Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348410 | XP_024635150.1 | 98.907 | 366 | 4 | 0 | 1 | 366 | 1 | 366 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348410 | sp|Q9M2V1|NCA1_ARATH | 66.667 | 366 | 106 | 2 | 5 | 354 | 31 | 396 | 8.73e-175 | 494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348410 | A0A072UTH6 | 98.907 | 366 | 4 | 0 | 1 | 366 | 1 | 366 | 0.0 | 740 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005690 | Msa0348410 | 0.846136 | 2.625502e-59 | -8.615850e-47 |
| Msa0022230 | Msa0348410 | 0.804312 | 2.294911e-49 | -8.615850e-47 |
| Msa0025690 | Msa0348410 | 0.805195 | 1.501075e-49 | -8.615850e-47 |
| Msa0037040 | Msa0348410 | 0.810220 | 1.284506e-50 | -8.615850e-47 |
| Msa0053360 | Msa0348410 | 0.809746 | 1.624405e-50 | -8.615850e-47 |
| Msa0054760 | Msa0348410 | 0.800552 | 1.365886e-48 | -8.615850e-47 |
| Msa0072830 | Msa0348410 | 0.814429 | 1.547791e-51 | -8.615850e-47 |
| Msa0072860 | Msa0348410 | 0.807928 | 3.977888e-50 | -8.615850e-47 |
| Msa0074220 | Msa0348410 | 0.800037 | 1.738861e-48 | -8.615850e-47 |
| Msa0088670 | Msa0348410 | 0.822492 | 2.301174e-53 | -8.615850e-47 |
| Msa0094990 | Msa0348410 | 0.811956 | 5.401639e-51 | -8.615850e-47 |
| Msa0096510 | Msa0348410 | 0.847788 | 9.267061e-60 | -8.615850e-47 |
| Msa0098800 | Msa0348410 | 0.806215 | 9.165465e-50 | -8.615850e-47 |
| Msa0139920 | Msa0348410 | 0.878019 | 3.938713e-69 | -8.615850e-47 |
| Msa0147800 | Msa0348410 | 0.824916 | 6.226896e-54 | -8.615850e-47 |
| Msa0151210 | Msa0348410 | 0.820590 | 6.330511e-53 | -8.615850e-47 |
| Msa0160080 | Msa0348410 | 0.801861 | 7.373455e-49 | -8.615850e-47 |
| Msa0172290 | Msa0348410 | 0.802000 | 6.904870e-49 | -8.615850e-47 |
| Msa0178440 | Msa0348410 | 0.800672 | 1.291268e-48 | -8.615850e-47 |
| Msa0195670 | Msa0348410 | 0.832991 | 6.890616e-56 | -8.615850e-47 |
| Msa0208040 | Msa0348410 | 0.815525 | 8.839895e-52 | -8.615850e-47 |
| Msa0213020 | Msa0348410 | 0.810240 | 1.271718e-50 | -8.615850e-47 |
| Msa0222720 | Msa0348410 | 0.800808 | 1.211504e-48 | -8.615850e-47 |
| Msa0237440 | Msa0348410 | 0.829295 | 5.575601e-55 | -8.615850e-47 |
| Msa0239610 | Msa0348410 | 0.808016 | 3.809589e-50 | -8.615850e-47 |
| Msa0239980 | Msa0348410 | 0.811058 | 8.466337e-51 | -8.615850e-47 |
| Msa0264020 | Msa0348410 | 0.800271 | 1.558240e-48 | -8.615850e-47 |
| Msa0297320 | Msa0348410 | 0.814709 | 1.342102e-51 | -8.615850e-47 |
| Msa0315010 | Msa0348410 | 0.819107 | 1.381645e-52 | -8.615850e-47 |
| Msa0321230 | Msa0348410 | 0.810169 | 1.317543e-50 | -8.615850e-47 |
| Msa0330770 | Msa0348410 | 0.819192 | 1.321402e-52 | -8.615850e-47 |
| Msa0348410 | Msa0358720 | 0.810748 | 9.879980e-51 | -8.615850e-47 |
| Msa0348410 | Msa0367590 | 0.800516 | 1.389277e-48 | -8.615850e-47 |
| Msa0348410 | Msa0372250 | 0.816898 | 4.360638e-52 | -8.615850e-47 |
| Msa0348410 | Msa0413040 | 0.800770 | 1.233288e-48 | -8.615850e-47 |
| Msa0348410 | Msa0413050 | 0.803892 | 2.806254e-49 | -8.615850e-47 |
| Msa0348410 | Msa0434820 | 0.808817 | 2.570419e-50 | -8.615850e-47 |
| Msa0348410 | Msa0478730 | 0.807802 | 4.230313e-50 | -8.615850e-47 |
| Msa0348410 | Msa0497060 | 0.800623 | 1.321109e-48 | -8.615850e-47 |
| Msa0348410 | Msa0510410 | 0.815508 | 8.920838e-52 | -8.615850e-47 |
| Msa0348410 | Msa0522810 | 0.806979 | 6.324363e-50 | -8.615850e-47 |
| Msa0348410 | Msa0525800 | 0.815477 | 9.061834e-52 | -8.615850e-47 |
| Msa0348410 | Msa0530250 | 0.817057 | 4.017214e-52 | -8.615850e-47 |
| Msa0348410 | Msa0539400 | 0.803666 | 3.126666e-49 | -8.615850e-47 |
| Msa0348410 | Msa0539940 | 0.833512 | 5.109900e-56 | -8.615850e-47 |
| Msa0348410 | Msa0539990 | 0.832160 | 1.107770e-55 | -8.615850e-47 |
| Msa0348410 | Msa0565150 | 0.816342 | 5.809782e-52 | -8.615850e-47 |
| Msa0348410 | Msa0565530 | 0.823800 | 1.139894e-53 | -8.615850e-47 |
| Msa0348410 | Msa0567620 | 0.819972 | 8.771172e-53 | -8.615850e-47 |
| Msa0348410 | Msa0569540 | 0.802706 | 4.939593e-49 | -8.615850e-47 |
| Msa0348410 | Msa0569930 | 0.814362 | 1.601113e-51 | -8.615850e-47 |
| Msa0348410 | Msa0570250 | 0.811504 | 6.774582e-51 | -8.615850e-47 |
| Msa0348410 | Msa0572820 | 0.839457 | 1.566495e-57 | -8.615850e-47 |
| Msa0348410 | Msa0573970 | 0.828442 | 8.971031e-55 | -8.615850e-47 |
| Msa0348410 | Msa0587070 | 0.802123 | 6.512652e-49 | -8.615850e-47 |
| Msa0348410 | Msa0612880 | 0.839664 | 1.383763e-57 | -8.615850e-47 |
| Msa0348410 | Msa0635350 | 0.809642 | 1.710338e-50 | -8.615850e-47 |
| Msa0348410 | Msa0642150 | 0.809026 | 2.319384e-50 | -8.615850e-47 |
| Msa0348410 | Msa0668000 | 0.826655 | 2.408525e-54 | -8.615850e-47 |
| Msa0348410 | Msa0668160 | 0.802084 | 6.635283e-49 | -8.615850e-47 |
| Msa0348410 | Msa0672350 | 0.808632 | 2.815298e-50 | -8.615850e-47 |
| Msa0348410 | Msa0705710 | 0.849084 | 4.056383e-60 | -8.615850e-47 |
| Msa0348410 | Msa0706130 | 0.824213 | 9.119228e-54 | -8.615850e-47 |
| Msa0348410 | Msa0712670 | 0.810498 | 1.118750e-50 | -8.615850e-47 |
| Msa0348410 | Msa0717540 | 0.821646 | 3.615068e-53 | -8.615850e-47 |
| Msa0348410 | Msa0720130 | 0.861096 | 1.304356e-63 | -8.615850e-47 |
| Msa0348410 | Msa0726640 | 0.804226 | 2.390970e-49 | -8.615850e-47 |
| Msa0348410 | Msa0729120 | 0.814712 | 1.339518e-51 | -8.615850e-47 |
| Msa0348410 | Msa0733460 | 0.800655 | 1.301620e-48 | -8.615850e-47 |
| Msa0348410 | Msa0734760 | 0.807937 | 3.959961e-50 | -8.615850e-47 |
| Msa0348410 | Msa0744690 | 0.818843 | 1.585962e-52 | -8.615850e-47 |
| Msa0348410 | Msa0756440 | 0.804282 | 2.328419e-49 | -8.615850e-47 |
| Msa0348410 | Msa0756670 | 0.820477 | 6.719118e-53 | -8.615850e-47 |
| Msa0348410 | Msa0757650 | 0.832436 | 9.466119e-56 | -8.615850e-47 |
| Msa0348410 | Msa0772400 | 0.802880 | 4.547840e-49 | -8.615850e-47 |
| Msa0348410 | Msa0781030 | 0.823822 | 1.125909e-53 | -8.615850e-47 |
| Msa0348410 | Msa0791430 | 0.816777 | 4.643284e-52 | -8.615850e-47 |
| Msa0348410 | Msa0797980 | 0.828461 | 8.877321e-55 | -8.615850e-47 |
| Msa0348410 | Msa0805030 | 0.801687 | 8.004754e-49 | -8.615850e-47 |
| Msa0348410 | Msa0835550 | 0.808052 | 3.742110e-50 | -8.615850e-47 |
| Msa0348410 | Msa0836060 | 0.831418 | 1.688369e-55 | -8.615850e-47 |
| Msa0348410 | Msa0840450 | 0.805066 | 1.596935e-49 | -8.615850e-47 |
| Msa0348410 | Msa0840630 | 0.813116 | 3.012665e-51 | -8.615850e-47 |
| Msa0348410 | Msa0846070 | 0.820487 | 6.683439e-53 | -8.615850e-47 |
| Msa0348410 | Msa0848780 | 0.819041 | 1.430284e-52 | -8.615850e-47 |
| Msa0348410 | Msa0861400 | 0.823079 | 1.680276e-53 | -8.615850e-47 |
| Msa0348410 | Msa0866310 | 0.813782 | 2.150471e-51 | -8.615850e-47 |
| Msa0348410 | Msa0883430 | 0.800377 | 1.483172e-48 | -8.615850e-47 |
| Msa0348410 | Msa0883690 | 0.826584 | 2.503503e-54 | -8.615850e-47 |
| Msa0348410 | Msa0899900 | 0.806862 | 6.693828e-50 | -8.615850e-47 |
| Msa0348410 | Msa0938370 | 0.813835 | 2.093013e-51 | -8.615850e-47 |
| Msa0348410 | Msa0964570 | 0.853658 | 2.066548e-61 | -8.615850e-47 |
| Msa0348410 | Msa0967900 | 0.806240 | 9.056616e-50 | -8.615850e-47 |
| Msa0348410 | Msa0978290 | 0.848450 | 6.083370e-60 | -8.615850e-47 |
| Msa0348410 | Msa1004140 | 0.806181 | 9.318648e-50 | -8.615850e-47 |
| Msa0348410 | Msa1045860 | 0.879643 | 1.054358e-69 | -8.615850e-47 |
| Msa0348410 | Msa1045950 | 0.878080 | 3.751346e-69 | -8.615850e-47 |
| Msa0348410 | Msa1072640 | 0.806882 | 6.630001e-50 | -8.615850e-47 |
| Msa0348410 | Msa1087410 | 0.866040 | 3.811220e-65 | -8.615850e-47 |
| Msa0348410 | Msa1112050 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa0348410 | Msa1121580 | 0.803441 | 3.480699e-49 | -8.615850e-47 |
| Msa0348410 | Msa1134150 | 0.807617 | 4.631956e-50 | -8.615850e-47 |
| Msa0348410 | Msa1134230 | 0.808670 | 2.763779e-50 | -8.615850e-47 |
| Msa0348410 | Msa1136970 | 0.812579 | 3.949171e-51 | -8.615850e-47 |
| Msa0348410 | Msa1156270 | 0.827347 | 1.644960e-54 | -8.615850e-47 |
| Msa0348410 | Msa1156530 | 0.802534 | 5.361442e-49 | -8.615850e-47 |
| Msa0348410 | Msa1164830 | 0.812197 | 4.785667e-51 | -8.615850e-47 |
| Msa0348410 | Msa1166960 | 0.831919 | 1.270271e-55 | -8.615850e-47 |
| Msa0348410 | Msa1187050 | 0.807532 | 4.827022e-50 | -8.615850e-47 |
| Msa0348410 | Msa1191960 | 0.804844 | 1.777551e-49 | -8.615850e-47 |
| Msa0348410 | Msa1203840 | 0.815846 | 7.499003e-52 | -8.615850e-47 |
| Msa0348410 | Msa1203860 | 0.803809 | 2.919331e-49 | -8.615850e-47 |
| Msa0348410 | Msa1215790 | 0.809379 | 1.948076e-50 | -8.615850e-47 |
| Msa0348410 | Msa1258200 | 0.823604 | 1.266727e-53 | -8.615850e-47 |
| Msa0348410 | Msa1282600 | 0.803684 | 3.100013e-49 | -8.615850e-47 |
| Msa0348410 | Msa1296270 | 0.801120 | 1.045780e-48 | -8.615850e-47 |
| Msa0348410 | Msa1297540 | 0.800111 | 1.679697e-48 | -8.615850e-47 |
| Msa0348410 | Msa1327690 | 0.807932 | 3.970508e-50 | -8.615850e-47 |
| Msa0348410 | Msa1330910 | 0.810440 | 1.151281e-50 | -8.615850e-47 |
| Msa0348410 | Msa1345120 | 0.815652 | 8.282668e-52 | -8.615850e-47 |
| Msa0348410 | Msa1348860 | 0.835812 | 1.349314e-56 | -8.615850e-47 |
| Msa0348410 | Msa1365130 | 0.800587 | 1.344057e-48 | -8.615850e-47 |
| Msa0348410 | Msa1366700 | 0.817760 | 2.790404e-52 | -8.615850e-47 |
| Msa0348410 | Msa1367900 | 0.803740 | 3.017091e-49 | -8.615850e-47 |
| Msa0348410 | Msa1371060 | 0.840494 | 8.409068e-58 | -8.615850e-47 |
| Msa0348410 | Msa1373570 | 0.800662 | 1.297331e-48 | -8.615850e-47 |
| Msa0348410 | Msa1384980 | 0.806430 | 8.256709e-50 | -8.615850e-47 |
| Msa0348410 | Msa1431240 | 0.846238 | 2.462836e-59 | -8.615850e-47 |
| Msa0348410 | Msa1453180 | 0.800165 | 1.637845e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348410 | MtrunA17_Chr3g0080821 | 98.907 | 366 | 4 | 0 | 1 | 366 | 1 | 366 | 0.0 | 740 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0348410 | AT3G54360.1 | 66.667 | 366 | 106 | 2 | 5 | 354 | 31 | 396 | 8.88e-176 | 494 |
| Msa0348410 | AT3G54360.2 | 66.667 | 366 | 106 | 2 | 5 | 354 | 31 | 396 | 8.88e-176 | 494 |
Find 110 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACTTGTTCTTGTTTAT+TGG | 0.085712 | 3_1:-10707039 | None:intergenic |
| CAACTCCTTTAGTACCTTAT+TGG | 0.156109 | 3_1:+10707329 | Msa0348410:three_prime_UTR |
| GGCATGTATATTGCGCTTTA+AGG | 0.157277 | 3_1:+10703298 | Msa0348410:CDS |
| AACATCACGGCGAACATTTA+AGG | 0.189458 | 3_1:-10705503 | None:intergenic |
| TCCGTTTCGCTTAATAAAAT+TGG | 0.209504 | 3_1:+10705424 | Msa0348410:CDS |
| GTTCTTGTTTATTGGCCTTT+TGG | 0.209707 | 3_1:-10707031 | None:intergenic |
| GAGAAATACAGTGAATAAAA+AGG | 0.264568 | 3_1:-10707269 | None:intergenic |
| TGGTGACTATAACATGTATT+TGG | 0.277170 | 3_1:+10707572 | Msa0348410:three_prime_UTR |
| TCTCTCCTACTAGAACTTTC+CGG | 0.289488 | 3_1:+10707290 | Msa0348410:three_prime_UTR |
| AAAGTTGCCTAAAGATGATT+TGG | 0.309793 | 3_1:+10705272 | Msa0348410:CDS |
| TTTGGAAAGAGGTTCTTTCT+TGG | 0.311270 | 3_1:+10703490 | Msa0348410:CDS |
| GATTGGTCCTCTTAGTTGTA+TGG | 0.347050 | 3_1:+10703123 | Msa0348410:CDS |
| TAGTACCTTATTGGTGCATA+AGG | 0.347792 | 3_1:+10707338 | Msa0348410:three_prime_UTR |
| TATATACGAGGATGTGTCTT+TGG | 0.357386 | 3_1:+10703472 | Msa0348410:CDS |
| ACATAGGTTCAGTCTTGATT+TGG | 0.359386 | 3_1:-10704023 | None:intergenic |
| AGGTTCTTTCTTGGTGCAAC+AGG | 0.360238 | 3_1:+10703499 | Msa0348410:CDS |
| GTTTCCCTTATGCACCAATA+AGG | 0.366503 | 3_1:-10707343 | None:intergenic |
| TCAAGAAGCCATAGACTTGT+TGG | 0.370209 | 3_1:+10706668 | Msa0348410:CDS |
| ATTCAGAGTGATGAATATCT+TGG | 0.387031 | 3_1:+10707210 | Msa0348410:three_prime_UTR |
| TCAATATCAGCCCCACATAA+TGG | 0.389333 | 3_1:-10703326 | None:intergenic |
| GAAAGAAACAACGTTGTTGC+AGG | 0.393230 | 3_1:-10702135 | None:intergenic |
| TAAATGTTTCTGTATGTGAT+TGG | 0.393574 | 3_1:+10707122 | Msa0348410:three_prime_UTR |
| CAATTCAAATGTTTCATCTC+AGG | 0.394732 | 3_1:+10705534 | Msa0348410:CDS |
| TTCACAACTTGGAGCAGTCT+TGG | 0.399825 | 3_1:+10704099 | Msa0348410:CDS |
| GACACATCCTCGTATATAAC+AGG | 0.418665 | 3_1:-10703467 | None:intergenic |
| AAGAGATTCCAACAAGTCTA+TGG | 0.418820 | 3_1:-10706676 | None:intergenic |
| AGAACAAGGCACACATTTGC+TGG | 0.423636 | 3_1:-10703170 | None:intergenic |
| GGTGATCTTAAATATTATGA+TGG | 0.426058 | 3_1:+10705445 | Msa0348410:CDS |
| TGGGTATGCTTGGTGACTGC+TGG | 0.442245 | 3_1:+10704119 | Msa0348410:CDS |
| GAGCCCGATGCTGATCTTCA+AGG | 0.446498 | 3_1:+10703356 | Msa0348410:CDS |
| AGTACCTTATTGGTGCATAA+GGG | 0.456587 | 3_1:+10707339 | Msa0348410:three_prime_UTR |
| TTAGAAACATTACTGTCATC+CGG | 0.458910 | 3_1:-10702977 | None:intergenic |
| ATAACCTCCAAATCATCTTT+AGG | 0.460092 | 3_1:-10705279 | None:intergenic |
| ACTATAGAATGAGTTCAAGT+TGG | 0.463300 | 3_1:-10707455 | None:intergenic |
| TTAAGGACTGTCCATTATGT+GGG | 0.463879 | 3_1:+10703315 | Msa0348410:CDS |
| TTTAAGGACTGTCCATTATG+TGG | 0.466053 | 3_1:+10703314 | Msa0348410:CDS |
| TGAAAGTAAGGTTAAGAAAG+AGG | 0.469593 | 3_1:+10703039 | Msa0348410:CDS |
| TCACAACTTGGAGCAGTCTT+GGG | 0.474641 | 3_1:+10704100 | Msa0348410:CDS |
| GTAGTTGATCGCTTTATTGA+AGG | 0.475161 | 3_1:+10703380 | Msa0348410:CDS |
| AACATTACTGTCATCCGGCC+GGG | 0.476862 | 3_1:-10702972 | None:intergenic |
| TACTAGAACTTTCCGGTGAC+CGG | 0.478429 | 3_1:+10707297 | Msa0348410:three_prime_UTR |
| GTGATCTTAAATATTATGAT+GGG | 0.479498 | 3_1:+10705446 | Msa0348410:CDS |
| AGTACGACCTTGCAGCTTGA+AGG | 0.480052 | 3_1:-10705471 | None:intergenic |
| CTACATGCCTTGCTAGCAAA+AGG | 0.480898 | 3_1:+10707077 | Msa0348410:three_prime_UTR |
| GTCTCACCGAAGTGTCCGTT+GGG | 0.480992 | 3_1:+10703079 | Msa0348410:CDS |
| AGCCAGTGGACTTGAGCAAC+GGG | 0.481590 | 3_1:+10706713 | Msa0348410:CDS |
| TCATGTAGAGCATGAAAGTA+AGG | 0.483268 | 3_1:+10703027 | Msa0348410:CDS |
| TCTTGCAAAAGTAGCGGATG+TGG | 0.484863 | 3_1:+10706605 | Msa0348410:CDS |
| CAAAAGGAAAAGCATCAATT+CGG | 0.490665 | 3_1:+10707093 | Msa0348410:three_prime_UTR |
| TATCATTTCTAGTCAAAATG+AGG | 0.491303 | 3_1:+10707642 | Msa0348410:three_prime_UTR |
| GAGGATGTGTCTTTGGAAAG+AGG | 0.495437 | 3_1:+10703479 | Msa0348410:CDS |
| TACCCGTTGCTCAAGTCCAC+TGG | 0.497823 | 3_1:-10706715 | None:intergenic |
| AAGGTCATGCCAGGATCAAA+AGG | 0.498126 | 3_1:+10703399 | Msa0348410:CDS |
| GAACAAAGGCATTATAATAG+AGG | 0.499392 | 3_1:+10707171 | Msa0348410:three_prime_UTR |
| TCAGAGTTATGTTCACAACT+TGG | 0.500296 | 3_1:+10704088 | Msa0348410:CDS |
| CATCCTTCTATAGCGGCTAT+CGG | 0.503220 | 3_1:+10706989 | Msa0348410:intron |
| TCTTAGTTGTATGGTATGCC+AGG | 0.506853 | 3_1:+10703132 | Msa0348410:CDS |
| GTTGCCTAAAGATGATTTGG+AGG | 0.510008 | 3_1:+10705275 | Msa0348410:CDS |
| GGAGCAGTCTTGGGTATGCT+TGG | 0.510369 | 3_1:+10704109 | Msa0348410:CDS |
| TATAGAATATTCATAAATGT+TGG | 0.513127 | 3_1:+10707488 | Msa0348410:three_prime_UTR |
| ATGCACCAATAAGGTACTAA+AGG | 0.513642 | 3_1:-10707334 | None:intergenic |
| GCGGATGTGGACAAAAGTCT+AGG | 0.516734 | 3_1:+10706618 | Msa0348410:CDS |
| TGTGTGATGATGCGGTTGGT+TGG | 0.518754 | 3_1:-10702061 | None:intergenic |
| AGACTTCCTTAGAAGCCAAA+AGG | 0.521354 | 3_1:+10707016 | Msa0348410:CDS |
| TTGTGATCCTCTCCGGTCAC+CGG | 0.522149 | 3_1:-10707309 | None:intergenic |
| CACTTTCTAAATTCTGAGCA+CGG | 0.525130 | 3_1:-10704000 | None:intergenic |
| CGGATGTGGACAAAAGTCTA+GGG | 0.527420 | 3_1:+10706619 | Msa0348410:CDS |
| AAAGGAGTTGTGATCCTCTC+CGG | 0.537504 | 3_1:-10707316 | None:intergenic |
| TGTCTCACCGAAGTGTCCGT+TGG | 0.544563 | 3_1:+10703078 | Msa0348410:CDS |
| ACACCTTGAAGATCAGCATC+GGG | 0.547362 | 3_1:-10703359 | None:intergenic |
| CAAGTTGAACAAACACTATG+AGG | 0.547805 | 3_1:+10707053 | Msa0348410:CDS |
| AACTGCTATCACCCATTGCT+CGG | 0.561570 | 3_1:-10705209 | None:intergenic |
| TGTTCGCAGTCAGATAGAAA+AGG | 0.565529 | 3_1:+10704054 | Msa0348410:CDS |
| AAACATTACTGTCATCCGGC+CGG | 0.565772 | 3_1:-10702973 | None:intergenic |
| TCATGTGTAAAATAAAGCTC+AGG | 0.568004 | 3_1:+10707147 | Msa0348410:three_prime_UTR |
| TGGCATACCATACAACTAAG+AGG | 0.568439 | 3_1:-10703130 | None:intergenic |
| GGATTGTGTGATGATGCGGT+TGG | 0.572386 | 3_1:-10702065 | None:intergenic |
| ACATTACTGTCATCCGGCCG+GGG | 0.574631 | 3_1:-10702971 | None:intergenic |
| GGTCACCGGAAAGTTCTAGT+AGG | 0.577461 | 3_1:-10707295 | None:intergenic |
| GATGAAAAGTCCGCTAGCGA+TGG | 0.578653 | 3_1:+10706642 | Msa0348410:CDS |
| AGGTCTGTTAATTTAGACAA+TGG | 0.578810 | 3_1:+10703419 | Msa0348410:CDS |
| TACACCTTGAAGATCAGCAT+CGG | 0.579839 | 3_1:-10703360 | None:intergenic |
| CTTGGTGCAACAGGCCATGA+GGG | 0.579935 | 3_1:+10703508 | Msa0348410:CDS |
| TCATATCCCAACGGACACTT+CGG | 0.581365 | 3_1:-10703085 | None:intergenic |
| GCTTTATTGAAGGTCATGCC+AGG | 0.582251 | 3_1:+10703390 | Msa0348410:CDS |
| TTGCAGAAAACGTGAGAACA+AGG | 0.583502 | 3_1:-10703184 | None:intergenic |
| TTGTGGATTGTGTGATGATG+CGG | 0.585635 | 3_1:-10702069 | None:intergenic |
| AAGCCAGTGGACTTGAGCAA+CGG | 0.586144 | 3_1:+10706712 | Msa0348410:CDS |
| TAAGGACTGTCCATTATGTG+GGG | 0.597291 | 3_1:+10703316 | Msa0348410:CDS |
| ATATTAGTTACATTATTGCA+AGG | 0.608938 | 3_1:-10707379 | None:intergenic |
| GATGAATTCTGAGGAAATTG+TGG | 0.609327 | 3_1:-10702086 | None:intergenic |
| TGGTGTCGAATAGAAGTGCC+TGG | 0.612439 | 3_1:-10703150 | None:intergenic |
| ATGGGGACCTTCAAGCTGCA+AGG | 0.614405 | 3_1:+10705464 | Msa0348410:CDS |
| TGTTTCTCTTGCAAAAGTAG+CGG | 0.619467 | 3_1:+10706599 | Msa0348410:CDS |
| TCTTGGTGCAACAGGCCATG+AGG | 0.620045 | 3_1:+10703507 | Msa0348410:CDS |
| AATAAAGCTCAGGTGAACAA+AGG | 0.621839 | 3_1:+10707157 | Msa0348410:three_prime_UTR |
| TTCTTGAAATCCATCGCTAG+CGG | 0.626438 | 3_1:-10706652 | None:intergenic |
| AAACTAGAAATGAAGTAACA+TGG | 0.628201 | 3_1:+10707413 | Msa0348410:three_prime_UTR |
| GAAGTAACATGGATGTATGT+CGG | 0.632354 | 3_1:+10707424 | Msa0348410:three_prime_UTR |
| AATTGTTCTTGACAACATCA+CGG | 0.633322 | 3_1:-10705516 | None:intergenic |
| TGATCTTAAATATTATGATG+GGG | 0.641979 | 3_1:+10705447 | Msa0348410:CDS |
| GTCTGTGAGTCATATCCCAA+CGG | 0.646935 | 3_1:-10703094 | None:intergenic |
| CGCAGTCAGATAGAAAAGGT+CGG | 0.648084 | 3_1:+10704058 | Msa0348410:CDS |
| TGCGAACATCTTCTGCACAT+AGG | 0.654909 | 3_1:-10704039 | None:intergenic |
| TTGAAAAGGACATACCCTCA+TGG | 0.661737 | 3_1:-10703522 | None:intergenic |
| GAACTTTCCGGTGACCGGAG+AGG | 0.682585 | 3_1:+10707302 | Msa0348410:three_prime_UTR |
| GGATGTGGACAAAAGTCTAG+GGG | 0.700647 | 3_1:+10706620 | Msa0348410:CDS |
| TAATAAGCCTGTTATATACG+AGG | 0.704805 | 3_1:+10703460 | Msa0348410:CDS |
| GAATTGTGCGATGAATTCTG+AGG | 0.725423 | 3_1:-10702095 | None:intergenic |
| ACATTGAAATCTGAAGCCAG+TGG | 0.739359 | 3_1:+10706699 | Msa0348410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATTCATTTTGTAAAAT+TGG | + | chr3_1:10707547-10707566 | Msa0348410:three_prime_UTR | 10.0% |
| !!! | TTGAATCTTGATATTATTTT+CGG | + | chr3_1:10702223-10702242 | Msa0348410:intron | 15.0% |
| !!! | AATATCATCAATTTTCAAAA+GGG | - | chr3_1:10702252-10702271 | None:intergenic | 15.0% |
| !! | AAATTAAATTTGTGAAAGAA+TGG | + | chr3_1:10703575-10703594 | Msa0348410:intron | 15.0% |
| !! | TTTCATGTTTAATAATACTT+CGG | + | chr3_1:10703701-10703720 | Msa0348410:intron | 15.0% |
| !! | AAATATTGTTTAGACATATA+TGG | + | chr3_1:10704177-10704196 | Msa0348410:intron | 15.0% |
| !! | ATTGTAGATATAGATAAAAA+TGG | - | chr3_1:10704687-10704706 | None:intergenic | 15.0% |
| !! | AACTATATAATAATGTGTTT+AGG | - | chr3_1:10704965-10704984 | None:intergenic | 15.0% |
| !! | ATTGTTTCACAAAATATAAA+AGG | + | chr3_1:10705121-10705140 | Msa0348410:intron | 15.0% |
| !! | TTGTTTCACAAAATATAAAA+GGG | + | chr3_1:10705122-10705141 | Msa0348410:intron | 15.0% |
| !!! | AAGCAAATTTTATTTTCAAA+CGG | - | chr3_1:10706113-10706132 | None:intergenic | 15.0% |
| !!! | TTATGTTTTTATCATTTTCA+TGG | - | chr3_1:10706209-10706228 | None:intergenic | 15.0% |
| !! | TTGATATAAACAATGAAAAA+AGG | - | chr3_1:10706560-10706579 | None:intergenic | 15.0% |
| !! | TTCATTGTTTATATCAATTT+AGG | + | chr3_1:10706563-10706582 | Msa0348410:intron | 15.0% |
| !! | TATAGAATATTCATAAATGT+TGG | + | chr3_1:10707488-10707507 | Msa0348410:three_prime_UTR | 15.0% |
| !!! | CAATATCATCAATTTTCAAA+AGG | - | chr3_1:10702253-10702272 | None:intergenic | 20.0% |
| !!! | CTTTTGAAAATTGATGATAT+TGG | + | chr3_1:10702251-10702270 | Msa0348410:intron | 20.0% |
| !!! | TGATGATATTGGAATAATTT+TGG | + | chr3_1:10702262-10702281 | Msa0348410:intron | 20.0% |
| !!! | GATGATATTGGAATAATTTT+GGG | + | chr3_1:10702263-10702282 | Msa0348410:intron | 20.0% |
| !! | ATTTGTTTGTAATTCTATTC+TGG | + | chr3_1:10702342-10702361 | Msa0348410:intron | 20.0% |
| !! | TTTGTTTGTAATTCTATTCT+GGG | + | chr3_1:10702343-10702362 | Msa0348410:intron | 20.0% |
| !!! | GTTGCAAATTTTGTTTATAT+AGG | + | chr3_1:10702532-10702551 | Msa0348410:intron | 20.0% |
| !! | ATTTGTGTTTATAACTTATG+AGG | + | chr3_1:10702797-10702816 | Msa0348410:intron | 20.0% |
| !! | AGTTAATGACAAAAATTTCA+AGG | - | chr3_1:10703606-10703625 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTATCCAAAACA+GGG | - | chr3_1:10703727-10703746 | None:intergenic | 20.0% |
| !!! | AAAGTTTTTTTATCCAAAAC+AGG | - | chr3_1:10703728-10703747 | None:intergenic | 20.0% |
| !! | TGTTGAATTCAAATCATAAT+TGG | + | chr3_1:10704613-10704632 | Msa0348410:intron | 20.0% |
| !! | ATATAATAATGTGTTTAGGA+GGG | - | chr3_1:10704961-10704980 | None:intergenic | 20.0% |
| !! | TATATAATAATGTGTTTAGG+AGG | - | chr3_1:10704962-10704981 | None:intergenic | 20.0% |
| !! | GACAATTATTTGAAAAATGT+TGG | - | chr3_1:10704995-10705014 | None:intergenic | 20.0% |
| !! | AAACAATAACAAATATGGTT+CGG | - | chr3_1:10705108-10705127 | None:intergenic | 20.0% |
| !! | TTGTGAAACAATAACAAATA+TGG | - | chr3_1:10705113-10705132 | None:intergenic | 20.0% |
| !! | GTGATCTTAAATATTATGAT+GGG | + | chr3_1:10705446-10705465 | Msa0348410:CDS | 20.0% |
| !! | TGATCTTAAATATTATGATG+GGG | + | chr3_1:10705447-10705466 | Msa0348410:CDS | 20.0% |
| !! | TTTGAATTATATCTAATCGT+AGG | + | chr3_1:10705580-10705599 | Msa0348410:intron | 20.0% |
| !! | TTGAATTATATCTAATCGTA+GGG | + | chr3_1:10705581-10705600 | Msa0348410:intron | 20.0% |
| !!! | TCAAATAAAACTTTAAAGCA+AGG | - | chr3_1:10705614-10705633 | None:intergenic | 20.0% |
| !!! | AATAAACTGAAAACATCTTT+TGG | - | chr3_1:10705723-10705742 | None:intergenic | 20.0% |
| !! | GAAAATAGATTATAGCTTAT+AGG | + | chr3_1:10705758-10705777 | Msa0348410:intron | 20.0% |
| !! | AATTATTTGTTTATCGAAAC+AGG | + | chr3_1:10705884-10705903 | Msa0348410:intron | 20.0% |
| !! | ATTATTTGTTTATCGAAACA+GGG | + | chr3_1:10705885-10705904 | Msa0348410:intron | 20.0% |
| !! | AAATCACATCATGAAATATT+TGG | - | chr3_1:10705951-10705970 | None:intergenic | 20.0% |
| !!! | AAATAAAATTTGCTTTGACA+AGG | + | chr3_1:10706118-10706137 | Msa0348410:intron | 20.0% |
| !! | ATATTAGTTACATTATTGCA+AGG | - | chr3_1:10707382-10707401 | None:intergenic | 20.0% |
| !!! | TTCATTTTGTAAAATTGGTT+TGG | + | chr3_1:10707552-10707571 | Msa0348410:three_prime_UTR | 20.0% |
| !! | GAATGATACTTTTGTGTTTT+TGG | + | chr3_1:10702510-10702529 | Msa0348410:intron | 25.0% |
| !!! | ATTTTAACAAAAGGACATAC+TGG | - | chr3_1:10702950-10702969 | None:intergenic | 25.0% |
| !! | GAATGAAGTCTTATATATGA+AGG | + | chr3_1:10703549-10703568 | Msa0348410:intron | 25.0% |
| ! | TAACCTATAAGTTGTTTATC+TGG | + | chr3_1:10703848-10703867 | Msa0348410:intron | 25.0% |
| ! | TATCCAGATAAACAACTTAT+AGG | - | chr3_1:10703854-10703873 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCTGGATA+TGG | + | chr3_1:10703854-10703873 | Msa0348410:intron | 25.0% |
| !!! | ACCATTTGTAATTCTAAAAC+AGG | + | chr3_1:10703973-10703992 | Msa0348410:intron | 25.0% |
| ! | ATTGTTTAGACATATATGGT+TGG | + | chr3_1:10704181-10704200 | Msa0348410:intron | 25.0% |
| ! | AATGTTTAGATTAGAATCAG+TGG | + | chr3_1:10704573-10704592 | Msa0348410:intron | 25.0% |
| ! | TCAAATCATAATTGGTATTG+AGG | + | chr3_1:10704621-10704640 | Msa0348410:intron | 25.0% |
| !! | CAAATCATAATTGGTATTGA+GGG | + | chr3_1:10704622-10704641 | Msa0348410:intron | 25.0% |
| ! | AAACTAGCAAAAACTAATTC+TGG | - | chr3_1:10704760-10704779 | None:intergenic | 25.0% |
| ! | TATAATAATGTGTTTAGGAG+GGG | - | chr3_1:10704960-10704979 | None:intergenic | 25.0% |
| ! | ATTTGAAAAATGTTGGAAGT+TGG | - | chr3_1:10704988-10705007 | None:intergenic | 25.0% |
| ! | AACAATAACAAATATGGTTC+GGG | - | chr3_1:10705107-10705126 | None:intergenic | 25.0% |
| !! | ACCAATTTTATTAAGCGAAA+CGG | - | chr3_1:10705428-10705447 | None:intergenic | 25.0% |
| ! | GGTGATCTTAAATATTATGA+TGG | + | chr3_1:10705445-10705464 | Msa0348410:CDS | 25.0% |
| !!! | ATAAAACTTTAAAGCAAGGT+GGG | - | chr3_1:10705610-10705629 | None:intergenic | 25.0% |
| !!! | AATAAAACTTTAAAGCAAGG+TGG | - | chr3_1:10705611-10705630 | None:intergenic | 25.0% |
| ! | GAACTTATAGAAACAACTTA+TGG | + | chr3_1:10705692-10705711 | Msa0348410:intron | 25.0% |
| !! | TGATAAGCTTTTACATCTTA+TGG | + | chr3_1:10705850-10705869 | Msa0348410:intron | 25.0% |
| ! | ATGAATCTAACTAATGTGAT+TGG | - | chr3_1:10705977-10705996 | None:intergenic | 25.0% |
| ! | CATAATAGAAAGAGAAAAGA+AGG | + | chr3_1:10706224-10706243 | Msa0348410:intron | 25.0% |
| ! | AGCAAGATAAATTGTACTTA+TGG | - | chr3_1:10706438-10706457 | None:intergenic | 25.0% |
| ! | AAAGATTCAATTAACCTAAG+TGG | - | chr3_1:10706467-10706486 | None:intergenic | 25.0% |
| ! | GATGATATAACTTGATTCAA+TGG | + | chr3_1:10706865-10706884 | Msa0348410:intron | 25.0% |
| ! | TATAACTTGATTCAATGGTT+AGG | + | chr3_1:10706870-10706889 | Msa0348410:intron | 25.0% |
| ! | TACTTCATCTAATAACTTTG+TGG | - | chr3_1:10706921-10706940 | None:intergenic | 25.0% |
| !! | TAAATGTTTCTGTATGTGAT+TGG | + | chr3_1:10707122-10707141 | Msa0348410:three_prime_UTR | 25.0% |
| !!! | ATGAATATCTTGGTCATTTT+TGG | + | chr3_1:10707220-10707239 | Msa0348410:three_prime_UTR | 25.0% |
| ! | GAGAAATACAGTGAATAAAA+AGG | - | chr3_1:10707272-10707291 | None:intergenic | 25.0% |
| ! | AAACTAGAAATGAAGTAACA+TGG | + | chr3_1:10707413-10707432 | Msa0348410:three_prime_UTR | 25.0% |
| !!! | TTCATAAATGTTGGTGTTTT+TGG | + | chr3_1:10707497-10707516 | Msa0348410:three_prime_UTR | 25.0% |
| !!! | TATCATTTCTAGTCAAAATG+AGG | + | chr3_1:10707642-10707661 | Msa0348410:three_prime_UTR | 25.0% |
| !! | TTGGAATAATTTTGGGTACT+TGG | + | chr3_1:10702270-10702289 | Msa0348410:intron | 30.0% |
| !! | TGGAATAATTTTGGGTACTT+GGG | + | chr3_1:10702271-10702290 | Msa0348410:intron | 30.0% |
| TTGTAATTCTATTCTGGGTA+TGG | + | chr3_1:10702348-10702367 | Msa0348410:intron | 30.0% | |
| TTAGAAACATTACTGTCATC+CGG | - | chr3_1:10702980-10702999 | None:intergenic | 30.0% | |
| TGAAAGTAAGGTTAAGAAAG+AGG | + | chr3_1:10703039-10703058 | Msa0348410:CDS | 30.0% | |
| AGGTCTGTTAATTTAGACAA+TGG | + | chr3_1:10703419-10703438 | Msa0348410:CDS | 30.0% | |
| TAATAAGCCTGTTATATACG+AGG | + | chr3_1:10703460-10703479 | Msa0348410:CDS | 30.0% | |
| GACTTCATTCACATTTGAAA+AGG | - | chr3_1:10703539-10703558 | None:intergenic | 30.0% | |
| ATTATCATCCACAATGAAAG+TGG | + | chr3_1:10703626-10703645 | Msa0348410:intron | 30.0% | |
| GGTAAAATGCTATTATCAAG+TGG | - | chr3_1:10703956-10703975 | None:intergenic | 30.0% | |
| !!! | GCCTGTTTTAGAATTACAAA+TGG | - | chr3_1:10703977-10703996 | None:intergenic | 30.0% |
| TAAAGATACAGTCGAAATAC+TGG | + | chr3_1:10704298-10704317 | Msa0348410:intron | 30.0% | |
| ACGTTGTATCATAGCAAAAT+TGG | + | chr3_1:10704455-10704474 | Msa0348410:intron | 30.0% | |
| !! | CTGTTTGCTTTTATCTTTCT+TGG | - | chr3_1:10704552-10704571 | None:intergenic | 30.0% |
| CAAGAAAGATAAAAGCAAAC+AGG | + | chr3_1:10704550-10704569 | Msa0348410:intron | 30.0% | |
| AGATTAGAATCAGTGGATAT+TGG | + | chr3_1:10704580-10704599 | Msa0348410:intron | 30.0% | |
| ATAATAATGTGTTTAGGAGG+GGG | - | chr3_1:10704959-10704978 | None:intergenic | 30.0% | |
| AAAGTTGCCTAAAGATGATT+TGG | + | chr3_1:10705272-10705291 | Msa0348410:CDS | 30.0% | |
| ATAACCTCCAAATCATCTTT+AGG | - | chr3_1:10705282-10705301 | None:intergenic | 30.0% | |
| AAAGTGTATGTGTAATCTGT+AGG | - | chr3_1:10705405-10705424 | None:intergenic | 30.0% | |
| TCCGTTTCGCTTAATAAAAT+TGG | + | chr3_1:10705424-10705443 | Msa0348410:CDS | 30.0% | |
| AATTGTTCTTGACAACATCA+CGG | - | chr3_1:10705519-10705538 | None:intergenic | 30.0% | |
| CAATTCAAATGTTTCATCTC+AGG | + | chr3_1:10705534-10705553 | Msa0348410:CDS | 30.0% | |
| TTTCTATAAGTTCTCGCAAA+CGG | - | chr3_1:10705685-10705704 | None:intergenic | 30.0% | |
| ! | GTTTTCAGTTTATTTCCGTA+TGG | + | chr3_1:10705729-10705748 | Msa0348410:intron | 30.0% |
| ! | TCTATTTTCTTTGAGCCATA+CGG | - | chr3_1:10705747-10705766 | None:intergenic | 30.0% |
| ! | TAGATTCATTTCTAGACATG+AGG | + | chr3_1:10705988-10706007 | Msa0348410:intron | 30.0% |
| ! | AGATTCATTTCTAGACATGA+GGG | + | chr3_1:10705989-10706008 | Msa0348410:intron | 30.0% |
| ! | AAAATTTGCTTTGACAAGGT+TGG | + | chr3_1:10706122-10706141 | Msa0348410:intron | 30.0% |
| ! | AAATTTGCTTTGACAAGGTT+GGG | + | chr3_1:10706123-10706142 | Msa0348410:intron | 30.0% |
| TGCACTAGTGAAAACTAAAA+TGG | + | chr3_1:10706301-10706320 | Msa0348410:intron | 30.0% | |
| ! | ATAACTTTTCCACTAATCAG+AGG | + | chr3_1:10706328-10706347 | Msa0348410:intron | 30.0% |
| !! | CAAAAGGAAAAGCATCAATT+CGG | + | chr3_1:10707093-10707112 | Msa0348410:three_prime_UTR | 30.0% |
| TCATGTGTAAAATAAAGCTC+AGG | + | chr3_1:10707147-10707166 | Msa0348410:three_prime_UTR | 30.0% | |
| !! | GAACAAAGGCATTATAATAG+AGG | + | chr3_1:10707171-10707190 | Msa0348410:three_prime_UTR | 30.0% |
| ATTCAGAGTGATGAATATCT+TGG | + | chr3_1:10707210-10707229 | Msa0348410:three_prime_UTR | 30.0% | |
| ACTATAGAATGAGTTCAAGT+TGG | - | chr3_1:10707458-10707477 | None:intergenic | 30.0% | |
| TGGTGACTATAACATGTATT+TGG | + | chr3_1:10707572-10707591 | Msa0348410:three_prime_UTR | 30.0% | |
| AGCACGTTTAATGTTCAAAT+TGG | + | chr3_1:10707613-10707632 | Msa0348410:intron | 30.0% | |
| ! | GATGAATTCTGAGGAAATTG+TGG | - | chr3_1:10702089-10702108 | None:intergenic | 35.0% |
| AATTCTATTCTGGGTATGGT+TGG | + | chr3_1:10702352-10702371 | Msa0348410:intron | 35.0% | |
| TGCAAAGATGTTGCATTTGT+TGG | + | chr3_1:10702579-10702598 | Msa0348410:intron | 35.0% | |
| !!! | TGCGAAGATGTTGTTTTTGT+TGG | + | chr3_1:10702736-10702755 | Msa0348410:intron | 35.0% |
| ! | TTGCTACGTTTTCGTGTTTT+TGG | + | chr3_1:10702828-10702847 | Msa0348410:intron | 35.0% |
| ! | GCAAATGTCTTGTCTTTTGT+AGG | + | chr3_1:10702897-10702916 | Msa0348410:intron | 35.0% |
| ! | TCTTTTGTAGGTTCTTGTTG+TGG | + | chr3_1:10702909-10702928 | Msa0348410:intron | 35.0% |
| ! | GTCCTTTTGTTAAAATTCCC+CGG | + | chr3_1:10702954-10702973 | Msa0348410:CDS | 35.0% |
| TCATGTAGAGCATGAAAGTA+AGG | + | chr3_1:10703027-10703046 | Msa0348410:CDS | 35.0% | |
| !!! | GACTCACAGACTTTTAAGAT+TGG | + | chr3_1:10703106-10703125 | Msa0348410:CDS | 35.0% |
| ! | TTTTCTGCAAGTATGTATCG+TGG | + | chr3_1:10703197-10703216 | Msa0348410:intron | 35.0% |
| TTTAAGGACTGTCCATTATG+TGG | + | chr3_1:10703314-10703333 | Msa0348410:CDS | 35.0% | |
| TTAAGGACTGTCCATTATGT+GGG | + | chr3_1:10703315-10703334 | Msa0348410:CDS | 35.0% | |
| ! | GTAGTTGATCGCTTTATTGA+AGG | + | chr3_1:10703380-10703399 | Msa0348410:CDS | 35.0% |
| ! | ATTAACAGACCTTTTGATCC+TGG | - | chr3_1:10703411-10703430 | None:intergenic | 35.0% |
| TATATACGAGGATGTGTCTT+TGG | + | chr3_1:10703472-10703491 | Msa0348410:CDS | 35.0% | |
| TTTGGAAAGAGGTTCTTTCT+TGG | + | chr3_1:10703490-10703509 | Msa0348410:CDS | 35.0% | |
| ! | ACTTTTGATACATTCTGAGC+TGG | + | chr3_1:10703669-10703688 | Msa0348410:intron | 35.0% |
| CACTTTCTAAATTCTGAGCA+CGG | - | chr3_1:10704003-10704022 | None:intergenic | 35.0% | |
| ACATAGGTTCAGTCTTGATT+TGG | - | chr3_1:10704026-10704045 | None:intergenic | 35.0% | |
| TCAGAGTTATGTTCACAACT+TGG | + | chr3_1:10704088-10704107 | Msa0348410:CDS | 35.0% | |
| CTAAGAGTAGTGTATCTGTT+AGG | + | chr3_1:10704233-10704252 | Msa0348410:intron | 35.0% | |
| TAGTGTATCTGTTAGGACTT+AGG | + | chr3_1:10704240-10704259 | Msa0348410:intron | 35.0% | |
| ! | CTTAGGAGTTTCATTGATTG+AGG | + | chr3_1:10704257-10704276 | Msa0348410:intron | 35.0% |
| TAACCAGTGTTGTCAAATAG+CGG | + | chr3_1:10704330-10704349 | Msa0348410:intron | 35.0% | |
| CTGTCAAATAGCAGTTATAG+TGG | + | chr3_1:10704425-10704444 | Msa0348410:intron | 35.0% | |
| ! | GCTATATGCAGTTTTACTGT+CGG | - | chr3_1:10704519-10704538 | None:intergenic | 35.0% |
| AAAAGCAGTATTCGCCTTTA+TGG | + | chr3_1:10704731-10704750 | Msa0348410:intron | 35.0% | |
| ACTAATTCTGGACACCATAA+AGG | - | chr3_1:10704748-10704767 | None:intergenic | 35.0% | |
| !! | GTTCTCTCACACTTTGAAAT+AGG | + | chr3_1:10704784-10704803 | Msa0348410:intron | 35.0% |
| !! | AAATAGGTCCCAAAAGCATT+AGG | + | chr3_1:10704800-10704819 | Msa0348410:intron | 35.0% |
| !!! | TCCCAAAAGCATTAGGTTTT+TGG | + | chr3_1:10704807-10704826 | Msa0348410:intron | 35.0% |
| ! | CCCAAAAACCTAATGCTTTT+GGG | - | chr3_1:10704811-10704830 | None:intergenic | 35.0% |
| !!! | CCCAAAAGCATTAGGTTTTT+GGG | + | chr3_1:10704808-10704827 | Msa0348410:intron | 35.0% |
| !!! | CCAAAAGCATTAGGTTTTTG+GGG | + | chr3_1:10704809-10704828 | Msa0348410:intron | 35.0% |
| TAGTTTGAGCTAAGGAAATC+GGG | - | chr3_1:10704920-10704939 | None:intergenic | 35.0% | |
| CTAGTTTGAGCTAAGGAAAT+CGG | - | chr3_1:10704921-10704940 | None:intergenic | 35.0% | |
| CACTAAAGCAAAGAAAAGCA+AGG | - | chr3_1:10705315-10705334 | None:intergenic | 35.0% | |
| TCAAATGTTTCATCTCAGGT+TGG | + | chr3_1:10705538-10705557 | Msa0348410:intron | 35.0% | |
| AAGCTAAAATCCACATACTG+AGG | - | chr3_1:10705911-10705930 | None:intergenic | 35.0% | |
| ! | GATTCATTTCTAGACATGAG+GGG | + | chr3_1:10705990-10706009 | Msa0348410:intron | 35.0% |
| AGTTAAGAAGCAGACTGATA+AGG | + | chr3_1:10706043-10706062 | Msa0348410:intron | 35.0% | |
| TCCCAGCATAATACTAACAT+GGG | + | chr3_1:10706087-10706106 | Msa0348410:intron | 35.0% | |
| AATCTCAGAAATCAGAACAC+AGG | - | chr3_1:10706183-10706202 | None:intergenic | 35.0% | |
| ATAGAAAGAGAAAAGAAGGC+AGG | + | chr3_1:10706228-10706247 | Msa0348410:intron | 35.0% | |
| TTACAAGAACTCACGTAATG+AGG | - | chr3_1:10706366-10706385 | None:intergenic | 35.0% | |
| ATCTTGCTCATTAACCACTT+AGG | + | chr3_1:10706450-10706469 | Msa0348410:intron | 35.0% | |
| TGTTTCTCTTGCAAAAGTAG+CGG | + | chr3_1:10706599-10706618 | Msa0348410:CDS | 35.0% | |
| AAGAGATTCCAACAAGTCTA+TGG | - | chr3_1:10706679-10706698 | None:intergenic | 35.0% | |
| CAATTTCCATCCTTCTATAG+CGG | + | chr3_1:10706982-10707001 | Msa0348410:intron | 35.0% | |
| !!! | GTTCTTGTTTATTGGCCTTT+TGG | - | chr3_1:10707034-10707053 | None:intergenic | 35.0% |
| AATAAAGCTCAGGTGAACAA+AGG | + | chr3_1:10707157-10707176 | Msa0348410:three_prime_UTR | 35.0% | |
| CAACTCCTTTAGTACCTTAT+TGG | + | chr3_1:10707329-10707348 | Msa0348410:three_prime_UTR | 35.0% | |
| ! | ATGCACCAATAAGGTACTAA+AGG | - | chr3_1:10707337-10707356 | None:intergenic | 35.0% |
| TAGTACCTTATTGGTGCATA+AGG | + | chr3_1:10707338-10707357 | Msa0348410:three_prime_UTR | 35.0% | |
| AGTACCTTATTGGTGCATAA+GGG | + | chr3_1:10707339-10707358 | Msa0348410:three_prime_UTR | 35.0% | |
| GAAGTAACATGGATGTATGT+CGG | + | chr3_1:10707424-10707443 | Msa0348410:three_prime_UTR | 35.0% | |
| ! | TTGTGGATTGTGTGATGATG+CGG | - | chr3_1:10702072-10702091 | None:intergenic | 40.0% |
| GAATTGTGCGATGAATTCTG+AGG | - | chr3_1:10702098-10702117 | None:intergenic | 40.0% | |
| GAAAGAAACAACGTTGTTGC+AGG | - | chr3_1:10702138-10702157 | None:intergenic | 40.0% | |
| ! | TATTCTGGGTATGGTTGGTT+TGG | + | chr3_1:10702357-10702376 | Msa0348410:intron | 40.0% |
| ! | TTTTGTTAAAATTCCCCGGC+CGG | + | chr3_1:10702958-10702977 | Msa0348410:CDS | 40.0% |
| ! | GATTGGTCCTCTTAGTTGTA+TGG | + | chr3_1:10703123-10703142 | Msa0348410:CDS | 40.0% |
| TGGCATACCATACAACTAAG+AGG | - | chr3_1:10703133-10703152 | None:intergenic | 40.0% | |
| TCTTAGTTGTATGGTATGCC+AGG | + | chr3_1:10703132-10703151 | Msa0348410:CDS | 40.0% | |
| TTGCAGAAAACGTGAGAACA+AGG | - | chr3_1:10703187-10703206 | None:intergenic | 40.0% | |
| TTTATGTCTGTCTCTTGTGC+AGG | + | chr3_1:10703276-10703295 | Msa0348410:intron | 40.0% | |
| TTATGTCTGTCTCTTGTGCA+GGG | + | chr3_1:10703277-10703296 | Msa0348410:intron | 40.0% | |
| GGCATGTATATTGCGCTTTA+AGG | + | chr3_1:10703298-10703317 | Msa0348410:CDS | 40.0% | |
| TAAGGACTGTCCATTATGTG+GGG | + | chr3_1:10703316-10703335 | Msa0348410:CDS | 40.0% | |
| TCAATATCAGCCCCACATAA+TGG | - | chr3_1:10703329-10703348 | None:intergenic | 40.0% | |
| TACACCTTGAAGATCAGCAT+CGG | - | chr3_1:10703363-10703382 | None:intergenic | 40.0% | |
| GACACATCCTCGTATATAAC+AGG | - | chr3_1:10703470-10703489 | None:intergenic | 40.0% | |
| TTGAAAAGGACATACCCTCA+TGG | - | chr3_1:10703525-10703544 | None:intergenic | 40.0% | |
| CATAGTCACCACTTTCATTG+TGG | - | chr3_1:10703637-10703656 | None:intergenic | 40.0% | |
| ! | ATAATACTTCGGCCCTGTTT+TGG | + | chr3_1:10703712-10703731 | Msa0348410:intron | 40.0% |
| TCTGGATATGGCATTGTTGA+TGG | + | chr3_1:10703866-10703885 | Msa0348410:intron | 40.0% | |
| TGTTCGCAGTCAGATAGAAA+AGG | + | chr3_1:10704054-10704073 | Msa0348410:CDS | 40.0% | |
| !!! | GTATTGAGGGTTTCGAGTTT+TGG | + | chr3_1:10704635-10704654 | Msa0348410:intron | 40.0% |
| ! | CCCCAAAAACCTAATGCTTT+TGG | - | chr3_1:10704812-10704831 | None:intergenic | 40.0% |
| !! | AGCATTAGGTTTTTGGGGAT+AGG | + | chr3_1:10704814-10704833 | Msa0348410:intron | 40.0% |
| AGTTTGAGCTAAGGAAATCG+GGG | - | chr3_1:10704919-10704938 | None:intergenic | 40.0% | |
| ! | AGGTCAACTAGTTTGAGCTA+AGG | - | chr3_1:10704928-10704947 | None:intergenic | 40.0% |
| ATGAAACAGGAAAGGGCAAA+AGG | - | chr3_1:10705080-10705099 | None:intergenic | 40.0% | |
| GGGATGAATGAAACAGGAAA+GGG | - | chr3_1:10705087-10705106 | None:intergenic | 40.0% | |
| ! | GTTGCCTAAAGATGATTTGG+AGG | + | chr3_1:10705275-10705294 | Msa0348410:CDS | 40.0% |
| AACATCACGGCGAACATTTA+AGG | - | chr3_1:10705506-10705525 | None:intergenic | 40.0% | |
| TAAGAAGCAGACTGATAAGG+AGG | + | chr3_1:10706046-10706065 | Msa0348410:intron | 40.0% | |
| TTAGTATTATGCTGGGACTG+GGG | - | chr3_1:10706084-10706103 | None:intergenic | 40.0% | |
| GTTAGTATTATGCTGGGACT+GGG | - | chr3_1:10706085-10706104 | None:intergenic | 40.0% | |
| TGTTAGTATTATGCTGGGAC+TGG | - | chr3_1:10706086-10706105 | None:intergenic | 40.0% | |
| GTCCCAGCATAATACTAACA+TGG | + | chr3_1:10706086-10706105 | Msa0348410:intron | 40.0% | |
| GCCCATGTTAGTATTATGCT+GGG | - | chr3_1:10706091-10706110 | None:intergenic | 40.0% | |
| ! | GTTTTCACTAGTGCACAAAC+AGG | - | chr3_1:10706296-10706315 | None:intergenic | 40.0% |
| TCACGTAATGAGGAAACTAC+GGG | - | chr3_1:10706356-10706375 | None:intergenic | 40.0% | |
| CTCACGTAATGAGGAAACTA+CGG | - | chr3_1:10706357-10706376 | None:intergenic | 40.0% | |
| CCAAATGACATGTTCTAACG+TGG | - | chr3_1:10706508-10706527 | None:intergenic | 40.0% | |
| CCACGTTAGAACATGTCATT+TGG | + | chr3_1:10706505-10706524 | Msa0348410:intron | 40.0% | |
| ! | GAACATGTCATTTGGACAGA+AGG | + | chr3_1:10706513-10706532 | Msa0348410:intron | 40.0% |
| TTCTTGAAATCCATCGCTAG+CGG | - | chr3_1:10706655-10706674 | None:intergenic | 40.0% | |
| TCAAGAAGCCATAGACTTGT+TGG | + | chr3_1:10706668-10706687 | Msa0348410:CDS | 40.0% | |
| ! | ACATTGAAATCTGAAGCCAG+TGG | + | chr3_1:10706699-10706718 | Msa0348410:CDS | 40.0% |
| AGACTTCCTTAGAAGCCAAA+AGG | + | chr3_1:10707016-10707035 | Msa0348410:CDS | 40.0% | |
| !!! | TATTGGCCTTTTGGCTTCTA+AGG | - | chr3_1:10707025-10707044 | None:intergenic | 40.0% |
| ! | TGCTTTTCCTTTTGCTAGCA+AGG | - | chr3_1:10707087-10707106 | None:intergenic | 40.0% |
| TCTCTCCTACTAGAACTTTC+CGG | + | chr3_1:10707290-10707309 | Msa0348410:three_prime_UTR | 40.0% | |
| GTTTCCCTTATGCACCAATA+AGG | - | chr3_1:10707346-10707365 | None:intergenic | 40.0% | |
| !! | GGCCGGGGAATTTTAACAAA+AGG | - | chr3_1:10702959-10702978 | None:intergenic | 45.0% |
| AAACATTACTGTCATCCGGC+CGG | - | chr3_1:10702976-10702995 | None:intergenic | 45.0% | |
| TCATATCCCAACGGACACTT+CGG | - | chr3_1:10703088-10703107 | None:intergenic | 45.0% | |
| GTCTGTGAGTCATATCCCAA+CGG | - | chr3_1:10703097-10703116 | None:intergenic | 45.0% | |
| AGAACAAGGCACACATTTGC+TGG | - | chr3_1:10703173-10703192 | None:intergenic | 45.0% | |
| ACACCTTGAAGATCAGCATC+GGG | - | chr3_1:10703362-10703381 | None:intergenic | 45.0% | |
| ! | GCTTTATTGAAGGTCATGCC+AGG | + | chr3_1:10703390-10703409 | Msa0348410:CDS | 45.0% |
| AAGGTCATGCCAGGATCAAA+AGG | + | chr3_1:10703399-10703418 | Msa0348410:CDS | 45.0% | |
| ! | GAGGATGTGTCTTTGGAAAG+AGG | + | chr3_1:10703479-10703498 | Msa0348410:CDS | 45.0% |
| ! | AGGTTCTTTCTTGGTGCAAC+AGG | + | chr3_1:10703499-10703518 | Msa0348410:CDS | 45.0% |
| CTGTAGCTTCAGCAGATCAA+GGG | - | chr3_1:10703895-10703914 | None:intergenic | 45.0% | |
| TGCGAACATCTTCTGCACAT+AGG | - | chr3_1:10704042-10704061 | None:intergenic | 45.0% | |
| CGCAGTCAGATAGAAAAGGT+CGG | + | chr3_1:10704058-10704077 | Msa0348410:CDS | 45.0% | |
| TTCACAACTTGGAGCAGTCT+TGG | + | chr3_1:10704099-10704118 | Msa0348410:CDS | 45.0% | |
| TCACAACTTGGAGCAGTCTT+GGG | + | chr3_1:10704100-10704119 | Msa0348410:CDS | 45.0% | |
| ! | GGTTGGTGCTTAGCGAAAAA+TGG | + | chr3_1:10704198-10704217 | Msa0348410:intron | 45.0% |
| TAGCCGCTATTTGACAACAC+TGG | - | chr3_1:10704336-10704355 | None:intergenic | 45.0% | |
| AGTTGAGGCTTAAAGGACCA+TGG | - | chr3_1:10704896-10704915 | None:intergenic | 45.0% | |
| TGTGTTTAGGAGGGGGAATT+GGG | - | chr3_1:10704952-10704971 | None:intergenic | 45.0% | |
| ATGTGTTTAGGAGGGGGAAT+TGG | - | chr3_1:10704953-10704972 | None:intergenic | 45.0% | |
| ACAGGAAAGGGCAAAAGGTA+TGG | - | chr3_1:10705075-10705094 | None:intergenic | 45.0% | |
| CGGGATGAATGAAACAGGAA+AGG | - | chr3_1:10705088-10705107 | None:intergenic | 45.0% | |
| ! | TGGTTCGGGATGAATGAAAC+AGG | - | chr3_1:10705093-10705112 | None:intergenic | 45.0% |
| ! | AATTTTCTGCAGCCGAGCAA+TGG | + | chr3_1:10705197-10705216 | Msa0348410:intron | 45.0% |
| ! | ATTTTCTGCAGCCGAGCAAT+GGG | + | chr3_1:10705198-10705217 | Msa0348410:intron | 45.0% |
| AACTGCTATCACCCATTGCT+CGG | - | chr3_1:10705212-10705231 | None:intergenic | 45.0% | |
| GACATGAGGGGATAGAATGA+TGG | + | chr3_1:10706002-10706021 | Msa0348410:intron | 45.0% | |
| GGCCCATGTTAGTATTATGC+TGG | - | chr3_1:10706092-10706111 | None:intergenic | 45.0% | |
| TCTAACGTGGAAATGCGCAT+GGG | - | chr3_1:10706495-10706514 | None:intergenic | 45.0% | |
| TTCTAACGTGGAAATGCGCA+TGG | - | chr3_1:10706496-10706515 | None:intergenic | 45.0% | |
| ! | TGTCATTTGGACAGAAGGCA+TGG | + | chr3_1:10706518-10706537 | Msa0348410:intron | 45.0% |
| !! | TCTTGCAAAAGTAGCGGATG+TGG | + | chr3_1:10706605-10706624 | Msa0348410:CDS | 45.0% |
| CGGATGTGGACAAAAGTCTA+GGG | + | chr3_1:10706619-10706638 | Msa0348410:CDS | 45.0% | |
| GGATGTGGACAAAAGTCTAG+GGG | + | chr3_1:10706620-10706639 | Msa0348410:CDS | 45.0% | |
| CATCCTTCTATAGCGGCTAT+CGG | + | chr3_1:10706989-10707008 | Msa0348410:intron | 45.0% | |
| CTACATGCCTTGCTAGCAAA+AGG | + | chr3_1:10707077-10707096 | Msa0348410:three_prime_UTR | 45.0% | |
| TACTAGAACTTTCCGGTGAC+CGG | + | chr3_1:10707297-10707316 | Msa0348410:three_prime_UTR | 45.0% | |
| AAAGGAGTTGTGATCCTCTC+CGG | - | chr3_1:10707319-10707338 | None:intergenic | 45.0% | |
| ! | TGTGTGATGATGCGGTTGGT+TGG | - | chr3_1:10702064-10702083 | None:intergenic | 50.0% |
| ! | GGATTGTGTGATGATGCGGT+TGG | - | chr3_1:10702068-10702087 | None:intergenic | 50.0% |
| !! | TCTGGGTATGGTTGGTTTGG+TGG | + | chr3_1:10702360-10702379 | Msa0348410:intron | 50.0% |
| AACATTACTGTCATCCGGCC+GGG | - | chr3_1:10702975-10702994 | None:intergenic | 50.0% | |
| !! | TGGTGTCGAATAGAAGTGCC+TGG | - | chr3_1:10703153-10703172 | None:intergenic | 50.0% |
| GCTGTAGCTTCAGCAGATCA+AGG | - | chr3_1:10703896-10703915 | None:intergenic | 50.0% | |
| ! | GTCTGCATTTTCTCCTTCGC+CGG | + | chr3_1:10704862-10704881 | Msa0348410:intron | 50.0% |
| ! | TCTGCATTTTCTCCTTCGCC+GGG | + | chr3_1:10704863-10704882 | Msa0348410:intron | 50.0% |
| AAGGACCATGGTTCAAACCC+CGG | - | chr3_1:10704884-10704903 | None:intergenic | 50.0% | |
| ATCGGGGAGTTGAGGCTTAA+AGG | - | chr3_1:10704903-10704922 | None:intergenic | 50.0% | |
| CTAAGGAAATCGGGGAGTTG+AGG | - | chr3_1:10704911-10704930 | None:intergenic | 50.0% | |
| TTTAGGAGGGGGAATTGGGT+AGG | - | chr3_1:10704948-10704967 | None:intergenic | 50.0% | |
| AGTACGACCTTGCAGCTTGA+AGG | - | chr3_1:10705474-10705493 | None:intergenic | 50.0% | |
| GTTCTCGCAAACGGTCTCAT+AGG | - | chr3_1:10705676-10705695 | None:intergenic | 50.0% | |
| GAGGGGATAGAATGATGGCT+TGG | + | chr3_1:10706007-10706026 | Msa0348410:intron | 50.0% | |
| ! | GGGATAGAATGATGGCTTGG+TGG | + | chr3_1:10706010-10706029 | Msa0348410:intron | 50.0% |
| !! | TAGAATGATGGCTTGGTGGC+TGG | + | chr3_1:10706014-10706033 | Msa0348410:intron | 50.0% |
| !! | AGAATGATGGCTTGGTGGCT+GGG | + | chr3_1:10706015-10706034 | Msa0348410:intron | 50.0% |
| AGCAGACTGATAAGGAGGTG+AGG | + | chr3_1:10706051-10706070 | Msa0348410:intron | 50.0% | |
| GCAGACTGATAAGGAGGTGA+GGG | + | chr3_1:10706052-10706071 | Msa0348410:intron | 50.0% | |
| GCGGATGTGGACAAAAGTCT+AGG | + | chr3_1:10706618-10706637 | Msa0348410:CDS | 50.0% | |
| GATGAAAAGTCCGCTAGCGA+TGG | + | chr3_1:10706642-10706661 | Msa0348410:CDS | 50.0% | |
| ! | AAGCCAGTGGACTTGAGCAA+CGG | + | chr3_1:10706712-10706731 | Msa0348410:CDS | 50.0% |
| CGATAGCCGCTATAGAAGGA+TGG | - | chr3_1:10706991-10707010 | None:intergenic | 50.0% | |
| GAACCGATAGCCGCTATAGA+AGG | - | chr3_1:10706995-10707014 | None:intergenic | 50.0% | |
| ! | GGTCACCGGAAAGTTCTAGT+AGG | - | chr3_1:10707298-10707317 | None:intergenic | 50.0% |
| ACATTACTGTCATCCGGCCG+GGG | - | chr3_1:10702974-10702993 | None:intergenic | 55.0% | |
| ! | TGTCTCACCGAAGTGTCCGT+TGG | + | chr3_1:10703078-10703097 | Msa0348410:CDS | 55.0% |
| ! | GTCTCACCGAAGTGTCCGTT+GGG | + | chr3_1:10703079-10703098 | Msa0348410:CDS | 55.0% |
| GAGCCCGATGCTGATCTTCA+AGG | + | chr3_1:10703356-10703375 | Msa0348410:CDS | 55.0% | |
| ! | TCTTGGTGCAACAGGCCATG+AGG | + | chr3_1:10703507-10703526 | Msa0348410:CDS | 55.0% |
| ! | CTTGGTGCAACAGGCCATGA+GGG | + | chr3_1:10703508-10703527 | Msa0348410:CDS | 55.0% |
| GGAGCAGTCTTGGGTATGCT+TGG | + | chr3_1:10704109-10704128 | Msa0348410:CDS | 55.0% | |
| ! | TGGGTATGCTTGGTGACTGC+TGG | + | chr3_1:10704119-10704138 | Msa0348410:CDS | 55.0% |
| ! | CTGCATTTTCTCCTTCGCCG+GGG | + | chr3_1:10704864-10704883 | Msa0348410:intron | 55.0% |
| ATGGGGACCTTCAAGCTGCA+AGG | + | chr3_1:10705464-10705483 | Msa0348410:CDS | 55.0% | |
| CGAAACAGGGCCTCAGTATG+TGG | + | chr3_1:10705898-10705917 | Msa0348410:intron | 55.0% | |
| !! | GAATGATGGCTTGGTGGCTG+GGG | + | chr3_1:10706016-10706035 | Msa0348410:intron | 55.0% |
| GACAAGGTTGGGCAGCTTCT+TGG | + | chr3_1:10706134-10706153 | Msa0348410:intron | 55.0% | |
| CTACGGGTGCCTCTGATTAG+TGG | - | chr3_1:10706340-10706359 | None:intergenic | 55.0% | |
| AACGTGGAAATGCGCATGGG+TGG | - | chr3_1:10706492-10706511 | None:intergenic | 55.0% | |
| ! | AGCCAGTGGACTTGAGCAAC+GGG | + | chr3_1:10706713-10706732 | Msa0348410:CDS | 55.0% |
| TACCCGTTGCTCAAGTCCAC+TGG | - | chr3_1:10706718-10706737 | None:intergenic | 55.0% | |
| TTGTGATCCTCTCCGGTCAC+CGG | - | chr3_1:10707312-10707331 | None:intergenic | 55.0% | |
| CATGGTTCAAACCCCGGCGA+AGG | - | chr3_1:10704878-10704897 | None:intergenic | 60.0% | |
| CTTCGCCGGGGTTTGAACCA+TGG | + | chr3_1:10704876-10704895 | Msa0348410:intron | 60.0% | |
| GAACTTTCCGGTGACCGGAG+AGG | + | chr3_1:10707302-10707321 | Msa0348410:three_prime_UTR | 60.0% | |
| !! | TGATGGCTTGGTGGCTGGGG+TGG | + | chr3_1:10706019-10706038 | Msa0348410:intron | 65.0% |
| !! | GATGGCTTGGTGGCTGGGGT+GGG | + | chr3_1:10706020-10706039 | Msa0348410:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 10702056 | 10707692 | 10702056 | ID=Msa0348410;Name=Msa0348410 |
| chr3_1 | mRNA | 10702056 | 10707692 | 10702056 | ID=Msa0348410-mRNA-1;Parent=Msa0348410;Name=Msa0348410-mRNA-1;_AED=0.08;_eAED=0.08;_QI=152|1|1|1|0.75|0.55|9|598|366 |
| chr3_1 | exon | 10702056 | 10702185 | 10702056 | ID=Msa0348410-mRNA-1:exon:2890;Parent=Msa0348410-mRNA-1 |
| chr3_1 | exon | 10702919 | 10703206 | 10702919 | ID=Msa0348410-mRNA-1:exon:2891;Parent=Msa0348410-mRNA-1 |
| chr3_1 | exon | 10703298 | 10703529 | 10703298 | ID=Msa0348410-mRNA-1:exon:2892;Parent=Msa0348410-mRNA-1 |
| chr3_1 | exon | 10703995 | 10704140 | 10703995 | ID=Msa0348410-mRNA-1:exon:2893;Parent=Msa0348410-mRNA-1 |
| chr3_1 | exon | 10705209 | 10705296 | 10705209 | ID=Msa0348410-mRNA-1:exon:2894;Parent=Msa0348410-mRNA-1 |
| chr3_1 | exon | 10705409 | 10705555 | 10705409 | ID=Msa0348410-mRNA-1:exon:2895;Parent=Msa0348410-mRNA-1 |
| chr3_1 | exon | 10706585 | 10706734 | 10706585 | ID=Msa0348410-mRNA-1:exon:2896;Parent=Msa0348410-mRNA-1 |
| chr3_1 | exon | 10707002 | 10707613 | 10707002 | ID=Msa0348410-mRNA-1:exon:2897;Parent=Msa0348410-mRNA-1 |
| chr3_1 | exon | 10707635 | 10707692 | 10707635 | ID=Msa0348410-mRNA-1:exon:2898;Parent=Msa0348410-mRNA-1 |
| chr3_1 | five_prime_UTR | 10702056 | 10702185 | 10702056 | ID=Msa0348410-mRNA-1:five_prime_utr;Parent=Msa0348410-mRNA-1 |
| chr3_1 | five_prime_UTR | 10702919 | 10702940 | 10702919 | ID=Msa0348410-mRNA-1:five_prime_utr;Parent=Msa0348410-mRNA-1 |
| chr3_1 | CDS | 10702941 | 10703206 | 10702941 | ID=Msa0348410-mRNA-1:cds;Parent=Msa0348410-mRNA-1 |
| chr3_1 | CDS | 10703298 | 10703529 | 10703298 | ID=Msa0348410-mRNA-1:cds;Parent=Msa0348410-mRNA-1 |
| chr3_1 | CDS | 10703995 | 10704140 | 10703995 | ID=Msa0348410-mRNA-1:cds;Parent=Msa0348410-mRNA-1 |
| chr3_1 | CDS | 10705209 | 10705296 | 10705209 | ID=Msa0348410-mRNA-1:cds;Parent=Msa0348410-mRNA-1 |
| chr3_1 | CDS | 10705409 | 10705555 | 10705409 | ID=Msa0348410-mRNA-1:cds;Parent=Msa0348410-mRNA-1 |
| chr3_1 | CDS | 10706585 | 10706734 | 10706585 | ID=Msa0348410-mRNA-1:cds;Parent=Msa0348410-mRNA-1 |
| chr3_1 | CDS | 10707002 | 10707073 | 10707002 | ID=Msa0348410-mRNA-1:cds;Parent=Msa0348410-mRNA-1 |
| chr3_1 | three_prime_UTR | 10707074 | 10707613 | 10707074 | ID=Msa0348410-mRNA-1:three_prime_utr;Parent=Msa0348410-mRNA-1 |
| chr3_1 | three_prime_UTR | 10707635 | 10707692 | 10707635 | ID=Msa0348410-mRNA-1:three_prime_utr;Parent=Msa0348410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
