AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0668000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0668000 MtrunA17_Chr4g0006731 94.495 109 6 0 1 109 163 271 4.66e-72 216
Msa0668000 MtrunA17_Chr7g0242451 68.085 94 29 1 1 94 161 253 2.98e-44 144
Msa0668000 MtrunA17_Chr7g0242401 65.591 93 32 0 1 93 188 280 7.50e-41 136
Msa0668000 MtrunA17_Chr3g0113401 65.957 94 32 0 1 94 163 256 1.66e-40 135
Msa0668000 MtrunA17_Chr7g0242461 60.638 94 37 0 1 94 161 254 5.33e-40 134
Msa0668000 MtrunA17_Chr4g0006701 93.548 62 4 0 59 120 1 62 3.96e-39 127
Msa0668000 MtrunA17_Chr7g0242391 57.895 95 39 1 1 94 161 255 6.53e-36 123
Msa0668000 MtrunA17_Chr7g0242411 60.215 93 36 1 1 93 153 244 1.69e-35 122
Msa0668000 MtrunA17_Chr7g0242431 58.065 93 39 0 1 93 187 279 3.07e-35 122
Msa0668000 MtrunA17_Chr7g0242441 51.724 87 27 1 1 87 111 182 1.69e-22 87.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0668000 AT3G11210.1 62.069 87 33 0 1 87 163 249 1.48e-35 122
Msa0668000 AT2G38180.1 50.000 94 38 3 1 92 161 247 6.03e-25 96.3

Find 120 sgRNAs with CRISPR-Local

Find 1204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCAAATTCATTAAACTTTC+AGG 0.079625 4_4:+8882216 Msa0668000:five_prime_UTR
AAAAGTATTTGAAATGATTT+TGG 0.099467 4_4:+8889604 Msa0668000:intron
TTTCCCATTCAAAATGTTTC+TGG 0.167567 4_4:-8883624 Msa0668010:intron
AACTCTAATGAATAAATTAT+TGG 0.192391 4_4:+8882984 Msa0668000:five_prime_UTR
GTTCTAACCTGTTTGTTAAA+TGG 0.210150 4_4:-8882338 None:intergenic
CATTGGTTATTGTGTACTTT+GGG 0.211907 4_4:+8881958 Msa0668000:five_prime_UTR
AACACAATTTGAGGCCTTAT+TGG 0.242625 4_4:-8880301 None:intergenic
TTTAGTATTGGAAGGGAAAA+TGG 0.244883 4_4:+8880273 Msa0668000:five_prime_UTR
GAATTCAAGGCGTGCTGTTC+AGG 0.251854 4_4:+8881136 Msa0668000:five_prime_UTR
GACTTAAAGCAGTAATATAT+TGG 0.251971 4_4:+8883006 Msa0668000:five_prime_UTR
CCGCTGTCAAACACTATCTT+AGG 0.256672 4_4:+8882505 Msa0668000:five_prime_UTR
TCCTTTGCATGCACTTGTTA+TGG 0.274403 4_4:-8880193 None:intergenic
AATATATCTCATGTAACTTT+TGG 0.306844 4_4:-8882777 None:intergenic
TGATAGCTGATTCTTCAAAT+TGG 0.316352 4_4:-8883684 Msa0668010:intron
GTTCTGATTGCAACGACTTT+TGG 0.323131 4_4:+8882238 Msa0668000:five_prime_UTR
TACCTTTGGAAAGTTATATC+AGG 0.325335 4_4:+8883752 Msa0668000:three_prime_UTR
TTTGACAGCGGACAACAAAA+TGG 0.332420 4_4:-8882493 None:intergenic
GAAGATTATTATCCATCTTA+AGG 0.337002 4_4:+8882058 Msa0668000:five_prime_UTR
ACAAAAGAGAATATGAGTTT+TGG 0.342569 4_4:+8882364 Msa0668000:five_prime_UTR
TGCAGACACAATCACGGTTA+TGG 0.349300 4_4:-8882827 None:intergenic
GATTCATTTGTCCTCTTTAG+TGG 0.350705 4_4:-8883031 None:intergenic
AGGCCTCAAATTGTGTTGTT+TGG 0.353098 4_4:+8880307 Msa0668000:five_prime_UTR
ATAATTTCAGAAAATGAAAA+TGG 0.359945 4_4:-8882613 None:intergenic
ACTTTATTCAGAAGCATGTT+TGG 0.363601 4_4:+8883060 Msa0668000:five_prime_UTR
TCATTGGTTATTGTGTACTT+TGG 0.375419 4_4:+8881957 Msa0668000:five_prime_UTR
TGCTGTTGAGCAACCATCAT+TGG 0.380272 4_4:+8881941 Msa0668000:five_prime_UTR
GAATCTTCAGCAAATTCATT+TGG 0.383216 4_4:-8883541 Msa0668010:CDS
TAGTTATAGTGATGAAGGTT+GGG 0.383224 4_4:+8880348 Msa0668000:five_prime_UTR
AAGGCGTGCTGTTCAGGTTC+TGG 0.385053 4_4:+8881142 Msa0668000:five_prime_UTR
AACTCAGTTATAGACCTTGC+TGG 0.388803 4_4:-8883711 Msa0668010:intron
GTGATGACCATTCGATGGTT+TGG 0.395292 4_4:-8883662 Msa0668010:intron
TGCATGCACTTGTTATGGTC+AGG 0.401200 4_4:-8880188 None:intergenic
TGTTAAATGGTACCTAGTTA+AGG 0.401370 4_4:-8882325 None:intergenic
CTAGGTACCATTTAACAAAC+AGG 0.404036 4_4:+8882331 Msa0668000:five_prime_UTR
AAAAGTTACATGAGATATAT+TGG 0.404605 4_4:+8882779 Msa0668000:five_prime_UTR
CATCCACATCCGTCTGGACT+TGG 0.410168 4_4:+8881996 Msa0668000:five_prime_UTR
GGAAAATGGTAGGACCAATA+AGG 0.411315 4_4:+8880287 Msa0668000:five_prime_UTR
TCTATAGCAACTGGATCATA+TGG 0.419003 4_4:-8883565 Msa0668010:CDS
CAACTTAGTTATAGTGATGA+AGG 0.419570 4_4:+8880343 Msa0668000:five_prime_UTR
TGAATTTGCGCCTCGTTGAC+TGG 0.419861 4_4:-8882203 None:intergenic
ACTTAAAGCAGTAATATATT+GGG 0.420900 4_4:+8883007 Msa0668000:five_prime_UTR
GGTTCCAGTCGGCGTCTTTG+AGG 0.426322 4_4:-8883495 Msa0668010:CDS
CTATAAATTAAGAACATTTG+TGG 0.426437 4_4:+8880243 Msa0668000:five_prime_UTR
CACTTCAGCAAAGGGATGAT+TGG 0.428841 4_4:+8883128 Msa0668000:CDS
AAAATGTTAACGAGTGTCCC+TGG 0.440012 4_4:-8883829 Msa0668010:intron
CTACTGTAAATGTCTCCAAC+TGG 0.444532 4_4:+8883596 Msa0668000:CDS
AATCACATAGCATAAATAGA+AGG 0.448223 4_4:-8882287 None:intergenic
TATGTGTCGACATCGGTATC+TGG 0.452075 4_4:-8882577 None:intergenic
AACATAAAGGTTATAAGCAA+TGG 0.452682 4_4:-8882681 None:intergenic
TTTAACGAGTGCCCCTCCCC+AGG 0.465329 4_4:+8883811 Msa0668000:three_prime_UTR
TAATAAAAGTATAACAGAAT+AGG 0.470820 4_4:+8882391 Msa0668000:five_prime_UTR
ATGTTCTTAATTTATAGACT+TGG 0.481902 4_4:-8880237 None:intergenic
CTGGTCTGCACTTCAGCAAA+GGG 0.483151 4_4:+8883120 Msa0668000:CDS
GATACTGTGGTTGGAATTCA+AGG 0.484531 4_4:+8881123 Msa0668000:five_prime_UTR
TGAAATAAATGTGCCATTTG+TGG 0.488624 4_4:-8882714 None:intergenic
ACATAAAGGTTATAAGCAAT+GGG 0.492416 4_4:-8882680 None:intergenic
TTAGTTATAGTGATGAAGGT+TGG 0.498885 4_4:+8880347 Msa0668000:five_prime_UTR
TGCTTCTGAATAAAGTCTAC+AGG 0.500632 4_4:-8883053 None:intergenic
AGGTCCTCAAAGACGCCGAC+TGG 0.502995 4_4:+8883491 Msa0668000:CDS
GAAATAAATGTGCCATTTGT+GGG 0.505338 4_4:-8882713 None:intergenic
TCTATTCATCCACATCCGTC+TGG 0.505373 4_4:+8881990 Msa0668000:five_prime_UTR
GTATAACAGAATAGGACATA+AGG 0.505635 4_4:+8882399 Msa0668000:five_prime_UTR
TGTGGAGTATAATTTAGTAT+TGG 0.505954 4_4:+8880261 Msa0668000:five_prime_UTR
TGATTGTGTCTGCAAAATCA+AGG 0.509387 4_4:+8882836 Msa0668000:five_prime_UTR
GAGTATAATTTAGTATTGGA+AGG 0.517079 4_4:+8880265 Msa0668000:five_prime_UTR
AAGTACACAATAACCAATGA+TGG 0.517361 4_4:-8881954 None:intergenic
TTATGCGAGTCTTCTTCGAC+AGG 0.520334 4_4:-8882163 None:intergenic
ATTGGTTATTGTGTACTTTG+GGG 0.522389 4_4:+8881959 Msa0668000:five_prime_UTR
ATGTCAAGGTCATTGACCTC+TGG 0.522967 4_4:+8883101 Msa0668000:CDS
TTGACAGCGGACAACAAAAT+GGG 0.526159 4_4:-8882492 None:intergenic
ATGGGCACTAACACATGCAT+TGG 0.527305 4_4:-8882662 None:intergenic
ATTGATTTCCAGTGTAGACA+TGG 0.528208 4_4:-8883517 Msa0668010:CDS
TGTGGAATTCAACCTTAAGA+TGG 0.529846 4_4:-8882070 None:intergenic
GAACCAAACAACACAATTTG+AGG 0.531325 4_4:-8880310 None:intergenic
ACATGAGGGTAGCAAGATAG+TGG 0.532909 4_4:+8883453 Msa0668000:CDS
AGTTATAGTGATGAAGGTTG+GGG 0.537356 4_4:+8880349 Msa0668000:five_prime_UTR
TAACGAGTGTCCCTGGGGAG+GGG 0.537449 4_4:-8883822 Msa0668010:intron
TTAACGAGTGTCCCTGGGGA+GGG 0.537844 4_4:-8883823 Msa0668010:intron
TGCATTTCCAAACCATCGAA+TGG 0.539312 4_4:+8883655 Msa0668000:CDS
TCTGGTCTGCACTTCAGCAA+AGG 0.543201 4_4:+8883119 Msa0668000:CDS
AATTGGTGATGACCATTCGA+TGG 0.544305 4_4:-8883667 Msa0668010:intron
AAATGTTAACGAGTGTCCCT+GGG 0.553629 4_4:-8883828 Msa0668010:intron
TGGAATTCATTTGTCACATG+AGG 0.558725 4_4:+8883438 Msa0668000:CDS
TACAAACTTGTATTCTCGCA+AGG 0.568561 4_4:+8880381 Msa0668000:five_prime_UTR
GGACCAAGTCCAGACGGATG+TGG 0.572184 4_4:-8881999 None:intergenic
ACTGGAACCCATGTCTACAC+TGG 0.576439 4_4:+8883509 Msa0668000:CDS
TTGGTTATTGTGTACTTTGG+GGG 0.579848 4_4:+8881960 Msa0668000:five_prime_UTR
AGTATAATTTAGTATTGGAA+GGG 0.581719 4_4:+8880266 Msa0668000:five_prime_UTR
TTAACGAGTGCCCCTCCCCA+GGG 0.584851 4_4:+8883812 Msa0668000:three_prime_UTR
ATATATTGGGACCACTAAAG+AGG 0.585513 4_4:+8883020 Msa0668000:five_prime_UTR
TGACCTTGACATTCATCTCA+TGG 0.586207 4_4:-8883090 None:intergenic
TAACGATGCATACCTTAACT+AGG 0.588636 4_4:+8882313 Msa0668000:five_prime_UTR
GCATCAACACTTTAGATCAA+AGG 0.591817 4_4:+8882550 Msa0668000:five_prime_UTR
GTATTGGAAGGGAAAATGGT+AGG 0.592463 4_4:+8880277 Msa0668000:five_prime_UTR
ATGTTTCTGGAAGTTCCAGT+TGG 0.594171 4_4:-8883611 Msa0668010:intron
TCTGGATACAATATTTCCCA+AGG 0.600454 4_4:+8881160 Msa0668000:five_prime_UTR
TGAGATATATTGGTCTTCAG+AGG 0.602803 4_4:+8882789 Msa0668000:five_prime_UTR
AGTGGTGAAAGAGATATTGA+AGG 0.604308 4_4:+8883471 Msa0668000:CDS
ACTATAACTAAGTTGAACAA+TGG 0.604564 4_4:-8880335 None:intergenic
GGAATTCATTTGTCACATGA+GGG 0.607224 4_4:+8883439 Msa0668000:CDS
CTAAAGTGTTGATGCTACGT+AGG 0.607676 4_4:-8882542 None:intergenic
TTGATTTCCAGTGTAGACAT+GGG 0.612254 4_4:-8883516 Msa0668010:CDS
GTTAACGAGTGTCCCTGGGG+AGG 0.623472 4_4:-8883824 Msa0668010:intron
ACCATAACAAGTGCATGCAA+AGG 0.629758 4_4:+8880192 Msa0668000:five_prime_UTR
AACCTGATATAACTTTCCAA+AGG 0.633858 4_4:-8883754 Msa0668010:intron
GTGTAGACATGGGTTCCAGT+CGG 0.639424 4_4:-8883506 Msa0668010:CDS
AAATAAATGTGCCATTTGTG+GGG 0.647352 4_4:-8882712 None:intergenic
ACATGAGGACCAAGTCCAGA+CGG 0.648484 4_4:-8882005 None:intergenic
TATTCTTCAAGGGGTACATG+AGG 0.652455 4_4:-8882020 None:intergenic
ATTTGCGCCTCGTTGACTGG+AGG 0.661668 4_4:-8882200 None:intergenic
TTTGCTGAAGTGCAGACCAG+AGG 0.667155 4_4:-8883117 None:intergenic
TCAGCTATCACAAACCAGCA+AGG 0.668167 4_4:+8883697 Msa0668000:CDS
TACTTACGTGAAGCAAACAT+CGG 0.669235 4_4:-8883152 None:intergenic
ACGACGCCCAAAAGCCCCAG+AGG 0.669953 4_4:-8882865 None:intergenic
CAGTTCTCCTCCAGTCAACG+AGG 0.676220 4_4:+8882193 Msa0668000:five_prime_UTR
GTAACTTTATGTGTCGACAT+CGG 0.679868 4_4:-8882584 None:intergenic
AATAAATGTGCCATTTGTGG+GGG 0.695017 4_4:-8882711 None:intergenic
GTGCCATGAGATGAATGTCA+AGG 0.722246 4_4:+8883087 Msa0668000:exon
AATGTTAACGAGTGTCCCTG+GGG 0.729430 4_4:-8883827 Msa0668010:intron
CCTAAGATAGTGTTTGACAG+CGG 0.757679 4_4:-8882505 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATTCAATTAATAGA+AGG + chr4_4:8880715-8880734 Msa0668000:intron 10.0%
!! AAAATGAATCTAAATTATTA+CGG - chr4_4:8881845-8881864 None:intergenic 10.0%
!!! ATATACTTTTTTTTAATGAA+AGG + chr4_4:8884177-8884196 Msa0668000:intron 10.0%
!!! TATACTTTTTTTTAATGAAA+GGG + chr4_4:8884178-8884197 Msa0668000:intron 10.0%
!! AAAATTATTAGAAAAACAAT+TGG + chr4_4:8884537-8884556 Msa0668000:intron 10.0%
!! TATTCATTATGATTAATTTA+TGG + chr4_4:8887686-8887705 Msa0668000:intron 10.0%
!!! ATTTCTTAAATTTTTAAAAC+AGG - chr4_4:8887823-8887842 None:intergenic 10.0%
!! AAAAATATTCAATTAATAGA+AGG + chr4_4:8880715-8880734 Msa0668000:intron 10.0%
!! AAAATGAATCTAAATTATTA+CGG - chr4_4:8881845-8881864 None:intergenic 10.0%
!!! ATATACTTTTTTTTAATGAA+AGG + chr4_4:8884177-8884196 Msa0668000:intron 10.0%
!!! TATACTTTTTTTTAATGAAA+GGG + chr4_4:8884178-8884197 Msa0668000:intron 10.0%
!! AAAATTATTAGAAAAACAAT+TGG + chr4_4:8884537-8884556 Msa0668000:intron 10.0%
!! TATTCATTATGATTAATTTA+TGG + chr4_4:8887686-8887705 Msa0668000:intron 10.0%
!!! ATTTCTTAAATTTTTAAAAC+AGG - chr4_4:8887823-8887842 None:intergenic 10.0%
!!! TATTTTCTTTTTAATCCAAA+AGG - chr4_4:8880679-8880698 None:intergenic 15.0%
!!! CAATTTTTTTGTCTAATTTA+TGG - chr4_4:8880798-8880817 None:intergenic 15.0%
!! CATAAATTAGACAAAAAAAT+TGG + chr4_4:8880796-8880815 Msa0668000:intron 15.0%
!! AAAATTGGAAATTTAATTGA+TGG + chr4_4:8880811-8880830 Msa0668000:intron 15.0%
!!! TTTTCATCATGATTAATTTA+TGG + chr4_4:8881256-8881275 Msa0668000:intron 15.0%
!! TAATTTATGGTAATTAATCA+AGG + chr4_4:8881269-8881288 Msa0668000:intron 15.0%
!! AATTACTTCAATTCTTAAAA+AGG - chr4_4:8881385-8881404 None:intergenic 15.0%
!!! TTAATTAATTTGAGTGATAT+TGG + chr4_4:8881607-8881626 Msa0668000:intron 15.0%
!! AAATTATTACGGTAAAATTA+GGG - chr4_4:8881834-8881853 None:intergenic 15.0%
!! TAAATTATTACGGTAAAATT+AGG - chr4_4:8881835-8881854 None:intergenic 15.0%
!!! TAATAAAAGTATAACAGAAT+AGG + chr4_4:8882391-8882410 Msa0668000:five_prime_UTR 15.0%
!! ATAATTTCAGAAAATGAAAA+TGG - chr4_4:8882616-8882635 None:intergenic 15.0%
!! TGTAAAAAGAAAATCAAAAT+TGG - chr4_4:8882933-8882952 None:intergenic 15.0%
!! AACTCTAATGAATAAATTAT+TGG + chr4_4:8882984-8883003 Msa0668000:five_prime_UTR 15.0%
!!! TTGTTTTGATACATTTTATA+GGG + chr4_4:8883414-8883433 Msa0668000:intron 15.0%
!! AAAAATATTTGAATTACCTT+TGG + chr4_4:8883738-8883757 Msa0668000:three_prime_UTR 15.0%
!!! GAAAATATATAATGGAATAT+AGG - chr4_4:8884622-8884641 None:intergenic 15.0%
!!! TAGATTGTTTTTGTTAATTA+TGG - chr4_4:8885120-8885139 None:intergenic 15.0%
!!! TCAAAATTTTACCTTTTTTT+TGG + chr4_4:8887496-8887515 Msa0668000:intron 15.0%
!! AATATTCATGCTTAATAAAA+AGG - chr4_4:8887657-8887676 None:intergenic 15.0%
!! CAAAATGAATCTAAATATTA+TGG - chr4_4:8887972-8887991 None:intergenic 15.0%
!!! CATAATATTTAGATTCATTT+TGG + chr4_4:8887970-8887989 Msa0668000:intron 15.0%
!! TAATTACATGAGATATATAT+TGG + chr4_4:8888494-8888513 Msa0668000:intron 15.0%
!!! AAAAGTATTTGAAATGATTT+TGG + chr4_4:8889604-8889623 Msa0668000:intron 15.0%
!!! AAAGTATTTGAAATGATTTT+GGG + chr4_4:8889605-8889624 Msa0668000:intron 15.0%
!!! TATTTTCTTTTTAATCCAAA+AGG - chr4_4:8880679-8880698 None:intergenic 15.0%
!!! CAATTTTTTTGTCTAATTTA+TGG - chr4_4:8880798-8880817 None:intergenic 15.0%
!! CATAAATTAGACAAAAAAAT+TGG + chr4_4:8880796-8880815 Msa0668000:intron 15.0%
!! AAAATTGGAAATTTAATTGA+TGG + chr4_4:8880811-8880830 Msa0668000:intron 15.0%
!!! TTTTCATCATGATTAATTTA+TGG + chr4_4:8881256-8881275 Msa0668000:intron 15.0%
!! TAATTTATGGTAATTAATCA+AGG + chr4_4:8881269-8881288 Msa0668000:intron 15.0%
!! AATTACTTCAATTCTTAAAA+AGG - chr4_4:8881385-8881404 None:intergenic 15.0%
!!! TTAATTAATTTGAGTGATAT+TGG + chr4_4:8881607-8881626 Msa0668000:intron 15.0%
!! AAATTATTACGGTAAAATTA+GGG - chr4_4:8881834-8881853 None:intergenic 15.0%
!! TAAATTATTACGGTAAAATT+AGG - chr4_4:8881835-8881854 None:intergenic 15.0%
!!! TAATAAAAGTATAACAGAAT+AGG + chr4_4:8882391-8882410 Msa0668000:five_prime_UTR 15.0%
!! ATAATTTCAGAAAATGAAAA+TGG - chr4_4:8882616-8882635 None:intergenic 15.0%
!! TGTAAAAAGAAAATCAAAAT+TGG - chr4_4:8882933-8882952 None:intergenic 15.0%
!! AACTCTAATGAATAAATTAT+TGG + chr4_4:8882984-8883003 Msa0668000:five_prime_UTR 15.0%
!!! TTGTTTTGATACATTTTATA+GGG + chr4_4:8883414-8883433 Msa0668000:intron 15.0%
!! AAAAATATTTGAATTACCTT+TGG + chr4_4:8883738-8883757 Msa0668000:three_prime_UTR 15.0%
!!! GAAAATATATAATGGAATAT+AGG - chr4_4:8884622-8884641 None:intergenic 15.0%
!!! TAGATTGTTTTTGTTAATTA+TGG - chr4_4:8885120-8885139 None:intergenic 15.0%
!!! TCAAAATTTTACCTTTTTTT+TGG + chr4_4:8887496-8887515 Msa0668000:intron 15.0%
!! AATATTCATGCTTAATAAAA+AGG - chr4_4:8887657-8887676 None:intergenic 15.0%
!! CAAAATGAATCTAAATATTA+TGG - chr4_4:8887972-8887991 None:intergenic 15.0%
!!! CATAATATTTAGATTCATTT+TGG + chr4_4:8887970-8887989 Msa0668000:intron 15.0%
!! TAATTACATGAGATATATAT+TGG + chr4_4:8888494-8888513 Msa0668000:intron 15.0%
!!! AAAAGTATTTGAAATGATTT+TGG + chr4_4:8889604-8889623 Msa0668000:intron 15.0%
!!! AAAGTATTTGAAATGATTTT+GGG + chr4_4:8889605-8889624 Msa0668000:intron 15.0%
!! ATGTTCTTAATTTATAGACT+TGG - chr4_4:8880240-8880259 None:intergenic 20.0%
!! CTATAAATTAAGAACATTTG+TGG + chr4_4:8880243-8880262 Msa0668000:five_prime_UTR 20.0%
!!! AGTATAATTTAGTATTGGAA+GGG + chr4_4:8880266-8880285 Msa0668000:five_prime_UTR 20.0%
!!! AAATAAAATTTGCTCTCTTT+TGG + chr4_4:8880473-8880492 Msa0668000:intron 20.0%
!! ATCATGAAAAAAAAAACTAC+AGG - chr4_4:8880532-8880551 None:intergenic 20.0%
!!! AAAAACAACTTGTTAACAAT+TGG - chr4_4:8880558-8880577 None:intergenic 20.0%
!! TATCTGAATCTTGATAAATA+TGG + chr4_4:8880845-8880864 Msa0668000:intron 20.0%
!!! ATTTCTCTATAGCATTTTTA+TGG + chr4_4:8881043-8881062 Msa0668000:intron 20.0%
!! AAGATTCATGCTTAATAAAA+TGG - chr4_4:8881236-8881255 None:intergenic 20.0%
!! TATATATGCAATATTGTTCA+AGG - chr4_4:8881327-8881346 None:intergenic 20.0%
!! ATTTCTATCTTTATATCCAA+CGG - chr4_4:8881738-8881757 None:intergenic 20.0%
!!! TCATTTTCTGAAATTATTAG+TGG + chr4_4:8882619-8882638 Msa0668000:five_prime_UTR 20.0%
!!! AATATATCTCATGTAACTTT+TGG - chr4_4:8882780-8882799 None:intergenic 20.0%
!! AAAAGTTACATGAGATATAT+TGG + chr4_4:8882779-8882798 Msa0668000:five_prime_UTR 20.0%
!! ACTTAAAGCAGTAATATATT+GGG + chr4_4:8883007-8883026 Msa0668000:five_prime_UTR 20.0%
!! AAAAATGTGATCAAAAAATG+CGG - chr4_4:8883314-8883333 None:intergenic 20.0%
!!! CTTGTTTTGATACATTTTAT+AGG + chr4_4:8883413-8883432 Msa0668000:intron 20.0%
!! CTAGAAATTTGAAAACTAAA+AGG - chr4_4:8883909-8883928 Msa0668010:intron 20.0%
!! TTATTAGAAAAACAATTGGA+CGG + chr4_4:8884541-8884560 Msa0668000:intron 20.0%
!! TTAAAAGAAAAGCTAGAATA+GGG - chr4_4:8884732-8884751 None:intergenic 20.0%
!! TTTAAAAGAAAAGCTAGAAT+AGG - chr4_4:8884733-8884752 None:intergenic 20.0%
!! TAATTAAGACAATTCTCATT+TGG + chr4_4:8884906-8884925 Msa0668000:intron 20.0%
!! AATTAAGACAATTCTCATTT+GGG + chr4_4:8884907-8884926 Msa0668000:intron 20.0%
!! TTTCATAAGATTTAAGAAAG+TGG + chr4_4:8885461-8885480 Msa0668000:intron 20.0%
!! AAACGAAAAAGAACAAAAAT+GGG + chr4_4:8885588-8885607 Msa0668000:intron 20.0%
!! TATTGAGTGATGTAATATTA+GGG - chr4_4:8885925-8885944 None:intergenic 20.0%
!! ATATTGAGTGATGTAATATT+AGG - chr4_4:8885926-8885945 None:intergenic 20.0%
!!! TGTTAAATTTTTCATCTTCT+CGG - chr4_4:8886089-8886108 None:intergenic 20.0%
!!! ACTTGATTTTTATATAGTGT+TGG + chr4_4:8886633-8886652 Msa0668000:intron 20.0%
!! CTTAGAATGTTAATTAAGTA+AGG + chr4_4:8886776-8886795 Msa0668000:intron 20.0%
!! TAATCCAAAAATAGAATCAT+TGG - chr4_4:8886920-8886939 None:intergenic 20.0%
!!! ATTTCTCTATAGCATTTTTA+TGG + chr4_4:8881043-8881062 Msa0668000:intron 20.0%
!! GATTAATTTATGGTTATTTG+TGG + chr4_4:8887696-8887715 Msa0668000:intron 20.0%
!! CTAAATATTATGGTAAAAGT+AGG - chr4_4:8887962-8887981 None:intergenic 20.0%
!!! AATAAAAAACAATGATAGTG+TGG - chr4_4:8888208-8888227 None:intergenic 20.0%
!! TAATGAAGCATAACTTATAT+AGG + chr4_4:8888431-8888450 Msa0668000:intron 20.0%
!! ATTGATATTGTAGAAAAATG+GGG - chr4_4:8888579-8888598 None:intergenic 20.0%
!! CATTGATATTGTAGAAAAAT+GGG - chr4_4:8888580-8888599 None:intergenic 20.0%
!! TCATTGATATTGTAGAAAAA+TGG - chr4_4:8888581-8888600 None:intergenic 20.0%
!!! AATAAGTTGTTCTAAAGAAA+AGG - chr4_4:8888634-8888653 None:intergenic 20.0%
!!! TTTTCTTTAGAACAACTTAT+TGG + chr4_4:8888633-8888652 Msa0668000:intron 20.0%
!! TACTTAAAGCAGTAATATAT+TGG + chr4_4:8888797-8888816 Msa0668000:intron 20.0%
!! ACTTAAAGCAGTAATATATT+GGG + chr4_4:8883007-8883026 Msa0668000:five_prime_UTR 20.0%
!! NNNNNNNNNNACCACTAAAG+AGG + chr4_4:8888911-8888930 Msa0668000:intron 20.0%
!!! TTTTTAAGACTTGTATGTAA+TGG - chr4_4:8889085-8889104 None:intergenic 20.0%
!! TACATACAAGTCTTAAAAAT+AGG + chr4_4:8889086-8889105 Msa0668000:intron 20.0%
!! AAAAATGTGGTTAAAAAATG+CGG - chr4_4:8889180-8889199 None:intergenic 20.0%
!! CTTAATACTATAGAAAAATG+TGG - chr4_4:8889193-8889212 None:intergenic 20.0%
!!! CACATTTTTCTATAGTATTA+AGG + chr4_4:8889191-8889210 Msa0668000:intron 20.0%
!! ATGTTCTTAATTTATAGACT+TGG - chr4_4:8880240-8880259 None:intergenic 20.0%
!! CTATAAATTAAGAACATTTG+TGG + chr4_4:8880243-8880262 Msa0668000:five_prime_UTR 20.0%
!!! AGTATAATTTAGTATTGGAA+GGG + chr4_4:8880266-8880285 Msa0668000:five_prime_UTR 20.0%
!!! AAATAAAATTTGCTCTCTTT+TGG + chr4_4:8880473-8880492 Msa0668000:intron 20.0%
!! ATCATGAAAAAAAAAACTAC+AGG - chr4_4:8880532-8880551 None:intergenic 20.0%
!!! AAAAACAACTTGTTAACAAT+TGG - chr4_4:8880558-8880577 None:intergenic 20.0%
!! TATCTGAATCTTGATAAATA+TGG + chr4_4:8880845-8880864 Msa0668000:intron 20.0%
!!! ATTTCTCTATAGCATTTTTA+TGG + chr4_4:8881043-8881062 Msa0668000:intron 20.0%
!! AAGATTCATGCTTAATAAAA+TGG - chr4_4:8881236-8881255 None:intergenic 20.0%
!! TATATATGCAATATTGTTCA+AGG - chr4_4:8881327-8881346 None:intergenic 20.0%
!! ATTTCTATCTTTATATCCAA+CGG - chr4_4:8881738-8881757 None:intergenic 20.0%
!!! TCATTTTCTGAAATTATTAG+TGG + chr4_4:8882619-8882638 Msa0668000:five_prime_UTR 20.0%
!!! AATATATCTCATGTAACTTT+TGG - chr4_4:8882780-8882799 None:intergenic 20.0%
!! AAAAGTTACATGAGATATAT+TGG + chr4_4:8882779-8882798 Msa0668000:five_prime_UTR 20.0%
!! ACTTAAAGCAGTAATATATT+GGG + chr4_4:8883007-8883026 Msa0668000:five_prime_UTR 20.0%
!! AAAAATGTGATCAAAAAATG+CGG - chr4_4:8883314-8883333 None:intergenic 20.0%
!!! CTTGTTTTGATACATTTTAT+AGG + chr4_4:8883413-8883432 Msa0668000:intron 20.0%
!! CTAGAAATTTGAAAACTAAA+AGG - chr4_4:8883909-8883928 Msa0668010:intron 20.0%
!! TTATTAGAAAAACAATTGGA+CGG + chr4_4:8884541-8884560 Msa0668000:intron 20.0%
!! TTAAAAGAAAAGCTAGAATA+GGG - chr4_4:8884732-8884751 None:intergenic 20.0%
!! TTTAAAAGAAAAGCTAGAAT+AGG - chr4_4:8884733-8884752 None:intergenic 20.0%
!! TAATTAAGACAATTCTCATT+TGG + chr4_4:8884906-8884925 Msa0668000:intron 20.0%
!! AATTAAGACAATTCTCATTT+GGG + chr4_4:8884907-8884926 Msa0668000:intron 20.0%
!! TTTCATAAGATTTAAGAAAG+TGG + chr4_4:8885461-8885480 Msa0668000:intron 20.0%
!! AAACGAAAAAGAACAAAAAT+GGG + chr4_4:8885588-8885607 Msa0668000:intron 20.0%
!! TATTGAGTGATGTAATATTA+GGG - chr4_4:8885925-8885944 None:intergenic 20.0%
!! ATATTGAGTGATGTAATATT+AGG - chr4_4:8885926-8885945 None:intergenic 20.0%
!!! TGTTAAATTTTTCATCTTCT+CGG - chr4_4:8886089-8886108 None:intergenic 20.0%
!!! ACTTGATTTTTATATAGTGT+TGG + chr4_4:8886633-8886652 Msa0668000:intron 20.0%
!! CTTAGAATGTTAATTAAGTA+AGG + chr4_4:8886776-8886795 Msa0668000:intron 20.0%
!! TAATCCAAAAATAGAATCAT+TGG - chr4_4:8886920-8886939 None:intergenic 20.0%
!!! ATTTCTCTATAGCATTTTTA+TGG + chr4_4:8881043-8881062 Msa0668000:intron 20.0%
!! GATTAATTTATGGTTATTTG+TGG + chr4_4:8887696-8887715 Msa0668000:intron 20.0%
!! CTAAATATTATGGTAAAAGT+AGG - chr4_4:8887962-8887981 None:intergenic 20.0%
!!! AATAAAAAACAATGATAGTG+TGG - chr4_4:8888208-8888227 None:intergenic 20.0%
!! TAATGAAGCATAACTTATAT+AGG + chr4_4:8888431-8888450 Msa0668000:intron 20.0%
!! ATTGATATTGTAGAAAAATG+GGG - chr4_4:8888579-8888598 None:intergenic 20.0%
!! CATTGATATTGTAGAAAAAT+GGG - chr4_4:8888580-8888599 None:intergenic 20.0%
!! TCATTGATATTGTAGAAAAA+TGG - chr4_4:8888581-8888600 None:intergenic 20.0%
!!! AATAAGTTGTTCTAAAGAAA+AGG - chr4_4:8888634-8888653 None:intergenic 20.0%
!!! TTTTCTTTAGAACAACTTAT+TGG + chr4_4:8888633-8888652 Msa0668000:intron 20.0%
!! TACTTAAAGCAGTAATATAT+TGG + chr4_4:8888797-8888816 Msa0668000:intron 20.0%
!! ACTTAAAGCAGTAATATATT+GGG + chr4_4:8883007-8883026 Msa0668000:five_prime_UTR 20.0%
!! NNNNNNNNNNACCACTAAAG+AGG + chr4_4:8888911-8888930 Msa0668000:intron 20.0%
!!! TTTTTAAGACTTGTATGTAA+TGG - chr4_4:8889085-8889104 None:intergenic 20.0%
!! TACATACAAGTCTTAAAAAT+AGG + chr4_4:8889086-8889105 Msa0668000:intron 20.0%
!! AAAAATGTGGTTAAAAAATG+CGG - chr4_4:8889180-8889199 None:intergenic 20.0%
!! CTTAATACTATAGAAAAATG+TGG - chr4_4:8889193-8889212 None:intergenic 20.0%
!!! CACATTTTTCTATAGTATTA+AGG + chr4_4:8889191-8889210 Msa0668000:intron 20.0%
! TGTGGAGTATAATTTAGTAT+TGG + chr4_4:8880261-8880280 Msa0668000:five_prime_UTR 25.0%
!! GAGTATAATTTAGTATTGGA+AGG + chr4_4:8880265-8880284 Msa0668000:five_prime_UTR 25.0%
!! ACTATAACTAAGTTGAACAA+TGG - chr4_4:8880338-8880357 None:intergenic 25.0%
! TTCACACATTAACTTTACAT+AGG + chr4_4:8881082-8881101 Msa0668000:intron 25.0%
!! GTAAAATTTTGAATCAACAC+AGG - chr4_4:8881214-8881233 None:intergenic 25.0%
!! TTAATTTGAGTGATATTGGA+CGG + chr4_4:8881611-8881630 Msa0668000:intron 25.0%
! AATAAGCGATATATAAGACT+TGG - chr4_4:8881659-8881678 None:intergenic 25.0%
! TGATTATTCCTCATACTTAA+AGG + chr4_4:8881882-8881901 Msa0668000:intron 25.0%
!! TTTAAGATCACAAAGCAAAA+TGG - chr4_4:8881914-8881933 None:intergenic 25.0%
!! ATTTTCTCTGTATTCTTCAA+GGG - chr4_4:8882033-8882052 None:intergenic 25.0%
!! TATTTTCTCTGTATTCTTCA+AGG - chr4_4:8882034-8882053 None:intergenic 25.0%
! GAAGATTATTATCCATCTTA+AGG + chr4_4:8882058-8882077 Msa0668000:five_prime_UTR 25.0%
!! AAAAAAAAACAGTGATAGTG+TGG - chr4_4:8882091-8882110 None:intergenic 25.0%
! CAATGTTTGACTAATTCTAA+TGG + chr4_4:8882131-8882150 Msa0668000:intron 25.0%
! AATCACATAGCATAAATAGA+AGG - chr4_4:8882290-8882309 None:intergenic 25.0%
!! ACAAAAGAGAATATGAGTTT+TGG + chr4_4:8882364-8882383 Msa0668000:five_prime_UTR 25.0%
! TAGGACATAAGGTAAAAAAA+TGG + chr4_4:8882410-8882429 Msa0668000:five_prime_UTR 25.0%
!! GGTAAAAAAATGGTACATTT+TGG + chr4_4:8882420-8882439 Msa0668000:five_prime_UTR 25.0%
! ACATAAAGGTTATAAGCAAT+GGG - chr4_4:8882683-8882702 None:intergenic 25.0%
! AACATAAAGGTTATAAGCAA+TGG - chr4_4:8882684-8882703 None:intergenic 25.0%
! GACTTAAAGCAGTAATATAT+TGG + chr4_4:8883006-8883025 Msa0668000:five_prime_UTR 25.0%
! TTACATACAAGTCTTCAAAT+AGG + chr4_4:8883194-8883213 Msa0668000:intron 25.0%
! AATTGCTGATCCAAAAAATA+CGG - chr4_4:8883269-8883288 None:intergenic 25.0%
!! TTTGATACATTTTATAGGGA+TGG + chr4_4:8883418-8883437 Msa0668000:intron 25.0%
! ATGGTAAAAGAGTTCTTAAA+TGG + chr4_4:8884119-8884138 Msa0668000:intron 25.0%
! ACAAATTATAACGCAAGTTT+AGG - chr4_4:8884374-8884393 Msa0668010:CDS 25.0%
!! ATATAATGGAATATAGGACT+GGG - chr4_4:8884616-8884635 None:intergenic 25.0%
!! TATATAATGGAATATAGGAC+TGG - chr4_4:8884617-8884636 None:intergenic 25.0%
! TAAAAGAAAAGCTAGAATAG+GGG - chr4_4:8884731-8884750 None:intergenic 25.0%
!!! AATGAGTTTTAAGTACAATG+TGG - chr4_4:8885004-8885023 None:intergenic 25.0%
!!! TAATACTACTTGTGTTTTTG+TGG + chr4_4:8885169-8885188 Msa0668000:intron 25.0%
! GTTGTTGATACATTAAAGAA+AGG - chr4_4:8885438-8885457 None:intergenic 25.0%
! GTTGGAAGAAAGAATAATTA+CGG - chr4_4:8885490-8885509 None:intergenic 25.0%
!!! TTGTTCTTTTTCGTTTCTTA+GGG - chr4_4:8885584-8885603 None:intergenic 25.0%
!!! TTTGTTCTTTTTCGTTTCTT+AGG - chr4_4:8885585-8885604 None:intergenic 25.0%
! GAAACGAAAAAGAACAAAAA+TGG + chr4_4:8885587-8885606 Msa0668000:intron 25.0%
! AAATTTACCAGAGGATTTAT+GGG + chr4_4:8885635-8885654 Msa0668000:intron 25.0%
!! ACAAAAACTAATTTGCACAA+CGG + chr4_4:8886479-8886498 Msa0668000:intron 25.0%
!! TTTTCTTGTAGAACAAATAG+AGG + chr4_4:8886546-8886565 Msa0668000:intron 25.0%
! CATTAATTTAAAAGATAGCC+AGG - chr4_4:8886834-8886853 None:intergenic 25.0%
! ATGATATGTGAATTTCTTGA+TGG + chr4_4:8886874-8886893 Msa0668000:intron 25.0%
! ATAATTGAGCCGTATAAATT+AGG + chr4_4:8887060-8887079 Msa0668000:intron 25.0%
! CATTCTTTGCCTAATTTATA+CGG - chr4_4:8887072-8887091 None:intergenic 25.0%
! TATATAACAAAACTATAGCG+TGG - chr4_4:8880988-8881007 None:intergenic 25.0%
! TTCACACATTAACATTACAT+AGG + chr4_4:8887356-8887375 Msa0668000:intron 25.0%
!! GTAAAATTTTGAATCAACAC+AGG - chr4_4:8881214-8881233 None:intergenic 25.0%
! ATATTATGGTAAAAGTAGGA+GGG - chr4_4:8887958-8887977 None:intergenic 25.0%
! AATATTATGGTAAAAGTAGG+AGG - chr4_4:8887959-8887978 None:intergenic 25.0%
!! ATTTTCTCTGTATTCTTCAA+GGG - chr4_4:8882033-8882052 None:intergenic 25.0%
!! TATTTTCTCTGTATTCTTCA+AGG - chr4_4:8882034-8882053 None:intergenic 25.0%
! GAAGATTATTATCCATCTTA+AGG + chr4_4:8882058-8882077 Msa0668000:five_prime_UTR 25.0%
! CAATGTTTGACTAATCTTAA+TGG + chr4_4:8888249-8888268 Msa0668000:intron 25.0%
! AATCACACAGCATATATAAA+AGG - chr4_4:8888408-8888427 None:intergenic 25.0%
!! ATCACATGTGTCTTATTAAA+AGG + chr4_4:8889250-8889269 Msa0668000:intron 25.0%
!! TTGTCTTGATACGTTTTATA+GGG + chr4_4:8889280-8889299 Msa0668000:intron 25.0%
!!! TTTTGGGAAAAAGTTATATC+AGG + chr4_4:8889621-8889640 Msa0668000:three_prime_UTR 25.0%
! TGTGGAGTATAATTTAGTAT+TGG + chr4_4:8880261-8880280 Msa0668000:five_prime_UTR 25.0%
!! GAGTATAATTTAGTATTGGA+AGG + chr4_4:8880265-8880284 Msa0668000:five_prime_UTR 25.0%
!! ACTATAACTAAGTTGAACAA+TGG - chr4_4:8880338-8880357 None:intergenic 25.0%
! TTCACACATTAACTTTACAT+AGG + chr4_4:8881082-8881101 Msa0668000:intron 25.0%
!! GTAAAATTTTGAATCAACAC+AGG - chr4_4:8881214-8881233 None:intergenic 25.0%
!! TTAATTTGAGTGATATTGGA+CGG + chr4_4:8881611-8881630 Msa0668000:intron 25.0%
! AATAAGCGATATATAAGACT+TGG - chr4_4:8881659-8881678 None:intergenic 25.0%
! TGATTATTCCTCATACTTAA+AGG + chr4_4:8881882-8881901 Msa0668000:intron 25.0%
!! TTTAAGATCACAAAGCAAAA+TGG - chr4_4:8881914-8881933 None:intergenic 25.0%
!! ATTTTCTCTGTATTCTTCAA+GGG - chr4_4:8882033-8882052 None:intergenic 25.0%
!! TATTTTCTCTGTATTCTTCA+AGG - chr4_4:8882034-8882053 None:intergenic 25.0%
! GAAGATTATTATCCATCTTA+AGG + chr4_4:8882058-8882077 Msa0668000:five_prime_UTR 25.0%
!! AAAAAAAAACAGTGATAGTG+TGG - chr4_4:8882091-8882110 None:intergenic 25.0%
! CAATGTTTGACTAATTCTAA+TGG + chr4_4:8882131-8882150 Msa0668000:intron 25.0%
! AATCACATAGCATAAATAGA+AGG - chr4_4:8882290-8882309 None:intergenic 25.0%
!! ACAAAAGAGAATATGAGTTT+TGG + chr4_4:8882364-8882383 Msa0668000:five_prime_UTR 25.0%
! TAGGACATAAGGTAAAAAAA+TGG + chr4_4:8882410-8882429 Msa0668000:five_prime_UTR 25.0%
!! GGTAAAAAAATGGTACATTT+TGG + chr4_4:8882420-8882439 Msa0668000:five_prime_UTR 25.0%
! ACATAAAGGTTATAAGCAAT+GGG - chr4_4:8882683-8882702 None:intergenic 25.0%
! AACATAAAGGTTATAAGCAA+TGG - chr4_4:8882684-8882703 None:intergenic 25.0%
! GACTTAAAGCAGTAATATAT+TGG + chr4_4:8883006-8883025 Msa0668000:five_prime_UTR 25.0%
! TTACATACAAGTCTTCAAAT+AGG + chr4_4:8883194-8883213 Msa0668000:intron 25.0%
! AATTGCTGATCCAAAAAATA+CGG - chr4_4:8883269-8883288 None:intergenic 25.0%
!! TTTGATACATTTTATAGGGA+TGG + chr4_4:8883418-8883437 Msa0668000:intron 25.0%
! ATGGTAAAAGAGTTCTTAAA+TGG + chr4_4:8884119-8884138 Msa0668000:intron 25.0%
! ACAAATTATAACGCAAGTTT+AGG - chr4_4:8884374-8884393 Msa0668010:CDS 25.0%
!! ATATAATGGAATATAGGACT+GGG - chr4_4:8884616-8884635 None:intergenic 25.0%
!! TATATAATGGAATATAGGAC+TGG - chr4_4:8884617-8884636 None:intergenic 25.0%
! TAAAAGAAAAGCTAGAATAG+GGG - chr4_4:8884731-8884750 None:intergenic 25.0%
!!! AATGAGTTTTAAGTACAATG+TGG - chr4_4:8885004-8885023 None:intergenic 25.0%
!!! TAATACTACTTGTGTTTTTG+TGG + chr4_4:8885169-8885188 Msa0668000:intron 25.0%
! GTTGTTGATACATTAAAGAA+AGG - chr4_4:8885438-8885457 None:intergenic 25.0%
! GTTGGAAGAAAGAATAATTA+CGG - chr4_4:8885490-8885509 None:intergenic 25.0%
!!! TTGTTCTTTTTCGTTTCTTA+GGG - chr4_4:8885584-8885603 None:intergenic 25.0%
!!! TTTGTTCTTTTTCGTTTCTT+AGG - chr4_4:8885585-8885604 None:intergenic 25.0%
! GAAACGAAAAAGAACAAAAA+TGG + chr4_4:8885587-8885606 Msa0668000:intron 25.0%
! AAATTTACCAGAGGATTTAT+GGG + chr4_4:8885635-8885654 Msa0668000:intron 25.0%
!! ACAAAAACTAATTTGCACAA+CGG + chr4_4:8886479-8886498 Msa0668000:intron 25.0%
!! TTTTCTTGTAGAACAAATAG+AGG + chr4_4:8886546-8886565 Msa0668000:intron 25.0%
! CATTAATTTAAAAGATAGCC+AGG - chr4_4:8886834-8886853 None:intergenic 25.0%
! ATGATATGTGAATTTCTTGA+TGG + chr4_4:8886874-8886893 Msa0668000:intron 25.0%
! ATAATTGAGCCGTATAAATT+AGG + chr4_4:8887060-8887079 Msa0668000:intron 25.0%
! CATTCTTTGCCTAATTTATA+CGG - chr4_4:8887072-8887091 None:intergenic 25.0%
! TATATAACAAAACTATAGCG+TGG - chr4_4:8880988-8881007 None:intergenic 25.0%
! TTCACACATTAACATTACAT+AGG + chr4_4:8887356-8887375 Msa0668000:intron 25.0%
!! GTAAAATTTTGAATCAACAC+AGG - chr4_4:8881214-8881233 None:intergenic 25.0%
! ATATTATGGTAAAAGTAGGA+GGG - chr4_4:8887958-8887977 None:intergenic 25.0%
! AATATTATGGTAAAAGTAGG+AGG - chr4_4:8887959-8887978 None:intergenic 25.0%
!! ATTTTCTCTGTATTCTTCAA+GGG - chr4_4:8882033-8882052 None:intergenic 25.0%
!! TATTTTCTCTGTATTCTTCA+AGG - chr4_4:8882034-8882053 None:intergenic 25.0%
! GAAGATTATTATCCATCTTA+AGG + chr4_4:8882058-8882077 Msa0668000:five_prime_UTR 25.0%
! CAATGTTTGACTAATCTTAA+TGG + chr4_4:8888249-8888268 Msa0668000:intron 25.0%
! AATCACACAGCATATATAAA+AGG - chr4_4:8888408-8888427 None:intergenic 25.0%
!! ATCACATGTGTCTTATTAAA+AGG + chr4_4:8889250-8889269 Msa0668000:intron 25.0%
!! TTGTCTTGATACGTTTTATA+GGG + chr4_4:8889280-8889299 Msa0668000:intron 25.0%
!!! TTTTGGGAAAAAGTTATATC+AGG + chr4_4:8889621-8889640 Msa0668000:three_prime_UTR 25.0%
! TTTAGTATTGGAAGGGAAAA+TGG + chr4_4:8880273-8880292 Msa0668000:five_prime_UTR 30.0%
CAACTTAGTTATAGTGATGA+AGG + chr4_4:8880343-8880362 Msa0668000:five_prime_UTR 30.0%
TTAGTTATAGTGATGAAGGT+TGG + chr4_4:8880347-8880366 Msa0668000:five_prime_UTR 30.0%
TAGTTATAGTGATGAAGGTT+GGG + chr4_4:8880348-8880367 Msa0668000:five_prime_UTR 30.0%
! GTTTTTCTCAATAGAGAACT+TGG + chr4_4:8880572-8880591 Msa0668000:intron 30.0%
GAACTTGGTATTGTGAATTA+TGG + chr4_4:8880587-8880606 Msa0668000:intron 30.0%
ATTCAATTAATAGAAGGCAG+TGG + chr4_4:8880721-8880740 Msa0668000:intron 30.0%
!! GTGTTGAGAACATTTTAAGT+AGG + chr4_4:8880749-8880768 Msa0668000:intron 30.0%
!! TTGAGAACATTTTAAGTAGG+TGG + chr4_4:8880752-8880771 Msa0668000:intron 30.0%
TTATGGTCCAGTTATATTAG+AGG - chr4_4:8880781-8880800 None:intergenic 30.0%
ATAACAAAACTATAGCGTAG+TGG - chr4_4:8880985-8881004 None:intergenic 30.0%
GTGTGAAAAGTTAAACTCAT+TGG - chr4_4:8881069-8881088 None:intergenic 30.0%
! TAGGCAGATATAATTTTGAG+AGG + chr4_4:8881101-8881120 Msa0668000:intron 30.0%
!! ATAATTTTGAGAGGATACTG+TGG + chr4_4:8881110-8881129 Msa0668000:five_prime_UTR 30.0%
ACACAAATGATCAATACCTT+GGG - chr4_4:8881179-8881198 None:intergenic 30.0%
AACACAAATGATCAATACCT+TGG - chr4_4:8881180-8881199 None:intergenic 30.0%
TTATGGTAATTAATCAAGGC+TGG + chr4_4:8881273-8881292 Msa0668000:intron 30.0%
AACAAAATCTTAGCCGTTAA+CGG + chr4_4:8881562-8881581 Msa0668000:intron 30.0%
TAATTTGAGTGATATTGGAC+GGG + chr4_4:8881612-8881631 Msa0668000:intron 30.0%
TATTACGGTAAAATTAGGGA+GGG - chr4_4:8881830-8881849 None:intergenic 30.0%
TTATTACGGTAAAATTAGGG+AGG - chr4_4:8881831-8881850 None:intergenic 30.0%
AAGTACACAATAACCAATGA+TGG - chr4_4:8881957-8881976 None:intergenic 30.0%
! TCATTGGTTATTGTGTACTT+TGG + chr4_4:8881957-8881976 Msa0668000:five_prime_UTR 30.0%
! CATTGGTTATTGTGTACTTT+GGG + chr4_4:8881958-8881977 Msa0668000:five_prime_UTR 30.0%
ATTGGTTATTGTGTACTTTG+GGG + chr4_4:8881959-8881978 Msa0668000:five_prime_UTR 30.0%
! TTTTCTCTGTATTCTTCAAG+GGG - chr4_4:8882032-8882051 None:intergenic 30.0%
CGCAAATTCATTAAACTTTC+AGG + chr4_4:8882216-8882235 Msa0668000:five_prime_UTR 30.0%
TGTTAAATGGTACCTAGTTA+AGG - chr4_4:8882328-8882347 None:intergenic 30.0%
! GTTCTAACCTGTTTGTTAAA+TGG - chr4_4:8882341-8882360 None:intergenic 30.0%
GTATAACAGAATAGGACATA+AGG + chr4_4:8882399-8882418 Msa0668000:five_prime_UTR 30.0%
TTGGTTTCACAAAAAAACGA+TGG + chr4_4:8882439-8882458 Msa0668000:five_prime_UTR 30.0%
!! AAATAAATGTGCCATTTGTG+GGG - chr4_4:8882715-8882734 None:intergenic 30.0%
!! GAAATAAATGTGCCATTTGT+GGG - chr4_4:8882716-8882735 None:intergenic 30.0%
!! TGAAATAAATGTGCCATTTG+TGG - chr4_4:8882717-8882736 None:intergenic 30.0%
! ACTTTATTCAGAAGCATGTT+TGG + chr4_4:8883060-8883079 Msa0668000:five_prime_UTR 30.0%
! GTTTTTACAGCCGTATTTTT+TGG + chr4_4:8883256-8883275 Msa0668000:intron 30.0%
! TTTTGGATCAGCAATTAAGT+TGG + chr4_4:8883273-8883292 Msa0668000:intron 30.0%
! ACATTTTTCTACAGCGTTAA+GGG + chr4_4:8883326-8883345 Msa0668000:intron 30.0%
!! AAAGTTCTAAAACACAACTG+TGG - chr4_4:8883363-8883382 None:intergenic 30.0%
!!! ACAGTTGTGTTTTAGAACTT+TGG + chr4_4:8883362-8883381 Msa0668000:intron 30.0%
! GTCACATGTGTCTTATTAAA+AGG + chr4_4:8883384-8883403 Msa0668000:intron 30.0%
GAATCTTCAGCAAATTCATT+TGG - chr4_4:8883544-8883563 Msa0668010:CDS 30.0%
! ACTTCCAGAAACATTTTGAA+TGG + chr4_4:8883620-8883639 Msa0668000:CDS 30.0%
! CTTCCAGAAACATTTTGAAT+GGG + chr4_4:8883621-8883640 Msa0668000:CDS 30.0%
TTTCCCATTCAAAATGTTTC+TGG - chr4_4:8883627-8883646 Msa0668010:intron 30.0%
! TGATAGCTGATTCTTCAAAT+TGG - chr4_4:8883687-8883706 Msa0668010:intron 30.0%
! TACCTTTGGAAAGTTATATC+AGG + chr4_4:8883752-8883771 Msa0668000:three_prime_UTR 30.0%
AACCTGATATAACTTTCCAA+AGG - chr4_4:8883757-8883776 Msa0668010:intron 30.0%
! TTCGACTAGTTCCAATTTAT+TGG - chr4_4:8884069-8884088 Msa0668010:intron 30.0%
! TAAGAACTCTTTTACCATTG+CGG - chr4_4:8884117-8884136 Msa0668010:intron 30.0%
GGAATGTTCGAGTATTTATT+AGG - chr4_4:8884204-8884223 Msa0668010:intron 30.0%
GAATGAAAAAACATCCTATG+AGG - chr4_4:8884324-8884343 Msa0668010:CDS 30.0%
AACGCAAGTTTAGGTAATTT+GGG - chr4_4:8884365-8884384 Msa0668010:CDS 30.0%
TAACGCAAGTTTAGGTAATT+TGG - chr4_4:8884366-8884385 Msa0668010:CDS 30.0%
!! GCATTATATTGCTAGCTTTA+AGG + chr4_4:8884399-8884418 Msa0668000:intron 30.0%
AAGCACTTATAAGCTAGAAT+AGG - chr4_4:8884765-8884784 None:intergenic 30.0%
!!! AAGTACAATGTGGTTTTGAA+TGG - chr4_4:8884994-8885013 None:intergenic 30.0%
GTTGATACATTAAAGAAAGG+TGG - chr4_4:8885435-8885454 None:intergenic 30.0%
! TTTTTGAACCATGAAGAGAA+TGG - chr4_4:8885515-8885534 None:intergenic 30.0%
TCTTCATGGTTCAAAAACAA+TGG + chr4_4:8885518-8885537 Msa0668000:intron 30.0%
AACACATTCAAATTTACCAG+AGG + chr4_4:8885626-8885645 Msa0668000:intron 30.0%
CAAATTTACCAGAGGATTTA+TGG + chr4_4:8885634-8885653 Msa0668000:intron 30.0%
! AGAGAGATTTTATTCTTCGA+GGG - chr4_4:8885745-8885764 None:intergenic 30.0%
! TAGAGAGATTTTATTCTTCG+AGG - chr4_4:8885746-8885765 None:intergenic 30.0%
!! TGATTGATTTGAGGTCTAAA+GGG - chr4_4:8886018-8886037 None:intergenic 30.0%
ACTATCTATGGCACAATTAT+GGG - chr4_4:8886218-8886237 None:intergenic 30.0%
GAATTGATCATCACTATCTA+TGG - chr4_4:8886230-8886249 None:intergenic 30.0%
AGATAGTGATGATCAATTCT+TGG + chr4_4:8886231-8886250 Msa0668000:intron 30.0%
!!! TGCAAATTAGTTTTTGTAGC+AGG - chr4_4:8886476-8886495 None:intergenic 30.0%
!! CAAATAGAGGTATTCAAGTA+AGG + chr4_4:8886559-8886578 Msa0668000:intron 30.0%
TTACTACTTCAGATGATCTA+AGG + chr4_4:8886674-8886693 Msa0668000:intron 30.0%
TCATCTTGTATAAACAATCC+TGG + chr4_4:8886813-8886832 Msa0668000:intron 30.0%
TCCAAAAATAGAATCATTGG+AGG - chr4_4:8886917-8886936 None:intergenic 30.0%
ATTCAATCAATAGAAAGCAG+TGG + chr4_4:8886994-8887013 Msa0668000:intron 30.0%
!! GTGTTGAGAACATTTTAAGT+TGG + chr4_4:8880749-8880768 Msa0668000:intron 30.0%
!!! TTGAGAACATTTTAAGTTGG+TGG + chr4_4:8887025-8887044 Msa0668000:intron 30.0%
ATACGGCTCAATTATATTAC+AGG - chr4_4:8887055-8887074 None:intergenic 30.0%
CGTATAAATTAGGCAAAGAA+TGG + chr4_4:8887070-8887089 Msa0668000:intron 30.0%
AAGAATGGAGATTTCATTGA+TGG + chr4_4:8887085-8887104 Msa0668000:intron 30.0%
TCTCTGAATCTAGATCAATA+TGG + chr4_4:8887119-8887138 Msa0668000:intron 30.0%
GTGTGAAAAGTTAAACTCAT+TGG - chr4_4:8881069-8881088 None:intergenic 30.0%
! TAGGCAGATATAATTTTGAG+AGG + chr4_4:8881101-8881120 Msa0668000:intron 30.0%
!! ATAATTTTGAGAGGATACTG+TGG + chr4_4:8881110-8881129 Msa0668000:five_prime_UTR 30.0%
TTTGGATACAATATTTCCCA+AGG + chr4_4:8887434-8887453 Msa0668000:intron 30.0%
ACACAAATGATCAATACCTT+GGG - chr4_4:8881179-8881198 None:intergenic 30.0%
AACACAAATGATCAATACCT+TGG - chr4_4:8881180-8881199 None:intergenic 30.0%
GAACTCACACAATTTAATTG+TGG + chr4_4:8887538-8887557 Msa0668000:intron 30.0%
ACAATTTAATTGTGGAGAAG+TGG + chr4_4:8887546-8887565 Msa0668000:intron 30.0%
CAATTTAATTGTGGAGAAGT+GGG + chr4_4:8887547-8887566 Msa0668000:intron 30.0%
AATTTAATTGTGGAGAAGTG+GGG + chr4_4:8887548-8887567 Msa0668000:intron 30.0%
ATACTGCATATTATATGCAG+GGG - chr4_4:8887594-8887613 None:intergenic 30.0%
GATACTGCATATTATATGCA+GGG - chr4_4:8887595-8887614 None:intergenic 30.0%
GTTATTTGTGGATGTATTCA+GGG + chr4_4:8887708-8887727 Msa0668000:intron 30.0%
TATATGTGCAAGATTGTTCA+AGG - chr4_4:8887766-8887785 None:intergenic 30.0%
TGATTATTCCTCATACCTAA+AGG + chr4_4:8888008-8888027 Msa0668000:intron 30.0%
TTGAAGATCACAAAGCAAAA+TGG - chr4_4:8888040-8888059 None:intergenic 30.0%
AAATACACGATAACCAATGA+TGG - chr4_4:8888083-8888102 None:intergenic 30.0%
!! TCATTGGTTATCGTGTATTT+TGG + chr4_4:8888083-8888102 Msa0668000:intron 30.0%
! TTTTCTCTGTATTCTTCAAG+GGG - chr4_4:8882032-8882051 None:intergenic 30.0%
GTTCAAACATTTCTGCTAAA+TGG - chr4_4:8888459-8888478 None:intergenic 30.0%
CAGAAATGTTTGAACAATTG+TGG + chr4_4:8888464-8888483 Msa0668000:intron 30.0%
!! AGATATATATTGGTCTTCAG+AGG + chr4_4:8888504-8888523 Msa0668000:intron 30.0%
! ACTTTATTCAGAAGCATGTT+TGG + chr4_4:8883060-8883079 Msa0668000:five_prime_UTR 30.0%
GCGGTAAAATAATGCTTATA+CGG - chr4_4:8889161-8889180 None:intergenic 30.0%
!! ATAGTTCTAAATCACAACTG+TGG - chr4_4:8889229-8889248 None:intergenic 30.0%
! CTTGTCTTGATACGTTTTAT+AGG + chr4_4:8889279-8889298 Msa0668000:intron 30.0%
! ACTTCCAGAAACATTTTGAA+TGG + chr4_4:8883620-8883639 Msa0668000:CDS 30.0%
! CTTCCAGAAACATTTTGAAT+GGG + chr4_4:8883621-8883640 Msa0668000:CDS 30.0%
TTTCCCATTCAAAATGTTTC+TGG - chr4_4:8883627-8883646 Msa0668010:intron 30.0%
! TTTAGTATTGGAAGGGAAAA+TGG + chr4_4:8880273-8880292 Msa0668000:five_prime_UTR 30.0%
CAACTTAGTTATAGTGATGA+AGG + chr4_4:8880343-8880362 Msa0668000:five_prime_UTR 30.0%
TTAGTTATAGTGATGAAGGT+TGG + chr4_4:8880347-8880366 Msa0668000:five_prime_UTR 30.0%
TAGTTATAGTGATGAAGGTT+GGG + chr4_4:8880348-8880367 Msa0668000:five_prime_UTR 30.0%
! GTTTTTCTCAATAGAGAACT+TGG + chr4_4:8880572-8880591 Msa0668000:intron 30.0%
GAACTTGGTATTGTGAATTA+TGG + chr4_4:8880587-8880606 Msa0668000:intron 30.0%
ATTCAATTAATAGAAGGCAG+TGG + chr4_4:8880721-8880740 Msa0668000:intron 30.0%
!! GTGTTGAGAACATTTTAAGT+AGG + chr4_4:8880749-8880768 Msa0668000:intron 30.0%
!! TTGAGAACATTTTAAGTAGG+TGG + chr4_4:8880752-8880771 Msa0668000:intron 30.0%
TTATGGTCCAGTTATATTAG+AGG - chr4_4:8880781-8880800 None:intergenic 30.0%
ATAACAAAACTATAGCGTAG+TGG - chr4_4:8880985-8881004 None:intergenic 30.0%
GTGTGAAAAGTTAAACTCAT+TGG - chr4_4:8881069-8881088 None:intergenic 30.0%
! TAGGCAGATATAATTTTGAG+AGG + chr4_4:8881101-8881120 Msa0668000:intron 30.0%
!! ATAATTTTGAGAGGATACTG+TGG + chr4_4:8881110-8881129 Msa0668000:five_prime_UTR 30.0%
ACACAAATGATCAATACCTT+GGG - chr4_4:8881179-8881198 None:intergenic 30.0%
AACACAAATGATCAATACCT+TGG - chr4_4:8881180-8881199 None:intergenic 30.0%
TTATGGTAATTAATCAAGGC+TGG + chr4_4:8881273-8881292 Msa0668000:intron 30.0%
AACAAAATCTTAGCCGTTAA+CGG + chr4_4:8881562-8881581 Msa0668000:intron 30.0%
TAATTTGAGTGATATTGGAC+GGG + chr4_4:8881612-8881631 Msa0668000:intron 30.0%
TATTACGGTAAAATTAGGGA+GGG - chr4_4:8881830-8881849 None:intergenic 30.0%
TTATTACGGTAAAATTAGGG+AGG - chr4_4:8881831-8881850 None:intergenic 30.0%
AAGTACACAATAACCAATGA+TGG - chr4_4:8881957-8881976 None:intergenic 30.0%
! TCATTGGTTATTGTGTACTT+TGG + chr4_4:8881957-8881976 Msa0668000:five_prime_UTR 30.0%
! CATTGGTTATTGTGTACTTT+GGG + chr4_4:8881958-8881977 Msa0668000:five_prime_UTR 30.0%
ATTGGTTATTGTGTACTTTG+GGG + chr4_4:8881959-8881978 Msa0668000:five_prime_UTR 30.0%
! TTTTCTCTGTATTCTTCAAG+GGG - chr4_4:8882032-8882051 None:intergenic 30.0%
CGCAAATTCATTAAACTTTC+AGG + chr4_4:8882216-8882235 Msa0668000:five_prime_UTR 30.0%
TGTTAAATGGTACCTAGTTA+AGG - chr4_4:8882328-8882347 None:intergenic 30.0%
! GTTCTAACCTGTTTGTTAAA+TGG - chr4_4:8882341-8882360 None:intergenic 30.0%
GTATAACAGAATAGGACATA+AGG + chr4_4:8882399-8882418 Msa0668000:five_prime_UTR 30.0%
TTGGTTTCACAAAAAAACGA+TGG + chr4_4:8882439-8882458 Msa0668000:five_prime_UTR 30.0%
!! AAATAAATGTGCCATTTGTG+GGG - chr4_4:8882715-8882734 None:intergenic 30.0%
!! GAAATAAATGTGCCATTTGT+GGG - chr4_4:8882716-8882735 None:intergenic 30.0%
!! TGAAATAAATGTGCCATTTG+TGG - chr4_4:8882717-8882736 None:intergenic 30.0%
! ACTTTATTCAGAAGCATGTT+TGG + chr4_4:8883060-8883079 Msa0668000:five_prime_UTR 30.0%
! GTTTTTACAGCCGTATTTTT+TGG + chr4_4:8883256-8883275 Msa0668000:intron 30.0%
! TTTTGGATCAGCAATTAAGT+TGG + chr4_4:8883273-8883292 Msa0668000:intron 30.0%
! ACATTTTTCTACAGCGTTAA+GGG + chr4_4:8883326-8883345 Msa0668000:intron 30.0%
!! AAAGTTCTAAAACACAACTG+TGG - chr4_4:8883363-8883382 None:intergenic 30.0%
!!! ACAGTTGTGTTTTAGAACTT+TGG + chr4_4:8883362-8883381 Msa0668000:intron 30.0%
! GTCACATGTGTCTTATTAAA+AGG + chr4_4:8883384-8883403 Msa0668000:intron 30.0%
GAATCTTCAGCAAATTCATT+TGG - chr4_4:8883544-8883563 Msa0668010:CDS 30.0%
! ACTTCCAGAAACATTTTGAA+TGG + chr4_4:8883620-8883639 Msa0668000:CDS 30.0%
! CTTCCAGAAACATTTTGAAT+GGG + chr4_4:8883621-8883640 Msa0668000:CDS 30.0%
TTTCCCATTCAAAATGTTTC+TGG - chr4_4:8883627-8883646 Msa0668010:intron 30.0%
! TGATAGCTGATTCTTCAAAT+TGG - chr4_4:8883687-8883706 Msa0668010:intron 30.0%
! TACCTTTGGAAAGTTATATC+AGG + chr4_4:8883752-8883771 Msa0668000:three_prime_UTR 30.0%
AACCTGATATAACTTTCCAA+AGG - chr4_4:8883757-8883776 Msa0668010:intron 30.0%
! TTCGACTAGTTCCAATTTAT+TGG - chr4_4:8884069-8884088 Msa0668010:intron 30.0%
! TAAGAACTCTTTTACCATTG+CGG - chr4_4:8884117-8884136 Msa0668010:intron 30.0%
GGAATGTTCGAGTATTTATT+AGG - chr4_4:8884204-8884223 Msa0668010:intron 30.0%
GAATGAAAAAACATCCTATG+AGG - chr4_4:8884324-8884343 Msa0668010:CDS 30.0%
AACGCAAGTTTAGGTAATTT+GGG - chr4_4:8884365-8884384 Msa0668010:CDS 30.0%
TAACGCAAGTTTAGGTAATT+TGG - chr4_4:8884366-8884385 Msa0668010:CDS 30.0%
!! GCATTATATTGCTAGCTTTA+AGG + chr4_4:8884399-8884418 Msa0668000:intron 30.0%
AAGCACTTATAAGCTAGAAT+AGG - chr4_4:8884765-8884784 None:intergenic 30.0%
!!! AAGTACAATGTGGTTTTGAA+TGG - chr4_4:8884994-8885013 None:intergenic 30.0%
GTTGATACATTAAAGAAAGG+TGG - chr4_4:8885435-8885454 None:intergenic 30.0%
! TTTTTGAACCATGAAGAGAA+TGG - chr4_4:8885515-8885534 None:intergenic 30.0%
TCTTCATGGTTCAAAAACAA+TGG + chr4_4:8885518-8885537 Msa0668000:intron 30.0%
AACACATTCAAATTTACCAG+AGG + chr4_4:8885626-8885645 Msa0668000:intron 30.0%
CAAATTTACCAGAGGATTTA+TGG + chr4_4:8885634-8885653 Msa0668000:intron 30.0%
! AGAGAGATTTTATTCTTCGA+GGG - chr4_4:8885745-8885764 None:intergenic 30.0%
! TAGAGAGATTTTATTCTTCG+AGG - chr4_4:8885746-8885765 None:intergenic 30.0%
!! TGATTGATTTGAGGTCTAAA+GGG - chr4_4:8886018-8886037 None:intergenic 30.0%
ACTATCTATGGCACAATTAT+GGG - chr4_4:8886218-8886237 None:intergenic 30.0%
GAATTGATCATCACTATCTA+TGG - chr4_4:8886230-8886249 None:intergenic 30.0%
AGATAGTGATGATCAATTCT+TGG + chr4_4:8886231-8886250 Msa0668000:intron 30.0%
!!! TGCAAATTAGTTTTTGTAGC+AGG - chr4_4:8886476-8886495 None:intergenic 30.0%
!! CAAATAGAGGTATTCAAGTA+AGG + chr4_4:8886559-8886578 Msa0668000:intron 30.0%
TTACTACTTCAGATGATCTA+AGG + chr4_4:8886674-8886693 Msa0668000:intron 30.0%
TCATCTTGTATAAACAATCC+TGG + chr4_4:8886813-8886832 Msa0668000:intron 30.0%
TCCAAAAATAGAATCATTGG+AGG - chr4_4:8886917-8886936 None:intergenic 30.0%
ATTCAATCAATAGAAAGCAG+TGG + chr4_4:8886994-8887013 Msa0668000:intron 30.0%
!! GTGTTGAGAACATTTTAAGT+TGG + chr4_4:8880749-8880768 Msa0668000:intron 30.0%
!!! TTGAGAACATTTTAAGTTGG+TGG + chr4_4:8887025-8887044 Msa0668000:intron 30.0%
ATACGGCTCAATTATATTAC+AGG - chr4_4:8887055-8887074 None:intergenic 30.0%
CGTATAAATTAGGCAAAGAA+TGG + chr4_4:8887070-8887089 Msa0668000:intron 30.0%
AAGAATGGAGATTTCATTGA+TGG + chr4_4:8887085-8887104 Msa0668000:intron 30.0%
TCTCTGAATCTAGATCAATA+TGG + chr4_4:8887119-8887138 Msa0668000:intron 30.0%
GTGTGAAAAGTTAAACTCAT+TGG - chr4_4:8881069-8881088 None:intergenic 30.0%
! TAGGCAGATATAATTTTGAG+AGG + chr4_4:8881101-8881120 Msa0668000:intron 30.0%
!! ATAATTTTGAGAGGATACTG+TGG + chr4_4:8881110-8881129 Msa0668000:five_prime_UTR 30.0%
TTTGGATACAATATTTCCCA+AGG + chr4_4:8887434-8887453 Msa0668000:intron 30.0%
ACACAAATGATCAATACCTT+GGG - chr4_4:8881179-8881198 None:intergenic 30.0%
AACACAAATGATCAATACCT+TGG - chr4_4:8881180-8881199 None:intergenic 30.0%
GAACTCACACAATTTAATTG+TGG + chr4_4:8887538-8887557 Msa0668000:intron 30.0%
ACAATTTAATTGTGGAGAAG+TGG + chr4_4:8887546-8887565 Msa0668000:intron 30.0%
CAATTTAATTGTGGAGAAGT+GGG + chr4_4:8887547-8887566 Msa0668000:intron 30.0%
AATTTAATTGTGGAGAAGTG+GGG + chr4_4:8887548-8887567 Msa0668000:intron 30.0%
ATACTGCATATTATATGCAG+GGG - chr4_4:8887594-8887613 None:intergenic 30.0%
GATACTGCATATTATATGCA+GGG - chr4_4:8887595-8887614 None:intergenic 30.0%
GTTATTTGTGGATGTATTCA+GGG + chr4_4:8887708-8887727 Msa0668000:intron 30.0%
TATATGTGCAAGATTGTTCA+AGG - chr4_4:8887766-8887785 None:intergenic 30.0%
TGATTATTCCTCATACCTAA+AGG + chr4_4:8888008-8888027 Msa0668000:intron 30.0%
TTGAAGATCACAAAGCAAAA+TGG - chr4_4:8888040-8888059 None:intergenic 30.0%
AAATACACGATAACCAATGA+TGG - chr4_4:8888083-8888102 None:intergenic 30.0%
!! TCATTGGTTATCGTGTATTT+TGG + chr4_4:8888083-8888102 Msa0668000:intron 30.0%
! TTTTCTCTGTATTCTTCAAG+GGG - chr4_4:8882032-8882051 None:intergenic 30.0%
GTTCAAACATTTCTGCTAAA+TGG - chr4_4:8888459-8888478 None:intergenic 30.0%
CAGAAATGTTTGAACAATTG+TGG + chr4_4:8888464-8888483 Msa0668000:intron 30.0%
!! AGATATATATTGGTCTTCAG+AGG + chr4_4:8888504-8888523 Msa0668000:intron 30.0%
! ACTTTATTCAGAAGCATGTT+TGG + chr4_4:8883060-8883079 Msa0668000:five_prime_UTR 30.0%
GCGGTAAAATAATGCTTATA+CGG - chr4_4:8889161-8889180 None:intergenic 30.0%
!! ATAGTTCTAAATCACAACTG+TGG - chr4_4:8889229-8889248 None:intergenic 30.0%
! CTTGTCTTGATACGTTTTAT+AGG + chr4_4:8889279-8889298 Msa0668000:intron 30.0%
! ACTTCCAGAAACATTTTGAA+TGG + chr4_4:8883620-8883639 Msa0668000:CDS 30.0%
! CTTCCAGAAACATTTTGAAT+GGG + chr4_4:8883621-8883640 Msa0668000:CDS 30.0%
TTTCCCATTCAAAATGTTTC+TGG - chr4_4:8883627-8883646 Msa0668010:intron 30.0%
! AACACAATTTGAGGCCTTAT+TGG - chr4_4:8880304-8880323 None:intergenic 35.0%
GAACCAAACAACACAATTTG+AGG - chr4_4:8880313-8880332 None:intergenic 35.0%
AGTTATAGTGATGAAGGTTG+GGG + chr4_4:8880349-8880368 Msa0668000:five_prime_UTR 35.0%
TACAAACTTGTATTCTCGCA+AGG + chr4_4:8880381-8880400 Msa0668000:five_prime_UTR 35.0%
TCTGGATACAATATTTCCCA+AGG + chr4_4:8881160-8881179 Msa0668000:five_prime_UTR 35.0%
! AAATTGACTAGCTCATGCTA+TGG + chr4_4:8881297-8881316 Msa0668000:intron 35.0%
TTTGTATGTATGTGTCCAGT+TGG + chr4_4:8881515-8881534 Msa0668000:intron 35.0%
! AGATTTTGTTGCAGGTAACA+GGG - chr4_4:8881552-8881571 None:intergenic 35.0%
! AAGATTTTGTTGCAGGTAAC+AGG - chr4_4:8881553-8881572 None:intergenic 35.0%
GTTGATCTCTTAACCGTTAA+CGG - chr4_4:8881578-8881597 None:intergenic 35.0%
! GGTTGATTCCTTTAAGTATG+AGG - chr4_4:8881893-8881912 None:intergenic 35.0%
TTGGTTATTGTGTACTTTGG+GGG + chr4_4:8881960-8881979 Msa0668000:five_prime_UTR 35.0%
TGTGGAATTCAACCTTAAGA+TGG - chr4_4:8882073-8882092 None:intergenic 35.0%
TAACGATGCATACCTTAACT+AGG + chr4_4:8882313-8882332 Msa0668000:five_prime_UTR 35.0%
CTAGGTACCATTTAACAAAC+AGG + chr4_4:8882331-8882350 Msa0668000:five_prime_UTR 35.0%
GCATCAACACTTTAGATCAA+AGG + chr4_4:8882550-8882569 Msa0668000:five_prime_UTR 35.0%
! GTAACTTTATGTGTCGACAT+CGG - chr4_4:8882587-8882606 None:intergenic 35.0%
!! AATAAATGTGCCATTTGTGG+GGG - chr4_4:8882714-8882733 None:intergenic 35.0%
! TCTCATGTAACTTTTGGTCA+TGG - chr4_4:8882774-8882793 None:intergenic 35.0%
!! TGAGATATATTGGTCTTCAG+AGG + chr4_4:8882789-8882808 Msa0668000:five_prime_UTR 35.0%
! TGATTTTGCAGACACAATCA+CGG - chr4_4:8882836-8882855 None:intergenic 35.0%
TGATTGTGTCTGCAAAATCA+AGG + chr4_4:8882836-8882855 Msa0668000:five_prime_UTR 35.0%
ATATATTGGGACCACTAAAG+AGG + chr4_4:8883020-8883039 Msa0668000:five_prime_UTR 35.0%
GATTCATTTGTCCTCTTTAG+TGG - chr4_4:8883034-8883053 None:intergenic 35.0%
TGCTTCTGAATAAAGTCTAC+AGG - chr4_4:8883056-8883075 None:intergenic 35.0%
TACTTACGTGAAGCAAACAT+CGG - chr4_4:8883155-8883174 None:intergenic 35.0%
TGATATTGCAGCTGCAATTT+CGG - chr4_4:8883227-8883246 None:intergenic 35.0%
! CACATTTTTCTACAGCGTTA+AGG + chr4_4:8883325-8883344 Msa0668000:intron 35.0%
TGGAATTCATTTGTCACATG+AGG + chr4_4:8883438-8883457 Msa0668000:CDS 35.0%
GGAATTCATTTGTCACATGA+GGG + chr4_4:8883439-8883458 Msa0668000:CDS 35.0%
AGTGGTGAAAGAGATATTGA+AGG + chr4_4:8883471-8883490 Msa0668000:CDS 35.0%
TTGATTTCCAGTGTAGACAT+GGG - chr4_4:8883519-8883538 Msa0668010:CDS 35.0%
! ATTGATTTCCAGTGTAGACA+TGG - chr4_4:8883520-8883539 Msa0668010:CDS 35.0%
TCTATAGCAACTGGATCATA+TGG - chr4_4:8883568-8883587 Msa0668010:CDS 35.0%
! GTCTTTTCATCTATAGCAAC+TGG - chr4_4:8883577-8883596 Msa0668010:CDS 35.0%
GAGAGAAGGAACCAATAAAT+TGG + chr4_4:8884055-8884074 Msa0668000:intron 35.0%
! AAGAACTCTTTTACCATTGC+GGG - chr4_4:8884116-8884135 Msa0668010:intron 35.0%
!!! GTTTTTTAGAGATGTCGCAT+TGG - chr4_4:8884225-8884244 Msa0668010:intron 35.0%
ACAATGGGATACATCATACA+TGG - chr4_4:8884291-8884310 Msa0668010:intron 35.0%
!!! GTTGTACACATGCCATTTTA+TGG + chr4_4:8884421-8884440 Msa0668000:intron 35.0%
GCAATACTGTCACCATAAAA+TGG - chr4_4:8884436-8884455 Msa0668010:CDS 35.0%
TTAGAAAAACAATTGGACGG+TGG + chr4_4:8884544-8884563 Msa0668000:intron 35.0%
! TGGTAGTTTGCATGTGATTA+GGG - chr4_4:8885100-8885119 None:intergenic 35.0%
! ATGGTAGTTTGCATGTGATT+AGG - chr4_4:8885101-8885120 None:intergenic 35.0%
GTTAACTACCGAAGTTACAT+CGG - chr4_4:8885348-8885367 None:intergenic 35.0%
TAACTACCGATGGTATAAAC+CGG + chr4_4:8885364-8885383 Msa0668000:intron 35.0%
!! AGGGTATTTGCGTATTTTAC+CGG + chr4_4:8885402-8885421 Msa0668000:intron 35.0%
TCATGGTTCAAAAACAATGG+CGG + chr4_4:8885521-8885540 Msa0668000:intron 35.0%
!! CTGAAACTACTGTTGATGAT+GGG - chr4_4:8885791-8885810 None:intergenic 35.0%
!!! GAGAAACTGTTTTGAAACGA+GGG - chr4_4:8885822-8885841 None:intergenic 35.0%
!!! AGAGAAACTGTTTTGAAACG+AGG - chr4_4:8885823-8885842 None:intergenic 35.0%
CAAAGAGACGATTAAGGAAA+GGG - chr4_4:8885895-8885914 None:intergenic 35.0%
TCAAAGAGACGATTAAGGAA+AGG - chr4_4:8885896-8885915 None:intergenic 35.0%
TCCTTAATCGTCTCTTTGAA+AGG + chr4_4:8885897-8885916 Msa0668000:intron 35.0%
ACCTTTCAAAGAGACGATTA+AGG - chr4_4:8885901-8885920 None:intergenic 35.0%
!! GATTGATTTGAGGTCTAAAG+GGG - chr4_4:8886017-8886036 None:intergenic 35.0%
!! GTGATTGATTTGAGGTCTAA+AGG - chr4_4:8886019-8886038 None:intergenic 35.0%
CTATCTATGGCACAATTATG+GGG - chr4_4:8886217-8886236 None:intergenic 35.0%
CACTATCTATGGCACAATTA+TGG - chr4_4:8886219-8886238 None:intergenic 35.0%
GAAGCTCATTGATATTGTAG+AGG - chr4_4:8886406-8886425 None:intergenic 35.0%
! GAGGTATTCAAGTAAGGATT+CGG + chr4_4:8886565-8886584 Msa0668000:intron 35.0%
AGGTATTCAAGTAAGGATTC+GGG + chr4_4:8886566-8886585 Msa0668000:intron 35.0%
!! TTATATAGTGTTGGCAGAAC+TGG + chr4_4:8886642-8886661 Msa0668000:intron 35.0%
AAAATAGAATCATTGGAGGC+TGG - chr4_4:8886913-8886932 None:intergenic 35.0%
! GCCTCCAATGATTCTATTTT+TGG + chr4_4:8886913-8886932 Msa0668000:intron 35.0%
!!! AGAACATTTTAAGTTGGTGG+TGG + chr4_4:8887028-8887047 Msa0668000:intron 35.0%
AGGCTACTTGACCAAAAAAA+AGG - chr4_4:8887510-8887529 None:intergenic 35.0%
!! TTTTTGGTCAAGTAGCCTAT+TGG + chr4_4:8887512-8887531 Msa0668000:intron 35.0%
GGATACTGCATATTATATGC+AGG - chr4_4:8887596-8887615 None:intergenic 35.0%
GGTTATTTGTGGATGTATTC+AGG + chr4_4:8887707-8887726 Msa0668000:intron 35.0%
! AAATTGACTAGCTCATGCTA+TGG + chr4_4:8881297-8881316 Msa0668000:intron 35.0%
! GCAAAATGGTTGATTCCTTT+AGG - chr4_4:8881900-8881919 None:intergenic 35.0%
!! TTGGTTATCGTGTATTTTGG+TGG + chr4_4:8888086-8888105 Msa0668000:intron 35.0%
TGTGGAATTCAACCTTAAGA+TGG - chr4_4:8882073-8882092 None:intergenic 35.0%
! CTTCAGAGGCTTTTAAATTG+CGG + chr4_4:8882803-8882822 Msa0668000:five_prime_UTR 35.0%
TAGAACAACTTATTGGACTG+AGG + chr4_4:8888640-8888659 Msa0668000:intron 35.0%
GATTCATTTGTCCTCTTTAG+TGG - chr4_4:8883034-8883053 None:intergenic 35.0%
TGATATTGCAGCTGCAATTT+CGG - chr4_4:8883227-8883246 None:intergenic 35.0%
! CTTGATACGTTTTATAGGGA+TGG + chr4_4:8889284-8889303 Msa0668000:intron 35.0%
! TGGAATTCATTTGTCACTTG+AGG + chr4_4:8889304-8889323 Msa0668000:intron 35.0%
! GGAATTCATTTGTCACTTGA+GGG + chr4_4:8889305-8889324 Msa0668000:intron 35.0%
AGTTGTGGAAGAGATATTGA+AGG + chr4_4:8889337-8889356 Msa0668000:intron 35.0%
TTGATTTCCAGTGTAGACTT+GGG - chr4_4:8889385-8889404 None:intergenic 35.0%
! ATTGATTTCCAGTGTAGACT+TGG - chr4_4:8889386-8889405 None:intergenic 35.0%
GAATCTTCTGCAAACTCATT+TGG - chr4_4:8889410-8889429 None:intergenic 35.0%
TCTATAGCAACTGGATCATA+TGG - chr4_4:8883568-8883587 Msa0668010:CDS 35.0%
! GTCTTTTCATCTATAGCAAC+TGG - chr4_4:8883577-8883596 Msa0668010:CDS 35.0%
! AACACAATTTGAGGCCTTAT+TGG - chr4_4:8880304-8880323 None:intergenic 35.0%
GAACCAAACAACACAATTTG+AGG - chr4_4:8880313-8880332 None:intergenic 35.0%
AGTTATAGTGATGAAGGTTG+GGG + chr4_4:8880349-8880368 Msa0668000:five_prime_UTR 35.0%
TACAAACTTGTATTCTCGCA+AGG + chr4_4:8880381-8880400 Msa0668000:five_prime_UTR 35.0%
TCTGGATACAATATTTCCCA+AGG + chr4_4:8881160-8881179 Msa0668000:five_prime_UTR 35.0%
! AAATTGACTAGCTCATGCTA+TGG + chr4_4:8881297-8881316 Msa0668000:intron 35.0%
TTTGTATGTATGTGTCCAGT+TGG + chr4_4:8881515-8881534 Msa0668000:intron 35.0%
! AGATTTTGTTGCAGGTAACA+GGG - chr4_4:8881552-8881571 None:intergenic 35.0%
! AAGATTTTGTTGCAGGTAAC+AGG - chr4_4:8881553-8881572 None:intergenic 35.0%
GTTGATCTCTTAACCGTTAA+CGG - chr4_4:8881578-8881597 None:intergenic 35.0%
! GGTTGATTCCTTTAAGTATG+AGG - chr4_4:8881893-8881912 None:intergenic 35.0%
TTGGTTATTGTGTACTTTGG+GGG + chr4_4:8881960-8881979 Msa0668000:five_prime_UTR 35.0%
TGTGGAATTCAACCTTAAGA+TGG - chr4_4:8882073-8882092 None:intergenic 35.0%
TAACGATGCATACCTTAACT+AGG + chr4_4:8882313-8882332 Msa0668000:five_prime_UTR 35.0%
CTAGGTACCATTTAACAAAC+AGG + chr4_4:8882331-8882350 Msa0668000:five_prime_UTR 35.0%
GCATCAACACTTTAGATCAA+AGG + chr4_4:8882550-8882569 Msa0668000:five_prime_UTR 35.0%
! GTAACTTTATGTGTCGACAT+CGG - chr4_4:8882587-8882606 None:intergenic 35.0%
!! AATAAATGTGCCATTTGTGG+GGG - chr4_4:8882714-8882733 None:intergenic 35.0%
! TCTCATGTAACTTTTGGTCA+TGG - chr4_4:8882774-8882793 None:intergenic 35.0%
!! TGAGATATATTGGTCTTCAG+AGG + chr4_4:8882789-8882808 Msa0668000:five_prime_UTR 35.0%
! TGATTTTGCAGACACAATCA+CGG - chr4_4:8882836-8882855 None:intergenic 35.0%
TGATTGTGTCTGCAAAATCA+AGG + chr4_4:8882836-8882855 Msa0668000:five_prime_UTR 35.0%
ATATATTGGGACCACTAAAG+AGG + chr4_4:8883020-8883039 Msa0668000:five_prime_UTR 35.0%
GATTCATTTGTCCTCTTTAG+TGG - chr4_4:8883034-8883053 None:intergenic 35.0%
TGCTTCTGAATAAAGTCTAC+AGG - chr4_4:8883056-8883075 None:intergenic 35.0%
TACTTACGTGAAGCAAACAT+CGG - chr4_4:8883155-8883174 None:intergenic 35.0%
TGATATTGCAGCTGCAATTT+CGG - chr4_4:8883227-8883246 None:intergenic 35.0%
! CACATTTTTCTACAGCGTTA+AGG + chr4_4:8883325-8883344 Msa0668000:intron 35.0%
TGGAATTCATTTGTCACATG+AGG + chr4_4:8883438-8883457 Msa0668000:CDS 35.0%
GGAATTCATTTGTCACATGA+GGG + chr4_4:8883439-8883458 Msa0668000:CDS 35.0%
AGTGGTGAAAGAGATATTGA+AGG + chr4_4:8883471-8883490 Msa0668000:CDS 35.0%
TTGATTTCCAGTGTAGACAT+GGG - chr4_4:8883519-8883538 Msa0668010:CDS 35.0%
! ATTGATTTCCAGTGTAGACA+TGG - chr4_4:8883520-8883539 Msa0668010:CDS 35.0%
TCTATAGCAACTGGATCATA+TGG - chr4_4:8883568-8883587 Msa0668010:CDS 35.0%
! GTCTTTTCATCTATAGCAAC+TGG - chr4_4:8883577-8883596 Msa0668010:CDS 35.0%
GAGAGAAGGAACCAATAAAT+TGG + chr4_4:8884055-8884074 Msa0668000:intron 35.0%
! AAGAACTCTTTTACCATTGC+GGG - chr4_4:8884116-8884135 Msa0668010:intron 35.0%
!!! GTTTTTTAGAGATGTCGCAT+TGG - chr4_4:8884225-8884244 Msa0668010:intron 35.0%
ACAATGGGATACATCATACA+TGG - chr4_4:8884291-8884310 Msa0668010:intron 35.0%
!!! GTTGTACACATGCCATTTTA+TGG + chr4_4:8884421-8884440 Msa0668000:intron 35.0%
GCAATACTGTCACCATAAAA+TGG - chr4_4:8884436-8884455 Msa0668010:CDS 35.0%
TTAGAAAAACAATTGGACGG+TGG + chr4_4:8884544-8884563 Msa0668000:intron 35.0%
! TGGTAGTTTGCATGTGATTA+GGG - chr4_4:8885100-8885119 None:intergenic 35.0%
! ATGGTAGTTTGCATGTGATT+AGG - chr4_4:8885101-8885120 None:intergenic 35.0%
GTTAACTACCGAAGTTACAT+CGG - chr4_4:8885348-8885367 None:intergenic 35.0%
TAACTACCGATGGTATAAAC+CGG + chr4_4:8885364-8885383 Msa0668000:intron 35.0%
!! AGGGTATTTGCGTATTTTAC+CGG + chr4_4:8885402-8885421 Msa0668000:intron 35.0%
TCATGGTTCAAAAACAATGG+CGG + chr4_4:8885521-8885540 Msa0668000:intron 35.0%
!! CTGAAACTACTGTTGATGAT+GGG - chr4_4:8885791-8885810 None:intergenic 35.0%
!!! GAGAAACTGTTTTGAAACGA+GGG - chr4_4:8885822-8885841 None:intergenic 35.0%
!!! AGAGAAACTGTTTTGAAACG+AGG - chr4_4:8885823-8885842 None:intergenic 35.0%
CAAAGAGACGATTAAGGAAA+GGG - chr4_4:8885895-8885914 None:intergenic 35.0%
TCAAAGAGACGATTAAGGAA+AGG - chr4_4:8885896-8885915 None:intergenic 35.0%
TCCTTAATCGTCTCTTTGAA+AGG + chr4_4:8885897-8885916 Msa0668000:intron 35.0%
ACCTTTCAAAGAGACGATTA+AGG - chr4_4:8885901-8885920 None:intergenic 35.0%
!! GATTGATTTGAGGTCTAAAG+GGG - chr4_4:8886017-8886036 None:intergenic 35.0%
!! GTGATTGATTTGAGGTCTAA+AGG - chr4_4:8886019-8886038 None:intergenic 35.0%
CTATCTATGGCACAATTATG+GGG - chr4_4:8886217-8886236 None:intergenic 35.0%
CACTATCTATGGCACAATTA+TGG - chr4_4:8886219-8886238 None:intergenic 35.0%
GAAGCTCATTGATATTGTAG+AGG - chr4_4:8886406-8886425 None:intergenic 35.0%
! GAGGTATTCAAGTAAGGATT+CGG + chr4_4:8886565-8886584 Msa0668000:intron 35.0%
AGGTATTCAAGTAAGGATTC+GGG + chr4_4:8886566-8886585 Msa0668000:intron 35.0%
!! TTATATAGTGTTGGCAGAAC+TGG + chr4_4:8886642-8886661 Msa0668000:intron 35.0%
AAAATAGAATCATTGGAGGC+TGG - chr4_4:8886913-8886932 None:intergenic 35.0%
! GCCTCCAATGATTCTATTTT+TGG + chr4_4:8886913-8886932 Msa0668000:intron 35.0%
!!! AGAACATTTTAAGTTGGTGG+TGG + chr4_4:8887028-8887047 Msa0668000:intron 35.0%
AGGCTACTTGACCAAAAAAA+AGG - chr4_4:8887510-8887529 None:intergenic 35.0%
!! TTTTTGGTCAAGTAGCCTAT+TGG + chr4_4:8887512-8887531 Msa0668000:intron 35.0%
GGATACTGCATATTATATGC+AGG - chr4_4:8887596-8887615 None:intergenic 35.0%
GGTTATTTGTGGATGTATTC+AGG + chr4_4:8887707-8887726 Msa0668000:intron 35.0%
! AAATTGACTAGCTCATGCTA+TGG + chr4_4:8881297-8881316 Msa0668000:intron 35.0%
! GCAAAATGGTTGATTCCTTT+AGG - chr4_4:8881900-8881919 None:intergenic 35.0%
!! TTGGTTATCGTGTATTTTGG+TGG + chr4_4:8888086-8888105 Msa0668000:intron 35.0%
TGTGGAATTCAACCTTAAGA+TGG - chr4_4:8882073-8882092 None:intergenic 35.0%
! CTTCAGAGGCTTTTAAATTG+CGG + chr4_4:8882803-8882822 Msa0668000:five_prime_UTR 35.0%
TAGAACAACTTATTGGACTG+AGG + chr4_4:8888640-8888659 Msa0668000:intron 35.0%
GATTCATTTGTCCTCTTTAG+TGG - chr4_4:8883034-8883053 None:intergenic 35.0%
TGATATTGCAGCTGCAATTT+CGG - chr4_4:8883227-8883246 None:intergenic 35.0%
! CTTGATACGTTTTATAGGGA+TGG + chr4_4:8889284-8889303 Msa0668000:intron 35.0%
! TGGAATTCATTTGTCACTTG+AGG + chr4_4:8889304-8889323 Msa0668000:intron 35.0%
! GGAATTCATTTGTCACTTGA+GGG + chr4_4:8889305-8889324 Msa0668000:intron 35.0%
AGTTGTGGAAGAGATATTGA+AGG + chr4_4:8889337-8889356 Msa0668000:intron 35.0%
TTGATTTCCAGTGTAGACTT+GGG - chr4_4:8889385-8889404 None:intergenic 35.0%
! ATTGATTTCCAGTGTAGACT+TGG - chr4_4:8889386-8889405 None:intergenic 35.0%
GAATCTTCTGCAAACTCATT+TGG - chr4_4:8889410-8889429 None:intergenic 35.0%
TCTATAGCAACTGGATCATA+TGG - chr4_4:8883568-8883587 Msa0668010:CDS 35.0%
! GTCTTTTCATCTATAGCAAC+TGG - chr4_4:8883577-8883596 Msa0668010:CDS 35.0%
ACCATAACAAGTGCATGCAA+AGG + chr4_4:8880192-8880211 Msa0668000:five_prime_UTR 40.0%
! TCCTTTGCATGCACTTGTTA+TGG - chr4_4:8880196-8880215 None:intergenic 40.0%
GTATTGGAAGGGAAAATGGT+AGG + chr4_4:8880277-8880296 Msa0668000:five_prime_UTR 40.0%
GGAAAATGGTAGGACCAATA+AGG + chr4_4:8880287-8880306 Msa0668000:five_prime_UTR 40.0%
! AGGCCTCAAATTGTGTTGTT+TGG + chr4_4:8880307-8880326 Msa0668000:five_prime_UTR 40.0%
AAGAACAGTACTGCATGCAA+TGG + chr4_4:8880646-8880665 Msa0668000:intron 40.0%
! TGCAATGGAACAGTTCCTTT+TGG + chr4_4:8880661-8880680 Msa0668000:intron 40.0%
GTGGTGTCCTCTAATATAAC+TGG + chr4_4:8880771-8880790 Msa0668000:intron 40.0%
!! TTTTGAGAGGATACTGTGGT+TGG + chr4_4:8881114-8881133 Msa0668000:five_prime_UTR 40.0%
GATACTGTGGTTGGAATTCA+AGG + chr4_4:8881123-8881142 Msa0668000:five_prime_UTR 40.0%
! AACGGCTAAGATTTTGTTGC+AGG - chr4_4:8881560-8881579 None:intergenic 40.0%
ACGGTTAAGAGATCAACACA+CGG + chr4_4:8881581-8881600 Msa0668000:intron 40.0%
GGTAAAATTAGGGAGGGATT+CGG - chr4_4:8881824-8881843 None:intergenic 40.0%
! TATTCTTCAAGGGGTACATG+AGG - chr4_4:8882023-8882042 None:intergenic 40.0%
! GTTCTGATTGCAACGACTTT+TGG + chr4_4:8882238-8882257 Msa0668000:five_prime_UTR 40.0%
TTGACAGCGGACAACAAAAT+GGG - chr4_4:8882495-8882514 None:intergenic 40.0%
TTTGACAGCGGACAACAAAA+TGG - chr4_4:8882496-8882515 None:intergenic 40.0%
CCTAAGATAGTGTTTGACAG+CGG - chr4_4:8882508-8882527 None:intergenic 40.0%
!! CTAAAGTGTTGATGCTACGT+AGG - chr4_4:8882545-8882564 None:intergenic 40.0%
TGGGGGAAGATACAACATAA+AGG - chr4_4:8882697-8882716 None:intergenic 40.0%
! AAAATCAAGGTTTTCGCCTC+TGG + chr4_4:8882849-8882868 Msa0668000:five_prime_UTR 40.0%
! AAATCAAGGTTTTCGCCTCT+GGG + chr4_4:8882850-8882869 Msa0668000:five_prime_UTR 40.0%
TGACCTTGACATTCATCTCA+TGG - chr4_4:8883093-8883112 None:intergenic 40.0%
CTACTGTAAATGTCTCCAAC+TGG + chr4_4:8883596-8883615 Msa0668000:CDS 40.0%
!! ATGTTTCTGGAAGTTCCAGT+TGG - chr4_4:8883614-8883633 Msa0668010:intron 40.0%
TGCATTTCCAAACCATCGAA+TGG + chr4_4:8883655-8883674 Msa0668000:CDS 40.0%
!! AATTGGTGATGACCATTCGA+TGG - chr4_4:8883670-8883689 Msa0668010:intron 40.0%
AACTCAGTTATAGACCTTGC+TGG - chr4_4:8883714-8883733 Msa0668010:intron 40.0%
AAATGTTAACGAGTGTCCCT+GGG - chr4_4:8883831-8883850 Msa0668010:intron 40.0%
AAAATGTTAACGAGTGTCCC+TGG - chr4_4:8883832-8883851 Msa0668010:intron 40.0%
! TGAGGAGTACAAGGTACAAT+GGG - chr4_4:8884306-8884325 Msa0668010:intron 40.0%
! ATGAGGAGTACAAGGTACAA+TGG - chr4_4:8884307-8884326 Msa0668010:intron 40.0%
TTGTACCTTGTACTCCTCAT+AGG + chr4_4:8884307-8884326 Msa0668000:intron 40.0%
! AACATCCTATGAGGAGTACA+AGG - chr4_4:8884315-8884334 Msa0668010:CDS 40.0%
! AATAGGGGTTGGCATTTGAA+GGG - chr4_4:8884716-8884735 None:intergenic 40.0%
AGAAAAGCTAGAATAGGGGT+TGG - chr4_4:8884727-8884746 None:intergenic 40.0%
!! CATGTGATTAGGGTTGATGT+AGG - chr4_4:8885090-8885109 None:intergenic 40.0%
!! TTCGTCCAAAATCGATTCGA+AGG + chr4_4:8885209-8885228 Msa0668000:intron 40.0%
!! CACTTCCTTCGAATCGATTT+TGG - chr4_4:8885217-8885236 None:intergenic 40.0%
!! CAAAATCGATTCGAAGGAAG+TGG + chr4_4:8885215-8885234 Msa0668000:intron 40.0%
CATTGACAGTTAACTGCCAA+TGG + chr4_4:8885303-8885322 Msa0668000:intron 40.0%
GTTAACCACCGATGTAACTT+CGG + chr4_4:8885337-8885356 Msa0668000:intron 40.0%
! AAAGAAAGGTGGAAAAGCAC+CGG - chr4_4:8885424-8885443 None:intergenic 40.0%
TCCAACTTCCATTCTCTTCA+TGG + chr4_4:8885504-8885523 Msa0668000:intron 40.0%
ACCATGAAGAGAATGGAAGT+TGG - chr4_4:8885508-8885527 None:intergenic 40.0%
TTCAAAAACAATGGCGGCAA+AGG + chr4_4:8885527-8885546 Msa0668000:intron 40.0%
AGAGAAAATAGCAGCAACAG+AGG + chr4_4:8885554-8885573 Msa0668000:intron 40.0%
ATGTGTTCCCATAAATCCTC+TGG - chr4_4:8885645-8885664 None:intergenic 40.0%
CTTCAAATTCCTCAATGACG+AGG + chr4_4:8885665-8885684 Msa0668000:intron 40.0%
TTCAACCTTCTTCGTCTGAT+GGG + chr4_4:8885699-8885718 Msa0668000:intron 40.0%
! TTTTATTCTTCGAGGGCGAT+CGG - chr4_4:8885738-8885757 None:intergenic 40.0%
!!! GAAGATCTTGTTTTGAGACG+TGG - chr4_4:8885769-8885788 None:intergenic 40.0%
! CCTGAAACTACTGTTGATGA+TGG - chr4_4:8885792-8885811 None:intergenic 40.0%
CCATCATCAACAGTAGTTTC+AGG + chr4_4:8885789-8885808 Msa0668000:intron 40.0%
TAACTCTCTCTTCCAATGCA+TGG + chr4_4:8885945-8885964 Msa0668000:intron 40.0%
!! GGTAGAGAGTGATTGATTTG+AGG - chr4_4:8886027-8886046 None:intergenic 40.0%
!! CTCATTTTCAGGAACCCTAA+CGG - chr4_4:8886053-8886072 None:intergenic 40.0%
! AATGCTCGCAACTCATTTTC+AGG - chr4_4:8886064-8886083 None:intergenic 40.0%
GGATGAGTTCTTCGAGTAAA+AGG - chr4_4:8886177-8886196 None:intergenic 40.0%
! GCTTTAGCTCGTAATATCGT+CGG + chr4_4:8886277-8886296 Msa0668000:intron 40.0%
GCTCATTGATATTGTAGAGG+AGG - chr4_4:8886403-8886422 None:intergenic 40.0%
TCCTGCATTCATAACTAGTG+AGG - chr4_4:8886441-8886460 None:intergenic 40.0%
!! TTTTGAGAGGATACTGTGGT+TGG + chr4_4:8881114-8881133 Msa0668000:five_prime_UTR 40.0%
GATACTGTGGTTGGAATTCA+AGG + chr4_4:8881123-8881142 Msa0668000:five_prime_UTR 40.0%
! TTGTGTGAGTTCTAGCCAAT+AGG - chr4_4:8887530-8887549 None:intergenic 40.0%
TGTGTATGTATGTGACCAGT+TGG + chr4_4:8887896-8887915 Msa0668000:intron 40.0%
TTTGGATCCTCAAGGCAATA+GGG - chr4_4:8887934-8887953 None:intergenic 40.0%
ATTTGGATCCTCAAGGCAAT+AGG - chr4_4:8887935-8887954 None:intergenic 40.0%
TGGTAAAAGTAGGAGGGATT+TGG - chr4_4:8887952-8887971 None:intergenic 40.0%
! GGTTGATTCCTTTAGGTATG+AGG - chr4_4:8888019-8888038 None:intergenic 40.0%
TGATGTTGAGCAACCATCAT+TGG + chr4_4:8888067-8888086 Msa0668000:intron 40.0%
TCTATTCATCCACATCCATC+TGG + chr4_4:8888116-8888135 Msa0668000:intron 40.0%
CGCAAATTCACGAAACTTTC+AGG + chr4_4:8888334-8888353 Msa0668000:intron 40.0%
CTGAGGTCTATAGTAATGTC+AGG + chr4_4:8888657-8888676 Msa0668000:intron 40.0%
TACTTACGTGAAGCAGACAT+CGG - chr4_4:8889046-8889065 None:intergenic 40.0%
ATGTCTGCTTCACGTAAGTA+TGG + chr4_4:8889046-8889065 Msa0668000:intron 40.0%
!! ATGTTTCTGGAAGTTCCAGT+TGG - chr4_4:8883614-8883633 Msa0668010:intron 40.0%
TGCATTTCCAAACCATCGAA+TGG + chr4_4:8883655-8883674 Msa0668000:CDS 40.0%
!! AATTGGTGATGACCATTCGA+TGG - chr4_4:8883670-8883689 Msa0668010:intron 40.0%
CACCAATTTGAAGAATCAGC+TGG + chr4_4:8883682-8883701 Msa0668000:CDS 40.0%
! TGCCAGCTGATTCTTCAAAT+TGG - chr4_4:8889553-8889572 None:intergenic 40.0%
AACTCAGTTATAGACCTTGC+TGG - chr4_4:8883714-8883733 Msa0668010:intron 40.0%
ACCATAACAAGTGCATGCAA+AGG + chr4_4:8880192-8880211 Msa0668000:five_prime_UTR 40.0%
! TCCTTTGCATGCACTTGTTA+TGG - chr4_4:8880196-8880215 None:intergenic 40.0%
GTATTGGAAGGGAAAATGGT+AGG + chr4_4:8880277-8880296 Msa0668000:five_prime_UTR 40.0%
GGAAAATGGTAGGACCAATA+AGG + chr4_4:8880287-8880306 Msa0668000:five_prime_UTR 40.0%
! AGGCCTCAAATTGTGTTGTT+TGG + chr4_4:8880307-8880326 Msa0668000:five_prime_UTR 40.0%
AAGAACAGTACTGCATGCAA+TGG + chr4_4:8880646-8880665 Msa0668000:intron 40.0%
! TGCAATGGAACAGTTCCTTT+TGG + chr4_4:8880661-8880680 Msa0668000:intron 40.0%
GTGGTGTCCTCTAATATAAC+TGG + chr4_4:8880771-8880790 Msa0668000:intron 40.0%
!! TTTTGAGAGGATACTGTGGT+TGG + chr4_4:8881114-8881133 Msa0668000:five_prime_UTR 40.0%
GATACTGTGGTTGGAATTCA+AGG + chr4_4:8881123-8881142 Msa0668000:five_prime_UTR 40.0%
! AACGGCTAAGATTTTGTTGC+AGG - chr4_4:8881560-8881579 None:intergenic 40.0%
ACGGTTAAGAGATCAACACA+CGG + chr4_4:8881581-8881600 Msa0668000:intron 40.0%
GGTAAAATTAGGGAGGGATT+CGG - chr4_4:8881824-8881843 None:intergenic 40.0%
! TATTCTTCAAGGGGTACATG+AGG - chr4_4:8882023-8882042 None:intergenic 40.0%
! GTTCTGATTGCAACGACTTT+TGG + chr4_4:8882238-8882257 Msa0668000:five_prime_UTR 40.0%
TTGACAGCGGACAACAAAAT+GGG - chr4_4:8882495-8882514 None:intergenic 40.0%
TTTGACAGCGGACAACAAAA+TGG - chr4_4:8882496-8882515 None:intergenic 40.0%
CCTAAGATAGTGTTTGACAG+CGG - chr4_4:8882508-8882527 None:intergenic 40.0%
!! CTAAAGTGTTGATGCTACGT+AGG - chr4_4:8882545-8882564 None:intergenic 40.0%
TGGGGGAAGATACAACATAA+AGG - chr4_4:8882697-8882716 None:intergenic 40.0%
! AAAATCAAGGTTTTCGCCTC+TGG + chr4_4:8882849-8882868 Msa0668000:five_prime_UTR 40.0%
! AAATCAAGGTTTTCGCCTCT+GGG + chr4_4:8882850-8882869 Msa0668000:five_prime_UTR 40.0%
TGACCTTGACATTCATCTCA+TGG - chr4_4:8883093-8883112 None:intergenic 40.0%
CTACTGTAAATGTCTCCAAC+TGG + chr4_4:8883596-8883615 Msa0668000:CDS 40.0%
!! ATGTTTCTGGAAGTTCCAGT+TGG - chr4_4:8883614-8883633 Msa0668010:intron 40.0%
TGCATTTCCAAACCATCGAA+TGG + chr4_4:8883655-8883674 Msa0668000:CDS 40.0%
!! AATTGGTGATGACCATTCGA+TGG - chr4_4:8883670-8883689 Msa0668010:intron 40.0%
AACTCAGTTATAGACCTTGC+TGG - chr4_4:8883714-8883733 Msa0668010:intron 40.0%
AAATGTTAACGAGTGTCCCT+GGG - chr4_4:8883831-8883850 Msa0668010:intron 40.0%
AAAATGTTAACGAGTGTCCC+TGG - chr4_4:8883832-8883851 Msa0668010:intron 40.0%
! TGAGGAGTACAAGGTACAAT+GGG - chr4_4:8884306-8884325 Msa0668010:intron 40.0%
! ATGAGGAGTACAAGGTACAA+TGG - chr4_4:8884307-8884326 Msa0668010:intron 40.0%
TTGTACCTTGTACTCCTCAT+AGG + chr4_4:8884307-8884326 Msa0668000:intron 40.0%
! AACATCCTATGAGGAGTACA+AGG - chr4_4:8884315-8884334 Msa0668010:CDS 40.0%
! AATAGGGGTTGGCATTTGAA+GGG - chr4_4:8884716-8884735 None:intergenic 40.0%
AGAAAAGCTAGAATAGGGGT+TGG - chr4_4:8884727-8884746 None:intergenic 40.0%
!! CATGTGATTAGGGTTGATGT+AGG - chr4_4:8885090-8885109 None:intergenic 40.0%
!! TTCGTCCAAAATCGATTCGA+AGG + chr4_4:8885209-8885228 Msa0668000:intron 40.0%
!! CACTTCCTTCGAATCGATTT+TGG - chr4_4:8885217-8885236 None:intergenic 40.0%
!! CAAAATCGATTCGAAGGAAG+TGG + chr4_4:8885215-8885234 Msa0668000:intron 40.0%
CATTGACAGTTAACTGCCAA+TGG + chr4_4:8885303-8885322 Msa0668000:intron 40.0%
GTTAACCACCGATGTAACTT+CGG + chr4_4:8885337-8885356 Msa0668000:intron 40.0%
! AAAGAAAGGTGGAAAAGCAC+CGG - chr4_4:8885424-8885443 None:intergenic 40.0%
TCCAACTTCCATTCTCTTCA+TGG + chr4_4:8885504-8885523 Msa0668000:intron 40.0%
ACCATGAAGAGAATGGAAGT+TGG - chr4_4:8885508-8885527 None:intergenic 40.0%
TTCAAAAACAATGGCGGCAA+AGG + chr4_4:8885527-8885546 Msa0668000:intron 40.0%
AGAGAAAATAGCAGCAACAG+AGG + chr4_4:8885554-8885573 Msa0668000:intron 40.0%
ATGTGTTCCCATAAATCCTC+TGG - chr4_4:8885645-8885664 None:intergenic 40.0%
CTTCAAATTCCTCAATGACG+AGG + chr4_4:8885665-8885684 Msa0668000:intron 40.0%
TTCAACCTTCTTCGTCTGAT+GGG + chr4_4:8885699-8885718 Msa0668000:intron 40.0%
! TTTTATTCTTCGAGGGCGAT+CGG - chr4_4:8885738-8885757 None:intergenic 40.0%
!!! GAAGATCTTGTTTTGAGACG+TGG - chr4_4:8885769-8885788 None:intergenic 40.0%
! CCTGAAACTACTGTTGATGA+TGG - chr4_4:8885792-8885811 None:intergenic 40.0%
CCATCATCAACAGTAGTTTC+AGG + chr4_4:8885789-8885808 Msa0668000:intron 40.0%
TAACTCTCTCTTCCAATGCA+TGG + chr4_4:8885945-8885964 Msa0668000:intron 40.0%
!! GGTAGAGAGTGATTGATTTG+AGG - chr4_4:8886027-8886046 None:intergenic 40.0%
!! CTCATTTTCAGGAACCCTAA+CGG - chr4_4:8886053-8886072 None:intergenic 40.0%
! AATGCTCGCAACTCATTTTC+AGG - chr4_4:8886064-8886083 None:intergenic 40.0%
GGATGAGTTCTTCGAGTAAA+AGG - chr4_4:8886177-8886196 None:intergenic 40.0%
! GCTTTAGCTCGTAATATCGT+CGG + chr4_4:8886277-8886296 Msa0668000:intron 40.0%
GCTCATTGATATTGTAGAGG+AGG - chr4_4:8886403-8886422 None:intergenic 40.0%
TCCTGCATTCATAACTAGTG+AGG - chr4_4:8886441-8886460 None:intergenic 40.0%
!! TTTTGAGAGGATACTGTGGT+TGG + chr4_4:8881114-8881133 Msa0668000:five_prime_UTR 40.0%
GATACTGTGGTTGGAATTCA+AGG + chr4_4:8881123-8881142 Msa0668000:five_prime_UTR 40.0%
! TTGTGTGAGTTCTAGCCAAT+AGG - chr4_4:8887530-8887549 None:intergenic 40.0%
TGTGTATGTATGTGACCAGT+TGG + chr4_4:8887896-8887915 Msa0668000:intron 40.0%
TTTGGATCCTCAAGGCAATA+GGG - chr4_4:8887934-8887953 None:intergenic 40.0%
ATTTGGATCCTCAAGGCAAT+AGG - chr4_4:8887935-8887954 None:intergenic 40.0%
TGGTAAAAGTAGGAGGGATT+TGG - chr4_4:8887952-8887971 None:intergenic 40.0%
! GGTTGATTCCTTTAGGTATG+AGG - chr4_4:8888019-8888038 None:intergenic 40.0%
TGATGTTGAGCAACCATCAT+TGG + chr4_4:8888067-8888086 Msa0668000:intron 40.0%
TCTATTCATCCACATCCATC+TGG + chr4_4:8888116-8888135 Msa0668000:intron 40.0%
CGCAAATTCACGAAACTTTC+AGG + chr4_4:8888334-8888353 Msa0668000:intron 40.0%
CTGAGGTCTATAGTAATGTC+AGG + chr4_4:8888657-8888676 Msa0668000:intron 40.0%
TACTTACGTGAAGCAGACAT+CGG - chr4_4:8889046-8889065 None:intergenic 40.0%
ATGTCTGCTTCACGTAAGTA+TGG + chr4_4:8889046-8889065 Msa0668000:intron 40.0%
!! ATGTTTCTGGAAGTTCCAGT+TGG - chr4_4:8883614-8883633 Msa0668010:intron 40.0%
TGCATTTCCAAACCATCGAA+TGG + chr4_4:8883655-8883674 Msa0668000:CDS 40.0%
!! AATTGGTGATGACCATTCGA+TGG - chr4_4:8883670-8883689 Msa0668010:intron 40.0%
CACCAATTTGAAGAATCAGC+TGG + chr4_4:8883682-8883701 Msa0668000:CDS 40.0%
! TGCCAGCTGATTCTTCAAAT+TGG - chr4_4:8889553-8889572 None:intergenic 40.0%
AACTCAGTTATAGACCTTGC+TGG - chr4_4:8883714-8883733 Msa0668010:intron 40.0%
!! TGCATGCACTTGTTATGGTC+AGG - chr4_4:8880191-8880210 None:intergenic 45.0%
TATGCCAGTGTTGTCAATCG+CGG + chr4_4:8880930-8880949 Msa0668000:intron 45.0%
TTGAGTGATATTGGACGGGA+TGG + chr4_4:8881616-8881635 Msa0668000:intron 45.0%
GATCATCTATAGCCGTTGAG+TGG + chr4_4:8881695-8881714 Msa0668000:intron 45.0%
AAAGCCAATGCACCACTCAA+CGG - chr4_4:8881710-8881729 None:intergenic 45.0%
!!! GCATTGGCTTTTAGTACCGT+TGG + chr4_4:8881719-8881738 Msa0668000:intron 45.0%
GCGGCAGTTTGTAAAACTGT+TGG - chr4_4:8881778-8881797 None:intergenic 45.0%
TGCTGTTGAGCAACCATCAT+TGG + chr4_4:8881941-8881960 Msa0668000:five_prime_UTR 45.0%
TCTATTCATCCACATCCGTC+TGG + chr4_4:8881990-8882009 Msa0668000:five_prime_UTR 45.0%
TTATGCGAGTCTTCTTCGAC+AGG - chr4_4:8882166-8882185 None:intergenic 45.0%
CCGCTGTCAAACACTATCTT+AGG + chr4_4:8882505-8882524 Msa0668000:five_prime_UTR 45.0%
! TATGTGTCGACATCGGTATC+TGG - chr4_4:8882580-8882599 None:intergenic 45.0%
ATGGGCACTAACACATGCAT+TGG - chr4_4:8882665-8882684 None:intergenic 45.0%
GTTGTATCTTCCCCCACAAA+TGG + chr4_4:8882701-8882720 Msa0668000:five_prime_UTR 45.0%
TGCAGACACAATCACGGTTA+TGG - chr4_4:8882830-8882849 None:intergenic 45.0%
! AATCAAGGTTTTCGCCTCTG+GGG + chr4_4:8882851-8882870 Msa0668000:five_prime_UTR 45.0%
GTGCCATGAGATGAATGTCA+AGG + chr4_4:8883087-8883106 Msa0668000:exon 45.0%
ATGTCAAGGTCATTGACCTC+TGG + chr4_4:8883101-8883120 Msa0668000:CDS 45.0%
CACTTCAGCAAAGGGATGAT+TGG + chr4_4:8883128-8883147 Msa0668000:CDS 45.0%
ACATGAGGGTAGCAAGATAG+TGG + chr4_4:8883453-8883472 Msa0668000:CDS 45.0%
GTGATGACCATTCGATGGTT+TGG - chr4_4:8883665-8883684 Msa0668010:intron 45.0%
TCAGCTATCACAAACCAGCA+AGG + chr4_4:8883697-8883716 Msa0668000:CDS 45.0%
AATGTTAACGAGTGTCCCTG+GGG - chr4_4:8883830-8883849 Msa0668010:intron 45.0%
TACTTTACGAGAGCGAGAGA+AGG + chr4_4:8884041-8884060 Msa0668000:intron 45.0%
GTTCTTAAATGGATCACGCG+TGG + chr4_4:8884130-8884149 Msa0668000:intron 45.0%
CTCTTGTAGCTCTTCCAATG+TGG + chr4_4:8884252-8884271 Msa0668000:intron 45.0%
CTTCCAATGTGGAAACACTC+TGG + chr4_4:8884263-8884282 Msa0668000:intron 45.0%
GCACTATAGAGTGAAACGAG+TGG - chr4_4:8884512-8884531 Msa0668010:intron 45.0%
CTCGTTTCACTCTATAGTGC+AGG + chr4_4:8884512-8884531 Msa0668000:intron 45.0%
TTTCACTGGACATGGTGAAG+TGG - chr4_4:8884576-8884595 Msa0668010:CDS 45.0%
CTTCACCATGTCCAGTGAAA+AGG + chr4_4:8884576-8884595 Msa0668000:intron 45.0%
CATGTCCAGTGAAAAGGACA+CGG + chr4_4:8884582-8884601 Msa0668000:intron 45.0%
ATGTCCAGTGAAAAGGACAC+GGG + chr4_4:8884583-8884602 Msa0668000:intron 45.0%
! ATAGGGGTTGGCATTTGAAG+GGG - chr4_4:8884715-8884734 None:intergenic 45.0%
! GAATAGGGGTTGGCATTTGA+AGG - chr4_4:8884717-8884736 None:intergenic 45.0%
TCGAAGGAAGTGGAGAGAAT+TGG + chr4_4:8885225-8885244 Msa0668000:intron 45.0%
! GGAGAGAATTGGAGACGTTT+TGG + chr4_4:8885236-8885255 Msa0668000:intron 45.0%
CAGTTAACTGCCAATGGAAC+CGG + chr4_4:8885309-8885328 Msa0668000:intron 45.0%
AACTACCGAAGTTACATCGG+TGG - chr4_4:8885345-8885364 None:intergenic 45.0%
CTTCGGTAGTTAACTACCGA+TGG + chr4_4:8885354-8885373 Msa0668000:intron 45.0%
TGTTGTTGTCCTCGTCATTG+AGG - chr4_4:8885677-8885696 None:intergenic 45.0%
CATCAGACGAAGAAGGTTGA+AGG - chr4_4:8885700-8885719 None:intergenic 45.0%
CTTCAACCTTCTTCGTCTGA+TGG + chr4_4:8885698-8885717 Msa0668000:intron 45.0%
AGATTCCCATCAGACGAAGA+AGG - chr4_4:8885707-8885726 None:intergenic 45.0%
TCTTCGTCTGATGGGAATCT+AGG + chr4_4:8885707-8885726 Msa0668000:intron 45.0%
AAGGAAAGGGATTGTTGCCT+CGG - chr4_4:8885882-8885901 None:intergenic 45.0%
!! TTTTGGCTAGAAACTCGCCA+AGG - chr4_4:8885985-8886004 None:intergenic 45.0%
! TAAAGGGGAAGCGGAGATTT+TGG - chr4_4:8886002-8886021 None:intergenic 45.0%
! TTTGAGGTCTAAAGGGGAAG+CGG - chr4_4:8886011-8886030 None:intergenic 45.0%
GAACTCATCCTTACAGACAC+TGG + chr4_4:8886187-8886206 Msa0668000:intron 45.0%
AAAGCAATCCTGCGGAGTTT+GGG - chr4_4:8886262-8886281 None:intergenic 45.0%
TAAAGCAATCCTGCGGAGTT+TGG - chr4_4:8886263-8886282 None:intergenic 45.0%
TACGAGCTAAAGCAATCCTG+CGG - chr4_4:8886270-8886289 None:intergenic 45.0%
TTAGCTCGTAATATCGTCGG+TGG + chr4_4:8886280-8886299 Msa0668000:intron 45.0%
TAGCTCGTAATATCGTCGGT+GGG + chr4_4:8886281-8886300 Msa0668000:intron 45.0%
AAGCTGTGACCTTCTTCAAG+AGG + chr4_4:8886327-8886346 Msa0668000:intron 45.0%
CCACTTTGACCTCTTGAAGA+AGG - chr4_4:8886339-8886358 None:intergenic 45.0%
CCTTCTTCAAGAGGTCAAAG+TGG + chr4_4:8886336-8886355 Msa0668000:intron 45.0%
CTTCAAGAGGTCAAAGTGGT+TGG + chr4_4:8886340-8886359 Msa0668000:intron 45.0%
TGTGTTGCACGATATGCGTT+TGG + chr4_4:8886367-8886386 Msa0668000:intron 45.0%
TGATATTGTAGAGGAGGACG+AGG - chr4_4:8886397-8886416 None:intergenic 45.0%
GCCTCACTAGTTATGAATGC+AGG + chr4_4:8886437-8886456 Msa0668000:intron 45.0%
!! ACAACGGAAACCGATTTGCA+GGG + chr4_4:8886495-8886514 Msa0668000:intron 45.0%
!! ATAGTGTTGGCAGAACTGGA+AGG + chr4_4:8886646-8886665 Msa0668000:intron 45.0%
GACAACACTAGCATAGACAC+TGG - chr4_4:8887200-8887219 None:intergenic 45.0%
TATGCTAGTGTTGTCTCTCG+TGG + chr4_4:8887205-8887224 Msa0668000:intron 45.0%
! GAATTCAAGGCGTGTTGTTC+AGG + chr4_4:8887410-8887429 Msa0668000:intron 45.0%
!! AAGGCGTGTTGTTCAGGTTT+TGG + chr4_4:8887416-8887435 Msa0668000:intron 45.0%
TGCATATTATATGCAGGGGC+CGG - chr4_4:8887590-8887609 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG - chr4_4:8887617-8887636 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCA+CGG + chr4_4:8887617-8887636 Msa0668000:intron 45.0%
TTTGTGGATGTATTCAGGGC+TGG + chr4_4:8887712-8887731 Msa0668000:intron 45.0%
TTGGATCCTCAAGGCAATAG+GGG - chr4_4:8887933-8887952 None:intergenic 45.0%
TGTATTCTTCAAGGGGTCCA+AGG - chr4_4:8888142-8888161 None:intergenic 45.0%
TTTCCAGAGCTTGTCGAAGA+AGG + chr4_4:8888272-8888291 Msa0668000:intron 45.0%
GTGCCATGAGATGAATGTCA+AGG + chr4_4:8883087-8883106 Msa0668000:exon 45.0%
! TGGCCTTGACATTCATCTCA+TGG - chr4_4:8888984-8889003 None:intergenic 45.0%
TGAGGGTAGCAAGATAGTTG+TGG + chr4_4:8889322-8889341 Msa0668000:intron 45.0%
ATTGAAGGTCCTCGAAGACA+CGG + chr4_4:8889352-8889371 Msa0668000:intron 45.0%
CTACTGTCAATGTCTCCAAC+TGG + chr4_4:8889462-8889481 Msa0668000:intron 45.0%
GTGATGACCATTCGATGGTT+TGG - chr4_4:8883665-8883684 Msa0668010:intron 45.0%
!! TGCATGCACTTGTTATGGTC+AGG - chr4_4:8880191-8880210 None:intergenic 45.0%
TATGCCAGTGTTGTCAATCG+CGG + chr4_4:8880930-8880949 Msa0668000:intron 45.0%
TTGAGTGATATTGGACGGGA+TGG + chr4_4:8881616-8881635 Msa0668000:intron 45.0%
GATCATCTATAGCCGTTGAG+TGG + chr4_4:8881695-8881714 Msa0668000:intron 45.0%
AAAGCCAATGCACCACTCAA+CGG - chr4_4:8881710-8881729 None:intergenic 45.0%
!!! GCATTGGCTTTTAGTACCGT+TGG + chr4_4:8881719-8881738 Msa0668000:intron 45.0%
GCGGCAGTTTGTAAAACTGT+TGG - chr4_4:8881778-8881797 None:intergenic 45.0%
TGCTGTTGAGCAACCATCAT+TGG + chr4_4:8881941-8881960 Msa0668000:five_prime_UTR 45.0%
TCTATTCATCCACATCCGTC+TGG + chr4_4:8881990-8882009 Msa0668000:five_prime_UTR 45.0%
TTATGCGAGTCTTCTTCGAC+AGG - chr4_4:8882166-8882185 None:intergenic 45.0%
CCGCTGTCAAACACTATCTT+AGG + chr4_4:8882505-8882524 Msa0668000:five_prime_UTR 45.0%
! TATGTGTCGACATCGGTATC+TGG - chr4_4:8882580-8882599 None:intergenic 45.0%
ATGGGCACTAACACATGCAT+TGG - chr4_4:8882665-8882684 None:intergenic 45.0%
GTTGTATCTTCCCCCACAAA+TGG + chr4_4:8882701-8882720 Msa0668000:five_prime_UTR 45.0%
TGCAGACACAATCACGGTTA+TGG - chr4_4:8882830-8882849 None:intergenic 45.0%
! AATCAAGGTTTTCGCCTCTG+GGG + chr4_4:8882851-8882870 Msa0668000:five_prime_UTR 45.0%
GTGCCATGAGATGAATGTCA+AGG + chr4_4:8883087-8883106 Msa0668000:exon 45.0%
ATGTCAAGGTCATTGACCTC+TGG + chr4_4:8883101-8883120 Msa0668000:CDS 45.0%
CACTTCAGCAAAGGGATGAT+TGG + chr4_4:8883128-8883147 Msa0668000:CDS 45.0%
ACATGAGGGTAGCAAGATAG+TGG + chr4_4:8883453-8883472 Msa0668000:CDS 45.0%
GTGATGACCATTCGATGGTT+TGG - chr4_4:8883665-8883684 Msa0668010:intron 45.0%
TCAGCTATCACAAACCAGCA+AGG + chr4_4:8883697-8883716 Msa0668000:CDS 45.0%
AATGTTAACGAGTGTCCCTG+GGG - chr4_4:8883830-8883849 Msa0668010:intron 45.0%
TACTTTACGAGAGCGAGAGA+AGG + chr4_4:8884041-8884060 Msa0668000:intron 45.0%
GTTCTTAAATGGATCACGCG+TGG + chr4_4:8884130-8884149 Msa0668000:intron 45.0%
CTCTTGTAGCTCTTCCAATG+TGG + chr4_4:8884252-8884271 Msa0668000:intron 45.0%
CTTCCAATGTGGAAACACTC+TGG + chr4_4:8884263-8884282 Msa0668000:intron 45.0%
GCACTATAGAGTGAAACGAG+TGG - chr4_4:8884512-8884531 Msa0668010:intron 45.0%
CTCGTTTCACTCTATAGTGC+AGG + chr4_4:8884512-8884531 Msa0668000:intron 45.0%
TTTCACTGGACATGGTGAAG+TGG - chr4_4:8884576-8884595 Msa0668010:CDS 45.0%
CTTCACCATGTCCAGTGAAA+AGG + chr4_4:8884576-8884595 Msa0668000:intron 45.0%
CATGTCCAGTGAAAAGGACA+CGG + chr4_4:8884582-8884601 Msa0668000:intron 45.0%
ATGTCCAGTGAAAAGGACAC+GGG + chr4_4:8884583-8884602 Msa0668000:intron 45.0%
! ATAGGGGTTGGCATTTGAAG+GGG - chr4_4:8884715-8884734 None:intergenic 45.0%
! GAATAGGGGTTGGCATTTGA+AGG - chr4_4:8884717-8884736 None:intergenic 45.0%
TCGAAGGAAGTGGAGAGAAT+TGG + chr4_4:8885225-8885244 Msa0668000:intron 45.0%
! GGAGAGAATTGGAGACGTTT+TGG + chr4_4:8885236-8885255 Msa0668000:intron 45.0%
CAGTTAACTGCCAATGGAAC+CGG + chr4_4:8885309-8885328 Msa0668000:intron 45.0%
AACTACCGAAGTTACATCGG+TGG - chr4_4:8885345-8885364 None:intergenic 45.0%
CTTCGGTAGTTAACTACCGA+TGG + chr4_4:8885354-8885373 Msa0668000:intron 45.0%
TGTTGTTGTCCTCGTCATTG+AGG - chr4_4:8885677-8885696 None:intergenic 45.0%
CATCAGACGAAGAAGGTTGA+AGG - chr4_4:8885700-8885719 None:intergenic 45.0%
CTTCAACCTTCTTCGTCTGA+TGG + chr4_4:8885698-8885717 Msa0668000:intron 45.0%
AGATTCCCATCAGACGAAGA+AGG - chr4_4:8885707-8885726 None:intergenic 45.0%
TCTTCGTCTGATGGGAATCT+AGG + chr4_4:8885707-8885726 Msa0668000:intron 45.0%
AAGGAAAGGGATTGTTGCCT+CGG - chr4_4:8885882-8885901 None:intergenic 45.0%
!! TTTTGGCTAGAAACTCGCCA+AGG - chr4_4:8885985-8886004 None:intergenic 45.0%
! TAAAGGGGAAGCGGAGATTT+TGG - chr4_4:8886002-8886021 None:intergenic 45.0%
! TTTGAGGTCTAAAGGGGAAG+CGG - chr4_4:8886011-8886030 None:intergenic 45.0%
GAACTCATCCTTACAGACAC+TGG + chr4_4:8886187-8886206 Msa0668000:intron 45.0%
AAAGCAATCCTGCGGAGTTT+GGG - chr4_4:8886262-8886281 None:intergenic 45.0%
TAAAGCAATCCTGCGGAGTT+TGG - chr4_4:8886263-8886282 None:intergenic 45.0%
TACGAGCTAAAGCAATCCTG+CGG - chr4_4:8886270-8886289 None:intergenic 45.0%
TTAGCTCGTAATATCGTCGG+TGG + chr4_4:8886280-8886299 Msa0668000:intron 45.0%
TAGCTCGTAATATCGTCGGT+GGG + chr4_4:8886281-8886300 Msa0668000:intron 45.0%
AAGCTGTGACCTTCTTCAAG+AGG + chr4_4:8886327-8886346 Msa0668000:intron 45.0%
CCACTTTGACCTCTTGAAGA+AGG - chr4_4:8886339-8886358 None:intergenic 45.0%
CCTTCTTCAAGAGGTCAAAG+TGG + chr4_4:8886336-8886355 Msa0668000:intron 45.0%
CTTCAAGAGGTCAAAGTGGT+TGG + chr4_4:8886340-8886359 Msa0668000:intron 45.0%
TGTGTTGCACGATATGCGTT+TGG + chr4_4:8886367-8886386 Msa0668000:intron 45.0%
TGATATTGTAGAGGAGGACG+AGG - chr4_4:8886397-8886416 None:intergenic 45.0%
GCCTCACTAGTTATGAATGC+AGG + chr4_4:8886437-8886456 Msa0668000:intron 45.0%
!! ACAACGGAAACCGATTTGCA+GGG + chr4_4:8886495-8886514 Msa0668000:intron 45.0%
!! ATAGTGTTGGCAGAACTGGA+AGG + chr4_4:8886646-8886665 Msa0668000:intron 45.0%
GACAACACTAGCATAGACAC+TGG - chr4_4:8887200-8887219 None:intergenic 45.0%
TATGCTAGTGTTGTCTCTCG+TGG + chr4_4:8887205-8887224 Msa0668000:intron 45.0%
! GAATTCAAGGCGTGTTGTTC+AGG + chr4_4:8887410-8887429 Msa0668000:intron 45.0%
!! AAGGCGTGTTGTTCAGGTTT+TGG + chr4_4:8887416-8887435 Msa0668000:intron 45.0%
TGCATATTATATGCAGGGGC+CGG - chr4_4:8887590-8887609 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG - chr4_4:8887617-8887636 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCA+CGG + chr4_4:8887617-8887636 Msa0668000:intron 45.0%
TTTGTGGATGTATTCAGGGC+TGG + chr4_4:8887712-8887731 Msa0668000:intron 45.0%
TTGGATCCTCAAGGCAATAG+GGG - chr4_4:8887933-8887952 None:intergenic 45.0%
TGTATTCTTCAAGGGGTCCA+AGG - chr4_4:8888142-8888161 None:intergenic 45.0%
TTTCCAGAGCTTGTCGAAGA+AGG + chr4_4:8888272-8888291 Msa0668000:intron 45.0%
GTGCCATGAGATGAATGTCA+AGG + chr4_4:8883087-8883106 Msa0668000:exon 45.0%
! TGGCCTTGACATTCATCTCA+TGG - chr4_4:8888984-8889003 None:intergenic 45.0%
TGAGGGTAGCAAGATAGTTG+TGG + chr4_4:8889322-8889341 Msa0668000:intron 45.0%
ATTGAAGGTCCTCGAAGACA+CGG + chr4_4:8889352-8889371 Msa0668000:intron 45.0%
CTACTGTCAATGTCTCCAAC+TGG + chr4_4:8889462-8889481 Msa0668000:intron 45.0%
GTGATGACCATTCGATGGTT+TGG - chr4_4:8883665-8883684 Msa0668010:intron 45.0%
!!! TTATTTTGATAATAAATAAA+AGG - chr4_4:8883855-8883874 Msa0668010:intron 5.0%
!! AATAATTTGAAAATATATAA+TGG - chr4_4:8884630-8884649 None:intergenic 5.0%
!!! TTATTTTGATAATAAATAAA+AGG - chr4_4:8883855-8883874 Msa0668010:intron 5.0%
!! AATAATTTGAAAATATATAA+TGG - chr4_4:8884630-8884649 None:intergenic 5.0%
CTATCCGCGATTGACAACAC+TGG - chr4_4:8880937-8880956 None:intergenic 50.0%
! GAATTCAAGGCGTGCTGTTC+AGG + chr4_4:8881136-8881155 Msa0668000:five_prime_UTR 50.0%
TGTTGCAGGTAACAGGGCTT+CGG - chr4_4:8881546-8881565 None:intergenic 50.0%
AGTGATATTGGACGGGATGG+AGG + chr4_4:8881619-8881638 Msa0668000:intron 50.0%
GTGATATTGGACGGGATGGA+GGG + chr4_4:8881620-8881639 Msa0668000:intron 50.0%
ATAGCCGTTGAGTGGTGCAT+TGG + chr4_4:8881703-8881722 Msa0668000:intron 50.0%
ACATGAGGACCAAGTCCAGA+CGG - chr4_4:8882008-8882027 None:intergenic 50.0%
TGAATTTGCGCCTCGTTGAC+TGG - chr4_4:8882206-8882225 None:intergenic 50.0%
!!! TTTTCGCCTCTGGGGCTTTT+GGG + chr4_4:8882859-8882878 Msa0668000:five_prime_UTR 50.0%
TTTGCTGAAGTGCAGACCAG+AGG - chr4_4:8883120-8883139 None:intergenic 50.0%
TCTGGTCTGCACTTCAGCAA+AGG + chr4_4:8883119-8883138 Msa0668000:CDS 50.0%
CTGGTCTGCACTTCAGCAAA+GGG + chr4_4:8883120-8883139 Msa0668000:CDS 50.0%
GTGTAGACATGGGTTCCAGT+CGG - chr4_4:8883509-8883528 Msa0668010:CDS 50.0%
ACTGGAACCCATGTCTACAC+TGG + chr4_4:8883509-8883528 Msa0668000:CDS 50.0%
!! TATGCTAAGAGCACCCGCAA+TGG + chr4_4:8884100-8884119 Msa0668000:intron 50.0%
! GCACCAGAGTGTTTCCACAT+TGG - chr4_4:8884269-8884288 Msa0668010:intron 50.0%
TGGACTCTCCAGTCATTGGA+GGG - chr4_4:8884482-8884501 Msa0668010:CDS 50.0%
GTGAAACGAGTGGTTTCCAC+TGG - chr4_4:8884502-8884521 Msa0668010:CDS 50.0%
! CGTGTCCTTTTCACTGGACA+TGG - chr4_4:8884584-8884603 Msa0668010:CDS 50.0%
!! TTAACTGTCGCCGGTTCCAT+TGG - chr4_4:8885322-8885341 None:intergenic 50.0%
CTACCGATGGTATAAACCGG+CGG + chr4_4:8885367-8885386 Msa0668000:intron 50.0%
CAAGAGGTCAAAGTGGTTGG+TGG + chr4_4:8886343-8886362 Msa0668000:intron 50.0%
GTTGCACGATATGCGTTTGG+TGG + chr4_4:8886370-8886389 Msa0668000:intron 50.0%
!! CACAACGGAAACCGATTTGC+AGG + chr4_4:8886494-8886513 Msa0668000:intron 50.0%
CTGTTGTGAGCCCTGCAAAT+CGG - chr4_4:8886508-8886527 None:intergenic 50.0%
GCATATTATATGCAGGGGCC+GGG - chr4_4:8887589-8887608 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG - chr4_4:8887618-8887637 None:intergenic 50.0%
ACCAACTGAGCTAAGCTCAC+GGG + chr4_4:8887618-8887637 Msa0668000:intron 50.0%
AGGAGGGATTTGGATCCTCA+AGG - chr4_4:8887942-8887961 None:intergenic 50.0%
TGAATTTGCGCCTCGTTGAC+TGG - chr4_4:8882206-8882225 None:intergenic 50.0%
GCGGTCTATAACCGCAATTG+TGG + chr4_4:8888537-8888556 Msa0668000:intron 50.0%
! AATGGGGACTAGTGCTGTTG+CGG - chr4_4:8888563-8888582 None:intergenic 50.0%
ATGTCAAGGCCATTGACCTC+TGG + chr4_4:8888992-8889011 Msa0668000:intron 50.0%
AAGTGCAGACCAGAGGTCAA+TGG - chr4_4:8883113-8883132 None:intergenic 50.0%
TTTGCTGAAGTGCAGACCAG+AGG - chr4_4:8883120-8883139 None:intergenic 50.0%
TCTGGTCTGCACTTCAGCAA+AGG + chr4_4:8883119-8883138 Msa0668000:CDS 50.0%
CTGGTCTGCACTTCAGCAAA+GGG + chr4_4:8883120-8883139 Msa0668000:CDS 50.0%
ACTGGAACCCAAGTCTACAC+TGG + chr4_4:8889375-8889394 Msa0668000:intron 50.0%
CTATCCGCGATTGACAACAC+TGG - chr4_4:8880937-8880956 None:intergenic 50.0%
! GAATTCAAGGCGTGCTGTTC+AGG + chr4_4:8881136-8881155 Msa0668000:five_prime_UTR 50.0%
TGTTGCAGGTAACAGGGCTT+CGG - chr4_4:8881546-8881565 None:intergenic 50.0%
AGTGATATTGGACGGGATGG+AGG + chr4_4:8881619-8881638 Msa0668000:intron 50.0%
GTGATATTGGACGGGATGGA+GGG + chr4_4:8881620-8881639 Msa0668000:intron 50.0%
ATAGCCGTTGAGTGGTGCAT+TGG + chr4_4:8881703-8881722 Msa0668000:intron 50.0%
ACATGAGGACCAAGTCCAGA+CGG - chr4_4:8882008-8882027 None:intergenic 50.0%
TGAATTTGCGCCTCGTTGAC+TGG - chr4_4:8882206-8882225 None:intergenic 50.0%
!!! TTTTCGCCTCTGGGGCTTTT+GGG + chr4_4:8882859-8882878 Msa0668000:five_prime_UTR 50.0%
TTTGCTGAAGTGCAGACCAG+AGG - chr4_4:8883120-8883139 None:intergenic 50.0%
TCTGGTCTGCACTTCAGCAA+AGG + chr4_4:8883119-8883138 Msa0668000:CDS 50.0%
CTGGTCTGCACTTCAGCAAA+GGG + chr4_4:8883120-8883139 Msa0668000:CDS 50.0%
GTGTAGACATGGGTTCCAGT+CGG - chr4_4:8883509-8883528 Msa0668010:CDS 50.0%
ACTGGAACCCATGTCTACAC+TGG + chr4_4:8883509-8883528 Msa0668000:CDS 50.0%
!! TATGCTAAGAGCACCCGCAA+TGG + chr4_4:8884100-8884119 Msa0668000:intron 50.0%
! GCACCAGAGTGTTTCCACAT+TGG - chr4_4:8884269-8884288 Msa0668010:intron 50.0%
TGGACTCTCCAGTCATTGGA+GGG - chr4_4:8884482-8884501 Msa0668010:CDS 50.0%
GTGAAACGAGTGGTTTCCAC+TGG - chr4_4:8884502-8884521 Msa0668010:CDS 50.0%
! CGTGTCCTTTTCACTGGACA+TGG - chr4_4:8884584-8884603 Msa0668010:CDS 50.0%
!! TTAACTGTCGCCGGTTCCAT+TGG - chr4_4:8885322-8885341 None:intergenic 50.0%
CTACCGATGGTATAAACCGG+CGG + chr4_4:8885367-8885386 Msa0668000:intron 50.0%
CAAGAGGTCAAAGTGGTTGG+TGG + chr4_4:8886343-8886362 Msa0668000:intron 50.0%
GTTGCACGATATGCGTTTGG+TGG + chr4_4:8886370-8886389 Msa0668000:intron 50.0%
!! CACAACGGAAACCGATTTGC+AGG + chr4_4:8886494-8886513 Msa0668000:intron 50.0%
CTGTTGTGAGCCCTGCAAAT+CGG - chr4_4:8886508-8886527 None:intergenic 50.0%
GCATATTATATGCAGGGGCC+GGG - chr4_4:8887589-8887608 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG - chr4_4:8887618-8887637 None:intergenic 50.0%
ACCAACTGAGCTAAGCTCAC+GGG + chr4_4:8887618-8887637 Msa0668000:intron 50.0%
AGGAGGGATTTGGATCCTCA+AGG - chr4_4:8887942-8887961 None:intergenic 50.0%
TGAATTTGCGCCTCGTTGAC+TGG - chr4_4:8882206-8882225 None:intergenic 50.0%
GCGGTCTATAACCGCAATTG+TGG + chr4_4:8888537-8888556 Msa0668000:intron 50.0%
! AATGGGGACTAGTGCTGTTG+CGG - chr4_4:8888563-8888582 None:intergenic 50.0%
ATGTCAAGGCCATTGACCTC+TGG + chr4_4:8888992-8889011 Msa0668000:intron 50.0%
AAGTGCAGACCAGAGGTCAA+TGG - chr4_4:8883113-8883132 None:intergenic 50.0%
TTTGCTGAAGTGCAGACCAG+AGG - chr4_4:8883120-8883139 None:intergenic 50.0%
TCTGGTCTGCACTTCAGCAA+AGG + chr4_4:8883119-8883138 Msa0668000:CDS 50.0%
CTGGTCTGCACTTCAGCAAA+GGG + chr4_4:8883120-8883139 Msa0668000:CDS 50.0%
ACTGGAACCCAAGTCTACAC+TGG + chr4_4:8889375-8889394 Msa0668000:intron 50.0%
! AAGGCGTGCTGTTCAGGTTC+TGG + chr4_4:8881142-8881161 Msa0668000:five_prime_UTR 55.0%
AGGGCTTCGGATGATCCAAC+TGG - chr4_4:8881533-8881552 None:intergenic 55.0%
! TCTTCGGCTTGTGCATGGTG+CGG - chr4_4:8881797-8881816 None:intergenic 55.0%
! GATCCTCTTCGGCTTGTGCA+TGG - chr4_4:8881802-8881821 None:intergenic 55.0%
GGAGGGATTCGGATCCTCTT+CGG - chr4_4:8881813-8881832 None:intergenic 55.0%
CATCCACATCCGTCTGGACT+TGG + chr4_4:8881996-8882015 Msa0668000:five_prime_UTR 55.0%
CAGTTCTCCTCCAGTCAACG+AGG + chr4_4:8882193-8882212 Msa0668000:five_prime_UTR 55.0%
! ATTTGCGCCTCGTTGACTGG+AGG - chr4_4:8882203-8882222 None:intergenic 55.0%
!!! GTTTTCGCCTCTGGGGCTTT+TGG + chr4_4:8882858-8882877 Msa0668000:five_prime_UTR 55.0%
TTAACGAGTGTCCCTGGGGA+GGG - chr4_4:8883826-8883845 Msa0668010:intron 55.0%
ACTCTCCAGTCATTGGAGGG+GGG - chr4_4:8884479-8884498 Msa0668010:CDS 55.0%
GACTCTCCAGTCATTGGAGG+GGG - chr4_4:8884480-8884499 Msa0668010:CDS 55.0%
GGACTCTCCAGTCATTGGAG+GGG - chr4_4:8884481-8884500 Msa0668010:CDS 55.0%
CTGGACTCTCCAGTCATTGG+AGG - chr4_4:8884483-8884502 Msa0668010:CDS 55.0%
CCACTGGACTCTCCAGTCAT+TGG - chr4_4:8884486-8884505 Msa0668010:CDS 55.0%
CCAATGACTGGAGAGTCCAG+TGG + chr4_4:8884483-8884502 Msa0668000:intron 55.0%
! CTCTCCCGTGTCCTTTTCAC+TGG - chr4_4:8884590-8884609 Msa0668010:CDS 55.0%
CATCGGTGGTTAACTGTCGC+CGG - chr4_4:8885331-8885350 None:intergenic 55.0%
!! CTGCCGCCGGTTTATACCAT+CGG - chr4_4:8885373-8885392 None:intergenic 55.0%
GGCTAGAAACTCGCCAAGGT+CGG - chr4_4:8885981-8886000 None:intergenic 55.0%
TCACTCTCTACCACGCCGTT+AGG + chr4_4:8886035-8886054 Msa0668000:intron 55.0%
CACTCTCTACCACGCCGTTA+GGG + chr4_4:8886036-8886055 Msa0668000:intron 55.0%
TTTCAGGAACCCTAACGGCG+TGG - chr4_4:8886048-8886067 None:intergenic 55.0%
GGGGACAACCAGTGTCTGTA+AGG - chr4_4:8886198-8886217 None:intergenic 55.0%
CGATTTGCAGGGCTCACAAC+AGG + chr4_4:8886506-8886525 Msa0668000:intron 55.0%
CGGGTGCAACTGTTCGCATT+AGG + chr4_4:8886585-8886604 Msa0668000:intron 55.0%
CCAACTGAGCTAAGCTCACG+GGG + chr4_4:8887619-8887638 Msa0668000:intron 55.0%
CCTCAAGGCAATAGGGGCTT+CGG - chr4_4:8887927-8887946 None:intergenic 55.0%
CATCCACATCCATCTGGCCT+TGG + chr4_4:8888122-8888141 Msa0668000:intron 55.0%
GAGCCTTCTTCGACAAGCTC+TGG - chr4_4:8888278-8888297 None:intergenic 55.0%
CAGTTCTCCTCCAGTCAACG+AGG + chr4_4:8882193-8882212 Msa0668000:five_prime_UTR 55.0%
! ATTTGCGCCTCGTTGACTGG+AGG - chr4_4:8882203-8882222 None:intergenic 55.0%
TGCTGTTGCGGCCACAATTG+CGG - chr4_4:8888551-8888570 None:intergenic 55.0%
TCAGCTGGCACAAACCAGCA+AGG + chr4_4:8889563-8889582 Msa0668000:intron 55.0%
! AAGGCGTGCTGTTCAGGTTC+TGG + chr4_4:8881142-8881161 Msa0668000:five_prime_UTR 55.0%
AGGGCTTCGGATGATCCAAC+TGG - chr4_4:8881533-8881552 None:intergenic 55.0%
! TCTTCGGCTTGTGCATGGTG+CGG - chr4_4:8881797-8881816 None:intergenic 55.0%
! GATCCTCTTCGGCTTGTGCA+TGG - chr4_4:8881802-8881821 None:intergenic 55.0%
GGAGGGATTCGGATCCTCTT+CGG - chr4_4:8881813-8881832 None:intergenic 55.0%
CATCCACATCCGTCTGGACT+TGG + chr4_4:8881996-8882015 Msa0668000:five_prime_UTR 55.0%
CAGTTCTCCTCCAGTCAACG+AGG + chr4_4:8882193-8882212 Msa0668000:five_prime_UTR 55.0%
! ATTTGCGCCTCGTTGACTGG+AGG - chr4_4:8882203-8882222 None:intergenic 55.0%
!!! GTTTTCGCCTCTGGGGCTTT+TGG + chr4_4:8882858-8882877 Msa0668000:five_prime_UTR 55.0%
TTAACGAGTGTCCCTGGGGA+GGG - chr4_4:8883826-8883845 Msa0668010:intron 55.0%
ACTCTCCAGTCATTGGAGGG+GGG - chr4_4:8884479-8884498 Msa0668010:CDS 55.0%
GACTCTCCAGTCATTGGAGG+GGG - chr4_4:8884480-8884499 Msa0668010:CDS 55.0%
GGACTCTCCAGTCATTGGAG+GGG - chr4_4:8884481-8884500 Msa0668010:CDS 55.0%
CTGGACTCTCCAGTCATTGG+AGG - chr4_4:8884483-8884502 Msa0668010:CDS 55.0%
CCACTGGACTCTCCAGTCAT+TGG - chr4_4:8884486-8884505 Msa0668010:CDS 55.0%
CCAATGACTGGAGAGTCCAG+TGG + chr4_4:8884483-8884502 Msa0668000:intron 55.0%
! CTCTCCCGTGTCCTTTTCAC+TGG - chr4_4:8884590-8884609 Msa0668010:CDS 55.0%
CATCGGTGGTTAACTGTCGC+CGG - chr4_4:8885331-8885350 None:intergenic 55.0%
!! CTGCCGCCGGTTTATACCAT+CGG - chr4_4:8885373-8885392 None:intergenic 55.0%
GGCTAGAAACTCGCCAAGGT+CGG - chr4_4:8885981-8886000 None:intergenic 55.0%
TCACTCTCTACCACGCCGTT+AGG + chr4_4:8886035-8886054 Msa0668000:intron 55.0%
CACTCTCTACCACGCCGTTA+GGG + chr4_4:8886036-8886055 Msa0668000:intron 55.0%
TTTCAGGAACCCTAACGGCG+TGG - chr4_4:8886048-8886067 None:intergenic 55.0%
GGGGACAACCAGTGTCTGTA+AGG - chr4_4:8886198-8886217 None:intergenic 55.0%
CGATTTGCAGGGCTCACAAC+AGG + chr4_4:8886506-8886525 Msa0668000:intron 55.0%
CGGGTGCAACTGTTCGCATT+AGG + chr4_4:8886585-8886604 Msa0668000:intron 55.0%
CCAACTGAGCTAAGCTCACG+GGG + chr4_4:8887619-8887638 Msa0668000:intron 55.0%
CCTCAAGGCAATAGGGGCTT+CGG - chr4_4:8887927-8887946 None:intergenic 55.0%
CATCCACATCCATCTGGCCT+TGG + chr4_4:8888122-8888141 Msa0668000:intron 55.0%
GAGCCTTCTTCGACAAGCTC+TGG - chr4_4:8888278-8888297 None:intergenic 55.0%
CAGTTCTCCTCCAGTCAACG+AGG + chr4_4:8882193-8882212 Msa0668000:five_prime_UTR 55.0%
! ATTTGCGCCTCGTTGACTGG+AGG - chr4_4:8882203-8882222 None:intergenic 55.0%
TGCTGTTGCGGCCACAATTG+CGG - chr4_4:8888551-8888570 None:intergenic 55.0%
TCAGCTGGCACAAACCAGCA+AGG + chr4_4:8889563-8889582 Msa0668000:intron 55.0%
GCACCATGCACAAGCCGAAG+AGG + chr4_4:8881796-8881815 Msa0668000:intron 60.0%
GGACCAAGTCCAGACGGATG+TGG - chr4_4:8882002-8882021 None:intergenic 60.0%
AGGTCCTCAAAGACGCCGAC+TGG + chr4_4:8883491-8883510 Msa0668000:CDS 60.0%
GGTTCCAGTCGGCGTCTTTG+AGG - chr4_4:8883498-8883517 Msa0668010:CDS 60.0%
TTTAACGAGTGCCCCTCCCC+AGG + chr4_4:8883811-8883830 Msa0668000:three_prime_UTR 60.0%
TTAACGAGTGCCCCTCCCCA+GGG + chr4_4:8883812-8883831 Msa0668000:three_prime_UTR 60.0%
TAACGAGTGTCCCTGGGGAG+GGG - chr4_4:8883825-8883844 Msa0668010:intron 60.0%
GTTAACGAGTGTCCCTGGGG+AGG - chr4_4:8883827-8883846 Msa0668010:intron 60.0%
CTCTCCAGTCATTGGAGGGG+GGG - chr4_4:8884478-8884497 Msa0668010:CDS 60.0%
ACCGGCGGCAGTTAATCGAG+AGG + chr4_4:8885382-8885401 Msa0668000:intron 60.0%
CCCTCTCGATTAACTGCCGC+CGG - chr4_4:8885386-8885405 None:intergenic 60.0%
CCGGCGGCAGTTAATCGAGA+GGG + chr4_4:8885383-8885402 Msa0668000:intron 60.0%
GGCTTCTCGGGACCATGCAT+TGG - chr4_4:8885960-8885979 None:intergenic 60.0%
! ACTCGCCAAGGTCGGCTTCT+CGG - chr4_4:8885973-8885992 None:intergenic 60.0%
! TGTGGAGAAGTGGGGTGTCC+AGG + chr4_4:8887556-8887575 Msa0668000:intron 60.0%
! GTGGAGAAGTGGGGTGTCCA+GGG + chr4_4:8887557-8887576 Msa0668000:intron 60.0%
CCCCGTGAGCTTAGCTCAGT+TGG - chr4_4:8887622-8887641 None:intergenic 60.0%
GGGGCTTCGGATGATCCAAC+TGG - chr4_4:8887914-8887933 None:intergenic 60.0%
CCGAAGCCCCTATTGCCTTG+AGG + chr4_4:8887924-8887943 Msa0668000:intron 60.0%
GGTCCAAGGCCAGATGGATG+TGG - chr4_4:8888128-8888147 None:intergenic 60.0%
TCAAGGGGTCCAAGGCCAGA+TGG - chr4_4:8888134-8888153 None:intergenic 60.0%
AGGTCCTCGAAGACACGGAC+TGG + chr4_4:8889357-8889376 Msa0668000:intron 60.0%
GGTTCCAGTCCGTGTCTTCG+AGG - chr4_4:8889364-8889383 None:intergenic 60.0%
GCACCATGCACAAGCCGAAG+AGG + chr4_4:8881796-8881815 Msa0668000:intron 60.0%
GGACCAAGTCCAGACGGATG+TGG - chr4_4:8882002-8882021 None:intergenic 60.0%
AGGTCCTCAAAGACGCCGAC+TGG + chr4_4:8883491-8883510 Msa0668000:CDS 60.0%
GGTTCCAGTCGGCGTCTTTG+AGG - chr4_4:8883498-8883517 Msa0668010:CDS 60.0%
TTTAACGAGTGCCCCTCCCC+AGG + chr4_4:8883811-8883830 Msa0668000:three_prime_UTR 60.0%
TTAACGAGTGCCCCTCCCCA+GGG + chr4_4:8883812-8883831 Msa0668000:three_prime_UTR 60.0%
TAACGAGTGTCCCTGGGGAG+GGG - chr4_4:8883825-8883844 Msa0668010:intron 60.0%
GTTAACGAGTGTCCCTGGGG+AGG - chr4_4:8883827-8883846 Msa0668010:intron 60.0%
CTCTCCAGTCATTGGAGGGG+GGG - chr4_4:8884478-8884497 Msa0668010:CDS 60.0%
ACCGGCGGCAGTTAATCGAG+AGG + chr4_4:8885382-8885401 Msa0668000:intron 60.0%
CCCTCTCGATTAACTGCCGC+CGG - chr4_4:8885386-8885405 None:intergenic 60.0%
CCGGCGGCAGTTAATCGAGA+GGG + chr4_4:8885383-8885402 Msa0668000:intron 60.0%
GGCTTCTCGGGACCATGCAT+TGG - chr4_4:8885960-8885979 None:intergenic 60.0%
! ACTCGCCAAGGTCGGCTTCT+CGG - chr4_4:8885973-8885992 None:intergenic 60.0%
! TGTGGAGAAGTGGGGTGTCC+AGG + chr4_4:8887556-8887575 Msa0668000:intron 60.0%
! GTGGAGAAGTGGGGTGTCCA+GGG + chr4_4:8887557-8887576 Msa0668000:intron 60.0%
CCCCGTGAGCTTAGCTCAGT+TGG - chr4_4:8887622-8887641 None:intergenic 60.0%
GGGGCTTCGGATGATCCAAC+TGG - chr4_4:8887914-8887933 None:intergenic 60.0%
CCGAAGCCCCTATTGCCTTG+AGG + chr4_4:8887924-8887943 Msa0668000:intron 60.0%
GGTCCAAGGCCAGATGGATG+TGG - chr4_4:8888128-8888147 None:intergenic 60.0%
TCAAGGGGTCCAAGGCCAGA+TGG - chr4_4:8888134-8888153 None:intergenic 60.0%
AGGTCCTCGAAGACACGGAC+TGG + chr4_4:8889357-8889376 Msa0668000:intron 60.0%
GGTTCCAGTCCGTGTCTTCG+AGG - chr4_4:8889364-8889383 None:intergenic 60.0%
TTGGACGGGATGGAGGGAGC+TGG + chr4_4:8881626-8881645 Msa0668000:intron 65.0%
ACGACGCCCAAAAGCCCCAG+AGG - chr4_4:8882868-8882887 None:intergenic 65.0%
CAGACCCCCCCTCCAATGAC+TGG + chr4_4:8884471-8884490 Msa0668000:intron 65.0%
TGGTCCCGAGAAGCCGACCT+TGG + chr4_4:8885965-8885984 Msa0668000:intron 65.0%
! CTCGCCAAGGTCGGCTTCTC+GGG - chr4_4:8885972-8885991 None:intergenic 65.0%
TGGCGCTTCCCAAACTCCGC+AGG + chr4_4:8886251-8886270 Msa0668000:intron 65.0%
GGGTGTCCAGGGTTCGAACC+CGG + chr4_4:8887568-8887587 Msa0668000:intron 65.0%
TTGGACGGGATGGAGGGAGC+TGG + chr4_4:8881626-8881645 Msa0668000:intron 65.0%
ACGACGCCCAAAAGCCCCAG+AGG - chr4_4:8882868-8882887 None:intergenic 65.0%
CAGACCCCCCCTCCAATGAC+TGG + chr4_4:8884471-8884490 Msa0668000:intron 65.0%
TGGTCCCGAGAAGCCGACCT+TGG + chr4_4:8885965-8885984 Msa0668000:intron 65.0%
! CTCGCCAAGGTCGGCTTCTC+GGG - chr4_4:8885972-8885991 None:intergenic 65.0%
TGGCGCTTCCCAAACTCCGC+AGG + chr4_4:8886251-8886270 Msa0668000:intron 65.0%
GGGTGTCCAGGGTTCGAACC+CGG + chr4_4:8887568-8887587 Msa0668000:intron 65.0%
TGGAGGGGGGGTCTGTTCGC+TGG - chr4_4:8884466-8884485 Msa0668010:CDS 70.0%
TGGAGGGGGGGTCTGTTCGC+TGG - chr4_4:8884466-8884485 Msa0668010:CDS 70.0%
CAGGGGCCGGGTTCGAACCC+TGG - chr4_4:8887577-8887596 None:intergenic 75.0%
CAGGGGCCGGGTTCGAACCC+TGG - chr4_4:8887577-8887596 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 8880165 8889675 8880165 ID=Msa0668000;Name=Msa0668000
chr4_4 mRNA 8880165 8889675 8880165 ID=Msa0668000-mRNA-1;Parent=Msa0668000;Name=Msa0668000-mRNA-1;_AED=0.28;_eAED=0.28;_QI=1370|1|1|1|0.66|0.42|7|242|120
chr4_4 exon 8880165 8880402 8880165 ID=Msa0668000-mRNA-1:exon:2814;Parent=Msa0668000-mRNA-1
chr4_4 exon 8881104 8881181 8881104 ID=Msa0668000-mRNA-1:exon:2815;Parent=Msa0668000-mRNA-1
chr4_4 exon 8881939 8882079 8881939 ID=Msa0668000-mRNA-1:exon:2816;Parent=Msa0668000-mRNA-1
chr4_4 exon 8882161 8882754 8882161 ID=Msa0668000-mRNA-1:exon:2817;Parent=Msa0668000-mRNA-1
chr4_4 exon 8882778 8883167 8882778 ID=Msa0668000-mRNA-1:exon:2818;Parent=Msa0668000-mRNA-1
chr4_4 exon 8883435 8883900 8883435 ID=Msa0668000-mRNA-1:exon:2819;Parent=Msa0668000-mRNA-1
chr4_4 exon 8889608 8889675 8889608 ID=Msa0668000-mRNA-1:exon:2820;Parent=Msa0668000-mRNA-1
chr4_4 five_prime_UTR 8880165 8880402 8880165 ID=Msa0668000-mRNA-1:five_prime_utr;Parent=Msa0668000-mRNA-1
chr4_4 five_prime_UTR 8881104 8881181 8881104 ID=Msa0668000-mRNA-1:five_prime_utr;Parent=Msa0668000-mRNA-1
chr4_4 five_prime_UTR 8881939 8882079 8881939 ID=Msa0668000-mRNA-1:five_prime_utr;Parent=Msa0668000-mRNA-1
chr4_4 five_prime_UTR 8882161 8882754 8882161 ID=Msa0668000-mRNA-1:five_prime_utr;Parent=Msa0668000-mRNA-1
chr4_4 five_prime_UTR 8882778 8883096 8882778 ID=Msa0668000-mRNA-1:five_prime_utr;Parent=Msa0668000-mRNA-1
chr4_4 CDS 8883097 8883167 8883097 ID=Msa0668000-mRNA-1:cds;Parent=Msa0668000-mRNA-1
chr4_4 CDS 8883435 8883726 8883435 ID=Msa0668000-mRNA-1:cds;Parent=Msa0668000-mRNA-1
chr4_4 three_prime_UTR 8883727 8883900 8883727 ID=Msa0668000-mRNA-1:three_prime_utr;Parent=Msa0668000-mRNA-1
chr4_4 three_prime_UTR 8889608 8889675 8889608 ID=Msa0668000-mRNA-1:three_prime_utr;Parent=Msa0668000-mRNA-1
Gene Sequence

>Msa0668000

ATGAATGTCAAGGTCATTGACCTCTGGTCTGCACTTCAGCAAAGGGATGATTGGTCCGATGTTTGCTTCACGGATGGAATTCATTTGTCACATGAGGGTAGCAAGATAGTGGTGAAAGAGATATTGAAGGTCCTCAAAGACGCCGACTGGAACCCATGTCTACACTGGAAATCAATGCCAAATGAATTTGCTGAAGATTCGCCATATGATCCAGTTGCTATAGATGAAAAGACTACTGTAAATGTCTCCAACTGGAACTTCCAGAAACATTTTGAATGGGAAAAAGCTTTGTGCATTTCCAAACCATCGAATGGTCATCACCAATTTGAAGAATCAGCTATCACAAACCAGCAAGGTCTATAA

Protein sequence

>Msa0668000

MNVKVIDLWSALQQRDDWSDVCFTDGIHLSHEGSKIVVKEILKVLKDADWNPCLHWKSMPNEFAEDSPYDPVAIDEKTTVNVSNWNFQKHFEWEKALCISKPSNGHHQFEESAITNQQGL*