATCCATGTTTTTGGTGAG+AGG + chr8_3:57920818-57920837 Msa1297540:CDS 40.0%
TAAGCCTCTCACCAAAAACA+TGG - chr8_3:57920825-57920844 None:intergenic 40.0%
GTAGTCTTCCAAACCAAACA+AGG - chr8_3:57920856-57920875 None:intergenic 40.0%
!! GTTTGGTTTGGAAGACTACA+TGG + chr8_3:57920857-57920876 Msa1297540:CDS 40.0%
GTGATCCATGCATTCAAAGT+TGG + chr8_3:57920907-57920926 Msa1297540:CDS 40.0%
! GAGCCACTCTTTAAAGGTAT+TGG + chr8_3:57920967-57920986 Msa1297540:CDS 40.0%
! TGGCCAATACCTTTAAAGAG+TGG - chr8_3:57920973-57920992 None:intergenic 40.0%
! TGACAGCCCAAATTGCATTT+TGG - chr8_3:57920993-57921012 None:intergenic 40.0%
ACAAATAAATGCGACCGGTA+CGG + chr8_3:57921116-57921135 Msa1297540:intron 40.0%
TTATGCAAAGGGCTGAATAG+AGG + chr8_3:57921253-57921272 Msa1297540:CDS 40.0%
AAAGGGCTGAATAGAGGATT+GGG + chr8_3:57921259-57921278 Msa1297540:CDS 40.0%
GCTACAAGATAGTGCAAAGA+AGG - chr8_3:57921644-57921663 None:intergenic 40.0%
AGGAACGAACCTCATATAAG+TGG - chr8_3:57921759-57921778 None:intergenic 40.0%
TCTTCAAGACATGATCAACC+CGG - chr8_3:57921856-57921875 None:intergenic 40.0%
GGTTGATCATGTCTTGAAGA+TGG + chr8_3:57921856-57921875 Msa1297540:CDS 40.0%
TGAAAGCTGTGGAATGATGA+AGG - chr8_3:57921970-57921989 None:intergenic 40.0%
TCCACAGCTTTCAAACTTGA+AGG + chr8_3:57921977-57921996 Msa1297540:CDS 40.0%
CGGCATACCTTCTATAGATT+TGG - chr8_3:57922008-57922027 None:intergenic 40.0%
GCTTACCAATGTTTCATCTG+TGG - chr8_3:57922216-57922235 None:intergenic 40.0%
ATATAGCTCACACTAAGAGC+TGG + chr8_3:57922278-57922297 Msa1297540:intron 40.0%
GGAAATGTTCTTCGCCAATT+TGG + chr8_3:57922566-57922585 Msa1297540:CDS 40.0%
CTACCACTGTATACCCAAAT+TGG - chr8_3:57922583-57922602 None:intergenic 40.0%
CTGTTTGAGAACCGAAATTC+AGG + chr8_3:57922613-57922632 Msa1297540:CDS 40.0%
AAATAACTCCCGCGTAAAGT+GGG + chr8_3:57922928-57922947 Msa1297540:intron 40.0%
TTTGCTAAATCGTAGGGTGA+AGG - chr8_3:57922959-57922978 None:intergenic 40.0%
ACAGATTGTGGTGTCTGAAA+AGG - chr8_3:57923113-57923132 None:intergenic 40.0%
ATCTGTTCGAGTCCTGTTTA+AGG + chr8_3:57923127-57923146 Msa1297540:CDS 40.0%
TTATGCAAGGGTCCTTAAAC+AGG - chr8_3:57923142-57923161 None:intergenic 40.0%
TGTTTAAGGACCCTTGCATA+AGG + chr8_3:57923141-57923160 Msa1297540:CDS 40.0%
TAGCCAACAGCATAAGAAGT+CGG + chr8_3:57923198-57923217 Msa1297540:CDS 40.0%
!! AGAGTATTTCTGGTGAGCAA+TGG - chr8_3:57923226-57923245 None:intergenic 40.0%
! GAGTCGTGGTTGAGATTTTA+TGG - chr8_3:57923288-57923307 None:intergenic 40.0%
GTTGTTTGCTTGGATGTCAT+TGG - chr8_3:57923321-57923340 None:intergenic 40.0%
! CTGTTCAGCTGATACACTTT+TGG - chr8_3:57923429-57923448 None:intergenic 40.0%
TGTATCAGCTGAACAGACAA+AGG + chr8_3:57923433-57923452 Msa1297540:CDS 40.0%
AGAACAATTACCGGTACGTA+AGG + chr8_3:57923460-57923479 Msa1297540:CDS 40.0%
TTTCTCAACACCTTACGTAC+CGG - chr8_3:57923473-57923492 None:intergenic 40.0%
! TGCTTTTGCTTCTTTGCTTG+TGG + chr8_3:57923550-57923569 Msa1297540:CDS 40.0%
TGCTTCTTTGCTTGTGGAAA+CGG + chr8_3:57923556-57923575 Msa1297540:CDS 40.0%
GAGAACCATTTACCTTCTCA+TGG + chr8_3:57923701-57923720 Msa1297540:CDS 40.0%
CTACTCCATGAGAAGGTAAA+TGG - chr8_3:57923709-57923728 None:intergenic 40.0%
AATCACTCTACTCCATGAGA+AGG - chr8_3:57923716-57923735 None:intergenic 40.0%
TGGAGTAGAGTGATTCTGAA+TGG + chr8_3:57923721-57923740 Msa1297540:exon 40.0%
GGAGTAGAGTGATTCTGAAT+GGG + chr8_3:57923722-57923741 Msa1297540:exon 40.0%
! TGATGGCCTTGAAATGGCTA+TGG + chr8_3:57920753-57920772 Msa1297540:CDS 45.0%
TCCTAGCCATAGCCATTTCA+AGG - chr8_3:57920762-57920781 None:intergenic 45.0%
GCTATGGCTAGGAATAAGAG+TGG + chr8_3:57920769-57920788 Msa1297540:CDS 45.0%
GTGGCGAAAACCTTGAGAAA+TGG + chr8_3:57920788-57920807 Msa1297540:CDS 45.0%
GGTTTGGAAGACTACATGGA+AGG + chr8_3:57920861-57920880 Msa1297540:CDS 45.0%
TGGAAGACTACATGGAAGGT+CGG + chr8_3:57920865-57920884 Msa1297540:CDS 45.0%
TCGGATGTGATGATCCAAGA+AGG + chr8_3:57920884-57920903 Msa1297540:CDS 45.0%
CGGATGTGATGATCCAAGAA+GGG + chr8_3:57920885-57920904 Msa1297540:CDS 45.0%
AATGCATGGATCACCCTTCT+TGG - chr8_3:57920901-57920920 None:intergenic 45.0%
CAGGGGCAACTTTATGCAAA+GGG + chr8_3:57921242-57921261 Msa1297540:intron 45.0%
CAAAGGGCTGAATAGAGGAT+TGG + chr8_3:57921258-57921277 Msa1297540:CDS 45.0%
AAGGGCTGAATAGAGGATTG+GGG + chr8_3:57921260-57921279 Msa1297540:CDS 45.0%
GCACTATCTTGTAGCTAGTC+TGG + chr8_3:57921649-57921668 Msa1297540:intron 45.0%
! CTATCTTGTAGCTAGTCTGG+AGG + chr8_3:57921652-57921671 Msa1297540:intron 45.0%
GTTGTGTATGGCAGGATCTA+CGG + chr8_3:57921733-57921752 Msa1297540:intron 45.0%
GATCTACGGCCACTTATATG+AGG + chr8_3:57921747-57921766 Msa1297540:CDS 45.0%
CAATGGCTATGGTGAAGAAG+CGG - chr8_3:57921889-57921908 None:intergenic 45.0%
AAGACAAATGGCACAGCCAA+TGG - chr8_3:57921906-57921925 None:intergenic 45.0%
! GCCTTCAAGTTTGAAAGCTG+TGG - chr8_3:57921981-57922000 None:intergenic 45.0%
GGCCTAGCCAAATCTATAGA+AGG + chr8_3:57921998-57922017 Msa1297540:CDS 45.0%
! TGTAGGCATTGCATGCAAGT+TGG + chr8_3:57922486-57922505 Msa1297540:intron 45.0%
! GTAGGCATTGCATGCAAGTT+GGG + chr8_3:57922487-57922506 Msa1297540:intron 45.0%
TGACAGTACCTAGAATGCCT+TGG - chr8_3:57922515-57922534 None:intergenic 45.0%
TCGCCAATTTGGGTATACAG+TGG + chr8_3:57922577-57922596 Msa1297540:CDS 45.0%
TATACAGTGGTAGCCCTACA+TGG + chr8_3:57922590-57922609 Msa1297540:CDS 45.0%
GGTTCTCAAACAGCCATGTA+GGG - chr8_3:57922606-57922625 None:intergenic 45.0%
CACTTTACGCGGGAGTTATT+TGG - chr8_3:57922929-57922948 None:intergenic 45.0%
CAAATAACTCCCGCGTAAAG+TGG + chr8_3:57922927-57922946 Msa1297540:intron 45.0%
AATAACTCCCGCGTAAAGTG+GGG + chr8_3:57922929-57922948 Msa1297540:intron 45.0%
AACAGGACTCGAACAGATTG+TGG - chr8_3:57923125-57923144 None:intergenic 45.0%
! GAGATTTTATGGCTGCGTTG+AGG - chr8_3:57923277-57923296 None:intergenic 45.0%
TCTCAACCACGACTCTTCTT+AGG + chr8_3:57923293-57923312 Msa1297540:CDS 45.0%
TTCTTTGCTTGTGGAAACGG+TGG + chr8_3:57923559-57923578 Msa1297540:CDS 45.0%
ACGAAGTTGAAGAACTTGGG+AGG + chr8_3:57923603-57923622 Msa1297540:CDS 45.0%
AGTTGAAGAACTTGGGAGGT+TGG + chr8_3:57923607-57923626 Msa1297540:CDS 45.0%
AGTGATTCTGAATGGGAGCA+GGG + chr8_3:57923729-57923748 Msa1297540:exon 45.0%
!!! TTTAATTTGTAATTTTTTTA+TGG + chr8_3:57921219-57921238 Msa1297540:intron 5.0%
GCCTTGAAATGGCTATGGCT+AGG + chr8_3:57920758-57920777 Msa1297540:CDS 50.0%
!!! GTGGTTTTCGAGTTCACTGC+AGG + chr8_3:57921024-57921043 Msa1297540:CDS 50.0%
ATCCACAATTGCTGCCGTAC+CGG - chr8_3:57921133-57921152 None:intergenic 50.0%
GCAGGGGCAACTTTATGCAA+AGG + chr8_3:57921241-57921260 Msa1297540:intron 50.0%
GGATTGGGGACACTATTAGC+AGG + chr8_3:57921274-57921293 Msa1297540:CDS 50.0%
CGCTTCTTCACCATAGCCAT+TGG + chr8_3:57921887-57921906 Msa1297540:CDS 50.0%
AATGGCACAGCCAATGGCTA+TGG - chr8_3:57921900-57921919 None:intergenic 50.0%
AGGTCTTCCCCTGACCAATT+TGG - chr8_3:57921950-57921969 None:intergenic 50.0%
CGGTTCTCAAACAGCCATGT+AGG - chr8_3:57922607-57922626 None:intergenic 50.0%
CCAAAAGCAAATTCACGGGG+TGG - chr8_3:57922807-57922826 None:intergenic 50.0%
!! CCACCCCGTGAATTTGCTTT+TGG + chr8_3:57922804-57922823 Msa1297540:intron 50.0%
TCTTTGAGTGGCTCGATGAC+AGG - chr8_3:57922887-57922906 None:intergenic 50.0%
ATAACTCCCGCGTAAAGTGG+GGG + chr8_3:57922930-57922949 Msa1297540:intron 50.0%
!! CTGCTGCTAGCCTTATGCAA+GGG - chr8_3:57923154-57923173 None:intergenic 50.0%
!! TCTGCTGCTAGCCTTATGCA+AGG - chr8_3:57923155-57923174 None:intergenic 50.0%
TTGCATAAGGCTAGCAGCAG+AGG + chr8_3:57923154-57923173 Msa1297540:CDS 50.0%
TTGGAGCCTAAGAAGAGTCG+TGG - chr8_3:57923302-57923321 None:intergenic 50.0%
! TGGCGAGCATGTTGTTTGCT+TGG - chr8_3:57923331-57923350 None:intergenic 50.0%
TGAGCTCTTTCCATGAGAGG+CGG - chr8_3:57923360-57923379 None:intergenic 50.0%
GAGTGAGCTCTTTCCATGAG+AGG - chr8_3:57923363-57923382 None:intergenic 50.0%
TGTGGAAACGGTGGCAAAAC+TGG + chr8_3:57923568-57923587 Msa1297540:CDS 50.0%
GAGTGATTCTGAATGGGAGC+AGG + chr8_3:57923728-57923747 Msa1297540:exon 50.0%
! TGCATGCAAGTTGGGAGCCA+AGG + chr8_3:57922495-57922514 Msa1297540:CDS 55.0%
! GTTGGGAGCCAAGGCATTCT+AGG + chr8_3:57922504-57922523 Msa1297540:CDS 55.0%
AAGGTTGCCCCCACTTTACG+CGG - chr8_3:57922940-57922959 None:intergenic 55.0%
!! GCGCCGACTTCTTATGCTGT+TGG - chr8_3:57923204-57923223 None:intergenic 55.0%
CTTTCCATGAGAGGCGGCTA+TGG - chr8_3:57923354-57923373 None:intergenic 55.0%
GGCTGTCATGACTGTCGTCG+TGG + chr8_3:57921005-57921024 Msa1297540:CDS 60.0%
GACCGGTACGGCAGCAATTG+TGG + chr8_3:57921128-57921147 Msa1297540:intron 60.0%
AGGTTGCCCCCACTTTACGC+GGG - chr8_3:57922939-57922958 None:intergenic 60.0%
TCCATGAGAGGCGGCTATGG+TGG - chr8_3:57923351-57923370 None:intergenic 60.0%
GCCACCATAGCCGCCTCTCA+TGG + chr8_3:57923347-57923366 Msa1297540:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 57920736 57923867 57920736 ID=Msa1297540;Name=Msa1297540
chr8_3 mRNA 57920736 57923867 57920736 ID=Msa1297540-mRNA-1;Parent=Msa1297540;Name=Msa1297540-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.66|1|1|1|6|134|534
chr8_3 exon 57920736 57921045 57920736 ID=Msa1297540-mRNA-1:exon:16578;Parent=Msa1297540-mRNA-1
chr8_3 exon 57921245 57921385 57921245 ID=Msa1297540-mRNA-1:exon:16579;Parent=Msa1297540-mRNA-1
chr8_3 exon 57921747 57922019 57921747 ID=Msa1297540-mRNA-1:exon:16580;Parent=Msa1297540-mRNA-1
chr8_3 exon 57922108 57922229 57922108 ID=Msa1297540-mRNA-1:exon:16581;Parent=Msa1297540-mRNA-1
chr8_3 exon 57922491 57922634 57922491 ID=Msa1297540-mRNA-1:exon:16582;Parent=Msa1297540-mRNA-1
chr8_3 exon 57923119 57923867 57923119 ID=Msa1297540-mRNA-1:exon:16583;Parent=Msa1297540-mRNA-1
chr8_3 CDS 57920736 57921045 57920736 ID=Msa1297540-mRNA-1:cds;Parent=Msa1297540-mRNA-1
chr8_3 CDS 57921245 57921385 57921245 ID=Msa1297540-mRNA-1:cds;Parent=Msa1297540-mRNA-1
chr8_3 CDS 57921747 57922019 57921747 ID=Msa1297540-mRNA-1:cds;Parent=Msa1297540-mRNA-1
chr8_3 CDS 57922108 57922229 57922108 ID=Msa1297540-mRNA-1:cds;Parent=Msa1297540-mRNA-1
chr8_3 CDS 57922491 57922634 57922491 ID=Msa1297540-mRNA-1:cds;Parent=Msa1297540-mRNA-1
chr8_3 CDS 57923119 57923733 57923119 ID=Msa1297540-mRNA-1:cds;Parent=Msa1297540-mRNA-1
chr8_3 three_prime_UTR 57923734 57923867 57923734 ID=Msa1297540-mRNA-1:three_prime_utr;Parent=Msa1297540-mRNA-1
Gene Sequence

>Msa1297540

ATGATTCCTAAAGTTCATGATGGCCTTGAAATGGCTATGGCTAGGAATAAGAGTGGCGAAAACCTTGAGAAATGGAAGAAACGTATCCATGTTTTTGGTGAGAGGCTTAAAAGGATTCCTTGTTTGGTTTGGAAGACTACATGGAAGGTCGGATGTGATGATCCAAGAAGGGTGATCCATGCATTCAAAGTTGGTTTATCTCTTACTCTTGTATCATTGCTTTATATATTGGAGCCACTCTTTAAAGGTATTGGCCAAAATGCAATTTGGGCTGTCATGACTGTCGTCGTGGTTTTCGAGTTCACTGCAGGGGCAACTTTATGCAAAGGGCTGAATAGAGGATTGGGGACACTATTAGCAGGATTATTGGCATTTCTTCTTGATTATGTTGCAAATGCTTCTGGTCAGATACTTCAAGCTGTTTTCATTGCAGTTGCAGTTTTTGTAATAGGATCTACGGCCACTTATATGAGGTTCGTTCCTTATATAAAGAAGAATTATGATTATGGTGTGGTTATATTCCTCTTAACCTTCAACTTGTTAACTGTTTCAAGTTACCGGGTTGATCATGTCTTGAAGATGGCACATGACCGCTTCTTCACCATAGCCATTGGCTGTGCCATTTGTCTTTTCATGAGTCTTTTAGTATTTCCAAATTGGTCAGGGGAAGACCTTCATCATTCCACAGCTTTCAAACTTGAAGGCCTAGCCAAATCTATAGAAGCTTGTGTCAATGAATATTTTTATGGAAAAATTGAAGTTTCTGGTGATATAAAATCATCTGAAGGTCCAATATACAAAGGTTATAAGGCTGTTTTGGATTCAAAATCCACAGATGAAACATTGGCATTGCATGCAAGTTGGGAGCCAAGGCATTCTAGGTACTGTCACAAATTTCCATCGCAACAGTATGTAAAAGTTGGAAATGTTCTTCGCCAATTTGGGTATACAGTGGTAGCCCTACATGGCTGTTTGAGAACCGAAATTCAGACACCACAATCTGTTCGAGTCCTGTTTAAGGACCCTTGCATAAGGCTAGCAGCAGAGGTATCAAAAGCACTAATAGAACTAGCCAACAGCATAAGAAGTCGGCGCCATTGCTCACCAGAAATACTCTCTGATCATCTACATGATGCATTGAAAGACCTCAACGCAGCCATAAAATCTCAACCACGACTCTTCTTAGGCTCCAATGACATCCAAGCAAACAACATGCTCGCCACCATAGCCGCCTCTCATGGAAAGAGCTCACTCTCAAGCGTTAAAACCGATTCTTCAGCTTTGTTAAATTGGAAAACCAAAAGTGTATCAGCTGAACAGACAAAGGAAGAAGAACAATTACCGGTACGTAAGGTGTTGAGAAAGCAGATGAGTAAAATTGCTATCACTAGTCTTGAGTTTTCTGAAGCATTGCCTTTTGCTGCTTTTGCTTCTTTGCTTGTGGAAACGGTGGCAAAACTGGATTTGATAATTGACGAAGTTGAAGAACTTGGGAGGTTGGCGTGTTTCAAAGAGTATACACCTGGTGATGAGTTTTCTATTAGTTCTGAGAAACCAAGAGTTGATGTTTTGGAGAACCATTTACCTTCTCATGGAGTAGAGTGA

Protein sequence

>Msa1297540

MIPKVHDGLEMAMARNKSGENLEKWKKRIHVFGERLKRIPCLVWKTTWKVGCDDPRRVIHAFKVGLSLTLVSLLYILEPLFKGIGQNAIWAVMTVVVVFEFTAGATLCKGLNRGLGTLLAGLLAFLLDYVANASGQILQAVFIAVAVFVIGSTATYMRFVPYIKKNYDYGVVIFLLTFNLLTVSSYRVDHVLKMAHDRFFTIAIGCAICLFMSLLVFPNWSGEDLHHSTAFKLEGLAKSIEACVNEYFYGKIEVSGDIKSSEGPIYKGYKAVLDSKSTDETLALHASWEPRHSRYCHKFPSQQYVKVGNVLRQFGYTVVALHGCLRTEIQTPQSVRVLFKDPCIRLAAEVSKALIELANSIRSRRHCSPEILSDHLHDALKDLNAAIKSQPRLFLGSNDIQANNMLATIAASHGKSSLSSVKTDSSALLNWKTKSVSAEQTKEEEQLPVRKVLRKQMSKIAITSLEFSEALPFAAFASLLVETVAKLDLIIDEVEELGRLACFKEYTPGDEFSISSEKPRVDVLENHLPSHGVE*