AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1228330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1228330 MtrunA17_Chr8g0335161 96.802 469 15 0 1 469 1 469 0.0 930
Msa1228330 MtrunA17_Chr8g0335141 85.288 469 68 1 1 469 4 471 0.0 825
Msa1228330 MtrunA17_Chr6g0459311 75.372 471 110 4 1 469 8 474 0.0 723
Msa1228330 MtrunA17_Chr6g0486251 73.876 467 116 4 1 465 1 463 0.0 701
Msa1228330 MtrunA17_Chr6g0486201 73.876 467 116 4 1 465 1 463 0.0 701
Msa1228330 MtrunA17_Chr8g0361371 59.197 473 176 9 3 465 4 469 0.0 538
Msa1228330 MtrunA17_Chr8g0334831 56.612 484 184 10 1 465 1 477 0.0 514
Msa1228330 MtrunA17_Chr7g0232341 46.526 475 240 9 1 468 1 468 8.18e-143 417
Msa1228330 MtrunA17_Chr7g0232311 48.608 467 227 9 1 462 1 459 3.05e-141 413
Msa1228330 MtrunA17_Chr7g0232391 46.947 475 239 8 1 469 1 468 5.19e-141 412
Msa1228330 MtrunA17_Chr7g0232401 47.059 476 233 11 1 466 1 467 3.16e-140 410
Msa1228330 MtrunA17_Chr7g0232411 45.895 475 244 8 1 469 1 468 3.30e-138 405
Msa1228330 MtrunA17_Chr7g0232331 45.148 474 246 9 1 467 1 467 4.42e-137 402
Msa1228330 MtrunA17_Chr8g0336741 45.648 471 244 8 4 469 11 474 9.05e-136 399
Msa1228330 MtrunA17_Chr8g0336731 46.352 466 238 8 9 469 35 493 1.11e-133 395
Msa1228330 MtrunA17_Chr8g0347281 46.220 463 235 10 7 465 19 471 2.91e-133 393
Msa1228330 MtrunA17_Chr1g0153451 44.726 474 249 9 1 469 1 466 1.87e-132 391
Msa1228330 MtrunA17_Chr7g0275511 45.416 469 242 10 7 468 16 477 1.10e-131 389
Msa1228330 MtrunA17_Chr8g0373301 45.263 475 235 12 5 468 8 468 8.33e-131 387
Msa1228330 MtrunA17_Chr8g0336651 47.257 474 238 8 1 469 1 467 4.35e-130 406
Msa1228330 MtrunA17_Chr8g0336651 46.218 476 240 10 3 469 778 1246 4.93e-130 406
Msa1228330 MtrunA17_Chr8g0336651 42.560 336 145 5 137 469 487 777 3.27e-72 248
Msa1228330 MtrunA17_Chr8g0336691 47.059 476 238 9 1 469 8 476 5.85e-130 408
Msa1228330 MtrunA17_Chr8g0336691 44.937 474 247 9 3 469 916 1382 1.37e-121 385
Msa1228330 MtrunA17_Chr8g0336691 42.797 472 232 9 3 469 477 915 9.01e-113 362
Msa1228330 MtrunA17_Chr8g0347271 44.708 463 242 10 7 465 20 472 6.73e-130 384
Msa1228330 MtrunA17_Chr6g0449931 45.397 478 244 11 1 469 1 470 9.13e-127 376
Msa1228330 MtrunA17_Chr8g0339451 44.492 472 245 8 9 469 1 466 3.70e-125 372
Msa1228330 MtrunA17_Chr8g0339461 43.154 482 253 9 1 469 1 474 9.13e-123 366
Msa1228330 MtrunA17_Chr8g0334851 44.259 479 242 12 1 465 1 468 1.16e-121 363
Msa1228330 MtrunA17_Chr8g0334861 42.616 474 251 12 1 465 1 462 1.82e-121 363
Msa1228330 MtrunA17_Chr8g0339631 43.125 480 253 10 1 469 1 471 6.48e-118 354
Msa1228330 MtrunA17_Chr8g0339441 41.754 479 222 9 1 469 1 432 1.54e-111 336
Msa1228330 MtrunA17_Chr8g0339601 50.592 338 154 6 140 469 1 333 7.58e-110 328
Msa1228330 MtrunA17_Chr7g0232351 46.094 384 196 7 1 379 1 378 4.16e-106 320
Msa1228330 MtrunA17_Chr8g0370941 37.449 494 267 13 1 463 3 485 3.91e-95 296
Msa1228330 MtrunA17_Chr5g0403641 34.959 492 259 14 1 468 54 508 2.32e-87 276
Msa1228330 MtrunA17_Chr3g0079731 35.625 480 287 8 1 462 1 476 1.64e-85 271
Msa1228330 MtrunA17_Chr1g0153461 58.411 214 87 2 257 469 3 215 9.71e-83 254
Msa1228330 MtrunA17_Chr6g0462531 35.197 483 267 12 4 463 2 461 1.01e-79 255
Msa1228330 MtrunA17_Chr6g0462521 33.263 472 277 9 4 463 2 447 1.33e-79 254
Msa1228330 MtrunA17_Chr6g0462551 34.447 479 276 11 4 463 2 461 4.35e-78 251
Msa1228330 MtrunA17_Chr6g0462541 33.333 474 281 11 7 463 5 460 5.91e-73 238
Msa1228330 MtrunA17_Chr5g0442541 31.458 480 289 16 3 462 2 461 7.22e-71 232
Msa1228330 MtrunA17_Chr5g0442581 32.860 493 276 14 3 462 2 472 7.82e-70 231
Msa1228330 MtrunA17_Chr5g0429681 33.262 469 267 16 1 447 39 483 1.29e-69 229
Msa1228330 MtrunA17_Chr5g0442491 32.225 481 293 12 3 462 2 470 2.35e-69 228
Msa1228330 MtrunA17_Chr5g0448521 31.315 479 293 15 3 462 2 463 2.42e-69 228
Msa1228330 MtrunA17_Chr6g0462571 30.802 474 297 10 4 463 2 458 2.44e-69 228
Msa1228330 MtrunA17_Chr5g0442561 31.504 492 292 16 3 468 2 474 8.32e-68 224
Msa1228330 MtrunA17_Chr2g0302991 32.305 486 280 16 4 466 3 462 1.40e-66 221
Msa1228330 MtrunA17_Chr5g0429711 32.099 486 272 18 1 462 6 457 1.10e-65 218
Msa1228330 MtrunA17_Chr2g0302961 31.211 487 287 14 4 466 3 465 1.53e-65 218
Msa1228330 MtrunA17_Chr5g0442521 30.849 483 298 14 3 462 2 471 2.35e-64 215
Msa1228330 MtrunA17_Chr5g0442601 30.453 486 297 14 3 462 401 871 1.50e-61 215
Msa1228330 MtrunA17_Chr5g0442601 31.714 350 199 8 61 402 16 333 4.10e-41 157
Msa1228330 MtrunA17_Chr4g0044511 32.172 488 281 16 2 462 36 500 2.29e-58 200
Msa1228330 MtrunA17_Chr8g0366391 30.081 492 296 12 6 469 9 480 5.19e-57 196
Msa1228330 MtrunA17_Chr5g0442511 28.931 477 289 13 3 462 46 489 3.86e-56 194
Msa1228330 MtrunA17_Chr5g0426431 32.996 494 264 21 5 462 11 473 4.79e-56 193
Msa1228330 MtrunA17_Chr3g0092641 31.263 499 264 21 6 462 12 473 2.22e-53 186
Msa1228330 MtrunA17_Chr5g0420801 31.148 488 283 16 2 467 3 459 1.45e-52 184
Msa1228330 MtrunA17_Chr4g0053501 29.810 473 299 14 7 466 12 464 7.41e-52 182
Msa1228330 MtrunA17_Chr3g0078841 29.741 501 265 20 2 455 6 466 1.37e-51 181
Msa1228330 MtrunA17_Chr3g0112771 30.947 475 277 16 3 462 9 447 1.52e-51 181
Msa1228330 MtrunA17_Chr7g0265041 31.828 487 275 16 6 455 11 477 1.93e-51 181
Msa1228330 MtrunA17_Chr7g0265141 28.980 490 288 15 4 455 7 474 7.66e-51 179
Msa1228330 MtrunA17_Chr7g0265051 29.532 491 293 14 4 460 7 478 8.46e-51 180
Msa1228330 MtrunA17_Chr8g0369341 32.158 482 286 16 2 462 3 464 9.02e-51 179
Msa1228330 MtrunA17_Chr7g0265151 28.398 493 269 19 12 456 17 473 5.23e-50 177
Msa1228330 MtrunA17_Chr7g0243871 38.163 283 150 7 191 459 194 465 8.69e-50 177
Msa1228330 MtrunA17_Chr4g0044521 36.013 311 165 9 177 462 161 462 1.10e-49 176
Msa1228330 MtrunA17_Chr7g0265101 29.352 494 292 15 4 460 7 480 2.57e-49 176
Msa1228330 MtrunA17_Chr4g0066151 36.691 278 142 10 210 462 207 475 2.91e-49 175
Msa1228330 MtrunA17_Chr7g0275681 30.533 488 281 16 1 455 7 469 6.69e-49 174
Msa1228330 MtrunA17_Chr4g0066281 38.376 271 141 8 211 462 199 462 1.03e-48 174
Msa1228330 MtrunA17_Chr4g0066221 27.789 493 303 15 1 462 6 476 1.22e-48 174
Msa1228330 MtrunA17_Chr4g0044501 32.057 418 235 13 70 466 86 475 1.24e-48 174
Msa1228330 MtrunA17_Chr4g0042891 32.225 481 262 21 6 460 7 449 1.90e-48 172
Msa1228330 MtrunA17_Chr6g0454341 28.600 500 286 19 2 462 6 473 3.16e-48 172
Msa1228330 MtrunA17_Chr7g0243771 29.980 497 287 18 1 462 1 471 3.62e-48 172
Msa1228330 MtrunA17_Chr8g0374901 30.328 488 282 19 7 462 13 474 3.99e-48 172
Msa1228330 MtrunA17_Chr5g0414331 27.629 485 295 12 2 468 9 455 6.50e-48 171
Msa1228330 MtrunA17_Chr2g0278711 30.691 492 282 20 3 462 8 472 9.77e-48 171
Msa1228330 MtrunA17_Chr7g0243781 38.433 268 138 7 211 462 215 471 1.17e-47 171
Msa1228330 MtrunA17_Chr3g0079711 48.663 187 83 3 284 462 3 184 1.40e-47 162
Msa1228330 MtrunA17_Chr2g0329111 29.522 481 260 17 1 440 1 443 1.55e-47 171
Msa1228330 MtrunA17_Chr4g0042931 31.557 488 280 19 6 468 7 465 2.06e-47 170
Msa1228330 MtrunA17_Chr7g0217881 32.836 335 187 10 147 462 142 457 2.37e-47 169
Msa1228330 MtrunA17_Chr5g0440421 29.184 490 294 14 3 456 7 479 2.88e-47 170
Msa1228330 MtrunA17_Chr5g0414321 27.479 484 297 12 2 468 7 453 3.20e-47 169
Msa1228330 MtrunA17_Chr6g0454401 28.486 502 287 17 2 462 6 476 3.56e-47 169
Msa1228330 MtrunA17_Chr4g0014061 35.000 280 149 5 211 468 206 474 3.67e-47 169
Msa1228330 MtrunA17_Chr6g0464881 26.915 483 286 14 2 459 7 447 3.86e-47 169
Msa1228330 MtrunA17_Chr5g0426401 35.890 326 163 15 161 468 12 309 4.36e-47 165
Msa1228330 MtrunA17_Chr8g0377921 28.600 493 277 15 7 462 5 459 7.72e-47 168
Msa1228330 MtrunA17_Chr6g0464921 34.586 266 146 5 205 459 200 448 8.29e-47 168
Msa1228330 MtrunA17_Chr8g0359821 29.006 493 291 15 3 462 7 473 9.51e-47 168
Msa1228330 MtrunA17_Chr6g0463861 34.021 291 162 9 197 462 184 469 1.46e-46 168
Msa1228330 MtrunA17_Chr3g0118671 27.495 491 305 15 1 462 1 469 1.65e-46 167
Msa1228330 MtrunA17_Chr6g0454261 32.095 377 212 14 106 462 123 475 1.73e-46 167
Msa1228330 MtrunA17_Chr8g0374971 35.395 291 158 8 197 462 191 476 2.04e-46 167
Msa1228330 MtrunA17_Chr4g0050341 28.543 508 284 18 4 466 17 490 3.75e-46 167
Msa1228330 MtrunA17_Chr1g0179901 30.060 499 268 23 6 455 16 482 6.78e-46 166
Msa1228330 MtrunA17_Chr7g0243801 29.735 491 284 18 7 462 8 472 7.31e-46 166
Msa1228330 MtrunA17_Chr4g0032331 30.126 478 277 16 4 462 6 445 9.07e-46 165
Msa1228330 MtrunA17_Chr6g0454151 36.393 305 159 13 171 462 191 473 1.20e-45 165
Msa1228330 MtrunA17_Chr4g0053321 36.704 267 146 10 199 455 215 468 1.53e-45 166
Msa1228330 MtrunA17_Chr7g0218811 31.429 420 228 15 62 462 67 445 1.57e-45 164
Msa1228330 MtrunA17_Chr6g0464841 29.713 488 279 20 4 466 6 454 2.27e-45 164
Msa1228330 MtrunA17_Chr6g0464871 29.124 491 286 18 3 469 17 469 3.14e-45 164
Msa1228330 MtrunA17_Chr6g0453951 29.039 489 286 19 2 455 53 515 3.60e-45 165
Msa1228330 MtrunA17_Chr6g0454201 34.228 298 163 10 171 455 192 469 5.11e-45 164
Msa1228330 MtrunA17_Chr6g0454271 34.237 295 154 9 178 455 4 275 5.22e-45 159
Msa1228330 MtrunA17_Chr8g0367221 29.039 458 287 11 3 443 1285 1721 8.26e-45 168
Msa1228330 MtrunA17_Chr8g0367221 28.384 458 290 13 3 443 795 1231 5.27e-42 160
Msa1228330 MtrunA17_Chr8g0367221 27.729 458 292 11 3 443 9 444 5.80e-39 151
Msa1228330 MtrunA17_Chr7g0249981 27.789 493 281 17 4 468 23 468 1.18e-44 163
Msa1228330 MtrunA17_Chr7g0249961 36.400 250 129 6 231 468 30 261 1.67e-44 157
Msa1228330 MtrunA17_Chr6g0449991 34.795 342 189 12 1 333 1 317 1.95e-44 158
Msa1228330 MtrunA17_Chr3g0112761 28.661 478 294 14 3 466 5 449 2.27e-44 161
Msa1228330 MtrunA17_Chr2g0278721 29.130 460 286 14 2 441 513 952 2.73e-44 166
Msa1228330 MtrunA17_Chr2g0278721 28.009 457 286 13 2 441 11 441 7.65e-38 147
Msa1228330 MtrunA17_Chr7g0243681 28.600 493 288 17 6 462 11 475 3.00e-44 162
Msa1228330 MtrunA17_Chr6g0454301 27.642 492 301 16 2 462 259 726 3.22e-44 165
Msa1228330 MtrunA17_Chr6g0454301 34.167 240 130 6 234 462 3 225 3.38e-35 139
Msa1228330 MtrunA17_Chr6g0454141 32.361 377 211 15 106 462 123 475 3.54e-44 161
Msa1228330 MtrunA17_Chr6g0454191 29.006 493 282 18 2 455 6 469 3.64e-44 161
Msa1228330 MtrunA17_Chr8g0337381 58.779 131 51 2 339 469 1 128 5.50e-44 150
Msa1228330 MtrunA17_Chr6g0463851 32.899 307 179 10 185 469 184 485 7.27e-44 160
Msa1228330 MtrunA17_Chr1g0173121 34.528 307 183 8 164 462 162 458 7.55e-44 160
Msa1228330 MtrunA17_Chr4g0060511 36.727 275 140 6 211 462 220 483 9.26e-44 160
Msa1228330 MtrunA17_Chr6g0454121 33.882 304 170 9 171 462 190 474 1.59e-43 159
Msa1228330 MtrunA17_Chr7g0243631 29.091 495 276 19 11 462 20 482 3.10e-43 159
Msa1228330 MtrunA17_Chr8g0336331 28.257 499 288 19 2 462 6 472 4.00e-43 158
Msa1228330 MtrunA17_Chr8g0374941 36.462 277 142 10 211 462 1146 1413 4.17e-43 163
Msa1228330 MtrunA17_Chr8g0374941 34.211 266 141 10 211 451 208 464 6.08e-40 154
Msa1228330 MtrunA17_Chr8g0374941 36.293 259 139 8 211 448 673 926 6.68e-40 154
Msa1228330 MtrunA17_Chr6g0454211 31.250 368 213 11 106 455 410 755 5.41e-43 162
Msa1228330 MtrunA17_Chr6g0454211 30.603 232 102 11 160 379 52 236 3.53e-21 97.1
Msa1228330 MtrunA17_Chr7g0243931 28.175 504 289 14 2 462 13 486 5.64e-43 158
Msa1228330 MtrunA17_Chr4g0066201 32.026 306 180 9 178 462 172 470 5.65e-43 158
Msa1228330 MtrunA17_Chr4g0011051 29.051 506 277 19 1 456 4 477 7.91e-43 158
Msa1228330 MtrunA17_Chr8g0350881 36.630 273 147 8 211 462 209 476 1.03e-42 157
Msa1228330 MtrunA17_Chr3g0118691 26.939 490 309 14 1 462 10 478 1.10e-42 157
Msa1228330 MtrunA17_Chr4g0066131 33.577 274 156 8 210 462 202 470 1.28e-42 157
Msa1228330 MtrunA17_Chr6g0454321 31.143 350 197 14 122 449 133 460 1.29e-42 160
Msa1228330 MtrunA17_Chr3g0121991 28.958 518 288 25 5 461 42 540 1.30e-42 158
Msa1228330 MtrunA17_Chr8g0361411 28.866 485 288 19 4 467 6 454 1.63e-42 156
Msa1228330 MtrunA17_Chr6g0454131 34.539 304 168 11 171 462 190 474 2.31e-42 156
Msa1228330 MtrunA17_Chr7g0218311 35.662 272 151 7 210 462 213 479 2.43e-42 156
Msa1228330 MtrunA17_Chr7g0218831 28.000 450 274 14 6 442 6 418 2.43e-42 155
Msa1228330 MtrunA17_Chr6g0482061 28.025 471 292 17 5 446 10 462 3.03e-42 156
Msa1228330 MtrunA17_Chr3g0118701 27.347 490 307 15 1 462 10 478 3.19e-42 156
Msa1228330 MtrunA17_Chr4g0066171 32.353 306 179 10 178 462 174 472 3.42e-42 156
Msa1228330 MtrunA17_Chr5g0431441 29.046 482 279 16 6 462 18 461 3.43e-42 155
Msa1228330 MtrunA17_Chr6g0454291 34.007 297 165 10 171 455 188 465 3.66e-42 155
Msa1228330 MtrunA17_Chr7g0243951 26.653 499 302 12 2 462 7 479 4.03e-42 156
Msa1228330 MtrunA17_Chr1g0159551 32.990 291 181 6 179 462 172 455 4.75e-42 155
Msa1228330 MtrunA17_Chr4g0066261 32.899 307 179 10 178 462 176 477 5.38e-42 155
Msa1228330 MtrunA17_Chr1g0207981 33.010 309 180 9 162 459 173 465 7.43e-42 155
Msa1228330 MtrunA17_Chr5g0412111 30.939 362 217 11 114 462 116 457 7.46e-42 155
Msa1228330 MtrunA17_Chr3g0118771 26.547 501 309 17 2 468 17 492 9.14e-42 155
Msa1228330 MtrunA17_Chr8g0377941 27.941 476 291 15 7 459 8 454 1.19e-41 154
Msa1228330 MtrunA17_Chr5g0419771 35.581 267 140 8 211 455 245 501 1.63e-41 155
Msa1228330 MtrunA17_Chr7g0218821 29.737 380 218 13 92 459 101 443 1.94e-41 153
Msa1228330 MtrunA17_Chr2g0294941 31.492 362 204 15 121 457 28 370 2.06e-41 151
Msa1228330 MtrunA17_Chr5g0431361 27.869 488 279 19 2 462 8 449 2.23e-41 153
Msa1228330 MtrunA17_Chr5g0419761 27.856 499 298 18 3 462 6 481 2.48e-41 154
Msa1228330 MtrunA17_Chr7g0218791 28.184 479 260 18 10 455 9 436 4.80e-41 152
Msa1228330 MtrunA17_Chr6g0464861 35.055 271 143 8 209 466 203 453 6.57e-41 152
Msa1228330 MtrunA17_Chr5g0401721 29.912 341 201 12 136 462 150 466 7.77e-41 152
Msa1228330 MtrunA17_Chr6g0454331 32.323 297 171 7 178 462 196 474 8.20e-41 152
Msa1228330 MtrunA17_Chr3g0118721 32.667 300 165 10 180 462 6 285 9.84e-41 147
Msa1228330 MtrunA17_Chr8g0355221 27.160 486 301 14 16 469 25 489 9.90e-41 152
Msa1228330 MtrunA17_Chr4g0044481 36.404 228 124 4 211 429 209 424 9.98e-41 150
Msa1228330 MtrunA17_Chr5g0423981 32.566 304 174 10 171 462 156 440 1.01e-40 151
Msa1228330 MtrunA17_Chr6g0454181 31.987 297 171 10 171 455 191 468 1.18e-40 152
Msa1228330 MtrunA17_Chr3g0118661 29.185 466 254 18 2 426 9 439 1.33e-40 152
Msa1228330 MtrunA17_Chr6g0453961 31.212 330 184 10 145 462 187 485 1.35e-40 152
Msa1228330 MtrunA17_Chr7g0235051 35.793 271 141 6 211 459 187 446 1.52e-40 151
Msa1228330 MtrunA17_Chr2g0294921 35.662 272 150 8 211 462 360 626 2.19e-40 153
Msa1228330 MtrunA17_Chr2g0294931 35.662 272 150 8 211 462 211 477 3.63e-40 150
Msa1228330 MtrunA17_Chr2g0278741 28.884 457 282 14 2 441 93 523 3.67e-40 151
Msa1228330 MtrunA17_Chr5g0412101 29.275 386 226 12 99 462 106 466 4.83e-40 150
Msa1228330 MtrunA17_Chr1g0207861 34.875 281 158 7 200 468 203 470 4.90e-40 150
Msa1228330 MtrunA17_Chr8g0365811 35.036 274 159 9 200 462 688 953 5.25e-40 154
Msa1228330 MtrunA17_Chr8g0365811 31.949 313 188 9 130 431 142 440 3.88e-38 148
Msa1228330 MtrunA17_Chr5g0428081 27.027 481 309 14 7 462 12 475 6.24e-40 150
Msa1228330 MtrunA17_Chr1g0161351 30.867 392 239 12 83 462 122 493 7.89e-40 150
Msa1228330 MtrunA17_Chr4g0069611 29.890 455 273 15 3 441 12 436 7.97e-40 149
Msa1228330 MtrunA17_Chr3g0122001 31.217 378 217 15 111 462 109 469 8.18e-40 153
Msa1228330 MtrunA17_Chr3g0122001 32.011 378 213 16 111 462 589 948 9.50e-40 153
Msa1228330 MtrunA17_Chr8g0334841 49.315 146 70 3 171 314 1 144 8.35e-40 141
Msa1228330 MtrunA17_Chr8g0382021 30.676 414 243 12 59 462 105 484 8.82e-40 149
Msa1228330 MtrunA17_Chr7g0218841 28.139 462 259 19 6 442 6 419 1.13e-39 148
Msa1228330 MtrunA17_Chr3g0118711 27.419 496 295 18 3 462 10 476 1.18e-39 149
Msa1228330 MtrunA17_Chr8g0380531 27.443 481 296 15 6 466 10 457 1.45e-39 148
Msa1228330 MtrunA17_Chr1g0207951 34.363 259 141 7 214 462 865 1104 1.50e-39 152
Msa1228330 MtrunA17_Chr1g0207951 31.481 270 153 6 204 462 318 566 1.84e-37 146
Msa1228330 MtrunA17_Chr1g0207931 29.863 365 199 12 136 462 148 493 3.86e-39 148
Msa1228330 MtrunA17_Chr7g0243711 40.092 217 108 4 257 462 107 312 3.90e-39 144
Msa1228330 MtrunA17_Chr7g0249931 27.743 483 280 19 3 459 37 476 4.64e-39 147
Msa1228330 MtrunA17_Chr3g0098111 32.616 279 167 6 200 468 204 471 4.74e-39 147
Msa1228330 MtrunA17_Chr6g0454361 31.908 304 176 9 171 462 192 476 7.77e-39 147
Msa1228330 MtrunA17_Chr5g0412131 26.875 480 302 15 6 462 12 465 8.46e-39 146
Msa1228330 MtrunA17_Chr7g0243851 35.740 277 140 8 211 462 175 438 9.92e-39 146
Msa1228330 MtrunA17_Chr6g0452771 32.566 304 174 8 171 462 191 475 1.18e-38 146
Msa1228330 MtrunA17_Chr1g0207971 29.213 356 209 13 122 462 122 449 1.21e-38 145
Msa1228330 MtrunA17_Chr4g0072761 34.397 282 162 7 182 462 189 448 1.57e-38 145
Msa1228330 MtrunA17_Chr4g0029131 27.556 450 289 12 1 440 7 429 2.92e-38 147
Msa1228330 MtrunA17_Chr6g0454221 35.043 234 123 7 234 455 3 219 3.19e-38 141
Msa1228330 MtrunA17_Chr7g0250001 27.088 491 295 19 1 469 1 450 3.36e-38 144
Msa1228330 MtrunA17_Chr3g0106251 31.469 286 163 8 179 455 21 282 1.12e-37 140
Msa1228330 MtrunA17_Chr7g0243861 36.594 276 139 7 211 462 220 483 1.66e-37 143
Msa1228330 MtrunA17_Chr1g0165701 37.391 230 122 4 250 469 269 486 2.23e-37 143
Msa1228330 MtrunA17_Chr8g0374931 34.717 265 148 9 211 455 211 470 2.43e-37 142
Msa1228330 MtrunA17_Chr5g0401851 32.258 279 159 5 211 468 216 485 3.08e-37 142
Msa1228330 MtrunA17_Chr4g0072771 32.281 285 172 5 178 462 198 461 1.23e-36 140
Msa1228330 MtrunA17_Chr7g0243761 26.923 494 270 17 6 445 11 467 1.47e-36 140
Msa1228330 MtrunA17_Chr5g0416741 26.884 491 307 13 7 466 14 483 1.48e-36 140
Msa1228330 MtrunA17_Chr7g0241781 27.253 455 261 14 3 442 6 405 2.15e-36 139
Msa1228330 MtrunA17_Chr7g0243811 39.594 197 103 4 211 402 190 375 3.23e-36 137
Msa1228330 MtrunA17_Chr7g0243911 41.500 200 93 5 258 446 22 208 5.66e-36 132
Msa1228330 MtrunA17_Chr3g0106231 25.949 474 278 15 5 455 17 440 7.64e-36 138
Msa1228330 MtrunA17_Chr5g0431401 25.988 481 286 18 6 462 10 444 1.30e-35 137
Msa1228330 MtrunA17_Chr5g0410941 31.183 279 167 7 211 469 219 492 1.89e-35 137
Msa1228330 MtrunA17_Chr3g0118751 25.646 503 284 15 1 468 1 448 2.23e-35 136
Msa1228330 MtrunA17_Chr7g0265111 37.327 217 113 5 258 462 306 511 3.65e-35 137
Msa1228330 MtrunA17_Chr5g0432731 30.605 281 167 6 191 462 31 292 6.37e-35 132
Msa1228330 MtrunA17_Chr7g0241801 27.253 455 261 14 3 442 6 405 1.06e-34 134
Msa1228330 MtrunA17_Chr6g0466831 27.837 467 285 15 3 451 15 447 1.25e-34 135
Msa1228330 MtrunA17_Chr6g0454171 31.159 276 143 8 201 462 63 305 1.40e-34 131
Msa1228330 MtrunA17_Chr5g0409591 33.824 272 151 7 211 462 212 474 1.43e-34 135
Msa1228330 MtrunA17_Chr5g0393591 32.400 250 128 7 213 462 223 431 1.50e-34 134
Msa1228330 MtrunA17_Chr7g0243611 36.327 245 121 8 196 419 66 296 1.79e-34 130
Msa1228330 MtrunA17_Chr4g0029151 25.336 446 304 9 1 440 15 437 2.09e-34 134
Msa1228330 MtrunA17_Chr6g0454351 29.022 317 174 10 161 462 180 460 2.49e-34 134
Msa1228330 MtrunA17_Chr1g0207831 31.071 280 158 7 197 462 201 459 5.58e-34 133
Msa1228330 MtrunA17_Chr5g0431421 25.786 477 292 18 6 462 10 444 1.28e-33 132
Msa1228330 MtrunA17_Chr8g0336321 27.214 463 279 13 6 440 7 439 1.99e-33 131
Msa1228330 MtrunA17_Chr6g0464091 27.646 463 284 15 2 442 14 447 2.88e-33 131
Msa1228330 MtrunA17_Chr2g0307961 29.474 380 211 11 111 466 122 468 4.77e-33 130
Msa1228330 MtrunA17_Chr8g0355011 30.029 343 180 11 106 441 47 336 8.82e-33 127
Msa1228330 MtrunA17_Chr8g0336251 27.056 462 281 13 6 440 7 439 2.80e-32 128
Msa1228330 MtrunA17_Chr6g0466841 26.767 467 290 15 3 451 15 447 3.36e-32 128
Msa1228330 MtrunA17_Chr6g0463891 35.683 227 121 5 244 459 265 477 3.99e-32 128
Msa1228330 MtrunA17_Chr5g0427571 34.400 250 136 6 213 449 46 280 5.76e-32 124
Msa1228330 MtrunA17_Chr5g0431371 25.261 479 292 17 6 462 10 444 1.22e-31 126
Msa1228330 MtrunA17_Chr5g0442501 28.115 313 207 8 3 306 2 305 1.82e-31 123
Msa1228330 MtrunA17_Chr1g0196851 26.452 465 276 12 2 440 45 469 5.35e-31 125
Msa1228330 MtrunA17_Chr4g0039881 33.610 241 140 5 207 441 187 413 6.91e-31 124
Msa1228330 MtrunA17_Chr2g0302851 24.896 482 266 15 2 442 12 438 3.13e-30 122
Msa1228330 MtrunA17_Chr4g0040691 25.282 443 299 13 6 439 8 427 6.94e-30 121
Msa1228330 MtrunA17_Chr6g0454371 33.889 180 102 4 283 462 4 166 1.09e-29 114
Msa1228330 MtrunA17_Chr3g0092031 36.264 182 102 3 260 441 6 173 1.28e-29 114
Msa1228330 MtrunA17_Chr5g0448551 24.831 443 287 15 3 426 4 419 6.47e-29 118
Msa1228330 MtrunA17_Chr6g0454251 33.023 215 119 6 178 380 194 395 7.30e-29 117
Msa1228330 MtrunA17_Chr5g0416821 32.734 278 140 8 211 466 221 473 1.11e-28 118
Msa1228330 MtrunA17_Chr4g0066141 37.821 156 86 3 318 462 192 347 4.18e-28 114
Msa1228330 MtrunA17_Chr2g0283041 30.045 223 144 3 210 432 210 420 2.29e-27 114
Msa1228330 MtrunA17_Chr8g0357361 39.041 146 76 2 257 402 117 249 9.26e-27 108
Msa1228330 MtrunA17_Chr3g0079721 28.621 290 188 7 4 278 3 288 1.25e-26 108
Msa1228330 MtrunA17_Chr4g0040711 24.208 442 305 11 6 439 8 427 3.32e-26 110
Msa1228330 MtrunA17_Chr4g0029161 25.778 450 269 14 1 440 7 401 1.43e-25 108
Msa1228330 MtrunA17_Chr5g0431431 29.961 257 146 7 171 422 116 343 4.31e-25 106
Msa1228330 MtrunA17_Chr8g0336261 35.333 150 80 4 280 429 1 133 6.44e-25 99.8
Msa1228330 MtrunA17_Chr7g0231631 31.273 275 142 7 209 462 7 255 6.85e-25 103
Msa1228330 MtrunA17_Chr6g0454231 26.275 255 127 6 209 455 5 206 8.47e-23 100
Msa1228330 MtrunA17_Chr2g0319801 24.612 451 300 13 6 443 8 431 1.47e-21 97.1
Msa1228330 MtrunA17_Chr2g0319761 23.991 446 309 11 6 441 8 433 5.97e-21 95.1
Msa1228330 MtrunA17_Chr5g0442551 26.246 301 183 11 61 349 21 294 8.77e-21 92.4
Msa1228330 MtrunA17_Chr1g0207881 35.099 151 88 4 315 462 237 380 1.06e-20 94.0
Msa1228330 MtrunA17_Chr2g0319791 24.330 448 297 16 6 439 8 427 6.09e-20 92.0
Msa1228330 MtrunA17_Chr2g0319731 23.385 449 308 13 6 443 25 448 3.88e-19 89.7
Msa1228330 MtrunA17_Chr2g0319751 24.719 445 299 14 6 439 485 904 5.44e-19 90.5
Msa1228330 MtrunA17_Chr2g0319751 35.897 117 72 2 324 439 289 403 2.66e-15 79.0
Msa1228330 MtrunA17_Chr7g0243731 47.887 71 37 0 333 403 2 72 2.78e-18 79.3
Msa1228330 MtrunA17_Chr2g0321331 32.402 179 92 4 265 443 91 240 3.09e-18 84.7
Msa1228330 MtrunA17_Chr6g0449971 54.545 77 34 1 389 465 1 76 4.90e-18 79.0
Msa1228330 MtrunA17_Chr6g0469961 34.507 142 78 5 170 300 27 164 9.64e-16 74.7
Msa1228330 MtrunA17_Chr6g0453941 27.950 161 102 6 171 319 113 271 4.03e-15 75.5
Msa1228330 MtrunA17_Chr6g0454391 46.269 67 31 2 356 422 13 74 1.72e-13 67.0
Msa1228330 MtrunA17_Chr6g0453981 31.507 146 86 6 171 304 61 204 2.13e-13 69.7
Msa1228330 MtrunA17_Chr6g0454111 33.333 135 77 4 178 300 50 183 4.78e-12 64.7
Msa1228330 MtrunA17_Chr6g0477011 26.710 307 195 12 3 295 13 303 7.14e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1228330 AT4G01070.1 45.243 473 240 11 2 465 4 466 1.17e-133 394
Msa1228330 AT1G01420.1 47.009 468 230 13 6 465 8 465 1.37e-133 394
Msa1228330 AT1G01420.2 47.009 468 230 13 6 465 11 468 1.82e-133 394
Msa1228330 AT1G01390.1 46.921 471 227 14 6 465 8 466 5.00e-125 372
Msa1228330 AT1G01390.2 46.921 471 227 14 6 465 25 483 7.57e-125 372
Msa1228330 AT5G26310.1 36.458 480 277 11 4 469 5 470 5.44e-98 303
Msa1228330 AT3G50740.1 36.534 479 272 11 4 463 5 470 5.14e-94 293
Msa1228330 AT5G66690.1 36.285 463 271 9 4 455 5 454 5.48e-92 288
Msa1228330 AT2G18570.1 35.849 477 271 15 9 467 8 467 7.08e-83 264
Msa1228330 AT3G16520.3 35.332 467 274 11 7 462 6 455 2.99e-81 259
Msa1228330 AT4G36770.1 35.948 459 257 13 8 448 6 445 3.71e-81 259
Msa1228330 AT1G07260.1 34.829 468 262 14 11 455 13 460 7.68e-78 251
Msa1228330 AT3G16520.1 34.868 456 269 11 7 451 6 444 2.49e-77 249
Msa1228330 AT3G16520.2 34.868 456 269 11 7 451 6 444 2.64e-77 248
Msa1228330 AT4G01070.2 41.808 354 186 11 2 346 4 346 9.18e-77 244
Msa1228330 AT1G07250.1 31.762 488 295 12 1 466 1 472 1.54e-75 245
Msa1228330 AT2G18560.1 38.845 381 210 10 95 465 8 375 6.52e-74 238
Msa1228330 AT3G21790.1 32.231 484 292 13 4 462 2 474 7.03e-71 233
Msa1228330 AT2G29750.1 32.558 473 276 17 7 455 9 462 4.19e-69 228
Msa1228330 AT3G21780.1 33.195 482 274 14 4 459 2 461 9.49e-69 227
Msa1228330 AT3G21750.1 32.000 475 289 9 4 459 2 461 1.20e-68 227
Msa1228330 AT4G15280.1 30.913 482 296 13 4 462 2 469 1.19e-67 224
Msa1228330 AT4G15280.2 30.913 482 296 13 4 462 34 501 2.55e-67 224
Msa1228330 AT3G21800.1 31.743 482 292 13 1 459 1 468 6.68e-66 219
Msa1228330 AT2G29730.1 28.870 478 301 14 3 462 2 458 4.42e-65 217
Msa1228330 AT2G29740.1 31.092 476 290 13 2 455 4 463 7.97e-65 217
Msa1228330 AT1G07240.1 31.120 482 290 11 3 458 2 467 1.13e-64 216
Msa1228330 AT2G29710.1 29.474 475 296 14 3 459 2 455 3.53e-62 209
Msa1228330 AT4G15260.1 32.961 358 222 7 115 462 1 350 4.43e-62 206
Msa1228330 AT3G21760.1 31.828 487 286 14 4 459 2 473 2.37e-61 208
Msa1228330 AT4G34131.1 29.317 498 287 11 2 462 6 475 2.04e-57 197
Msa1228330 AT2G15490.1 30.162 494 281 17 1 455 1 469 9.86e-57 196
Msa1228330 AT2G15490.3 30.567 494 276 18 1 455 1 466 2.39e-56 194
Msa1228330 AT2G16890.2 30.691 492 277 16 6 466 9 467 1.87e-55 192
Msa1228330 AT2G36800.1 29.518 498 284 13 6 462 12 483 4.16e-54 189
Msa1228330 AT4G34135.1 30.285 492 291 11 2 462 7 477 1.61e-53 187
Msa1228330 AT2G15480.1 32.376 383 219 10 91 455 109 469 3.72e-53 186
Msa1228330 AT2G36770.1 29.918 488 294 18 6 462 14 484 1.29e-52 185
Msa1228330 AT2G15480.2 32.061 393 217 11 91 455 109 479 2.33e-52 184
Msa1228330 AT3G53160.1 31.568 491 282 17 6 462 8 478 1.38e-51 182
Msa1228330 AT1G22340.1 30.297 505 278 22 3 466 10 481 1.77e-51 181
Msa1228330 AT2G36780.1 30.242 496 282 16 6 462 14 484 2.05e-51 182
Msa1228330 AT5G14860.1 30.754 491 279 15 6 462 8 471 2.15e-51 181
Msa1228330 AT1G05675.1 29.522 481 287 14 1 462 1 448 4.37e-51 180
Msa1228330 AT1G05680.1 28.306 484 285 14 1 460 1 446 1.77e-49 175
Msa1228330 AT2G36760.1 30.020 493 273 15 6 455 14 477 2.74e-49 176
Msa1228330 AT2G36750.1 27.664 488 304 14 6 462 10 479 5.18e-49 175
Msa1228330 AT2G23260.1 28.870 478 283 13 2 459 6 446 1.53e-48 173
Msa1228330 AT4G34138.1 30.144 418 229 11 61 455 90 467 2.08e-48 173
Msa1228330 AT2G16890.3 30.067 449 251 15 6 424 9 424 2.26e-48 172
Msa1228330 AT1G22360.1 29.150 494 277 20 3 456 7 467 4.64e-48 172
Msa1228330 AT1G22400.1 29.124 491 282 16 2 455 9 470 1.01e-47 171
Msa1228330 AT2G36790.1 29.600 500 280 15 6 462 13 483 1.27e-47 171
Msa1228330 AT1G22380.1 29.792 480 277 17 3 449 10 462 1.41e-47 171
Msa1228330 AT3G53150.1 30.350 514 263 18 3 455 19 498 1.83e-47 171
Msa1228330 AT2G43820.1 27.823 496 279 18 2 468 3 448 1.99e-47 170
Msa1228330 AT2G43840.2 26.789 489 287 14 4 467 5 447 4.05e-47 169
Msa1228330 AT3G46680.1 29.019 479 286 16 1 462 4 445 1.45e-46 167
Msa1228330 AT2G31790.1 34.444 270 142 6 209 462 202 452 2.52e-46 167
Msa1228330 AT2G30140.2 29.752 484 283 15 2 468 9 452 3.14e-46 167
Msa1228330 AT2G43840.1 26.789 489 287 14 4 467 5 447 3.57e-46 166
Msa1228330 AT5G03490.1 28.542 487 279 16 2 462 15 458 4.03e-46 167
Msa1228330 AT3G46650.1 28.085 470 278 16 1 459 5 425 6.48e-46 165
Msa1228330 AT2G31750.1 34.432 273 145 7 209 466 201 454 1.63e-45 165
Msa1228330 AT2G30140.1 30.041 486 280 17 2 468 9 453 1.98e-45 164
Msa1228330 AT1G24100.1 28.719 484 278 14 4 460 9 452 2.73e-45 164
Msa1228330 AT2G31750.2 34.432 273 145 7 209 466 201 454 3.82e-45 164
Msa1228330 AT2G23250.1 28.540 459 279 14 17 462 9 431 4.19e-45 163
Msa1228330 AT1G10400.1 29.939 491 277 18 3 462 4 458 5.39e-45 164
Msa1228330 AT3G55700.1 28.274 481 301 14 2 469 4 453 7.58e-45 163
Msa1228330 AT3G46700.1 28.692 474 293 15 3 466 6 444 1.65e-44 162
Msa1228330 AT3G55710.1 29.243 489 290 15 2 469 4 457 3.77e-44 161
Msa1228330 AT5G59580.1 27.664 488 289 17 4 469 7 452 4.31e-44 161
Msa1228330 AT1G22370.2 29.569 487 277 17 3 455 10 464 3.09e-43 159
Msa1228330 AT5G17050.1 30.556 360 225 7 106 462 115 452 4.20e-43 158
Msa1228330 AT2G36970.1 26.210 496 308 16 2 468 6 472 5.18e-43 159
Msa1228330 AT3G46690.1 28.025 471 297 13 3 462 6 445 5.99e-43 158
Msa1228330 AT5G59590.1 27.253 466 300 14 3 459 7 442 8.18e-43 157
Msa1228330 AT1G78270.1 27.160 486 286 16 2 450 9 463 2.19e-42 157
Msa1228330 AT1G22360.2 28.511 470 266 19 3 430 7 448 2.49e-42 156
Msa1228330 AT5G05880.1 32.660 297 179 7 177 469 172 451 7.54e-42 155
Msa1228330 AT5G38010.1 27.368 475 300 13 2 462 6 449 2.89e-41 153
Msa1228330 AT5G12890.1 28.838 482 262 17 7 443 11 456 4.70e-41 153
Msa1228330 AT1G30530.1 31.356 354 211 10 106 455 114 439 3.08e-40 150
Msa1228330 AT3G46660.1 27.273 473 291 16 4 459 12 448 6.71e-40 149
Msa1228330 AT1G05560.1 31.302 361 216 12 111 462 110 447 8.36e-40 149
Msa1228330 AT4G15550.1 32.320 362 217 13 111 462 126 469 1.05e-39 149
Msa1228330 AT1G22370.1 35.395 291 155 10 180 455 22 294 1.23e-39 145
Msa1228330 AT1G05530.1 27.426 474 307 15 6 466 5 454 1.42e-39 149
Msa1228330 AT1G05560.2 31.302 361 216 12 111 462 160 497 2.29e-39 149
Msa1228330 AT5G38040.1 27.074 458 283 15 17 459 21 442 2.49e-39 148
Msa1228330 AT3G46670.1 28.025 471 282 17 7 459 10 441 3.09e-39 147
Msa1228330 AT2G30150.2 28.510 463 284 15 6 455 13 441 7.42e-39 147
Msa1228330 AT2G30150.1 28.326 466 287 15 10 462 1 432 1.87e-38 145
Msa1228330 AT1G51210.1 28.256 453 274 16 4 442 18 433 2.26e-38 145
Msa1228330 AT5G17030.1 28.710 411 259 11 64 469 77 458 2.79e-38 145
Msa1228330 AT5G49690.1 25.727 447 299 10 6 443 10 432 7.26e-38 144
Msa1228330 AT1G73880.1 28.898 481 290 20 4 462 12 462 9.97e-38 144
Msa1228330 AT3G11340.1 27.215 474 304 13 4 469 7 447 1.13e-37 143
Msa1228330 AT5G05860.1 33.984 256 151 5 211 463 204 444 1.77e-37 142
Msa1228330 AT5G05890.1 32.997 297 178 8 177 469 176 455 4.14e-37 142
Msa1228330 AT5G05870.1 29.859 355 219 9 120 466 122 454 9.65e-37 141
Msa1228330 AT2G26480.1 34.014 294 166 9 177 462 168 441 2.03e-36 140
Msa1228330 AT3G21560.1 26.122 490 304 15 6 466 12 472 2.40e-36 140
Msa1228330 AT3G02100.1 27.056 462 278 15 4 441 11 437 3.62e-36 139
Msa1228330 AT4G15490.1 25.255 491 313 15 2 466 4 466 2.23e-35 137
Msa1228330 AT2G28080.1 30.919 359 221 13 95 445 113 452 4.36e-35 137
Msa1228330 AT5G05900.1 31.271 291 171 8 177 462 177 443 5.75e-35 135
Msa1228330 AT5G17040.1 28.261 414 243 13 58 455 53 428 1.01e-34 135
Msa1228330 AT4G15480.1 28.329 353 228 7 123 466 142 478 1.05e-34 135
Msa1228330 AT3G46720.1 34.926 272 144 7 199 462 190 436 5.59e-34 133
Msa1228330 AT5G65550.1 25.499 451 283 14 4 431 7 427 1.15e-33 132
Msa1228330 AT4G15500.1 25.630 476 317 13 6 466 9 462 2.25e-33 132
Msa1228330 AT4G14090.1 33.200 250 141 9 213 455 214 444 2.57e-33 131
Msa1228330 AT1G06000.1 34.211 266 156 7 211 466 177 433 8.43e-33 129
Msa1228330 AT5G17040.2 30.233 301 184 7 167 462 54 333 5.29e-32 125
Msa1228330 AT3G29630.1 26.549 452 282 14 1 440 1 414 1.15e-31 126
Msa1228330 AT4G27570.1 26.364 440 280 12 4 432 5 411 3.11e-31 125
Msa1228330 AT1G50580.1 26.195 481 305 14 1 468 1 444 5.39e-31 124
Msa1228330 AT5G54010.1 26.411 443 283 12 1 432 1 411 1.06e-30 124
Msa1228330 AT4G27560.1 26.351 444 275 14 4 432 5 411 1.12e-29 121
Msa1228330 AT1G64910.1 25.607 453 282 15 1 440 1 411 2.58e-29 120
Msa1228330 AT2G22590.1 24.169 451 313 11 4 442 13 446 3.05e-29 120
Msa1228330 AT5G53990.1 26.281 449 270 16 1 432 1 405 1.83e-28 117
Msa1228330 AT3G29630.2 26.622 447 262 15 1 440 1 388 1.14e-27 115
Msa1228330 AT5G54060.1 25.328 458 313 11 7 455 14 451 9.29e-27 112
Msa1228330 AT5G37950.2 27.246 345 210 11 52 380 19 338 1.13e-26 110
Msa1228330 AT3G22250.1 34.197 193 98 8 257 445 273 440 3.87e-26 110
Msa1228330 AT5G37950.1 27.326 344 217 11 52 380 19 344 7.23e-26 108
Msa1228330 AT2G22930.1 22.934 484 294 14 1 464 1 425 3.43e-25 108
Msa1228330 AT1G64920.1 25.490 459 275 19 1 437 1 414 3.48e-24 105
Msa1228330 AT4G09500.2 25.111 450 274 16 1 432 1 405 6.02e-23 101
Msa1228330 AT4G09500.1 25.282 443 257 16 1 432 1 380 3.22e-22 99.0
Msa1228330 AT4G34135.2 26.667 330 205 10 2 304 7 326 1.18e-19 90.5

Find 85 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTAATTCAATGTGTTTA+AGG 0.145467 8_2:+3807778 Msa1228330:CDS
CTTTCACAAAGAATTATTTC+TGG 0.191482 8_2:-3807573 None:intergenic
TTGGAAAGAAACAGAGAAAA+TGG 0.199325 8_2:+3808014 Msa1228330:CDS
ATTAGACTCATTTCTAATAA+TGG 0.226365 8_2:-3807745 None:intergenic
ATTCAACTTGTGGAATTAAA+TGG 0.235675 8_2:-3807071 None:intergenic
TAAAGAAACAAGGTTAGTTT+TGG 0.255731 8_2:-3807334 None:intergenic
ATTTGGAGCCAGATATTATA+AGG 0.256438 8_2:+3807679 Msa1228330:CDS
AATCAGCACTTTCACTGATT+TGG 0.256891 8_2:+3807662 Msa1228330:CDS
TCTGTTCTTTATGTATGTTT+TGG 0.258567 8_2:+3807825 Msa1228330:CDS
ATGAGTTTCATTTGTGTTGC+AGG 0.282778 8_2:-3807261 None:intergenic
TGAAGAACCCTTATAATATC+TGG 0.294429 8_2:-3807687 None:intergenic
GGAATATCTTTGATATGAAA+TGG 0.301284 8_2:-3807552 None:intergenic
CAACTCAATGAGTTAGCATT+TGG 0.306842 8_2:+3807873 Msa1228330:CDS
CAATGAATTCATTGTGTTGT+TGG 0.323001 8_2:-3807110 None:intergenic
TTTACTTCTTCTTGTAGAAA+TGG 0.328693 8_2:-3807300 None:intergenic
GTATTTACCAAATGGTTTCT+TGG 0.330315 8_2:+3807995 Msa1228330:CDS
TTAGACTCATTTCTAATAAT+GGG 0.340721 8_2:-3807744 None:intergenic
TATGAAACTGTGAATATTCC+AGG 0.341809 8_2:+3807519 Msa1228330:CDS
ACTTTGGAGAGTGTGGTTAA+TGG 0.345363 8_2:+3808125 Msa1228330:CDS
CTTGGTCATGGTTCAATTGG+TGG 0.364820 8_2:+3808074 Msa1228330:CDS
TTCAAGACTTGTTGCATTGA+AGG 0.367448 8_2:-3807168 None:intergenic
AACCTTGTTTCTTTAATCTT+CGG 0.368883 8_2:+3807342 Msa1228330:CDS
TTCAATGTGTTTAAGGTGGT+TGG 0.369384 8_2:+3807785 Msa1228330:CDS
GCACCACAAGTTGAGATTCT+TGG 0.370993 8_2:+3808056 Msa1228330:CDS
TTTCTTTCCAAGAAACCATT+TGG 0.377931 8_2:-3808002 None:intergenic
GAAACAGAGTCGTCGAGATT+CGG 0.378552 8_2:-3807468 None:intergenic
CCACTTTCATCATCAACCTT+TGG 0.392355 8_2:-3808233 None:intergenic
AATCTTTGTTCTGCAAATAG+AGG 0.409100 8_2:-3808167 None:intergenic
ATTCTTGGTCATGGTTCAAT+TGG 0.416708 8_2:+3808071 Msa1228330:CDS
AATAGAGGCCATGCAATCAT+AGG 0.417514 8_2:-3808152 None:intergenic
GCAGAGTTAACAGCTTTACT+TGG 0.420196 8_2:-3807939 None:intergenic
AGAAGAATGAATTCTATGTT+TGG 0.423723 8_2:-3807201 None:intergenic
ATTGCTATGGTTCCTTCCCC+TGG 0.428614 8_2:+3807042 Msa1228330:CDS
AGAAGATAAGTTGAATTGTA+TGG 0.446826 8_2:-3807394 None:intergenic
CCGTTAGAGTATTTACCAAA+TGG 0.450358 8_2:+3807987 Msa1228330:CDS
CCAAAGGTTGATGATGAAAG+TGG 0.450373 8_2:+3808233 Msa1228330:CDS
ATGGATTGGTTGTTCCATCA+TGG 0.450594 8_2:+3808033 Msa1228330:CDS
TTGTGGTTGGGGTTCAACTT+TGG 0.450652 8_2:+3808109 Msa1228330:CDS
GTGTTGTTGGAGTAATTGTT+TGG 0.475857 8_2:-3807097 None:intergenic
TTTGGAGCCAGATATTATAA+GGG 0.493888 8_2:+3807680 Msa1228330:CDS
TGGATTGGTTGTTCCATCAT+GGG 0.505053 8_2:+3808034 Msa1228330:CDS
GAATATCTTTGATATGAAAT+GGG 0.509722 8_2:-3807551 None:intergenic
GGGTTCAACTTTGGAGAGTG+TGG 0.511321 8_2:+3808118 Msa1228330:CDS
CAAGTTGAGATTCTTGGTCA+TGG 0.513039 8_2:+3808062 Msa1228330:CDS
CATGGAAGGTGATGAAAGCT+TGG 0.514512 8_2:+3808298 Msa1228330:CDS
CATACATAAAGAACAGAACT+TGG 0.526486 8_2:-3807819 None:intergenic
GGAATTAAATGGCTAAGTCC+AGG 0.532715 8_2:-3807060 None:intergenic
TGTTTGGCAAATTCAACTTG+TGG 0.534373 8_2:-3807081 None:intergenic
CAAGTGAACATGGTTCATCT+AGG 0.540322 8_2:+3808369 Msa1228330:CDS
AGAATGAATTCTATGTTTGG+TGG 0.540562 8_2:-3807198 None:intergenic
GCAGGTTCAAGATTAATCTC+TGG 0.542912 8_2:-3807243 None:intergenic
TCAACTTGTGGTGCCCATGA+TGG 0.543506 8_2:-3808047 None:intergenic
GAATTAAATGGCTAAGTCCA+GGG 0.544089 8_2:-3807059 None:intergenic
TGAAATGGGATGACACAACC+TGG 0.545651 8_2:-3807537 None:intergenic
TTTCTAATAATGGGTCCCAC+TGG 0.554519 8_2:-3807735 None:intergenic
AAGAAACAGAGAAAATGGAT+TGG 0.554526 8_2:+3808019 Msa1228330:CDS
ATGGTGTTCCTATGATTGCA+TGG 0.560119 8_2:+3808144 Msa1228330:CDS
ACATTCATCATTCCAACACT+TGG 0.561131 8_2:+3807135 Msa1228330:CDS
TTAATTCAATGTGTTTAAGG+TGG 0.567516 8_2:+3807781 Msa1228330:CDS
AAGTGGGATAGTGAAAAGAG+AGG 0.570992 8_2:+3808250 Msa1228330:CDS
GGAGTGAGAGGACCAAGTGT+TGG 0.574957 8_2:-3807147 None:intergenic
GAGCACCTGAGGCATAGAAA+AGG 0.577258 8_2:-3807419 None:intergenic
GCATTTGGATTAGAATTGAG+TGG 0.582499 8_2:+3807888 Msa1228330:CDS
CCATTTGGTAAATACTCTAA+CGG 0.585513 8_2:-3807987 None:intergenic
AAACCTTGTGTTTATCCAGT+GGG 0.588499 8_2:+3807720 Msa1228330:CDS
TGAACATGGTTCATCTAGGA+AGG 0.588808 8_2:+3808373 Msa1228330:CDS
AGAATCAAAGAATTGAGTGA+TGG 0.599141 8_2:+3808332 Msa1228330:CDS
ACATAAAGAACAGAACTTGG+TGG 0.614992 8_2:-3807816 None:intergenic
GAAACCTTGTGTTTATCCAG+TGG 0.617602 8_2:+3807719 Msa1228330:CDS
TGTTGCATTGAAGGAGTGAG+AGG 0.618094 8_2:-3807159 None:intergenic
TGAGAATGAAAGAGCACCTG+AGG 0.624676 8_2:-3807430 None:intergenic
TATGGCAACTTCATGTGCAT+CGG 0.626877 8_2:-3807376 None:intergenic
TAAATGTGTAAAGAGAATCA+TGG 0.637525 8_2:+3808280 Msa1228330:CDS
CAAAGGTTGATGATGAAAGT+GGG 0.642278 8_2:+3808234 Msa1228330:CDS
GTTCAAGATTAATCTCTGGA+AGG 0.643047 8_2:-3807239 None:intergenic
GACCGAAGATTAAAGAAACA+AGG 0.654587 8_2:-3807344 None:intergenic
AAATGGCTAAGTCCAGGGGA+AGG 0.656957 8_2:-3807054 None:intergenic
TGTGTAAAGAGAATCATGGA+AGG 0.659730 8_2:+3808284 Msa1228330:CDS
CAAAGTGGCTGTGAGGCCAA+AGG 0.659851 8_2:+3808217 Msa1228330:CDS
TGACCAAGAATCTCAACTTG+TGG 0.660415 8_2:-3808059 None:intergenic
GCTGTTGCAACAAGTGAACA+TGG 0.680378 8_2:+3808359 Msa1228330:CDS
GGTCCCACTGGATAAACACA+AGG 0.696810 8_2:-3807723 None:intergenic
ATTGACAGATGTGCTCAAAG+TGG 0.698009 8_2:+3808202 Msa1228330:CDS
AATTAAATGGCTAAGTCCAG+GGG 0.708782 8_2:-3807058 None:intergenic
ATGTGCTCAAAGTGGCTGTG+AGG 0.734532 8_2:+3808210 Msa1228330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAACATACATTGCTA+TGG + chr8_2:3807029-3807048 Msa1228330:CDS 20.0%
!! GAATATCTTTGATATGAAAT+GGG - chr8_2:3807554-3807573 None:intergenic 20.0%
!! TTAGACTCATTTCTAATAAT+GGG - chr8_2:3807747-3807766 None:intergenic 20.0%
!! ATTAGACTCATTTCTAATAA+TGG - chr8_2:3807748-3807767 None:intergenic 20.0%
!! ACATTAATTCAATGTGTTTA+AGG + chr8_2:3807778-3807797 Msa1228330:CDS 20.0%
!! TAAAAAAACATACATTGCTA+TGG + chr8_2:3807029-3807048 Msa1228330:CDS 20.0%
!! GAATATCTTTGATATGAAAT+GGG - chr8_2:3807554-3807573 None:intergenic 20.0%
!! TTAGACTCATTTCTAATAAT+GGG - chr8_2:3807747-3807766 None:intergenic 20.0%
!! ATTAGACTCATTTCTAATAA+TGG - chr8_2:3807748-3807767 None:intergenic 20.0%
!! ACATTAATTCAATGTGTTTA+AGG + chr8_2:3807778-3807797 Msa1228330:CDS 20.0%
! ATTCAACTTGTGGAATTAAA+TGG - chr8_2:3807074-3807093 None:intergenic 25.0%
! AGAAGAATGAATTCTATGTT+TGG - chr8_2:3807204-3807223 None:intergenic 25.0%
! TTTACTTCTTCTTGTAGAAA+TGG - chr8_2:3807303-3807322 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG - chr8_2:3807337-3807356 None:intergenic 25.0%
!! AACCTTGTTTCTTTAATCTT+CGG + chr8_2:3807342-3807361 Msa1228330:CDS 25.0%
!! AGAAGATAAGTTGAATTGTA+TGG - chr8_2:3807397-3807416 None:intergenic 25.0%
!!! TGAAGTAGAGTTTTTAGAAT+CGG + chr8_2:3807494-3807513 Msa1228330:CDS 25.0%
! GGAATATCTTTGATATGAAA+TGG - chr8_2:3807555-3807574 None:intergenic 25.0%
! CTTTCACAAAGAATTATTTC+TGG - chr8_2:3807576-3807595 None:intergenic 25.0%
! TTAATTCAATGTGTTTAAGG+TGG + chr8_2:3807781-3807800 Msa1228330:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG + chr8_2:3807825-3807844 Msa1228330:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG + chr8_2:3807826-3807845 Msa1228330:CDS 25.0%
! TAAATGTGTAAAGAGAATCA+TGG + chr8_2:3808280-3808299 Msa1228330:CDS 25.0%
! ATTCAACTTGTGGAATTAAA+TGG - chr8_2:3807074-3807093 None:intergenic 25.0%
! AGAAGAATGAATTCTATGTT+TGG - chr8_2:3807204-3807223 None:intergenic 25.0%
! TTTACTTCTTCTTGTAGAAA+TGG - chr8_2:3807303-3807322 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG - chr8_2:3807337-3807356 None:intergenic 25.0%
!! AACCTTGTTTCTTTAATCTT+CGG + chr8_2:3807342-3807361 Msa1228330:CDS 25.0%
!! AGAAGATAAGTTGAATTGTA+TGG - chr8_2:3807397-3807416 None:intergenic 25.0%
!!! TGAAGTAGAGTTTTTAGAAT+CGG + chr8_2:3807494-3807513 Msa1228330:CDS 25.0%
! GGAATATCTTTGATATGAAA+TGG - chr8_2:3807555-3807574 None:intergenic 25.0%
! CTTTCACAAAGAATTATTTC+TGG - chr8_2:3807576-3807595 None:intergenic 25.0%
! TTAATTCAATGTGTTTAAGG+TGG + chr8_2:3807781-3807800 Msa1228330:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG + chr8_2:3807825-3807844 Msa1228330:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG + chr8_2:3807826-3807845 Msa1228330:CDS 25.0%
! TAAATGTGTAAAGAGAATCA+TGG + chr8_2:3808280-3808299 Msa1228330:CDS 25.0%
CAATGAATTCATTGTGTTGT+TGG - chr8_2:3807113-3807132 None:intergenic 30.0%
AGAATGAATTCTATGTTTGG+TGG - chr8_2:3807201-3807220 None:intergenic 30.0%
! TTCTAAAAACTCTACTTCAG+AGG - chr8_2:3807493-3807512 None:intergenic 30.0%
TATGAAACTGTGAATATTCC+AGG + chr8_2:3807519-3807538 Msa1228330:CDS 30.0%
CAAAAACTCTCATTAGTTGA+TGG + chr8_2:3807633-3807652 Msa1228330:CDS 30.0%
! ATTTGGAGCCAGATATTATA+AGG + chr8_2:3807679-3807698 Msa1228330:CDS 30.0%
! TTTGGAGCCAGATATTATAA+GGG + chr8_2:3807680-3807699 Msa1228330:CDS 30.0%
TGAAGAACCCTTATAATATC+TGG - chr8_2:3807690-3807709 None:intergenic 30.0%
CATACATAAAGAACAGAACT+TGG - chr8_2:3807822-3807841 None:intergenic 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG + chr8_2:3807951-3807970 Msa1228330:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG - chr8_2:3807990-3808009 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG + chr8_2:3807995-3808014 Msa1228330:CDS 30.0%
TTTCTTTCCAAGAAACCATT+TGG - chr8_2:3808005-3808024 None:intergenic 30.0%
TTGGAAAGAAACAGAGAAAA+TGG + chr8_2:3808014-3808033 Msa1228330:CDS 30.0%
AAGAAACAGAGAAAATGGAT+TGG + chr8_2:3808019-3808038 Msa1228330:CDS 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG + chr8_2:3808097-3808116 Msa1228330:CDS 30.0%
AATCTTTGTTCTGCAAATAG+AGG - chr8_2:3808170-3808189 None:intergenic 30.0%
AGAATCAAAGAATTGAGTGA+TGG + chr8_2:3808332-3808351 Msa1228330:CDS 30.0%
CAATGAATTCATTGTGTTGT+TGG - chr8_2:3807113-3807132 None:intergenic 30.0%
AGAATGAATTCTATGTTTGG+TGG - chr8_2:3807201-3807220 None:intergenic 30.0%
! TTCTAAAAACTCTACTTCAG+AGG - chr8_2:3807493-3807512 None:intergenic 30.0%
TATGAAACTGTGAATATTCC+AGG + chr8_2:3807519-3807538 Msa1228330:CDS 30.0%
CAAAAACTCTCATTAGTTGA+TGG + chr8_2:3807633-3807652 Msa1228330:CDS 30.0%
! ATTTGGAGCCAGATATTATA+AGG + chr8_2:3807679-3807698 Msa1228330:CDS 30.0%
! TTTGGAGCCAGATATTATAA+GGG + chr8_2:3807680-3807699 Msa1228330:CDS 30.0%
TGAAGAACCCTTATAATATC+TGG - chr8_2:3807690-3807709 None:intergenic 30.0%
CATACATAAAGAACAGAACT+TGG - chr8_2:3807822-3807841 None:intergenic 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG + chr8_2:3807951-3807970 Msa1228330:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG - chr8_2:3807990-3808009 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG + chr8_2:3807995-3808014 Msa1228330:CDS 30.0%
TTTCTTTCCAAGAAACCATT+TGG - chr8_2:3808005-3808024 None:intergenic 30.0%
TTGGAAAGAAACAGAGAAAA+TGG + chr8_2:3808014-3808033 Msa1228330:CDS 30.0%
AAGAAACAGAGAAAATGGAT+TGG + chr8_2:3808019-3808038 Msa1228330:CDS 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG + chr8_2:3808097-3808116 Msa1228330:CDS 30.0%
AATCTTTGTTCTGCAAATAG+AGG - chr8_2:3808170-3808189 None:intergenic 30.0%
AGAATCAAAGAATTGAGTGA+TGG + chr8_2:3808332-3808351 Msa1228330:CDS 30.0%
AATTAAATGGCTAAGTCCAG+GGG - chr8_2:3807061-3807080 None:intergenic 35.0%
GAATTAAATGGCTAAGTCCA+GGG - chr8_2:3807062-3807081 None:intergenic 35.0%
TGTTTGGCAAATTCAACTTG+TGG - chr8_2:3807084-3807103 None:intergenic 35.0%
! GTGTTGTTGGAGTAATTGTT+TGG - chr8_2:3807100-3807119 None:intergenic 35.0%
ACATTCATCATTCCAACACT+TGG + chr8_2:3807135-3807154 Msa1228330:CDS 35.0%
!! TTCAAGACTTGTTGCATTGA+AGG - chr8_2:3807171-3807190 None:intergenic 35.0%
GTTCAAGATTAATCTCTGGA+AGG - chr8_2:3807242-3807261 None:intergenic 35.0%
ATGAGTTTCATTTGTGTTGC+AGG - chr8_2:3807264-3807283 None:intergenic 35.0%
GACCGAAGATTAAAGAAACA+AGG - chr8_2:3807347-3807366 None:intergenic 35.0%
! AATCAGCACTTTCACTGATT+TGG + chr8_2:3807662-3807681 Msa1228330:CDS 35.0%
AAACCTTGTGTTTATCCAGT+GGG + chr8_2:3807720-3807739 Msa1228330:CDS 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG + chr8_2:3807785-3807804 Msa1228330:CDS 35.0%
ACATAAAGAACAGAACTTGG+TGG - chr8_2:3807819-3807838 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG + chr8_2:3807831-3807850 Msa1228330:CDS 35.0%
CAACTCAATGAGTTAGCATT+TGG + chr8_2:3807873-3807892 Msa1228330:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG + chr8_2:3807888-3807907 Msa1228330:CDS 35.0%
TGAGTGGTAAAAAGTTCTTG+TGG + chr8_2:3807904-3807923 Msa1228330:CDS 35.0%
GAGTGGTAAAAAGTTCTTGT+GGG + chr8_2:3807905-3807924 Msa1228330:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG + chr8_2:3807987-3808006 Msa1228330:CDS 35.0%
ATTCTTGGTCATGGTTCAAT+TGG + chr8_2:3808071-3808090 Msa1228330:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG + chr8_2:3808096-3808115 Msa1228330:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG + chr8_2:3808098-3808117 Msa1228330:CDS 35.0%
!! CAAAGGTTGATGATGAAAGT+GGG + chr8_2:3808234-3808253 Msa1228330:CDS 35.0%
TGTGTAAAGAGAATCATGGA+AGG + chr8_2:3808284-3808303 Msa1228330:CDS 35.0%
AATTAAATGGCTAAGTCCAG+GGG - chr8_2:3807061-3807080 None:intergenic 35.0%
GAATTAAATGGCTAAGTCCA+GGG - chr8_2:3807062-3807081 None:intergenic 35.0%
TGTTTGGCAAATTCAACTTG+TGG - chr8_2:3807084-3807103 None:intergenic 35.0%
! GTGTTGTTGGAGTAATTGTT+TGG - chr8_2:3807100-3807119 None:intergenic 35.0%
ACATTCATCATTCCAACACT+TGG + chr8_2:3807135-3807154 Msa1228330:CDS 35.0%
!! TTCAAGACTTGTTGCATTGA+AGG - chr8_2:3807171-3807190 None:intergenic 35.0%
GTTCAAGATTAATCTCTGGA+AGG - chr8_2:3807242-3807261 None:intergenic 35.0%
ATGAGTTTCATTTGTGTTGC+AGG - chr8_2:3807264-3807283 None:intergenic 35.0%
GACCGAAGATTAAAGAAACA+AGG - chr8_2:3807347-3807366 None:intergenic 35.0%
! AATCAGCACTTTCACTGATT+TGG + chr8_2:3807662-3807681 Msa1228330:CDS 35.0%
AAACCTTGTGTTTATCCAGT+GGG + chr8_2:3807720-3807739 Msa1228330:CDS 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG + chr8_2:3807785-3807804 Msa1228330:CDS 35.0%
ACATAAAGAACAGAACTTGG+TGG - chr8_2:3807819-3807838 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG + chr8_2:3807831-3807850 Msa1228330:CDS 35.0%
CAACTCAATGAGTTAGCATT+TGG + chr8_2:3807873-3807892 Msa1228330:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG + chr8_2:3807888-3807907 Msa1228330:CDS 35.0%
TGAGTGGTAAAAAGTTCTTG+TGG + chr8_2:3807904-3807923 Msa1228330:CDS 35.0%
GAGTGGTAAAAAGTTCTTGT+GGG + chr8_2:3807905-3807924 Msa1228330:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG + chr8_2:3807987-3808006 Msa1228330:CDS 35.0%
ATTCTTGGTCATGGTTCAAT+TGG + chr8_2:3808071-3808090 Msa1228330:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG + chr8_2:3808096-3808115 Msa1228330:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG + chr8_2:3808098-3808117 Msa1228330:CDS 35.0%
!! CAAAGGTTGATGATGAAAGT+GGG + chr8_2:3808234-3808253 Msa1228330:CDS 35.0%
TGTGTAAAGAGAATCATGGA+AGG + chr8_2:3808284-3808303 Msa1228330:CDS 35.0%
GGAATTAAATGGCTAAGTCC+AGG - chr8_2:3807063-3807082 None:intergenic 40.0%
!!! TCTGGAAGGTGTTTTACTTG+AGG - chr8_2:3807228-3807247 None:intergenic 40.0%
GCAGGTTCAAGATTAATCTC+TGG - chr8_2:3807246-3807265 None:intergenic 40.0%
TATGGCAACTTCATGTGCAT+CGG - chr8_2:3807379-3807398 None:intergenic 40.0%
! TCTTACCTTTTCTATGCCTC+AGG + chr8_2:3807414-3807433 Msa1228330:CDS 40.0%
GAAACCTTGTGTTTATCCAG+TGG + chr8_2:3807719-3807738 Msa1228330:CDS 40.0%
!! TTTCTAATAATGGGTCCCAC+TGG - chr8_2:3807738-3807757 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG + chr8_2:3807834-3807853 Msa1228330:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG - chr8_2:3807942-3807961 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG + chr8_2:3808033-3808052 Msa1228330:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG + chr8_2:3808034-3808053 Msa1228330:CDS 40.0%
TGACCAAGAATCTCAACTTG+TGG - chr8_2:3808062-3808081 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG + chr8_2:3808062-3808081 Msa1228330:CDS 40.0%
!!! GGTGGTTTTTTGAGTCATTG+TGG + chr8_2:3808092-3808111 Msa1228330:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG + chr8_2:3808125-3808144 Msa1228330:CDS 40.0%
ATGGTGTTCCTATGATTGCA+TGG + chr8_2:3808144-3808163 Msa1228330:CDS 40.0%
AATAGAGGCCATGCAATCAT+AGG - chr8_2:3808155-3808174 None:intergenic 40.0%
ATTGACAGATGTGCTCAAAG+TGG + chr8_2:3808202-3808221 Msa1228330:CDS 40.0%
CCACTTTCATCATCAACCTT+TGG - chr8_2:3808236-3808255 None:intergenic 40.0%
!! CCAAAGGTTGATGATGAAAG+TGG + chr8_2:3808233-3808252 Msa1228330:CDS 40.0%
AAGTGGGATAGTGAAAAGAG+AGG + chr8_2:3808250-3808269 Msa1228330:CDS 40.0%
CAAGTGAACATGGTTCATCT+AGG + chr8_2:3808369-3808388 Msa1228330:CDS 40.0%
TGAACATGGTTCATCTAGGA+AGG + chr8_2:3808373-3808392 Msa1228330:CDS 40.0%
GGAATTAAATGGCTAAGTCC+AGG - chr8_2:3807063-3807082 None:intergenic 40.0%
!!! TCTGGAAGGTGTTTTACTTG+AGG - chr8_2:3807228-3807247 None:intergenic 40.0%
GCAGGTTCAAGATTAATCTC+TGG - chr8_2:3807246-3807265 None:intergenic 40.0%
TATGGCAACTTCATGTGCAT+CGG - chr8_2:3807379-3807398 None:intergenic 40.0%
! TCTTACCTTTTCTATGCCTC+AGG + chr8_2:3807414-3807433 Msa1228330:CDS 40.0%
GAAACCTTGTGTTTATCCAG+TGG + chr8_2:3807719-3807738 Msa1228330:CDS 40.0%
!! TTTCTAATAATGGGTCCCAC+TGG - chr8_2:3807738-3807757 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG + chr8_2:3807834-3807853 Msa1228330:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG - chr8_2:3807942-3807961 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG + chr8_2:3808033-3808052 Msa1228330:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG + chr8_2:3808034-3808053 Msa1228330:CDS 40.0%
TGACCAAGAATCTCAACTTG+TGG - chr8_2:3808062-3808081 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG + chr8_2:3808062-3808081 Msa1228330:CDS 40.0%
!!! GGTGGTTTTTTGAGTCATTG+TGG + chr8_2:3808092-3808111 Msa1228330:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG + chr8_2:3808125-3808144 Msa1228330:CDS 40.0%
ATGGTGTTCCTATGATTGCA+TGG + chr8_2:3808144-3808163 Msa1228330:CDS 40.0%
AATAGAGGCCATGCAATCAT+AGG - chr8_2:3808155-3808174 None:intergenic 40.0%
ATTGACAGATGTGCTCAAAG+TGG + chr8_2:3808202-3808221 Msa1228330:CDS 40.0%
CCACTTTCATCATCAACCTT+TGG - chr8_2:3808236-3808255 None:intergenic 40.0%
!! CCAAAGGTTGATGATGAAAG+TGG + chr8_2:3808233-3808252 Msa1228330:CDS 40.0%
AAGTGGGATAGTGAAAAGAG+AGG + chr8_2:3808250-3808269 Msa1228330:CDS 40.0%
CAAGTGAACATGGTTCATCT+AGG + chr8_2:3808369-3808388 Msa1228330:CDS 40.0%
TGAACATGGTTCATCTAGGA+AGG + chr8_2:3808373-3808392 Msa1228330:CDS 40.0%
TGTTGCATTGAAGGAGTGAG+AGG - chr8_2:3807162-3807181 None:intergenic 45.0%
!! TGAGAATGAAAGAGCACCTG+AGG - chr8_2:3807433-3807452 None:intergenic 45.0%
GAAACAGAGTCGTCGAGATT+CGG - chr8_2:3807471-3807490 None:intergenic 45.0%
TGAAATGGGATGACACAACC+TGG - chr8_2:3807540-3807559 None:intergenic 45.0%
! GCACCACAAGTTGAGATTCT+TGG + chr8_2:3808056-3808075 Msa1228330:CDS 45.0%
CTTGGTCATGGTTCAATTGG+TGG + chr8_2:3808074-3808093 Msa1228330:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG + chr8_2:3808109-3808128 Msa1228330:CDS 45.0%
CATGGAAGGTGATGAAAGCT+TGG + chr8_2:3808298-3808317 Msa1228330:CDS 45.0%
GCTGTTGCAACAAGTGAACA+TGG + chr8_2:3808359-3808378 Msa1228330:CDS 45.0%
TGTTGCATTGAAGGAGTGAG+AGG - chr8_2:3807162-3807181 None:intergenic 45.0%
!! TGAGAATGAAAGAGCACCTG+AGG - chr8_2:3807433-3807452 None:intergenic 45.0%
GAAACAGAGTCGTCGAGATT+CGG - chr8_2:3807471-3807490 None:intergenic 45.0%
TGAAATGGGATGACACAACC+TGG - chr8_2:3807540-3807559 None:intergenic 45.0%
! GCACCACAAGTTGAGATTCT+TGG + chr8_2:3808056-3808075 Msa1228330:CDS 45.0%
CTTGGTCATGGTTCAATTGG+TGG + chr8_2:3808074-3808093 Msa1228330:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG + chr8_2:3808109-3808128 Msa1228330:CDS 45.0%
CATGGAAGGTGATGAAAGCT+TGG + chr8_2:3808298-3808317 Msa1228330:CDS 45.0%
GCTGTTGCAACAAGTGAACA+TGG + chr8_2:3808359-3808378 Msa1228330:CDS 45.0%
ATTGCTATGGTTCCTTCCCC+TGG + chr8_2:3807042-3807061 Msa1228330:CDS 50.0%
AAATGGCTAAGTCCAGGGGA+AGG - chr8_2:3807057-3807076 None:intergenic 50.0%
GAGCACCTGAGGCATAGAAA+AGG - chr8_2:3807422-3807441 None:intergenic 50.0%
GGTCCCACTGGATAAACACA+AGG - chr8_2:3807726-3807745 None:intergenic 50.0%
TCAACTTGTGGTGCCCATGA+TGG - chr8_2:3808050-3808069 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG + chr8_2:3808118-3808137 Msa1228330:CDS 50.0%
ATGTGCTCAAAGTGGCTGTG+AGG + chr8_2:3808210-3808229 Msa1228330:CDS 50.0%
ATTGCTATGGTTCCTTCCCC+TGG + chr8_2:3807042-3807061 Msa1228330:CDS 50.0%
AAATGGCTAAGTCCAGGGGA+AGG - chr8_2:3807057-3807076 None:intergenic 50.0%
GAGCACCTGAGGCATAGAAA+AGG - chr8_2:3807422-3807441 None:intergenic 50.0%
GGTCCCACTGGATAAACACA+AGG - chr8_2:3807726-3807745 None:intergenic 50.0%
TCAACTTGTGGTGCCCATGA+TGG - chr8_2:3808050-3808069 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG + chr8_2:3808118-3808137 Msa1228330:CDS 50.0%
ATGTGCTCAAAGTGGCTGTG+AGG + chr8_2:3808210-3808229 Msa1228330:CDS 50.0%
GGAGTGAGAGGACCAAGTGT+TGG - chr8_2:3807150-3807169 None:intergenic 55.0%
CAAAGTGGCTGTGAGGCCAA+AGG + chr8_2:3808217-3808236 Msa1228330:CDS 55.0%
GGAGTGAGAGGACCAAGTGT+TGG - chr8_2:3807150-3807169 None:intergenic 55.0%
CAAAGTGGCTGTGAGGCCAA+AGG + chr8_2:3808217-3808236 Msa1228330:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 3807024 3808433 3807024 ID=Msa1228330;Name=Msa1228330
chr8_2 mRNA 3807024 3808433 3807024 ID=Msa1228330-mRNA-1;Parent=Msa1228330;Name=Msa1228330-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|469
chr8_2 exon 3807024 3808433 3807024 ID=Msa1228330-mRNA-1:exon:1175;Parent=Msa1228330-mRNA-1
chr8_2 CDS 3807024 3808433 3807024 ID=Msa1228330-mRNA-1:cds;Parent=Msa1228330-mRNA-1
Gene Sequence

>Msa1228330

ATGAATAAAAAAACATACATTGCTATGGTTCCTTCCCCTGGACTTAGCCATTTAATTCCACAAGTTGAATTTGCCAAACAATTACTCCAACAACACAATGAATTCATTGTCACATTCATCATTCCAACACTTGGTCCTCTCACTCCTTCAATGCAACAAGTCTTGAACACTCTTCCACCAAACATAGAATTCATTCTTCTTCCTCAAGTAAAACACCTTCCAGAGATTAATCTTGAACCTGCAACACAAATGAAACTCATTGTGAAACATTCTATTCCATTTCTACAAGAAGAAGTAAAATCACTCATTTCCAAAACTAACCTTGTTTCTTTAATCTTCGGTCTATTCTCAACCGATGCACATGAAGTTGCCATACAATTCAACTTATCTTCTTACCTTTTCTATGCCTCAGGTGCTCTTTCATTCTCATTCTTTCTCACTCTTCCGAATCTCGACGACTCTGTTTCCTCTGAAGTAGAGTTTTTAGAATCGGCTTATGAAACTGTGAATATTCCAGGTTGTGTCATCCCATTTCATATCAAAGATATTCCAGAAATAATTCTTTGTGAAAGATCAAATGTAAATTACAAAACATTTCTTGAAGTTTGTCAAAAACTCTCATTAGTTGATGGTTTTATAATCAGCACTTTCACTGATTTGGAGCCAGATATTATAAGGGTTCTTCAAGAAAAAGTGAAACCTTGTGTTTATCCAGTGGGACCCATTATTAGAAATGAGTCTAATTGTGAAGATAACATTAATTCAATGTGTTTAAGGTGGTTGGAAAATCAACCACCAAGTTCTGTTCTTTATGTATGTTTTGGGAGTGGTGGAACAGTTTCTCATGAACAACTCAATGAGTTAGCATTTGGATTAGAATTGAGTGGTAAAAAGTTCTTGTGGGTTGTGAGAGTTCCAAGTAAAGCTGTTAACTCTGCTTATTTTGTTGGAGCAAAAGATGATCCGTTAGAGTATTTACCAAATGGTTTCTTGGAAAGAAACAGAGAAAATGGATTGGTTGTTCCATCATGGGCACCACAAGTTGAGATTCTTGGTCATGGTTCAATTGGTGGTTTTTTGAGTCATTGTGGTTGGGGTTCAACTTTGGAGAGTGTGGTTAATGGTGTTCCTATGATTGCATGGCCTCTATTTGCAGAACAAAGATTGAATGCTAGATTATTGACAGATGTGCTCAAAGTGGCTGTGAGGCCAAAGGTTGATGATGAAAGTGGGATAGTGAAAAGAGAGGAAGTTGCTAAATGTGTAAAGAGAATCATGGAAGGTGATGAAAGCTTGGAGATACAAAAGAGAATCAAAGAATTGAGTGATGGTGCTGCTGTTGCAACAAGTGAACATGGTTCATCTAGGAAGGCACTCTCTTCTTTAGCATTGAAATTACATAACTTTTGA
Protein sequence

>Msa1228330

MNKKTYIAMVPSPGLSHLIPQVEFAKQLLQQHNEFIVTFIIPTLGPLTPSMQQVLNTLPPNIEFILLPQVKHLPEINLEPATQMKLIVKHSIPFLQEEVKSLISKTNLVSLIFGLFSTDAHEVAIQFNLSSYLFYASGALSFSFFLTLPNLDDSVSSEVEFLESAYETVNIPGCVIPFHIKDIPEIILCERSNVNYKTFLEVCQKLSLVDGFIISTFTDLEPDIIRVLQEKVKPCVYPVGPIIRNESNCEDNINSMCLRWLENQPPSSVLYVCFGSGGTVSHEQLNELAFGLELSGKKFLWVVRVPSKAVNSAYFVGAKDDPLEYLPNGFLERNRENGLVVPSWAPQVEILGHGSIGGFLSHCGWGSTLESVVNGVPMIAWPLFAEQRLNARLLTDVLKVAVRPKVDDESGIVKREEVAKCVKRIMEGDESLEIQKRIKELSDGAAVATSEHGSSRKALSSLALKLHNF*