AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1381720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1381720 MtrunA17_Chr5g0395711 95.163 889 15 1 1 861 1 889 0.0 1721
Msa1381720 MtrunA17_Chr8g0344131 44.498 209 104 3 121 329 215 411 1.72e-38 153
Msa1381720 MtrunA17_Chr8g0344131 48.819 127 56 2 446 572 437 554 6.22e-28 120
Msa1381720 MtrunA17_Chr7g0269591 37.500 224 128 5 108 329 126 339 1.10e-34 142
Msa1381720 MtrunA17_Chr7g0269591 36.364 121 71 2 451 565 377 497 1.35e-15 81.6
Msa1381720 MtrunA17_Chr4g0069291 35.659 129 74 3 443 564 307 433 7.35e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1381720 AT1G54130.1 47.761 201 93 3 121 321 207 395 1.85e-41 163
Msa1381720 AT1G54130.1 42.857 161 75 3 413 573 404 547 4.47e-29 124
Msa1381720 AT3G14050.1 46.766 201 95 3 121 321 203 391 8.62e-40 158
Msa1381720 AT3G14050.1 50.781 128 54 2 446 573 425 543 4.76e-30 127
Msa1381720 AT4G02260.3 36.239 218 127 4 129 344 150 357 9.20e-35 143
Msa1381720 AT4G02260.3 41.667 120 64 2 448 561 376 495 7.77e-16 82.8
Msa1381720 AT4G02260.4 36.239 218 127 4 129 344 150 357 1.47e-34 142
Msa1381720 AT4G02260.4 41.667 120 64 2 448 561 376 495 5.61e-16 83.2
Msa1381720 AT4G02260.2 36.239 218 127 4 129 344 150 357 1.72e-34 142
Msa1381720 AT4G02260.2 41.667 120 64 2 448 561 376 495 5.92e-16 83.2
Msa1381720 AT4G02260.1 36.239 218 127 4 129 344 150 357 1.82e-34 142
Msa1381720 AT4G02260.1 42.975 121 62 3 448 561 376 496 1.08e-15 82.4
Msa1381720 AT3G17470.2 38.281 128 72 4 443 564 319 445 2.25e-13 74.3
Msa1381720 AT3G17470.3 38.281 128 72 4 443 564 304 430 2.41e-13 73.6
Msa1381720 AT3G17470.1 38.281 128 72 4 443 564 304 430 2.62e-13 74.3

Find 219 sgRNAs with CRISPR-Local

Find 889 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACGAGGATGCTTCTGTTTC+AGG 0.107488 tig0020453:-16984 None:intergenic
TAGGAGGATGCTTCTGTTTC+AGG 0.113465 tig0020453:-17026 None:intergenic
CTCTTTGGTTTATAGATTAA+TGG 0.150755 tig0020453:+18452 Msa1381720:intron
CTTTCGCAGCAAGACCAATT+TGG 0.191849 tig0020453:+18703 Msa1381720:intron
AGTCCCATTTGATGTATTAT+TGG 0.197349 tig0020453:+14861 Msa1381720:CDS
AGCCACTAGGCTTGGGATTA+AGG 0.222380 tig0020453:-16564 None:intergenic
AAAATGAGGGTTTGGATTCT+TGG 0.223822 tig0020453:+19833 Msa1381720:three_prime_UTR
CAGAGGAGACATTAATTATT+TGG 0.228404 tig0020453:+12106 Msa1381720:CDS
CTTGGTTCCGTCAACTTCTA+TGG 0.241356 tig0020453:+18855 Msa1381720:CDS
GATGAGGATGCATCTGTTTC+AGG 0.245100 tig0020453:-16942 None:intergenic
TCTTCCTGAGCTTCCTATTC+TGG 0.248865 tig0020453:-13383 None:intergenic
AGGTGTATCCATTCTGTCTA+TGG 0.263485 tig0020453:-16922 None:intergenic
AGTTGGTAGCCGGTGTTTCT+AGG 0.264644 tig0020453:+10051 Msa1381720:CDS
TATTCATACAGGGAGAATTT+TGG 0.269798 tig0020453:+8660 Msa1381720:CDS
AGGTGCATCCATTCTGTCTA+TGG 0.274117 tig0020453:-16964 None:intergenic
CGACACCTGCCAAAGTTTAC+AGG 0.279586 tig0020453:+9995 Msa1381720:CDS
TGAATACAATGTGCTAAATA+AGG 0.294778 tig0020453:-8643 None:intergenic
CAGGACATCGAGGCAGAGTT+TGG 0.303485 tig0020453:+10014 Msa1381720:CDS
AAAATTGAGTGGTTGGAAAA+TGG 0.303632 tig0020453:-7006 None:intergenic
GGCCGCACATTGGCTTTATA+AGG 0.307910 tig0020453:+16878 Msa1381720:CDS
TGTATTTGCAGTTATGTTCC+AGG 0.312336 tig0020453:+15198 Msa1381720:intron
CCTGGTTGTTCGTCAGGTTT+CGG 0.313613 tig0020453:-7384 None:intergenic
AACTGGTTTGGAGGGAAAAC+TGG 0.315287 tig0020453:+19639 Msa1381720:CDS
AGCAAGAAGAATCTGAATAT+TGG 0.316961 tig0020453:+18767 Msa1381720:CDS
TAGGTTGAGTTATATTAATC+AGG 0.322410 tig0020453:+10070 Msa1381720:CDS
GTGTTCACTTGCTTCGAGAT+TGG 0.326319 tig0020453:+12128 Msa1381720:CDS
GCAGGTTCCATACCTCTTCT+TGG 0.331380 tig0020453:-11059 None:intergenic
TTTCGCAGCAAGACCAATTT+GGG 0.332859 tig0020453:+18704 Msa1381720:intron
TAATTTACGAGTCATGCTTT+TGG 0.335849 tig0020453:+11671 Msa1381720:CDS
TCCCAAGCCTAGTGGCTATC+AGG 0.337155 tig0020453:+16570 Msa1381720:CDS
CGGTGCTTGTCTTTCTACTA+AGG 0.345689 tig0020453:+7347 Msa1381720:CDS
TTATGCACGGCTATACAAAA+AGG 0.347651 tig0020453:+17366 Msa1381720:CDS
CGATCCAATAATACATCAAA+TGG 0.348640 tig0020453:-14865 None:intergenic
TGAGCGAGAATTGATTATAT+CGG 0.351086 tig0020453:+15008 Msa1381720:CDS
CGTACTCGTTTACCACTTGA+TGG 0.355219 tig0020453:-8694 None:intergenic
GGATGCTAGCATCAATAATA+AGG 0.358563 tig0020453:+18876 Msa1381720:CDS
TGTTCACTTGCTTCGAGATT+GGG 0.358912 tig0020453:+12129 Msa1381720:CDS
CACGAAACCGAAGGTTGTTC+AGG 0.362256 tig0020453:+14939 Msa1381720:CDS
CCGAAGGTTGTTCAGGATGC+TGG 0.363626 tig0020453:+14946 Msa1381720:CDS
ATTCTGTCTATGGATGAAAA+AGG 0.366978 tig0020453:-16912 None:intergenic
ACTGCTGTTGCTATTGCTTC+CGG 0.367254 tig0020453:+7327 Msa1381720:CDS
CACCCAGTCCTTAGAGTAGA+AGG 0.370880 tig0020453:+17122 Msa1381720:CDS
CGATGTAAATAATTGTATAT+AGG 0.372947 tig0020453:+19758 Msa1381720:three_prime_UTR
AGAGGACCTGGTTGTTCGTC+AGG 0.384067 tig0020453:-7390 None:intergenic
TCAGGATGCTGGGTTAGCTT+TGG 0.387081 tig0020453:+14957 Msa1381720:CDS
GATAATGTAACCTCCATTCC+TGG 0.388551 tig0020453:-15216 None:intergenic
GCAAGAAGAATCTGAATATT+GGG 0.390134 tig0020453:+18768 Msa1381720:CDS
CTTGGCCAAATGCGGAAATC+TGG 0.391265 tig0020453:+8616 Msa1381720:CDS
CCTTACTGTATATGCTATAC+AGG 0.393069 tig0020453:-15254 None:intergenic
AACCTCATAATTTCACCATT+AGG 0.393428 tig0020453:-19580 None:intergenic
CAGGATGGAGTAGATGTTAC+TGG 0.395412 tig0020453:+8451 Msa1381720:CDS
TCAAAGCATGAGAGCTGATC+TGG 0.398676 tig0020453:+13339 Msa1381720:CDS
GATCGCCAGATTTCCGCATT+TGG 0.400729 tig0020453:-8621 None:intergenic
ACCTTTGCATCAGTAAATAT+AGG 0.404646 tig0020453:-8478 None:intergenic
CTCATGCTTTGAAATATTTG+AGG 0.408509 tig0020453:-13328 None:intergenic
AGGACATCGAGGCAGAGTTT+GGG 0.409379 tig0020453:+10015 Msa1381720:CDS
ATGATTAATAGCGGAATAAA+CGG 0.409437 tig0020453:-7295 None:intergenic
GTTCTTATTTGTACTTCTAA+AGG 0.425534 tig0020453:-16739 None:intergenic
GGTGACTTCCTTCTACTCTA+AGG 0.425809 tig0020453:-17130 None:intergenic
TGAATTTGACGTAACGGAAA+CGG 0.427536 tig0020453:-7170 None:intergenic
TGCTGCACAAAGAACTGGTT+TGG 0.428291 tig0020453:+19627 Msa1381720:CDS
TTAGCACATTGTATTCATAC+AGG 0.433323 tig0020453:+8649 Msa1381720:CDS
GTTGATGCTGCACAAAGAAC+TGG 0.434423 tig0020453:+19622 Msa1381720:CDS
GAAGATTGAACCGCGATTTG+AGG 0.440217 tig0020453:-7225 None:intergenic
ATCTACTCCATCCTGCATAA+TGG 0.441784 tig0020453:-8443 None:intergenic
ACTTTGCGTCGTGCTTTGTT+TGG 0.446738 tig0020453:-19504 None:intergenic
ACCTGATAGCCACTAGGCTT+GGG 0.447677 tig0020453:-16571 None:intergenic
TGAGAGAAAGTGAGTGTTCA+TGG 0.448743 tig0020453:-7091 None:intergenic
AACCTGATAGCCACTAGGCT+TGG 0.450431 tig0020453:-16572 None:intergenic
ACCACTTCTCCAAGGTTAAG+AGG 0.451401 tig0020453:-19544 None:intergenic
TTATGCTCTGCCAATGCATA+AGG 0.451449 tig0020453:+12071 Msa1381720:CDS
AACATGGGCTGGCCGCACAT+TGG 0.455297 tig0020453:+16868 Msa1381720:CDS
AAGCTTCCCATCGCTTATCC+TGG 0.456526 tig0020453:-17345 None:intergenic
GAGCAAGAATAAGTCATTGA+AGG 0.456586 tig0020453:+17094 Msa1381720:CDS
CATTGGCTTTATAAGGAAAC+CGG 0.456853 tig0020453:+16885 Msa1381720:CDS
TAAGAATCTAAATCATTCAT+TGG 0.456941 tig0020453:+19725 Msa1381720:exon
TCCTTGCACACTGCAGTTGA+AGG 0.457978 tig0020453:+16703 Msa1381720:CDS
AAGCACGACGCAAAGTTTGA+TGG 0.460137 tig0020453:+19511 Msa1381720:CDS
CGTTGTATCTGCCGTGTTCG+AGG 0.465459 tig0020453:+18792 Msa1381720:CDS
CCTGGACGAATGTTGGTAGA+AGG 0.465788 tig0020453:-18729 None:intergenic
TGGAGCCCTTCGGCCAGAAT+AGG 0.466508 tig0020453:+13370 Msa1381720:CDS
TGCTTCGAGATTGGGTCTGT+GGG 0.468600 tig0020453:+12137 Msa1381720:CDS
TACTTGCTGCTGTTATCATC+AGG 0.469739 tig0020453:+17153 Msa1381720:CDS
ACTTCTAAAGGTGAGTTGTC+AGG 0.470196 tig0020453:-16727 None:intergenic
TCTATGCTTTGCTGTTCTGC+AGG 0.472368 tig0020453:+12182 Msa1381720:CDS
TTGAATGCAGTTAAATTGAC+GGG 0.475039 tig0020453:+19781 Msa1381720:three_prime_UTR
ATATTCAGATTCTTCTTGCT+CGG 0.478819 tig0020453:-18764 None:intergenic
AATGTGAACCAGGGTGTCCT+TGG 0.479072 tig0020453:+11036 Msa1381720:CDS
CTACTAAGGTTGATTTCTTG+TGG 0.479687 tig0020453:+7361 Msa1381720:CDS
CTTCCTTCTACTCTAAGGAC+TGG 0.480606 tig0020453:-17125 None:intergenic
CCAGCATCCTGAACAACCTT+CGG 0.480695 tig0020453:-14946 None:intergenic
TTGCTTCGAGATTGGGTCTG+TGG 0.482974 tig0020453:+12136 Msa1381720:CDS
TTGGTAGAAGGCGCCCAAAT+TGG 0.484321 tig0020453:-18717 None:intergenic
GAAAGGCAACTTGATACCTT+TGG 0.488742 tig0020453:+13414 Msa1381720:CDS
GATGTCCTGTAAACTTTGGC+AGG 0.489416 tig0020453:-10000 None:intergenic
GGCTTCCATGTGGAGCCCTT+CGG 0.489733 tig0020453:+13360 Msa1381720:CDS
CTCATAGTGATGATGAAATA+CGG 0.491767 tig0020453:-7063 None:intergenic
AGAAATATGCTGATTTGAAA+GGG 0.492623 tig0020453:+19807 Msa1381720:three_prime_UTR
GTAGTTATATGTTGGCCTAA+TGG 0.492948 tig0020453:+19565 Msa1381720:CDS
GTTGAATGCAGTTAAATTGA+CGG 0.496062 tig0020453:+19780 Msa1381720:three_prime_UTR
TTGCAGTTATGTTCCAGGAA+TGG 0.499419 tig0020453:+15203 Msa1381720:intron
GGCCTAATGGTGAAATTATG+AGG 0.500190 tig0020453:+19578 Msa1381720:CDS
AACGGCACCGTGGACGGAAG+CGG 0.500716 tig0020453:-7277 None:intergenic
CTATAGCAACACTGAACTGC+AGG 0.501323 tig0020453:-16093 None:intergenic
CAGAAATATGCTGATTTGAA+AGG 0.502092 tig0020453:+19806 Msa1381720:three_prime_UTR
AGAACGCAATTGCTCTTCCC+AGG 0.505239 tig0020453:-19467 None:intergenic
CCTGTATAGCATATACAGTA+AGG 0.505592 tig0020453:+15254 Msa1381720:CDS
TTGATAACCTGGACGAATGT+TGG 0.506535 tig0020453:-18736 None:intergenic
CCTCGATGTCCTGTAAACTT+TGG 0.508748 tig0020453:-10004 None:intergenic
CGAAGGTTGTTCAGGATGCT+GGG 0.512451 tig0020453:+14947 Msa1381720:CDS
TTTGAGAACAATGCTGTCCT+GGG 0.512870 tig0020453:+19450 Msa1381720:CDS
CATTTGATGTATTATTGGAT+CGG 0.513273 tig0020453:+14866 Msa1381720:CDS
CGTGCATTAAGAGTAGTTGT+AGG 0.514332 tig0020453:+16045 Msa1381720:CDS
TGCACAAAGAACTGGTTTGG+AGG 0.514576 tig0020453:+19630 Msa1381720:CDS
ACATTGGTTTCAGGATCTGT+TGG 0.515595 tig0020453:+14831 Msa1381720:intron
AGCGGCGGCGATTACATTGG+CGG 0.516812 tig0020453:-7247 None:intergenic
TGGGTTAGCTTTGGCATCGT+TGG 0.518344 tig0020453:+14966 Msa1381720:CDS
ACAGCTTGAGCCTTATGCAT+TGG 0.519191 tig0020453:-12081 None:intergenic
GGGAGAGAAAATTGAGTGGT+TGG 0.520042 tig0020453:-7013 None:intergenic
AAACGGAATCTGCGAAGAAG+TGG 0.523820 tig0020453:-7153 None:intergenic
TCCTATATTTACTGATGCAA+AGG 0.524023 tig0020453:+8477 Msa1381720:CDS
AGCAGCGGCGGCGATTACAT+TGG 0.525931 tig0020453:-7250 None:intergenic
TCGGCCAGAATAGGAAGCTC+AGG 0.525979 tig0020453:+13379 Msa1381720:CDS
CAAATCCTTGGCATTCAATG+AGG 0.526601 tig0020453:+13465 Msa1381720:CDS
AGACTTTGGACACCGATAGA+TGG 0.529038 tig0020453:+16523 Msa1381720:intron
GAAATTATGAGGTTAAAAGC+TGG 0.529938 tig0020453:+19589 Msa1381720:CDS
TCCATACCTCTTCTTGGCCA+AGG 0.532900 tig0020453:-11053 None:intergenic
CCTTCTACCAACATTCGTCC+AGG 0.532976 tig0020453:+18729 Msa1381720:CDS
ACCTTCAACTGCAGTGTGCA+AGG 0.533306 tig0020453:-16704 None:intergenic
TCCTCTTAACCTTGGAGAAG+TGG 0.533885 tig0020453:+19543 Msa1381720:CDS
CAGATTTCCGCATTTGGCCA+AGG 0.534036 tig0020453:-8615 None:intergenic
GAGAAGTGGTAGTTATATGT+TGG 0.534360 tig0020453:+19557 Msa1381720:CDS
GATCCAATAATACATCAAAT+GGG 0.541241 tig0020453:-14864 None:intergenic
CCTAATACAAAACTCAAAGA+TGG 0.543073 tig0020453:+19688 Msa1381720:CDS
TCGAAGGGTAAATGTGAACC+AGG 0.547212 tig0020453:+11026 Msa1381720:CDS
TCAGGAAGATTATATGTGAA+AGG 0.547490 tig0020453:+13397 Msa1381720:CDS
CTAGCATCCATAGAAGTTGA+CGG 0.548977 tig0020453:-18862 None:intergenic
GGAATAAACGGCACCGTGGA+CGG 0.551030 tig0020453:-7283 None:intergenic
ATCGCAATCAAAATTAGACT+TGG 0.551458 tig0020453:+18837 Msa1381720:CDS
CAGTTATGTTCCAGGAATGG+AGG 0.553847 tig0020453:+15206 Msa1381720:intron
ACATGCAGGTACCATTATGC+AGG 0.554015 tig0020453:+8432 Msa1381720:intron
ATCCTCATCCATAGACAGAA+TGG 0.554296 tig0020453:+16956 Msa1381720:CDS
CCACGTGGTCCTCTTAACCT+TGG 0.557933 tig0020453:+19535 Msa1381720:CDS
TGAGGGTCTCTGCAGTATGA+AGG 0.559454 tig0020453:+13483 Msa1381720:CDS
TGAGTATGCTGAACATGGGC+TGG 0.563833 tig0020453:+16857 Msa1381720:CDS
GACGGAAGCGGCTTTAGCAG+CGG 0.564248 tig0020453:-7265 None:intergenic
CTTCTTGGCCAAGGACACCC+TGG 0.566474 tig0020453:-11044 None:intergenic
AAGAATAAGTCATTGAAGGC+TGG 0.566635 tig0020453:+17098 Msa1381720:CDS
GTTGTATCTGCCGTGTTCGA+GGG 0.567185 tig0020453:+18793 Msa1381720:CDS
ATCCATTCTGTCTATGGATG+AGG 0.570002 tig0020453:-16958 None:intergenic
TAGCACATTGTATTCATACA+GGG 0.572022 tig0020453:+8650 Msa1381720:CDS
CCGAAACCTGACGAACAACC+AGG 0.572544 tig0020453:+7384 Msa1381720:CDS
AGCTTCCTATTCTGGCCGAA+GGG 0.573907 tig0020453:-13375 None:intergenic
ATCCTCGTCTATAGACAGAA+TGG 0.578285 tig0020453:+16998 Msa1381720:CDS
CTTAGTAGAAAGACAAGCAC+CGG 0.578339 tig0020453:-7346 None:intergenic
GCACAAAGAACTGGTTTGGA+GGG 0.579517 tig0020453:+19631 Msa1381720:CDS
ATTATTGGATCGGAGAAAGC+GGG 0.581581 tig0020453:+14876 Msa1381720:CDS
GCTGCATTGGTTCCATCAAG+TGG 0.582949 tig0020453:+8682 Msa1381720:CDS
TTCCTTCTACTCTAAGGACT+GGG 0.583222 tig0020453:-17124 None:intergenic
GAGCTTCCTATTCTGGCCGA+AGG 0.584549 tig0020453:-13376 None:intergenic
ATGCATGAGTATGCTGAACA+TGG 0.584829 tig0020453:+16852 Msa1381720:CDS
TGTGTGAAGGCAGGTACAGA+AGG 0.589278 tig0020453:+8567 Msa1381720:intron
AGCTGTTACGCAGACATCGA+AGG 0.589342 tig0020453:+11010 Msa1381720:intron
GGCAGAGTTTGGGGATGATG+TGG 0.591384 tig0020453:+10025 Msa1381720:CDS
TCATCAAATTCACCATCTAT+CGG 0.592464 tig0020453:-16535 None:intergenic
CTATAGTATTGCTAATAATG+TGG 0.592700 tig0020453:+14909 Msa1381720:CDS
TTTGCAAGGAAGGCACACCT+TGG 0.593853 tig0020453:+8598 Msa1381720:CDS
GCTGTTACGCAGACATCGAA+GGG 0.594084 tig0020453:+11011 Msa1381720:intron
GCTCGGTAAAATTGATAACC+TGG 0.594376 tig0020453:-18747 None:intergenic
GGACATCGAGGCAGAGTTTG+GGG 0.594721 tig0020453:+10016 Msa1381720:CDS
GATGTGGCCGAGTTGGTAGC+CGG 0.594899 tig0020453:+10041 Msa1381720:CDS
GGAAGCGGCTTTAGCAGCGG+CGG 0.595574 tig0020453:-7262 None:intergenic
GAGACCCTCATTGAATGCCA+AGG 0.596461 tig0020453:-13470 None:intergenic
TGGGGATGATGTGGCCGAGT+TGG 0.599507 tig0020453:+10034 Msa1381720:CDS
GAGGTTTGAATTTGACGTAA+CGG 0.600174 tig0020453:-7176 None:intergenic
GACGATCAGCAAGCTTGATG+AGG 0.605646 tig0020453:-11719 None:intergenic
GGCATCGTTGGTAATTTGTG+AGG 0.606193 tig0020453:+14978 Msa1381720:CDS
CACTTGCTTGCCCTCGAACA+CGG 0.606773 tig0020453:-18803 None:intergenic
CGATTTGAGGAAGCAAGCAT+CGG 0.607924 tig0020453:-7212 None:intergenic
AAATCCTTGGCATTCAATGA+GGG 0.609329 tig0020453:+13466 Msa1381720:CDS
GCAGGTACCATTATGCAGGA+TGG 0.610198 tig0020453:+8436 Msa1381720:intron
ATAACTCAACCTAGAAACAC+CGG 0.617608 tig0020453:-10060 None:intergenic
ATGCTTGCTTCCTCAAATCG+CGG 0.624901 tig0020453:+7215 Msa1381720:CDS
AGGCACACCTTGGCCAAATG+CGG 0.625282 tig0020453:+8608 Msa1381720:CDS
GGGTGTCCTTGGCCAAGAAG+AGG 0.626061 tig0020453:+11047 Msa1381720:CDS
GCTGTTGAAACAATTGTGGC+TGG 0.629838 tig0020453:+9951 Msa1381720:CDS
TGATGATAACAGCAGCAAGT+AGG 0.630310 tig0020453:-17151 None:intergenic
TATTATTGGATCGGAGAAAG+CGG 0.632900 tig0020453:+14875 Msa1381720:CDS
CGTGTTCGAGGGCAAGCAAG+TGG 0.634324 tig0020453:+18804 Msa1381720:CDS
TTCCTTATAAAGCCAATGTG+CGG 0.637056 tig0020453:-16880 None:intergenic
ATATAACTACCACTTCTCCA+AGG 0.638921 tig0020453:-19552 None:intergenic
AACAGCAACATGATTAATAG+CGG 0.640532 tig0020453:-7304 None:intergenic
ATCCTTAATCCCAAGCCTAG+TGG 0.640710 tig0020453:+16562 Msa1381720:CDS
TAAGGCTCAAGCTGTTGCAG+AGG 0.642796 tig0020453:+12089 Msa1381720:CDS
ATCTATGGTGAGTGGTGACG+TGG 0.648145 tig0020453:-6951 None:intergenic
AGCGATGGGAAGCTTATGCA+CGG 0.649071 tig0020453:+17353 Msa1381720:CDS
AGAAACACCGGCTACCAACT+CGG 0.649191 tig0020453:-10048 None:intergenic
ACAGGCTGTTGAAACAATTG+TGG 0.654913 tig0020453:+9947 Msa1381720:intron
TGAATGCAGTTAAATTGACG+GGG 0.656449 tig0020453:+19782 Msa1381720:three_prime_UTR
AGAAGTACAAATAAGAACAC+AGG 0.657615 tig0020453:+16744 Msa1381720:CDS
AGCTTGATGAGGACAACACG+CGG 0.659385 tig0020453:-11708 None:intergenic
AGCCTAACCTGATAGCCACT+AGG 0.659756 tig0020453:-16577 None:intergenic
GCAAGCATCGGAATAGTGAA+CGG 0.663042 tig0020453:-7200 None:intergenic
ATCCATTCTGTCTATAGACG+AGG 0.664126 tig0020453:-17000 None:intergenic
GTCTTCTTGACATTGTACAC+AGG 0.665107 tig0020453:+16115 Msa1381720:CDS
GGAGACATGCACGAAACCGA+AGG 0.669643 tig0020453:+14930 Msa1381720:CDS
GAGCTGATCTGGCTTCCATG+TGG 0.680512 tig0020453:+13350 Msa1381720:CDS
AGAAAGGAATCTATGGTGAG+TGG 0.689577 tig0020453:-6959 None:intergenic
GCTTGATGAGGACAACACGC+GGG 0.698315 tig0020453:-11707 None:intergenic
TGCATGAGTATGCTGAACAT+GGG 0.699918 tig0020453:+16853 Msa1381720:CDS
GAATGCAGTTAAATTGACGG+GGG 0.701952 tig0020453:+19783 Msa1381720:three_prime_UTR
TAGCGGAATAAACGGCACCG+TGG 0.704540 tig0020453:-7287 None:intergenic
CGAAGGGTAAATGTGAACCA+GGG 0.713631 tig0020453:+11027 Msa1381720:CDS
GCAAAGTTTGATGGTCCACG+TGG 0.717907 tig0020453:+19520 Msa1381720:CDS
TGTTGTGCAGATGAAACGAA+AGG 0.726987 tig0020453:+15993 Msa1381720:intron
CCAAAGTTTACAGGACATCG+AGG 0.730401 tig0020453:+10004 Msa1381720:CDS
CATCGGAATAGTGAACGGTG+AGG 0.739769 tig0020453:-7195 None:intergenic
GTGAGGGAGAGAAAATTGAG+TGG 0.751503 tig0020453:-7017 None:intergenic
CCAAGGTTAAGAGGACCACG+TGG 0.754888 tig0020453:-19535 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAT+TGG - tig0020453:16334-16353 None:intergenic 0.0%
!!! ACTCAATTTATTTTAATTTT+TGG + tig0020453:8748-8767 Msa1381720:intron 10.0%
!! AGGAATATTATTATTTATTT+AGG + tig0020453:11343-11362 Msa1381720:intron 10.0%
!! CATAAAATAAAAAACATAAA+AGG - tig0020453:11778-11797 None:intergenic 10.0%
!!! AGATATTTTTTGTAATTTTA+AGG + tig0020453:16254-16273 Msa1381720:intron 10.0%
!!! GATATTTTTTGTAATTTTAA+GGG + tig0020453:16255-16274 Msa1381720:intron 10.0%
!!! AATAAACGTTAAATATATTT+TGG + tig0020453:18337-18356 Msa1381720:intron 10.0%
!! ATTACCAAAAATATAAATAA+TGG - tig0020453:19207-19226 None:intergenic 10.0%
!! TTTACTCATATAAATATGTT+AGG + tig0020453:7611-7630 Msa1381720:intron 15.0%
!! TTACTCATATAAATATGTTA+GGG + tig0020453:7612-7631 Msa1381720:intron 15.0%
!! TAATTTAGGTAAACTATTAA+AGG + tig0020453:7969-7988 Msa1381720:intron 15.0%
!! AATCTACTTATATTAATGTA+AGG - tig0020453:8408-8427 None:intergenic 15.0%
!! AAGAAAAAAAAATCTTCAAA+GGG - tig0020453:8824-8843 None:intergenic 15.0%
!! AATAATATATCATTCTCTTT+AGG - tig0020453:10315-10334 None:intergenic 15.0%
!! AAATCACAATAAATCAATAA+TGG - tig0020453:10596-10615 None:intergenic 15.0%
!!! ATTATTGATTTATTGTGATT+TGG + tig0020453:10595-10614 Msa1381720:intron 15.0%
!!! TTATTGATTTATTGTGATTT+GGG + tig0020453:10596-10615 Msa1381720:intron 15.0%
!! AAAAAAAAAAAACTAGATAC+TGG + tig0020453:10720-10739 Msa1381720:intron 15.0%
!! GATGTAGTTATTATATAATA+AGG - tig0020453:10981-11000 None:intergenic 15.0%
!!! TTTTACTTTCTCTTTAAATA+GGG + tig0020453:11316-11335 Msa1381720:intron 15.0%
!!! AAAGATTATTTTAATCTCAT+AGG + tig0020453:11874-11893 Msa1381720:intron 15.0%
!! ATAAATAGTTTACAATATGT+AGG + tig0020453:12004-12023 Msa1381720:intron 15.0%
!!! ATATATTTTAAACTATTTGC+TGG + tig0020453:13138-13157 Msa1381720:intron 15.0%
!!! TTTTTTTAAATGCTGTTTTA+TGG + tig0020453:13561-13580 Msa1381720:intron 15.0%
!! TAATTAATAACTGATGTATT+TGG + tig0020453:14601-14620 Msa1381720:intron 15.0%
!! ACTTAATTTACTTTATGTAT+TGG + tig0020453:16230-16249 Msa1381720:intron 15.0%
!!! CAACTTTTATTTAAATACTA+CGG - tig0020453:17578-17597 None:intergenic 15.0%
!! TTGTATTATCTTGAAAAATT+AGG - tig0020453:17613-17632 None:intergenic 15.0%
!! AACAAAATATAAAGAAAAGA+TGG - tig0020453:17808-17827 None:intergenic 15.0%
!!! TTTTTATTTTTTTCCTTGTT+TGG + tig0020453:18221-18240 Msa1381720:intron 15.0%
!!! TTATTTTTTCTTATTCTCTT+TGG + tig0020453:18437-18456 Msa1381720:intron 15.0%
!!! TTCTTTTTCTTAGATATAAA+CGG + tig0020453:18627-18646 Msa1381720:intron 15.0%
!! ATGAATTATTCATAATCTCA+GGG - tig0020453:7568-7587 None:intergenic 20.0%
!! ATATAAATATGTTAGGGAAT+AGG + tig0020453:7618-7637 Msa1381720:intron 20.0%
!! TATAAATATGTTAGGGAATA+GGG + tig0020453:7619-7638 Msa1381720:intron 20.0%
!!! ATTAGTTTGTTACAATAGTT+TGG + tig0020453:7891-7910 Msa1381720:intron 20.0%
!! ATAGTTTACCTAAATTACAA+TGG - tig0020453:7966-7985 None:intergenic 20.0%
!! CAACTTGAATTTAAATACTA+CGG - tig0020453:8155-8174 None:intergenic 20.0%
!! TTATATTAATGTAAGGAATC+AGG - tig0020453:8401-8420 None:intergenic 20.0%
!! AGAAAAAAAAATCTTCAAAG+GGG - tig0020453:8823-8842 None:intergenic 20.0%
!! GAAGAAAAAAAAATCTTCAA+AGG - tig0020453:8825-8844 None:intergenic 20.0%
!! AGGTAATTCATTCAAATATT+AGG - tig0020453:9064-9083 None:intergenic 20.0%
!!! CAATGCAATTTTCATATTAT+TGG - tig0020453:9259-9278 None:intergenic 20.0%
!!! TTTTCATTTATTTCTTCTCT+TGG - tig0020453:9297-9316 None:intergenic 20.0%
!! AATTTCCAAATTGATACAAA+AGG + tig0020453:9689-9708 Msa1381720:intron 20.0%
!! TCATAATAGTTAATGATTCT+AGG + tig0020453:10164-10183 Msa1381720:intron 20.0%
!! CATAATAGTTAATGATTCTA+GGG + tig0020453:10165-10184 Msa1381720:intron 20.0%
!! AAAAATTGTTTGTCTAAACT+TGG + tig0020453:10212-10231 Msa1381720:intron 20.0%
!!! TATTGATTTATTGTGATTTG+GGG + tig0020453:10597-10616 Msa1381720:intron 20.0%
!! CACATAGAAATTACTTATAT+AGG + tig0020453:11088-11107 Msa1381720:intron 20.0%
!!! AGTATTCTTTGATGTTTTAT+TGG + tig0020453:11116-11135 Msa1381720:intron 20.0%
!! TGTGTAACTTTCTTTATATT+TGG - tig0020453:11152-11171 None:intergenic 20.0%
!! TTATATTGAAAGAGGAAAAT+AGG - tig0020453:11236-11255 None:intergenic 20.0%
!!! ATTTTCCTCTTTCAATATAA+TGG + tig0020453:11236-11255 Msa1381720:intron 20.0%
!! AATATCCATTATATTGAAAG+AGG - tig0020453:11244-11263 None:intergenic 20.0%
!!! GTTTTACTTTCTCTTTAAAT+AGG + tig0020453:11315-11334 Msa1381720:intron 20.0%
!! TTTACTTTCTCTTTAAATAG+GGG + tig0020453:11317-11336 Msa1381720:intron 20.0%
!! ATTATTTATTTAGGAGAAGA+TGG + tig0020453:11352-11371 Msa1381720:intron 20.0%
!! TTATTTATTTAGGAGAAGAT+GGG + tig0020453:11353-11372 Msa1381720:intron 20.0%
!! ATAAAATAAAACATGAACTC+TGG - tig0020453:11467-11486 None:intergenic 20.0%
!! AATCAACAAATTCATTACAA+TGG - tig0020453:11532-11551 None:intergenic 20.0%
!!! ATTGTAATGAATTTGTTGAT+TGG + tig0020453:11531-11550 Msa1381720:intron 20.0%
!! AATAAAAAACATAAAAGGCT+CGG - tig0020453:11773-11792 None:intergenic 20.0%
!!! TTCAGATAAAATAGTCTTTT+GGG - tig0020453:12390-12409 None:intergenic 20.0%
!!! TTTCAGATAAAATAGTCTTT+TGG - tig0020453:12391-12410 None:intergenic 20.0%
!! ATAAAAACTCTTGAAAATTG+TGG + tig0020453:12439-12458 Msa1381720:intron 20.0%
!! AAAAAAAAATACCACTTAGT+GGG - tig0020453:13658-13677 None:intergenic 20.0%
!! AAAAAAAAAATACCACTTAG+TGG - tig0020453:13659-13678 None:intergenic 20.0%
!! GTATATCTAGTAATTTCTAA+AGG + tig0020453:13782-13801 Msa1381720:intron 20.0%
!!! AGACAGGATTTTAAATTTTA+GGG + tig0020453:13955-13974 Msa1381720:intron 20.0%
!!! ATTTGTAAAATTGAAAGTGT+GGG - tig0020453:14472-14491 None:intergenic 20.0%
!! AATTTGTAAAATTGAAAGTG+TGG - tig0020453:14473-14492 None:intergenic 20.0%
!! CAAAAAAAATAAATAGTGAC+TGG - tig0020453:14532-14551 None:intergenic 20.0%
!! TAACTTTCCTATTATGTATA+AGG - tig0020453:15467-15486 None:intergenic 20.0%
!! ATGAGAAAAAACAGTATTTA+TGG - tig0020453:15888-15907 None:intergenic 20.0%
!! CTTTGTGTGAATTAAAATAA+TGG + tig0020453:15953-15972 Msa1381720:intron 20.0%
!!! CAATACAATAATTTGTATGA+AGG + tig0020453:16196-16215 Msa1381720:intron 20.0%
!!! TTTTTCCTTTTCAGATATTT+TGG + tig0020453:16369-16388 Msa1381720:intron 20.0%
!! ATAATAAGAGTCAATATATG+GGG - tig0020453:16487-16506 None:intergenic 20.0%
!! CATAATAAGAGTCAATATAT+GGG - tig0020453:16488-16507 None:intergenic 20.0%
!! ACATAATAAGAGTCAATATA+TGG - tig0020453:16489-16508 None:intergenic 20.0%
!!! ATATTTTACTGTATAGACTT+TGG + tig0020453:16509-16528 Msa1381720:intron 20.0%
!! TAACATAAATCCATTAGAAA+TGG - tig0020453:17191-17210 None:intergenic 20.0%
!!! TTGATAATTGATATGAATGT+AGG + tig0020453:17413-17432 Msa1381720:intron 20.0%
!!! TTGATTGGTTAAAACTAAAA+TGG - tig0020453:17917-17936 None:intergenic 20.0%
!! GAAACAAAAACAATGATAAA+GGG - tig0020453:18162-18181 None:intergenic 20.0%
!! AGAAACAAAAACAATGATAA+AGG - tig0020453:18163-18182 None:intergenic 20.0%
!! AAATCATTACAAGGAATTAA+GGG - tig0020453:18412-18431 None:intergenic 20.0%
!! ATAAAAGTCAAATCATTACA+AGG - tig0020453:18421-18440 None:intergenic 20.0%
!!! TCTTTTTCTTAGATATAAAC+GGG + tig0020453:18628-18647 Msa1381720:intron 20.0%
!! AATGTGTAAGAAACATAAAT+TGG - tig0020453:18913-18932 None:intergenic 20.0%
!! CATAATATAAATATTGCTGT+GGG - tig0020453:19178-19197 None:intergenic 20.0%
!! ACATAATATAAATATTGCTG+TGG - tig0020453:19179-19198 None:intergenic 20.0%
!!! GCAACCATTATTTATATTTT+TGG + tig0020453:19200-19219 Msa1381720:intron 20.0%
!!! TCAACATTTTTAAAATCTAC+TGG - tig0020453:19386-19405 None:intergenic 20.0%
!! TAAGAATCTAAATCATTCAT+TGG + tig0020453:19725-19744 Msa1381720:exon 20.0%
!! CGATGTAAATAATTGTATAT+AGG + tig0020453:19758-19777 Msa1381720:three_prime_UTR 20.0%
!!! ATTACATTACATTTTTGACA+AGG - tig0020453:19902-19921 None:intergenic 20.0%
!! ATTATGAGCAAAAATAATCA+TGG - tig0020453:19953-19972 None:intergenic 20.0%
! AAAAATGAGAAAGGAATCTA+TGG - tig0020453:6969-6988 None:intergenic 25.0%
!! ATGATTAATAGCGGAATAAA+CGG - tig0020453:7298-7317 None:intergenic 25.0%
! TGAATTATTCATAATCTCAG+GGG - tig0020453:7567-7586 None:intergenic 25.0%
! CATGAATTATTCATAATCTC+AGG - tig0020453:7569-7588 None:intergenic 25.0%
! GGTTAAATATAAGAATCAAC+TGG + tig0020453:7691-7710 Msa1381720:intron 25.0%
! GTGTATAACCATTGTAATTT+AGG + tig0020453:7955-7974 Msa1381720:intron 25.0%
! AGGTAAACTATTAAAGGTTT+AGG + tig0020453:7975-7994 Msa1381720:intron 25.0%
! TTATCATCAGTGAAAAGATT+AGG - tig0020453:8190-8209 None:intergenic 25.0%
!! TCTTTTCACTGATGATAAAA+CGG + tig0020453:8192-8211 Msa1381720:intron 25.0%
! TAAGTAGATTAATAACATGC+AGG + tig0020453:8418-8437 Msa1381720:intron 25.0%
! TGAATACAATGTGCTAAATA+AGG - tig0020453:8646-8665 None:intergenic 25.0%
!! TCATCTTCAAGTTTATTGAA+TGG - tig0020453:8908-8927 None:intergenic 25.0%
! AGATTTCCCAATATACATTA+AGG + tig0020453:9162-9181 Msa1381720:intron 25.0%
! GATTTCCCAATATACATTAA+GGG + tig0020453:9163-9182 Msa1381720:intron 25.0%
! TAGCCTTTATCTTTATATCT+TGG + tig0020453:9195-9214 Msa1381720:intron 25.0%
! CAACCAAGATATAAAGATAA+AGG - tig0020453:9201-9220 None:intergenic 25.0%
! AAAATTGCATTGTTCTTAGT+TGG + tig0020453:9267-9286 Msa1381720:intron 25.0%
!!! ATCACACATTTTAAGTATCT+TGG + tig0020453:9445-9464 Msa1381720:intron 25.0%
!!! CGATTTAAATTGCTCTAAAA+TGG - tig0020453:9472-9491 None:intergenic 25.0%
! TAGAGCAATTTAAATCGAAA+TGG + tig0020453:9475-9494 Msa1381720:intron 25.0%
! ATAATATCTTACTGTGTTTC+TGG + tig0020453:9597-9616 Msa1381720:intron 25.0%
! TAATATCTTACTGTGTTTCT+GGG + tig0020453:9598-9617 Msa1381720:intron 25.0%
! ATTTGGAAATTAAGATGTTC+AGG - tig0020453:9680-9699 None:intergenic 25.0%
!! TTGAACCTTTTGTATCAATT+TGG - tig0020453:9697-9716 None:intergenic 25.0%
!! AGAGTACTAAATAATCAACT+TGG - tig0020453:9770-9789 None:intergenic 25.0%
! ATGCAATATGTCATAAATGT+TGG + tig0020453:9822-9841 Msa1381720:intron 25.0%
!!! CATACTATCTTGAGTTTTAA+AGG + tig0020453:9855-9874 Msa1381720:intron 25.0%
!! TAGGTTGAGTTATATTAATC+AGG + tig0020453:10070-10089 Msa1381720:CDS 25.0%
! ATATTAATCAGGTATCATGA+AGG + tig0020453:10081-10100 Msa1381720:intron 25.0%
! TTGTATAAAAATCGTGACTT+TGG + tig0020453:10240-10259 Msa1381720:intron 25.0%
!! ATCATAGATCTTAAGCTTTT+AGG - tig0020453:10351-10370 None:intergenic 25.0%
!!! AAGTTTTGTACAACTGAAAA+TGG + tig0020453:10448-10467 Msa1381720:intron 25.0%
! ACTTAAAACCTATAAGTATG+TGG - tig0020453:10474-10493 None:intergenic 25.0%
! TGAAGACCATGTAATTAAAA+AGG + tig0020453:10545-10564 Msa1381720:intron 25.0%
! CAATAAATCAATAATGGTCT+TGG - tig0020453:10590-10609 None:intergenic 25.0%
! ACATTTAAAAGACAGAAGAT+TGG + tig0020453:10641-10660 Msa1381720:intron 25.0%
! AATACTAGAACCAAAACATT+AGG - tig0020453:10750-10769 None:intergenic 25.0%
! ATACCTTAAGAATTTAGTGA+TGG + tig0020453:10861-10880 Msa1381720:intron 25.0%
! TATTTATTTAGGAGAAGATG+GGG + tig0020453:11354-11373 Msa1381720:intron 25.0%
! TGTTTCATTCTTAATCTACT+AGG + tig0020453:11644-11663 Msa1381720:intron 25.0%
!! AAGAGTTTTTATGACCAAAA+AGG - tig0020453:12431-12450 None:intergenic 25.0%
! CTCATTCTCAAATAAAGTAA+AGG - tig0020453:13071-13090 None:intergenic 25.0%
! TTTATTTGAGAATGAGTACT+AGG + tig0020453:13075-13094 Msa1381720:intron 25.0%
! CACAAGAAGATAAAATATTC+AGG - tig0020453:13165-13184 None:intergenic 25.0%
!! AAATATTTGAGGCTGAAATA+AGG - tig0020453:13320-13339 None:intergenic 25.0%
!! TTCTTTTTACAACAAATCCT+TGG + tig0020453:13453-13472 Msa1381720:CDS 25.0%
!! GAGACAGGATTTTAAATTTT+AGG + tig0020453:13954-13973 Msa1381720:intron 25.0%
!!! TTAAATTTTAGGGAGAATTC+TGG + tig0020453:13965-13984 Msa1381720:intron 25.0%
! TTTAATGAATGAATGCTTTC+TGG + tig0020453:14015-14034 Msa1381720:intron 25.0%
! AGAATATTCTCCTTATTGTA+GGG - tig0020453:14162-14181 None:intergenic 25.0%
! TAGAATATTCTCCTTATTGT+AGG - tig0020453:14163-14182 None:intergenic 25.0%
! AACAATTCAAATAAGAACCA+AGG + tig0020453:14332-14351 Msa1381720:intron 25.0%
! TTAAGATCTCATAATTACCT+TGG - tig0020453:14352-14371 None:intergenic 25.0%
! AGGTAATTATGAGATCTTAA+AGG + tig0020453:14352-14371 Msa1381720:intron 25.0%
! TGTTATTGCTATACTACATT+TGG - tig0020453:14407-14426 None:intergenic 25.0%
! AATGTAGTATAGCAATAACA+TGG + tig0020453:14407-14426 Msa1381720:intron 25.0%
! AAAAATAAATAGTGACTGGA+GGG - tig0020453:14528-14547 None:intergenic 25.0%
! AAAAAATAAATAGTGACTGG+AGG - tig0020453:14529-14548 None:intergenic 25.0%
! TTCTTTGCATATAATAGTAC+TGG - tig0020453:14567-14586 None:intergenic 25.0%
!!! TAAGCAAAAAACCACTTTTT+AGG - tig0020453:14666-14685 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + tig0020453:14676-14695 Msa1381720:intron 25.0%
! GATCCAATAATACATCAAAT+GGG - tig0020453:14867-14886 None:intergenic 25.0%
! CATTTGATGTATTATTGGAT+CGG + tig0020453:14866-14885 Msa1381720:CDS 25.0%
! CTATAGTATTGCTAATAATG+TGG + tig0020453:14909-14928 Msa1381720:CDS 25.0%
!! TACATAAAACACAAAGCATT+AGG - tig0020453:15108-15127 None:intergenic 25.0%
! TAAGAGACCTTATACATAAT+AGG + tig0020453:15457-15476 Msa1381720:intron 25.0%
! CCAATAAATTGCATTAGATT+GGG - tig0020453:15692-15711 None:intergenic 25.0%
! TCTGAAAAGGAAAAAAAGAA+TGG - tig0020453:16364-16383 None:intergenic 25.0%
!! TATATTTGTTACTACCCTAT+TGG + tig0020453:16461-16480 Msa1381720:intron 25.0%
!! GTTCTTATTTGTACTTCTAA+AGG - tig0020453:16742-16761 None:intergenic 25.0%
!! TTCATTTTCTACACTGAAAA+CGG - tig0020453:17251-17270 None:intergenic 25.0%
!!! TTTCTTTACTCTTTAGAACA+TGG + tig0020453:17709-17728 Msa1381720:intron 25.0%
! AGAACTAGAATAAAGAAAGT+GGG - tig0020453:18265-18284 None:intergenic 25.0%
! CAAATCATTACAAGGAATTA+AGG - tig0020453:18413-18432 None:intergenic 25.0%
!! CTCTTTGGTTTATAGATTAA+TGG + tig0020453:18452-18471 Msa1381720:intron 25.0%
! CCAACAAAAAAAAGAATGTA+TGG - tig0020453:18546-18565 None:intergenic 25.0%
!!! CCATACATTCTTTTTTTTGT+TGG + tig0020453:18543-18562 Msa1381720:intron 25.0%
!!! CTTTTTTTTGTTGGATTACA+TGG + tig0020453:18552-18571 Msa1381720:intron 25.0%
! AATGATAAGCAAATTCCATT+TGG - tig0020453:18938-18957 None:intergenic 25.0%
! ATTGCCAATTATATTTGACA+CGG - tig0020453:18979-18998 None:intergenic 25.0%
! TCAATTATGCATAGTGATAT+TGG - tig0020453:19287-19306 None:intergenic 25.0%
! TGCATAATTGACTAGAATTT+AGG + tig0020453:19296-19315 Msa1381720:intron 25.0%
!!! TTTTAAAATCTACTGGAACA+CGG - tig0020453:19379-19398 None:intergenic 25.0%
! ACTCTATATATTCATCTTCT+AGG + tig0020453:19420-19439 Msa1381720:intron 25.0%
!!! AGAAATATGCTGATTTGAAA+GGG + tig0020453:19807-19826 Msa1381720:three_prime_UTR 25.0%
! ATTTGAAAGGGAAAAAAATG+AGG + tig0020453:19819-19838 Msa1381720:three_prime_UTR 25.0%
! TTTGAAAGGGAAAAAAATGA+GGG + tig0020453:19820-19839 Msa1381720:three_prime_UTR 25.0%
AAGTGTGAGAAAAATGAGAA+AGG - tig0020453:6978-6997 None:intergenic 30.0%
AAAATTGAGTGGTTGGAAAA+TGG - tig0020453:7009-7028 None:intergenic 30.0%
!!! ATACGGTTATTGTTTTTTCC+CGG - tig0020453:7049-7068 None:intergenic 30.0%
! CTCATAGTGATGATGAAATA+CGG - tig0020453:7066-7085 None:intergenic 30.0%
AACAGCAACATGATTAATAG+CGG - tig0020453:7307-7326 None:intergenic 30.0%
TCACAAGAAAAGAAAGAATC+AGG - tig0020453:7416-7435 None:intergenic 30.0%
! AGAGACTAATTGATAGTAAG+TGG + tig0020453:7670-7689 Msa1381720:intron 30.0%
TGATTCTGTTACTACATGAT+AGG + tig0020453:7808-7827 Msa1381720:intron 30.0%
TAATGTTAATCGTCGTAACT+AGG + tig0020453:7868-7887 Msa1381720:intron 30.0%
TTTATTTAGACTCTCGAGTT+GGG + tig0020453:8024-8043 Msa1381720:intron 30.0%
TCATTCATAATGAAACCTCT+TGG + tig0020453:8345-8364 Msa1381720:intron 30.0%
CATTCATAATGAAACCTCTT+GGG + tig0020453:8346-8365 Msa1381720:intron 30.0%
TCCTATATTTACTGATGCAA+AGG + tig0020453:8477-8496 Msa1381720:CDS 30.0%
ACCTTTGCATCAGTAAATAT+AGG - tig0020453:8481-8500 None:intergenic 30.0%
TTAGCACATTGTATTCATAC+AGG + tig0020453:8649-8668 Msa1381720:CDS 30.0%
TAGCACATTGTATTCATACA+GGG + tig0020453:8650-8669 Msa1381720:CDS 30.0%
! TATTCATACAGGGAGAATTT+TGG + tig0020453:8660-8679 Msa1381720:CDS 30.0%
!! CAGATTCGTTTGTTGTATAA+TGG - tig0020453:8874-8893 None:intergenic 30.0%
!! TCTGATAACGGATATATCAA+AGG - tig0020453:9084-9103 None:intergenic 30.0%
AAATCTTCAATATTTCCAGC+TGG - tig0020453:9148-9167 None:intergenic 30.0%
CTTGACCCTTAATGTATATT+GGG - tig0020453:9171-9190 None:intergenic 30.0%
! ATACTTGTTGAATATGTCCA+AGG + tig0020453:9226-9245 Msa1381720:intron 30.0%
! TACTTGTTGAATATGTCCAA+GGG + tig0020453:9227-9246 Msa1381720:intron 30.0%
!!! ACACAAGTTTTAGAAACACA+TGG + tig0020453:9330-9349 Msa1381720:intron 30.0%
ACAAATGTAGAGGTGAAAAT+TGG + tig0020453:9398-9417 Msa1381720:intron 30.0%
AAATCGAAATGGTCTATCAT+TGG + tig0020453:9486-9505 Msa1381720:intron 30.0%
! AATATCTTACTGTGTTTCTG+GGG + tig0020453:9599-9618 Msa1381720:intron 30.0%
AGATATTGACATTGTGTTAC+AGG + tig0020453:9929-9948 Msa1381720:intron 30.0%
TTTATGAGTTAACCAGAGTT+TGG - tig0020453:10144-10163 None:intergenic 30.0%
TCAAACACATTATTCCGTAA+TGG + tig0020453:10506-10525 Msa1381720:intron 30.0%
TATTCCGTAATGGTTAAGAA+TGG + tig0020453:10516-10535 Msa1381720:intron 30.0%
ATTCCGTAATGGTTAAGAAT+GGG + tig0020453:10517-10536 Msa1381720:intron 30.0%
TTTCCCATTCTTAACCATTA+CGG - tig0020453:10523-10542 None:intergenic 30.0%
!! ACAGGTCCTTTTTAATTACA+TGG - tig0020453:10554-10573 None:intergenic 30.0%
TAATTAAAAAGGACCTGTTC+TGG + tig0020453:10556-10575 Msa1381720:intron 30.0%
TCAAATTTAAGTACCTCACT+TGG + tig0020453:10668-10687 Msa1381720:intron 30.0%
! AATGTTTTCACTGAACTTGT+TGG + tig0020453:10781-10800 Msa1381720:intron 30.0%
CATAGTTATGTTAGGATGAT+GGG - tig0020453:10836-10855 None:intergenic 30.0%
TATTGCACCATAGTTATGTT+AGG - tig0020453:10844-10863 None:intergenic 30.0%
ATGCCATCACTAAATTCTTA+AGG - tig0020453:10867-10886 None:intergenic 30.0%
AATTTCTATGTGTCAAATGC+AGG - tig0020453:11080-11099 None:intergenic 30.0%
AAATAAAACATGAACTCTGG+CGG - tig0020453:11464-11483 None:intergenic 30.0%
CTAATCTTCTGCAAAAAGTT+TGG + tig0020453:11491-11510 Msa1381720:intron 30.0%
TGCGTTCTACAAATCTAAAA+AGG - tig0020453:11581-11600 None:intergenic 30.0%
TTTGTAGAACGCAAGTATAT+TGG + tig0020453:11588-11607 Msa1381720:intron 30.0%
! TAATTTACGAGTCATGCTTT+TGG + tig0020453:11671-11690 Msa1381720:CDS 30.0%
! AATTTACGAGTCATGCTTTT+GGG + tig0020453:11672-11691 Msa1381720:CDS 30.0%
CAAAAAGACAGTCAATAATC+AGG - tig0020453:11801-11820 None:intergenic 30.0%
! TTTTAATCTCATAGGCTTTC+TGG + tig0020453:11882-11901 Msa1381720:intron 30.0%
CAGAGGAGACATTAATTATT+TGG + tig0020453:12106-12125 Msa1381720:CDS 30.0%
! GAAAGAACTGAAATCCTTTT+TGG + tig0020453:12414-12433 Msa1381720:intron 30.0%
AAACTCTTGAAAATTGTGGT+TGG + tig0020453:12443-12462 Msa1381720:intron 30.0%
AACTCTTGAAAATTGTGGTT+GGG + tig0020453:12444-12463 Msa1381720:intron 30.0%
TGATATCATCTTAGAAATCG+TGG + tig0020453:12497-12516 Msa1381720:intron 30.0%
TGATATCATCTTAGAAATCG+TGG + tig0020453:12497-12516 Msa1381720:intron 30.0%
TGATATCATCTTAGAAATCG+TGG + tig0020453:12497-12516 Msa1381720:intron 30.0%
TGATATCATCTTAGAAATCG+TGG + tig0020453:12497-12516 Msa1381720:intron 30.0%
TGATATCATCTTAGAAATCG+TGG + tig0020453:12497-12516 Msa1381720:intron 30.0%
TGACAATGTGTTTATAAGTG+GGG - tig0020453:12975-12994 None:intergenic 30.0%
CTGACAATGTGTTTATAAGT+GGG - tig0020453:12976-12995 None:intergenic 30.0%
AAAGTAAAGGAGCTAATGAA+TGG - tig0020453:13058-13077 None:intergenic 30.0%
!! CTCATGCTTTGAAATATTTG+AGG - tig0020453:13331-13350 None:intergenic 30.0%
TCAGGAAGATTATATGTGAA+AGG + tig0020453:13397-13416 Msa1381720:CDS 30.0%
ACTCAATGAAGTTCAGAATA+TGG + tig0020453:13687-13706 Msa1381720:intron 30.0%
ATGAAGTTCAGAATATGGTT+AGG + tig0020453:13692-13711 Msa1381720:intron 30.0%
! TACTCGAAATTTTTGCCTTT+CGG + tig0020453:13812-13831 Msa1381720:intron 30.0%
ATTCTCTGCTATTGAGTATA+GGG - tig0020453:13996-14015 None:intergenic 30.0%
AATTCTCTGCTATTGAGTAT+AGG - tig0020453:13997-14016 None:intergenic 30.0%
AATGGCTATGTTATTACCAA+GGG - tig0020453:14136-14155 None:intergenic 30.0%
TAATGGCTATGTTATTACCA+AGG - tig0020453:14137-14156 None:intergenic 30.0%
GAATATTCTCCTTATTGTAG+GGG - tig0020453:14161-14180 None:intergenic 30.0%
GCGCATAAAACTAAATGTAT+AGG + tig0020453:14213-14232 Msa1381720:intron 30.0%
TCTATTTAGATGACCATACA+TGG - tig0020453:14258-14277 None:intergenic 30.0%
! TTGCATATAATAGTACTGGA+GGG - tig0020453:14563-14582 None:intergenic 30.0%
! TTTGCATATAATAGTACTGG+AGG - tig0020453:14564-14583 None:intergenic 30.0%
!!! TTTTAGGTTCATTGAACAAC+TGG - tig0020453:14650-14669 None:intergenic 30.0%
TGTTCAATGAACCTAAAAAG+TGG + tig0020453:14652-14671 Msa1381720:intron 30.0%
TCATTCTGATTATGTCACAT+TGG + tig0020453:14815-14834 Msa1381720:intron 30.0%
AGTCCCATTTGATGTATTAT+TGG + tig0020453:14861-14880 Msa1381720:CDS 30.0%
CGATCCAATAATACATCAAA+TGG - tig0020453:14868-14887 None:intergenic 30.0%
TGAGCGAGAATTGATTATAT+CGG + tig0020453:15008-15027 Msa1381720:CDS 30.0%
ACAATATCAGAATACAGAAG+CGG - tig0020453:15064-15083 None:intergenic 30.0%
AACATAACTGCAAATACAGA+AGG - tig0020453:15196-15215 None:intergenic 30.0%
ATGTAGAACCTTGACATTAT+TGG + tig0020453:15354-15373 Msa1381720:intron 30.0%
TAACTCTTCCAATAATGTCA+AGG - tig0020453:15365-15384 None:intergenic 30.0%
TAGTGAAAACGATGGATATA+TGG + tig0020453:15424-15443 Msa1381720:intron 30.0%
GATGGATATATGGAAAGTTT+AGG + tig0020453:15434-15453 Msa1381720:intron 30.0%
ATCCTTCCAATAATGCTTAA+CGG - tig0020453:15503-15522 None:intergenic 30.0%
TTAAGCATTATTGGAAGGAT+TGG + tig0020453:15503-15522 Msa1381720:intron 30.0%
TAAGCATTATTGGAAGGATT+GGG + tig0020453:15504-15523 Msa1381720:intron 30.0%
! AAGGATTGGGGATTTTATAA+TGG + tig0020453:15517-15536 Msa1381720:intron 30.0%
! AGGATTGGGGATTTTATAAT+GGG + tig0020453:15518-15537 Msa1381720:intron 30.0%
! ACTGTTTGTGTGAATGTTTT+GGG - tig0020453:15571-15590 None:intergenic 30.0%
! TACTGTTTGTGTGAATGTTT+TGG - tig0020453:15572-15591 None:intergenic 30.0%
! AACAGTAGTATCTAGGTTTT+TGG + tig0020453:15585-15604 Msa1381720:intron 30.0%
TCGTTTATATCTTCTTGTGT+TGG + tig0020453:15617-15636 Msa1381720:intron 30.0%
TTTATATCTTCTTGTGTTGG+TGG + tig0020453:15620-15639 Msa1381720:intron 30.0%
CCCAATCTAATGCAATTTAT+TGG + tig0020453:15689-15708 Msa1381720:intron 30.0%
GCCAATAAATTGCATTAGAT+TGG - tig0020453:15693-15712 None:intergenic 30.0%
CAAACTATTCTGACGTAAAT+TGG - tig0020453:15715-15734 None:intergenic 30.0%
TGAAAAAGCTAAATGAAAGC+AGG + tig0020453:15748-15767 Msa1381720:intron 30.0%
GAAAAAGCTAAATGAAAGCA+GGG + tig0020453:15749-15768 Msa1381720:intron 30.0%
TAAAATAATGGTCAAAGTCG+TGG + tig0020453:15965-15984 Msa1381720:intron 30.0%
GACAAAAATGGAACTTTACA+TGG + tig0020453:16069-16088 Msa1381720:CDS 30.0%
CATTGTACACAGGTAAAATA+AGG + tig0020453:16125-16144 Msa1381720:intron 30.0%
ACAGTCCAAAATATCTGAAA+AGG - tig0020453:16377-16396 None:intergenic 30.0%
TCATCAAATTCACCATCTAT+CGG - tig0020453:16538-16557 None:intergenic 30.0%
! AGAAGTACAAATAAGAACAC+AGG + tig0020453:16744-16763 Msa1381720:CDS 30.0%
TATGGATGAAAAAGGATTTC+CGG - tig0020453:16907-16926 None:intergenic 30.0%
ATTCTGTCTATGGATGAAAA+AGG - tig0020453:16915-16934 None:intergenic 30.0%
! TTTTTCATCCATAGACAGAA+TGG + tig0020453:16914-16933 Msa1381720:CDS 30.0%
! TTCTGTGTCTTTGGAAAAAT+AGG - tig0020453:17048-17067 None:intergenic 30.0%
TGCAACATTTCCATTTCTAA+TGG + tig0020453:17178-17197 Msa1381720:intron 30.0%
!! TGATAGAAGATCATTTTTCC+AGG + tig0020453:17327-17346 Msa1381720:CDS 30.0%
ACTCATAGTTACTGATAAGT+GGG + tig0020453:17534-17553 Msa1381720:intron 30.0%
GAAACAATGAACACAATTTC+TGG - tig0020453:17693-17712 None:intergenic 30.0%
! TTGATTGGTTAAAATCCACA+TGG + tig0020453:17868-17887 Msa1381720:intron 30.0%
! TGATTGGTTAAAATCCACAT+GGG + tig0020453:17869-17888 Msa1381720:intron 30.0%
TCTTACACACTTTCTTTGAT+TGG - tig0020453:17932-17951 None:intergenic 30.0%
CAGAACTAGAATAAAGAAAG+TGG - tig0020453:18266-18285 None:intergenic 30.0%
!! CACTTTCTTTATTCTAGTTC+TGG + tig0020453:18264-18283 Msa1381720:intron 30.0%
ATATTCAGATTCTTCTTGCT+CGG - tig0020453:18767-18786 None:intergenic 30.0%
AGCAAGAAGAATCTGAATAT+TGG + tig0020453:18767-18786 Msa1381720:CDS 30.0%
GCAAGAAGAATCTGAATATT+GGG + tig0020453:18768-18787 Msa1381720:CDS 30.0%
ATCGCAATCAAAATTAGACT+TGG + tig0020453:18837-18856 Msa1381720:CDS 30.0%
TTTCTTACACATTCTCCAAA+TGG + tig0020453:18920-18939 Msa1381720:intron 30.0%
TTAAATCCATGCTATGTAAC+TGG + tig0020453:19035-19054 Msa1381720:intron 30.0%
GAGAATAAAGATGATTCTCA+TGG - tig0020453:19072-19091 None:intergenic 30.0%
TGAGAAATTCTAGATCAAGT+AGG + tig0020453:19137-19156 Msa1381720:intron 30.0%
TGCAATTGTGATGTAGAAAT+CGG + tig0020453:19256-19275 Msa1381720:intron 30.0%
! TTTAAAATCTACTGGAACAC+GGG - tig0020453:19378-19397 None:intergenic 30.0%
AACCTCATAATTTCACCATT+AGG - tig0020453:19583-19602 None:intergenic 30.0%
GAAATTATGAGGTTAAAAGC+TGG + tig0020453:19589-19608 Msa1381720:CDS 30.0%
!! CCATCTTTGAGTTTTGTATT+AGG - tig0020453:19691-19710 None:intergenic 30.0%
CCTAATACAAAACTCAAAGA+TGG + tig0020453:19688-19707 Msa1381720:CDS 30.0%
GTTGAATGCAGTTAAATTGA+CGG + tig0020453:19780-19799 Msa1381720:three_prime_UTR 30.0%
TTGAATGCAGTTAAATTGAC+GGG + tig0020453:19781-19800 Msa1381720:three_prime_UTR 30.0%
!! CAGAAATATGCTGATTTGAA+AGG + tig0020453:19806-19825 Msa1381720:three_prime_UTR 30.0%
!!! TACGGTTATTGTTTTTTCCC+GGG - tig0020453:7048-7067 None:intergenic 35.0%
! TGAATTTGACGTAACGGAAA+CGG - tig0020453:7173-7192 None:intergenic 35.0%
GAGGTTTGAATTTGACGTAA+CGG - tig0020453:7179-7198 None:intergenic 35.0%
! CTACTAAGGTTGATTTCTTG+TGG + tig0020453:7361-7380 Msa1381720:CDS 35.0%
AGAAAAGAAAGAATCAGGAG+AGG - tig0020453:7411-7430 None:intergenic 35.0%
CTTACGATTTGTGATTTCGA+AGG + tig0020453:7461-7480 Msa1381720:intron 35.0%
ATGTGATTGATTGCCTTTGT+AGG + tig0020453:7526-7545 Msa1381720:intron 35.0%
!! TTGAGAGCACTCTAATACAT+CGG + tig0020453:7739-7758 Msa1381720:intron 35.0%
ACACGAGTAATCCATCAAAT+TGG - tig0020453:7768-7787 None:intergenic 35.0%
AGGATTGTTCCACTAATCAT+TGG + tig0020453:7828-7847 Msa1381720:intron 35.0%
AACACAAGACCAATGATTAG+TGG - tig0020453:7840-7859 None:intergenic 35.0%
AAGTAATTGCAACTTAGTGC+AGG + tig0020453:7914-7933 Msa1381720:intron 35.0%
TTTAGGAGTTGAGTTTACGA+AGG + tig0020453:7992-8011 Msa1381720:intron 35.0%
GTTTATTTAGACTCTCGAGT+TGG + tig0020453:8023-8042 Msa1381720:intron 35.0%
TCAAGGGTAATGTTGTAATC+TGG + tig0020453:8128-8147 Msa1381720:intron 35.0%
CATGTGTTAGAACAGTAACT+TGG - tig0020453:8325-8344 None:intergenic 35.0%
ATACCTTATGCTATGTGTGA+AGG + tig0020453:8554-8573 Msa1381720:intron 35.0%
TATTCCAGACTAGATGATGA+TGG - tig0020453:8933-8952 None:intergenic 35.0%
ATTTGTTTGAGAATACCAGC+TGG + tig0020453:9130-9149 Msa1381720:intron 35.0%
GCTTGACCCTTAATGTATAT+TGG - tig0020453:9172-9191 None:intergenic 35.0%
TCTGTTTGCTTCTACTTAAG+CGG - tig0020453:9359-9378 None:intergenic 35.0%
AGTAGAAGCAAACAGAGTAT+AGG + tig0020453:9363-9382 Msa1381720:intron 35.0%
AGCAAACAGAGTATAGGAAA+TGG + tig0020453:9369-9388 Msa1381720:intron 35.0%
TAGTGCTTGACAAGAATTTG+TGG + tig0020453:9512-9531 Msa1381720:intron 35.0%
AAGATGTTCAGGAAACATAC+TGG - tig0020453:9669-9688 None:intergenic 35.0%
ATAACTCAACCTAGAAACAC+CGG - tig0020453:10063-10082 None:intergenic 35.0%
TTCTAACACTGCTTGTATCA+TGG + tig0020453:10115-10134 Msa1381720:intron 35.0%
ATTCTCTTTAGGCATGTATG+CGG - tig0020453:10304-10323 None:intergenic 35.0%
GAAAATGGCCACATACTTAT+AGG + tig0020453:10463-10482 Msa1381720:intron 35.0%
!!! TTTGGGGAGTGTTTTAGTAT+TGG + tig0020453:10613-10632 Msa1381720:intron 35.0%
TAATCCATTCTAACCAAGTG+AGG - tig0020453:10684-10703 None:intergenic 35.0%
!! TGGTTAGAATGGATTAAGTC+AGG + tig0020453:10688-10707 Msa1381720:intron 35.0%
TGGGTGACTAAAATAAAACC+TGG - tig0020453:10817-10836 None:intergenic 35.0%
CCATAGTTATGTTAGGATGA+TGG - tig0020453:10837-10856 None:intergenic 35.0%
CCATCATCCTAACATAACTA+TGG + tig0020453:10834-10853 Msa1381720:intron 35.0%
AAGTTACACATGTCTACCAT+AGG + tig0020453:11162-11181 Msa1381720:intron 35.0%
ACTTTCTCTTTAAATAGGGG+AGG + tig0020453:11320-11339 Msa1381720:intron 35.0%
AATTCAAAACTCAGTCCCTT+TGG + tig0020453:11404-11423 Msa1381720:intron 35.0%
ATTCAAAACTCAGTCCCTTT+GGG + tig0020453:11405-11424 Msa1381720:intron 35.0%
AATAAAACATGAACTCTGGC+GGG - tig0020453:11463-11482 None:intergenic 35.0%
AGTATATTGGACAGTGGAAT+TGG + tig0020453:11601-11620 Msa1381720:intron 35.0%
ACAACATGAGAACAATGTAC+CGG + tig0020453:11745-11764 Msa1381720:intron 35.0%
CATCAGATTGAAAGAATGAG+GGG - tig0020453:11853-11872 None:intergenic 35.0%
GCATCAGATTGAAAGAATGA+GGG - tig0020453:11854-11873 None:intergenic 35.0%
TGCATCAGATTGAAAGAATG+AGG - tig0020453:11855-11874 None:intergenic 35.0%
!! AGAAGGTCATTGATTCAAAC+CGG - tig0020453:11959-11978 None:intergenic 35.0%
!!! TGTCCCACATATGGTTTTAT+TGG + tig0020453:12028-12047 Msa1381720:intron 35.0%
!!! GTCCCACATATGGTTTTATT+GGG + tig0020453:12029-12048 Msa1381720:intron 35.0%
CACCCAATAAAACCATATGT+GGG - tig0020453:12034-12053 None:intergenic 35.0%
TCACCCAATAAAACCATATG+TGG - tig0020453:12035-12054 None:intergenic 35.0%
ATCGCATACAATTCCTCTAA+GGG - tig0020453:12351-12370 None:intergenic 35.0%
TATCGCATACAATTCCTCTA+AGG - tig0020453:12352-12371 None:intergenic 35.0%
GACAATGTGTTTATAAGTGG+GGG - tig0020453:12974-12993 None:intergenic 35.0%
CCTGACAATGTGTTTATAAG+TGG - tig0020453:12977-12996 None:intergenic 35.0%
CCACTTATAAACACATTGTC+AGG + tig0020453:12974-12993 Msa1381720:intron 35.0%
TTTGTTAAAGAGTCCCACAT+CGG - tig0020453:13011-13030 None:intergenic 35.0%
! CGAAATTTTATCCATGCTTC+TGG + tig0020453:13218-13237 Msa1381720:intron 35.0%
AAATCCTTGGCATTCAATGA+GGG + tig0020453:13466-13485 Msa1381720:CDS 35.0%
AAATACCACTTAGTGGGATA+AGG - tig0020453:13652-13671 None:intergenic 35.0%
CTGAAACTTTCGAGAGAAAT+AGG + tig0020453:13715-13734 Msa1381720:intron 35.0%
ACTTTCGAGAGAAATAGGTA+CGG + tig0020453:13720-13739 Msa1381720:intron 35.0%
GAACAATGCTATTCTCCATT+GGG - tig0020453:13752-13771 None:intergenic 35.0%
ATCCTGAATATAATGCCGAA+AGG - tig0020453:13830-13849 None:intergenic 35.0%
ATTCAGGATATCTCTGCAAA+AGG + tig0020453:13841-13860 Msa1381720:intron 35.0%
! GTCACCTGTATCATATCTTT+TGG + tig0020453:13884-13903 Msa1381720:intron 35.0%
AGCACCAAAAGATATGATAC+AGG - tig0020453:13891-13910 None:intergenic 35.0%
ATGGCTATGTTATTACCAAG+GGG - tig0020453:14135-14154 None:intergenic 35.0%
!!! TTTAGTTTTATGCGCTGAGT+TGG - tig0020453:14208-14227 None:intergenic 35.0%
TTTAGATGACCATACATGGT+GGG - tig0020453:14254-14273 None:intergenic 35.0%
ATTTAGATGACCATACATGG+TGG - tig0020453:14255-14274 None:intergenic 35.0%
TACATTTGGCATAGTCTTTG+TGG - tig0020453:14393-14412 None:intergenic 35.0%
GGTCTCTAACATCAAGAAAA+AGG - tig0020453:14719-14738 None:intergenic 35.0%
!! GATTATGTCACATTGGTTTC+AGG + tig0020453:14822-14841 Msa1381720:intron 35.0%
TATTATTGGATCGGAGAAAG+CGG + tig0020453:14875-14894 Msa1381720:CDS 35.0%
CTGTATTCTGATATTGTCCA+AGG + tig0020453:15067-15086 Msa1381720:intron 35.0%
! CACAAAGCATTAGGTAAAAC+AGG - tig0020453:15099-15118 None:intergenic 35.0%
! TGCTGACTGCTATAATATTG+TGG + tig0020453:15140-15159 Msa1381720:intron 35.0%
TGTATTTGCAGTTATGTTCC+AGG + tig0020453:15198-15217 Msa1381720:intron 35.0%
!! TGCTATACAGGCTTTTTAGT+CGG - tig0020453:15245-15264 None:intergenic 35.0%
CCTTACTGTATATGCTATAC+AGG - tig0020453:15257-15276 None:intergenic 35.0%
CCTGTATAGCATATACAGTA+AGG + tig0020453:15254-15273 Msa1381720:CDS 35.0%
! AGCATATACAGTAAGGTATC+CGG + tig0020453:15261-15280 Msa1381720:intron 35.0%
CGAGAATAGCTAAAACACAA+TGG - tig0020453:15324-15343 None:intergenic 35.0%
TCCTTCCAATAATGCTTAAC+GGG - tig0020453:15502-15521 None:intergenic 35.0%
AAGCATTATTGGAAGGATTG+GGG + tig0020453:15505-15524 Msa1381720:intron 35.0%
! CTGTTTGTGTGAATGTTTTG+GGG - tig0020453:15570-15589 None:intergenic 35.0%
TCACACAAACAGTAGTATCT+AGG + tig0020453:15578-15597 Msa1381720:intron 35.0%
! GGTGCTGCATTTAAGATTAT+TGG + tig0020453:15792-15811 Msa1381720:intron 35.0%
GTAGTTGTAGGAGACAAAAA+TGG + tig0020453:16057-16076 Msa1381720:CDS 35.0%
ATATAGAAGAAAGCCTTCTG+AGG + tig0020453:16279-16298 Msa1381720:intron 35.0%
TAAACTTCCACTACAGATCA+AGG - tig0020453:16433-16452 None:intergenic 35.0%
TTCCTTATAAAGCCAATGTG+CGG - tig0020453:16883-16902 None:intergenic 35.0%
!! CATTGGCTTTATAAGGAAAC+CGG + tig0020453:16885-16904 Msa1381720:CDS 35.0%
! TGTGTCTTTGGAAAAATAGG+AGG - tig0020453:17045-17064 None:intergenic 35.0%
! TTTTTCCAAAGACACAGAAG+AGG + tig0020453:17049-17068 Msa1381720:CDS 35.0%
! ATTTTCCTCTTCTGTGTCTT+TGG - tig0020453:17057-17076 None:intergenic 35.0%
GAGCAAGAATAAGTCATTGA+AGG + tig0020453:17094-17113 Msa1381720:CDS 35.0%
AAGAATAAGTCATTGAAGGC+TGG + tig0020453:17098-17117 Msa1381720:CDS 35.0%
AAGACGAGCTACAATCAATA+TGG - tig0020453:17223-17242 None:intergenic 35.0%
! ATTTTTCCAGGATAAGCGAT+GGG + tig0020453:17339-17358 Msa1381720:CDS 35.0%
TTATGCACGGCTATACAAAA+AGG + tig0020453:17366-17385 Msa1381720:CDS 35.0%
TGCTTGTGATGAATGTTTGT+GGG + tig0020453:17437-17456 Msa1381720:intron 35.0%
TATACTTAGAAGCCAGTAAC+TGG + tig0020453:17471-17490 Msa1381720:intron 35.0%
AACTATGAGTCATACTCAAC+AGG - tig0020453:17524-17543 None:intergenic 35.0%
GACTCATAGTTACTGATAAG+TGG + tig0020453:17533-17552 Msa1381720:intron 35.0%
TACATATGCATTTCCTCTCT+CGG + tig0020453:17763-17782 Msa1381720:intron 35.0%
AAATTTATATGGGACCCATG+TGG - tig0020453:17886-17905 None:intergenic 35.0%
ACATGGGTCCCATATAAATT+TGG + tig0020453:17885-17904 Msa1381720:intron 35.0%
GGATCCCACCAAATTTATAT+GGG - tig0020453:17896-17915 None:intergenic 35.0%
TGGATCCCACCAAATTTATA+TGG - tig0020453:17897-17916 None:intergenic 35.0%
CAAATGTGCATATCCAAACA+AGG - tig0020453:18237-18256 None:intergenic 35.0%
GGATGCTAGCATCAATAATA+AGG + tig0020453:18876-18895 Msa1381720:CDS 35.0%
ACTGCCGTGTCAAATATAAT+TGG + tig0020453:18972-18991 Msa1381720:intron 35.0%
TTATGACCAGTTACATAGCA+TGG - tig0020453:19044-19063 None:intergenic 35.0%
CTCACTCTTGTCTCTTAAAT+TGG + tig0020453:19089-19108 Msa1381720:intron 35.0%
AGAATTTCTCAGTACGTGAA+TGG - tig0020453:19128-19147 None:intergenic 35.0%
GCTGTGGGAAAATCAAATTT+CGG - tig0020453:19163-19182 None:intergenic 35.0%
TTAAAATCTACTGGAACACG+GGG - tig0020453:19377-19396 None:intergenic 35.0%
ATATAACTACCACTTCTCCA+AGG - tig0020453:19555-19574 None:intergenic 35.0%
GAGAAGTGGTAGTTATATGT+TGG + tig0020453:19557-19576 Msa1381720:CDS 35.0%
! GTAGTTATATGTTGGCCTAA+TGG + tig0020453:19565-19584 Msa1381720:CDS 35.0%
!!! GGAAAACTGGTTTTGATCAA+CGG + tig0020453:19652-19671 Msa1381720:CDS 35.0%
TGAATGCAGTTAAATTGACG+GGG + tig0020453:19782-19801 Msa1381720:three_prime_UTR 35.0%
AAGGGAAAAAAATGAGGGTT+TGG + tig0020453:19825-19844 Msa1381720:three_prime_UTR 35.0%
AAAATGAGGGTTTGGATTCT+TGG + tig0020453:19833-19852 Msa1381720:three_prime_UTR 35.0%
AGAAAGGAATCTATGGTGAG+TGG - tig0020453:6962-6981 None:intergenic 40.0%
! TTTTTCCCGGGAAAATGTGA+GGG - tig0020453:7036-7055 None:intergenic 40.0%
!!! TTTTTTCCCGGGAAAATGTG+AGG - tig0020453:7037-7056 None:intergenic 40.0%
TGAGAGAAAGTGAGTGTTCA+TGG - tig0020453:7094-7113 None:intergenic 40.0%
CTTAGTAGAAAGACAAGCAC+CGG - tig0020453:7349-7368 None:intergenic 40.0%
TAGTTGTGAGCATCCTACAA+AGG - tig0020453:7542-7561 None:intergenic 40.0%
CTGGACAGTTTAATAGAGTC+AGG + tig0020453:7710-7729 Msa1381720:intron 40.0%
! GTATTAGAGTGCTCTCAAAC+AGG - tig0020453:7737-7756 None:intergenic 40.0%
!! TGAGAGCACTCTAATACATC+GGG + tig0020453:7740-7759 Msa1381720:intron 40.0%
TGGGTATGGTTCATATGTAC+CGG + tig0020453:8043-8062 Msa1381720:intron 40.0%
ACTAAGAGACGTAGGAACAA+TGG + tig0020453:8232-8251 Msa1381720:intron 40.0%
CTAAGAGACGTAGGAACAAT+GGG + tig0020453:8233-8252 Msa1381720:intron 40.0%
GTGAATGAGAAAAACCCAAG+AGG - tig0020453:8363-8382 None:intergenic 40.0%
ATCTACTCCATCCTGCATAA+TGG - tig0020453:8446-8465 None:intergenic 40.0%
! AGAAGGCTATAGCTTTTGCA+AGG + tig0020453:8584-8603 Msa1381720:CDS 40.0%
ATCCATTCTGCAGAGTTTGT+TGG - tig0020453:8850-8869 None:intergenic 40.0%
GATACCATCATCATCTAGTC+TGG + tig0020453:8926-8945 Msa1381720:intron 40.0%
CCACATACAGTGTCTGATAA+CGG - tig0020453:9096-9115 None:intergenic 40.0%
TGTTGAATATGTCCAAGGGA+TGG + tig0020453:9231-9250 Msa1381720:intron 40.0%
ATATTATTGGCACCATCCCT+TGG - tig0020453:9246-9265 None:intergenic 40.0%
ATGGAGAGACACAAATGTAG+AGG + tig0020453:9388-9407 Msa1381720:intron 40.0%
! ATGCCTTTTCCTAGAAGGTA+GGG - tig0020453:9561-9580 None:intergenic 40.0%
! AAGTCATGCCTTTTCCTAGA+AGG - tig0020453:9566-9585 None:intergenic 40.0%
!!! GGCTATTTTAGCGACAACAT+AGG - tig0020453:9749-9768 None:intergenic 40.0%
ACAGGCTGTTGAAACAATTG+TGG + tig0020453:9947-9966 Msa1381720:intron 40.0%
CTTGGTATCTTTACCAGAAC+AGG - tig0020453:10572-10591 None:intergenic 40.0%
AGTACCTCACTTGGTTAGAA+TGG + tig0020453:10677-10696 Msa1381720:intron 40.0%
!! TACTGGCTGACCTAATGTTT+TGG + tig0020453:10737-10756 Msa1381720:intron 40.0%
!!! GTTTTCACTGAACTTGTTGG+TGG + tig0020453:10784-10803 Msa1381720:intron 40.0%
TGATACTCGTCAAAGTTGCT+GGG - tig0020453:10942-10961 None:intergenic 40.0%
CATTGCACAGTTCAAACCTA+TGG - tig0020453:11181-11200 None:intergenic 40.0%
ACTTTCCCAGTAGAAGCTTT+AGG + tig0020453:11268-11287 Msa1381720:intron 40.0%
CTCAACCTAAAGCTTCTACT+GGG - tig0020453:11276-11295 None:intergenic 40.0%
ACTCAACCTAAAGCTTCTAC+TGG - tig0020453:11277-11296 None:intergenic 40.0%
TTCTCTTTAAATAGGGGAGG+AGG + tig0020453:11323-11342 Msa1381720:intron 40.0%
! TCCCTTTGGGTTACAAAACT+TGG + tig0020453:11418-11437 Msa1381720:intron 40.0%
!! GCCAAGTTTTGTAACCCAAA+GGG - tig0020453:11422-11441 None:intergenic 40.0%
!! TGCCAAGTTTTGTAACCCAA+AGG - tig0020453:11423-11442 None:intergenic 40.0%
ATAAAACATGAACTCTGGCG+GGG - tig0020453:11462-11481 None:intergenic 40.0%
AACGCAAGTATATTGGACAG+TGG + tig0020453:11595-11614 Msa1381720:intron 40.0%
AAACATAAAAGGCTCGGAAC+CGG - tig0020453:11767-11786 None:intergenic 40.0%
CTGAGGCGAATGACAAAAAT+GGG - tig0020453:11829-11848 None:intergenic 40.0%
! TCTGAGGCGAATGACAAAAA+TGG - tig0020453:11830-11849 None:intergenic 40.0%
AGTTGAACACACTGCATAGA+AGG - tig0020453:11976-11995 None:intergenic 40.0%
TATGTAGGTTGTCCCACATA+TGG + tig0020453:12019-12038 Msa1381720:intron 40.0%
TTATGCTCTGCCAATGCATA+AGG + tig0020453:12071-12090 Msa1381720:CDS 40.0%
TGTTCACTTGCTTCGAGATT+GGG + tig0020453:12129-12148 Msa1381720:CDS 40.0%
ATATGCGATTGAACGAGACA+TGG + tig0020453:12257-12276 Msa1381720:intron 40.0%
GGAATTGTATGCGATGCATT+TGG + tig0020453:12278-12297 Msa1381720:intron 40.0%
TCGCATACAATTCCTCTAAG+GGG - tig0020453:12350-12369 None:intergenic 40.0%
CTAACACAACCCCACAAAAT+CGG + tig0020453:12526-12545 Msa1381720:intron 40.0%
!! TTGTGTTAGGCCGATTTTGT+GGG - tig0020453:12539-12558 None:intergenic 40.0%
TTTCTATGTGGGGTTGTGTT+AGG - tig0020453:12660-12679 None:intergenic 40.0%
TCAACCACGATTTCTATGTG+GGG - tig0020453:12670-12689 None:intergenic 40.0%
CTCAACCACGATTTCTATGT+GGG - tig0020453:12671-12690 None:intergenic 40.0%
CTATAAGATGGGGTTGTGTT+AGG - tig0020453:12780-12799 None:intergenic 40.0%
CTAACACAACCCCATCTTAT+AGG + tig0020453:12778-12797 Msa1381720:intron 40.0%
ATCAGAGCCTCCTATAAGAT+GGG - tig0020453:12791-12810 None:intergenic 40.0%
TATCAGAGCCTCCTATAAGA+TGG - tig0020453:12792-12811 None:intergenic 40.0%
ATTAGAGCCTCCTACAAGAT+GGG - tig0020453:12885-12904 None:intergenic 40.0%
TATTAGAGCCTCCTACAAGA+TGG - tig0020453:12886-12905 None:intergenic 40.0%
TAACACAACCCCACAAAACT+GGG + tig0020453:12931-12950 Msa1381720:intron 40.0%
GCAGCAATAATAGTGCTATG+AGG + tig0020453:13247-13266 Msa1381720:intron 40.0%
AATAGTGCTATGAGGTGACA+TGG + tig0020453:13255-13274 Msa1381720:intron 40.0%
GAAAGGCAACTTGATACCTT+TGG + tig0020453:13414-13433 Msa1381720:CDS 40.0%
! GTTGAACTTTTCTCAGCCAA+AGG - tig0020453:13433-13452 None:intergenic 40.0%
CAAATCCTTGGCATTCAATG+AGG + tig0020453:13465-13484 Msa1381720:CDS 40.0%
!!! AATGCTGTTTTATGGTCCCT+TGG + tig0020453:13569-13588 Msa1381720:intron 40.0%
!!! ATGCTGTTTTATGGTCCCTT+GGG + tig0020453:13570-13589 Msa1381720:intron 40.0%
CTTTCGAGAGAAATAGGTAC+GGG + tig0020453:13721-13740 Msa1381720:intron 40.0%
CGAACAATGCTATTCTCCAT+TGG - tig0020453:13753-13772 None:intergenic 40.0%
GAGAATAGCATTGTTCGACT+TGG + tig0020453:13756-13775 Msa1381720:intron 40.0%
TGCCTTTCGGCATTATATTC+AGG + tig0020453:13825-13844 Msa1381720:intron 40.0%
AGATATGATACAGGTGACTG+TGG - tig0020453:13882-13901 None:intergenic 40.0%
AGTTGTACTGCCATTCTTCT+TGG + tig0020453:13916-13935 Msa1381720:intron 40.0%
TGGTGGAGTTATATTGAGAC+AGG + tig0020453:13939-13958 Msa1381720:intron 40.0%
! ATGAGTTGAGAGAGAAGAAG+AGG + tig0020453:14071-14090 Msa1381720:intron 40.0%
TGGCTATGTTATTACCAAGG+GGG - tig0020453:14134-14153 None:intergenic 40.0%
TGGGATATGTGATTGACACA+TGG - tig0020453:14453-14472 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + tig0020453:14679-14698 Msa1381720:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + tig0020453:14680-14699 Msa1381720:intron 40.0%
ATGTTAGAGACCCTGATGAT+TGG + tig0020453:14727-14746 Msa1381720:intron 40.0%
! ACCCTGATGATTGGTAATTG+AGG + tig0020453:14736-14755 Msa1381720:intron 40.0%
GCCTCAATTACCAATCATCA+GGG - tig0020453:14740-14759 None:intergenic 40.0%
TGCCTCAATTACCAATCATC+AGG - tig0020453:14741-14760 None:intergenic 40.0%
TCTTGTCGAAGCAATGAAGA+TGG - tig0020453:14769-14788 None:intergenic 40.0%
!! ACATTGGTTTCAGGATCTGT+TGG + tig0020453:14831-14850 Msa1381720:intron 40.0%
ATTATTGGATCGGAGAAAGC+GGG + tig0020453:14876-14895 Msa1381720:CDS 40.0%
ACAGAAGCGGTAGTGATAAT+AGG - tig0020453:15051-15070 None:intergenic 40.0%
TTGCAGTTATGTTCCAGGAA+TGG + tig0020453:15203-15222 Msa1381720:intron 40.0%
GATAATGTAACCTCCATTCC+TGG - tig0020453:15219-15238 None:intergenic 40.0%
TATCCGGCAAATTCACTTCT+TGG + tig0020453:15277-15296 Msa1381720:intron 40.0%
ATGCCAAGAAGTGAATTTGC+CGG - tig0020453:15283-15302 None:intergenic 40.0%
CGTAATGCTAGTGAAAACGA+TGG + tig0020453:15416-15435 Msa1381720:intron 40.0%
ATAATGCTTAACGGGAAGCA+TGG - tig0020453:15494-15513 None:intergenic 40.0%
TGCTTCCCGTTAAGCATTAT+TGG + tig0020453:15494-15513 Msa1381720:intron 40.0%
TCCCGTTAAGCATTATTGGA+AGG + tig0020453:15498-15517 Msa1381720:intron 40.0%
!!! GTGAATGTTTTGGGGAAATG+AGG - tig0020453:15562-15581 None:intergenic 40.0%
TGTTGTGCAGATGAAACGAA+AGG + tig0020453:15993-16012 Msa1381720:intron 40.0%
CGTGCATTAAGAGTAGTTGT+AGG + tig0020453:16045-16064 Msa1381720:CDS 40.0%
GTCTTCTTGACATTGTACAC+AGG + tig0020453:16115-16134 Msa1381720:CDS 40.0%
ACAATGAGCACACATGTTTG+TGG - tig0020453:16410-16429 None:intergenic 40.0%
TCATTGTCCTTGATCTGTAG+TGG + tig0020453:16423-16442 Msa1381720:intron 40.0%
GTCAATATATGGGGCCAATA+GGG - tig0020453:16478-16497 None:intergenic 40.0%
AGTCAATATATGGGGCCAAT+AGG - tig0020453:16479-16498 None:intergenic 40.0%
! ACTTCTAAAGGTGAGTTGTC+AGG - tig0020453:16730-16749 None:intergenic 40.0%
GTTATCATTCTGCATACCAG+AGG + tig0020453:16829-16848 Msa1381720:intron 40.0%
ATGCATGAGTATGCTGAACA+TGG + tig0020453:16852-16871 Msa1381720:CDS 40.0%
TGCATGAGTATGCTGAACAT+GGG + tig0020453:16853-16872 Msa1381720:CDS 40.0%
AGGTGTATCCATTCTGTCTA+TGG - tig0020453:16925-16944 None:intergenic 40.0%
ATCCTCATCCATAGACAGAA+TGG + tig0020453:16956-16975 Msa1381720:CDS 40.0%
ATCCATTCTGTCTATGGATG+AGG - tig0020453:16919-16938 None:intergenic 40.0%
ATCCTCGTCTATAGACAGAA+TGG + tig0020453:16998-17017 Msa1381720:CDS 40.0%
ATCCATTCTGTCTATAGACG+AGG - tig0020453:17003-17022 None:intergenic 40.0%
! TTCCTTCTACTCTAAGGACT+GGG - tig0020453:17127-17146 None:intergenic 40.0%
TGATGATAACAGCAGCAAGT+AGG - tig0020453:17154-17173 None:intergenic 40.0%
! TACTTGCTGCTGTTATCATC+AGG + tig0020453:17153-17172 Msa1381720:CDS 40.0%
! CATTTTTCCAGGATAAGCGA+TGG + tig0020453:17338-17357 Msa1381720:CDS 40.0%
CTGCTTGTGATGAATGTTTG+TGG + tig0020453:17436-17455 Msa1381720:intron 40.0%
ACAATGATCCATCCAGTTAC+TGG - tig0020453:17486-17505 None:intergenic 40.0%
TAACTGGATGGATCATTGTG+TGG + tig0020453:17487-17506 Msa1381720:intron 40.0%
TATGAGTCATACTCAACAGG+AGG - tig0020453:17521-17540 None:intergenic 40.0%
ATAGTTACTGATAAGTGGGC+AGG + tig0020453:17538-17557 Msa1381720:intron 40.0%
TAGTTACTGATAAGTGGGCA+GGG + tig0020453:17539-17558 Msa1381720:intron 40.0%
GAGAGAGGAAATGCATATGT+AGG - tig0020453:17764-17783 None:intergenic 40.0%
ACACTCACACACTCTTTGAT+TGG + tig0020453:17853-17872 Msa1381720:intron 40.0%
TGGGTCCCATATAAATTTGG+TGG + tig0020453:17888-17907 Msa1381720:intron 40.0%
GGGTCCCATATAAATTTGGT+GGG + tig0020453:17889-17908 Msa1381720:intron 40.0%
AAATACACACTGTGTCGAGA+TGG + tig0020453:18080-18099 Msa1381720:intron 40.0%
TCGAGATGGTATGTATCACA+AGG + tig0020453:18094-18113 Msa1381720:intron 40.0%
CTAGAATAAAGAAAGTGGGC+AGG - tig0020453:18261-18280 None:intergenic 40.0%
TTTCGCAGCAAGACCAATTT+GGG + tig0020453:18704-18723 Msa1381720:intron 40.0%
! TTGATAACCTGGACGAATGT+TGG - tig0020453:18739-18758 None:intergenic 40.0%
! GCTCGGTAAAATTGATAACC+TGG - tig0020453:18750-18769 None:intergenic 40.0%
CTAGCATCCATAGAAGTTGA+CGG - tig0020453:18865-18884 None:intergenic 40.0%
!! TTTTGAGAACAATGCTGTCC+TGG + tig0020453:19449-19468 Msa1381720:CDS 40.0%
TTTGAGAACAATGCTGTCCT+GGG + tig0020453:19450-19469 Msa1381720:CDS 40.0%
GGCCTAATGGTGAAATTATG+AGG + tig0020453:19578-19597 Msa1381720:CDS 40.0%
GAATGCAGTTAAATTGACGG+GGG + tig0020453:19783-19802 Msa1381720:three_prime_UTR 40.0%
GGGAGAGAAAATTGAGTGGT+TGG - tig0020453:7016-7035 None:intergenic 45.0%
GTGAGGGAGAGAAAATTGAG+TGG - tig0020453:7020-7039 None:intergenic 45.0%
! TTCTCTCCCTCACATTTTCC+CGG + tig0020453:7027-7046 Msa1381720:five_prime_UTR 45.0%
AAACGGAATCTGCGAAGAAG+TGG - tig0020453:7156-7175 None:intergenic 45.0%
!! GCAAGCATCGGAATAGTGAA+CGG - tig0020453:7203-7222 None:intergenic 45.0%
CGATTTGAGGAAGCAAGCAT+CGG - tig0020453:7215-7234 None:intergenic 45.0%
ATGCTTGCTTCCTCAAATCG+CGG + tig0020453:7215-7234 Msa1381720:CDS 45.0%
GAAGATTGAACCGCGATTTG+AGG - tig0020453:7228-7247 None:intergenic 45.0%
! ACTGCTGTTGCTATTGCTTC+CGG + tig0020453:7327-7346 Msa1381720:CDS 45.0%
CGGTGCTTGTCTTTCTACTA+AGG + tig0020453:7347-7366 Msa1381720:CDS 45.0%
!! GAGAGCACTCTAATACATCG+GGG + tig0020453:7741-7760 Msa1381720:intron 45.0%
TACATCGGGGACCAATTTGA+TGG + tig0020453:7754-7773 Msa1381720:intron 45.0%
!! TTAGACTCTCGAGTTGGGTA+TGG + tig0020453:8029-8048 Msa1381720:intron 45.0%
! GGTTCATATGTACCGGCAAA+CGG + tig0020453:8050-8069 Msa1381720:intron 45.0%
! GTTCATATGTACCGGCAAAC+GGG + tig0020453:8051-8070 Msa1381720:intron 45.0%
! AACATTACCCTTGACTCGTC+GGG - tig0020453:8122-8141 None:intergenic 45.0%
! CAACATTACCCTTGACTCGT+CGG - tig0020453:8123-8142 None:intergenic 45.0%
TGCTCTGTACTAAGAGACGT+AGG + tig0020453:8224-8243 Msa1381720:intron 45.0%
ACATGCAGGTACCATTATGC+AGG + tig0020453:8432-8451 Msa1381720:intron 45.0%
CAGGATGGAGTAGATGTTAC+TGG + tig0020453:8451-8470 Msa1381720:CDS 45.0%
CTGCCTTCACACATAGCATA+AGG - tig0020453:8560-8579 None:intergenic 45.0%
CTTATGCTATGTGTGAAGGC+AGG + tig0020453:8558-8577 Msa1381720:intron 45.0%
! GGCTATAGCTTTTGCAAGGA+AGG + tig0020453:8588-8607 Msa1381720:CDS 45.0%
!!! AGGGAGAATTTTGGCTGCAT+TGG + tig0020453:8669-8688 Msa1381720:CDS 45.0%
CGTACTCGTTTACCACTTGA+TGG - tig0020453:8697-8716 None:intergenic 45.0%
!! CATTCTGCAGAGTTTGTTGG+TGG - tig0020453:8847-8866 None:intergenic 45.0%
CACCAACAAACTCTGCAGAA+TGG + tig0020453:8845-8864 Msa1381720:intron 45.0%
CCGTTATCAGACACTGTATG+TGG + tig0020453:9093-9112 Msa1381720:intron 45.0%
!! AGAAGGTAGGGTTGGTTACA+TGG - tig0020453:9549-9568 None:intergenic 45.0%
TGTAACCAACCCTACCTTCT+AGG + tig0020453:9549-9568 Msa1381720:intron 45.0%
! CTTTTCCTAGAAGGTAGGGT+TGG - tig0020453:9557-9576 None:intergenic 45.0%
! CAACCCTACCTTCTAGGAAA+AGG + tig0020453:9555-9574 Msa1381720:intron 45.0%
! CATGCCTTTTCCTAGAAGGT+AGG - tig0020453:9562-9581 None:intergenic 45.0%
GCTGTTGAAACAATTGTGGC+TGG + tig0020453:9951-9970 Msa1381720:CDS 45.0%
GATGTCCTGTAAACTTTGGC+AGG - tig0020453:10003-10022 None:intergenic 45.0%
CCTCGATGTCCTGTAAACTT+TGG - tig0020453:10007-10026 None:intergenic 45.0%
CCAAAGTTTACAGGACATCG+AGG + tig0020453:10004-10023 Msa1381720:CDS 45.0%
GTATCATGGTTGCCAAACTC+TGG + tig0020453:10129-10148 Msa1381720:intron 45.0%
TTCAAGTGTGAGACGCACAT+TGG + tig0020453:10417-10436 Msa1381720:intron 45.0%
!! CTTGTTGGTGGAGATTTTCC+AGG + tig0020453:10796-10815 Msa1381720:intron 45.0%
GTGATACTCGTCAAAGTTGC+TGG - tig0020453:10943-10962 None:intergenic 45.0%
TCGAAGGGTAAATGTGAACC+AGG + tig0020453:11026-11045 Msa1381720:CDS 45.0%
CGAAGGGTAAATGTGAACCA+GGG + tig0020453:11027-11046 Msa1381720:CDS 45.0%
!!! TGAGTTTTGAATTCCCCGCT+GGG - tig0020453:11397-11416 None:intergenic 45.0%
TTGAAAGAATGAGGGGTCTG+AGG - tig0020453:11846-11865 None:intergenic 45.0%
! ACAGCTTGAGCCTTATGCAT+TGG - tig0020453:12084-12103 None:intergenic 45.0%
GTGTTCACTTGCTTCGAGAT+TGG + tig0020453:12128-12147 Msa1381720:CDS 45.0%
!! TCTATGCTTTGCTGTTCTGC+AGG + tig0020453:12182-12201 Msa1381720:CDS 45.0%
! AATTCCTCTAAGGGGTAGAC+AGG - tig0020453:12342-12361 None:intergenic 45.0%
TATCAGAGTCTCCTCCATGA+CGG - tig0020453:12482-12501 None:intergenic 45.0%
! CGATTTTGTGGGGTTGTGTT+AGG - tig0020453:12528-12547 None:intergenic 45.0%
!! TGTGTTAGGCCGATTTTGTG+GGG - tig0020453:12538-12557 None:intergenic 45.0%
!! GTTGTGTTAGGCCGATTTTG+TGG - tig0020453:12540-12559 None:intergenic 45.0%
CTACAAGATGGGGTTGTGTT+AGG - tig0020453:12552-12571 None:intergenic 45.0%
CTAACACAACCCCATCTTGT+AGG + tig0020453:12550-12569 Msa1381720:intron 45.0%
ATCAGAGCCTCCTACAAGAT+GGG - tig0020453:12563-12582 None:intergenic 45.0%
TATCAGAGCCTCCTACAAGA+TGG - tig0020453:12564-12583 None:intergenic 45.0%
AGATGATATCAGAGCCTCCT+AGG - tig0020453:12570-12589 None:intergenic 45.0%
ACAACCCCACATAGAAATCG+TGG + tig0020453:12663-12682 Msa1381720:intron 45.0%
GCTCAACCACGATTTCTATG+TGG - tig0020453:12672-12691 None:intergenic 45.0%
AGATGATATCAGAGCCTCCT+GGG - tig0020453:12570-12589 None:intergenic 45.0%
AAGATGATATCAGAGCCTCC+TGG - tig0020453:12571-12590 None:intergenic 45.0%
CTAACACAACCCCACAAATC+CGG + tig0020453:12742-12761 Msa1381720:intron 45.0%
GTTGTGTTAGGCCGAATCAT+GGG - tig0020453:12768-12787 None:intergenic 45.0%
ACACAACCCCATCTTATAGG+AGG + tig0020453:12781-12800 Msa1381720:intron 45.0%
TCAGAGCCTCCTATAAGATG+GGG - tig0020453:12790-12809 None:intergenic 45.0%
CTAACACAACCCCACAAAAC+CGG + tig0020453:12836-12855 Msa1381720:intron 45.0%
GTTGTGTTAGGCCGAATCAT+GGG - tig0020453:12768-12787 None:intergenic 45.0%
CTACAAGATGGGGTTGTGTT+AGG - tig0020453:12552-12571 None:intergenic 45.0%
CTAACACAACCCCATCTTGT+AGG + tig0020453:12550-12569 Msa1381720:intron 45.0%
TTAGAGCCTCCTACAAGATG+GGG - tig0020453:12884-12903 None:intergenic 45.0%
CTAACACAACCCCACAAAAC+TGG + tig0020453:12836-12855 Msa1381720:intron 45.0%
!! ACCTCACAACCCAGTTTTGT+GGG - tig0020453:12943-12962 None:intergenic 45.0%
GCTGCTTATATCCAGAAGCA+TGG - tig0020453:13232-13251 None:intergenic 45.0%
TCAAAGCATGAGAGCTGATC+TGG + tig0020453:13339-13358 Msa1381720:CDS 45.0%
TCTTCCTGAGCTTCCTATTC+TGG - tig0020453:13386-13405 None:intergenic 45.0%
!! TTTTATGGTCCCTTGGGTTG+TGG + tig0020453:13576-13595 Msa1381720:intron 45.0%
GACTGTGGCTTATCATGTCA+CGG - tig0020453:13867-13886 None:intergenic 45.0%
TGTACTGCCATTCTTCTTGG+TGG + tig0020453:13919-13938 Msa1381720:intron 45.0%
AACTCCACCACCAAGAAGAA+TGG - tig0020453:13929-13948 None:intergenic 45.0%
AATTCCTTCATTAGCCCCCT+TGG + tig0020453:14117-14136 Msa1381720:intron 45.0%
ATTACCAAGGGGGCTAATGA+AGG - tig0020453:14124-14143 None:intergenic 45.0%
AGCCATTAGCCCCTACAATA+AGG + tig0020453:14149-14168 Msa1381720:intron 45.0%
CTCCTTATTGTAGGGGCTAA+TGG - tig0020453:14154-14173 None:intergenic 45.0%
CATCACATACCCACCATGTA+TGG + tig0020453:14242-14261 Msa1381720:intron 45.0%
CTTCGACAAGACCTGTGAAA+GGG + tig0020453:14778-14797 Msa1381720:intron 45.0%
ACTTGTTCCAACCCTTTCAC+AGG - tig0020453:14792-14811 None:intergenic 45.0%
!! GGCATCGTTGGTAATTTGTG+AGG + tig0020453:14978-14997 Msa1381720:CDS 45.0%
CAGTTATGTTCCAGGAATGG+AGG + tig0020453:15206-15225 Msa1381720:intron 45.0%
! TAATGGGCAATGTCCATCCA+TGG + tig0020453:15534-15553 Msa1381720:intron 45.0%
!! AAATGAAAGCAGGGAGTGTC+AGG + tig0020453:15758-15777 Msa1381720:intron 45.0%
CTATAGCAACACTGAACTGC+AGG - tig0020453:16096-16115 None:intergenic 45.0%
! TAGAAGAAAGCCTTCTGAGG+AGG + tig0020453:16282-16301 Msa1381720:intron 45.0%
AGACTTTGGACACCGATAGA+TGG + tig0020453:16523-16542 Msa1381720:intron 45.0%
ATCCTTAATCCCAAGCCTAG+TGG + tig0020453:16562-16581 Msa1381720:CDS 45.0%
AGGTGCATCCATTCTGTCTA+TGG - tig0020453:16967-16986 None:intergenic 45.0%
TAGGAGGATGCTTCTGTTTC+AGG - tig0020453:17029-17048 None:intergenic 45.0%
! CTTCCTTCTACTCTAAGGAC+TGG - tig0020453:17128-17147 None:intergenic 45.0%
GGTGACTTCCTTCTACTCTA+AGG - tig0020453:17133-17152 None:intergenic 45.0%
CTTAGAAGCCAGTAACTGGA+TGG + tig0020453:17475-17494 Msa1381720:intron 45.0%
! AACTGCAGTTGCTTTGCAGT+CGG + tig0020453:17636-17655 Msa1381720:intron 45.0%
CAGCAGTAAGCAACTTGACA+AGG - tig0020453:17992-18011 None:intergenic 45.0%
TGCTTCAGGTGTCTGATGAA+TGG + tig0020453:18015-18034 Msa1381720:intron 45.0%
TTCAGGTGTCTGATGAATGG+TGG + tig0020453:18018-18037 Msa1381720:intron 45.0%
GATGAATGGTGGTTTGAACC+AGG + tig0020453:18029-18048 Msa1381720:intron 45.0%
TCTCAGCTATGCAGAGACAA+TGG + tig0020453:18180-18199 Msa1381720:intron 45.0%
CTTTCGCAGCAAGACCAATT+TGG + tig0020453:18703-18722 Msa1381720:intron 45.0%
CTTGGTTCCGTCAACTTCTA+TGG + tig0020453:18855-18874 Msa1381720:CDS 45.0%
ACACGGCAGTAAACAGAAGA+GGG - tig0020453:18962-18981 None:intergenic 45.0%
! ACTTTGCGTCGTGCTTTGTT+TGG - tig0020453:19507-19526 None:intergenic 45.0%
AAGCACGACGCAAAGTTTGA+TGG + tig0020453:19511-19530 Msa1381720:CDS 45.0%
TCCTCTTAACCTTGGAGAAG+TGG + tig0020453:19543-19562 Msa1381720:CDS 45.0%
ACCACTTCTCCAAGGTTAAG+AGG - tig0020453:19547-19566 None:intergenic 45.0%
GTTGATGCTGCACAAAGAAC+TGG + tig0020453:19622-19641 Msa1381720:CDS 45.0%
TGCTGCACAAAGAACTGGTT+TGG + tig0020453:19627-19646 Msa1381720:CDS 45.0%
!! TGCACAAAGAACTGGTTTGG+AGG + tig0020453:19630-19649 Msa1381720:CDS 45.0%
!! GCACAAAGAACTGGTTTGGA+GGG + tig0020453:19631-19650 Msa1381720:CDS 45.0%
!! AACTGGTTTGGAGGGAAAAC+TGG + tig0020453:19639-19658 Msa1381720:CDS 45.0%
!!! TAGTTTTTTTTTTTTTTTAA+TGG - tig0020453:10715-10734 None:intergenic 5.0%
!! TAAAATAATAAAAGTTAATT+TGG - tig0020453:18507-18526 None:intergenic 5.0%
! TCTCTCCCTCACATTTTCCC+GGG + tig0020453:7028-7047 Msa1381720:five_prime_UTR 50.0%
CATCGGAATAGTGAACGGTG+AGG - tig0020453:7198-7217 None:intergenic 50.0%
CCTGGTTGTTCGTCAGGTTT+CGG - tig0020453:7387-7406 None:intergenic 50.0%
GAAAGAATCAGGAGAGGACC+TGG - tig0020453:7405-7424 None:intergenic 50.0%
GCAGGTACCATTATGCAGGA+TGG + tig0020453:8436-8455 Msa1381720:intron 50.0%
TGTGTGAAGGCAGGTACAGA+AGG + tig0020453:8567-8586 Msa1381720:intron 50.0%
! TTTGCAAGGAAGGCACACCT+TGG + tig0020453:8598-8617 Msa1381720:CDS 50.0%
CAGATTTCCGCATTTGGCCA+AGG - tig0020453:8618-8637 None:intergenic 50.0%
CTTGGCCAAATGCGGAAATC+TGG + tig0020453:8616-8635 Msa1381720:CDS 50.0%
GATCGCCAGATTTCCGCATT+TGG - tig0020453:8624-8643 None:intergenic 50.0%
!! GCTGCATTGGTTCCATCAAG+TGG + tig0020453:8682-8701 Msa1381720:CDS 50.0%
CAGGAAACATACTGGAGACG+CGG - tig0020453:9661-9680 None:intergenic 50.0%
! GGCTGGTATTTTGCATGACG+TGG + tig0020453:9968-9987 Msa1381720:CDS 50.0%
CGACACCTGCCAAAGTTTAC+AGG + tig0020453:9995-10014 Msa1381720:CDS 50.0%
AGGACATCGAGGCAGAGTTT+GGG + tig0020453:10015-10034 Msa1381720:CDS 50.0%
! AGAAACACCGGCTACCAACT+CGG - tig0020453:10051-10070 None:intergenic 50.0%
!! AGTTGGTAGCCGGTGTTTCT+AGG + tig0020453:10051-10070 Msa1381720:CDS 50.0%
!!! TGCTGGGAGTTTTGAGCTTC+AGG - tig0020453:10926-10945 None:intergenic 50.0%
AGCTGTTACGCAGACATCGA+AGG + tig0020453:11010-11029 Msa1381720:intron 50.0%
GCTGTTACGCAGACATCGAA+GGG + tig0020453:11011-11030 Msa1381720:intron 50.0%
! AATGTGAACCAGGGTGTCCT+TGG + tig0020453:11036-11055 Msa1381720:CDS 50.0%
TCCTTGGCCAAGAAGAGGTA+TGG + tig0020453:11052-11071 Msa1381720:intron 50.0%
TCCATACCTCTTCTTGGCCA+AGG - tig0020453:11056-11075 None:intergenic 50.0%
GCAGGTTCCATACCTCTTCT+TGG - tig0020453:11062-11081 None:intergenic 50.0%
! TTAGGAGAAGATGGGGCACT+AGG + tig0020453:11361-11380 Msa1381720:intron 50.0%
CTAGGCCATACATTTCCCAG+CGG + tig0020453:11379-11398 Msa1381720:intron 50.0%
TAGGCCATACATTTCCCAGC+GGG + tig0020453:11380-11399 Msa1381720:intron 50.0%
ATTCCCCGCTGGGAAATGTA+TGG - tig0020453:11387-11406 None:intergenic 50.0%
!!! CTGAGTTTTGAATTCCCCGC+TGG - tig0020453:11398-11417 None:intergenic 50.0%
AGCTTGATGAGGACAACACG+CGG - tig0020453:11711-11730 None:intergenic 50.0%
GACGATCAGCAAGCTTGATG+AGG - tig0020453:11722-11741 None:intergenic 50.0%
TAAGGCTCAAGCTGTTGCAG+AGG + tig0020453:12089-12108 Msa1381720:CDS 50.0%
TTGCTTCGAGATTGGGTCTG+TGG + tig0020453:12136-12155 Msa1381720:CDS 50.0%
TGCTTCGAGATTGGGTCTGT+GGG + tig0020453:12137-12156 Msa1381720:CDS 50.0%
AACACCTGTCTACCCCTTAG+AGG + tig0020453:12335-12354 Msa1381720:intron 50.0%
ATAACACAACCCCGTCATGG+AGG + tig0020453:12468-12487 Msa1381720:intron 50.0%
ATCAGAGTCTCCTCCATGAC+GGG - tig0020453:12481-12500 None:intergenic 50.0%
ACACAACCCCATCTTGTAGG+AGG + tig0020453:12553-12572 Msa1381720:intron 50.0%
TCAGAGCCTCCTACAAGATG+GGG - tig0020453:12562-12581 None:intergenic 50.0%
GGTTGAGCCTAACACAACCT+AGG + tig0020453:12600-12619 Msa1381720:intron 50.0%
TGAGCCTAACACAACCTAGG+AGG + tig0020453:12603-12622 Msa1381720:intron 50.0%
AGAGCCTCCTAGGTTGTGTT+AGG - tig0020453:12610-12629 None:intergenic 50.0%
CGGATTTGTGGGGTTGTGTT+AGG - tig0020453:12744-12763 None:intergenic 50.0%
AATCATGGGCCGGATTTGTG+GGG - tig0020453:12754-12773 None:intergenic 50.0%
GAATCATGGGCCGGATTTGT+GGG - tig0020453:12755-12774 None:intergenic 50.0%
CACAAATCCGGCCCATGATT+CGG + tig0020453:12754-12773 Msa1381720:intron 50.0%
GGTTGTGTTAGGCCGAATCA+TGG - tig0020453:12769-12788 None:intergenic 50.0%
!! CGGTTTTGTGGGGTTGTGTT+AGG - tig0020453:12838-12857 None:intergenic 50.0%
!! AATCATGGGCCGGTTTTGTG+GGG - tig0020453:12848-12867 None:intergenic 50.0%
!! GAATCATGGGCCGGTTTTGT+GGG - tig0020453:12849-12868 None:intergenic 50.0%
CACAAAACCGGCCCATGATT+CGG + tig0020453:12848-12867 Msa1381720:intron 50.0%
GGTTGTGTTAGGCCGAATCA+TGG - tig0020453:12769-12788 None:intergenic 50.0%
ACACAACCCCATCTTGTAGG+AGG + tig0020453:12553-12572 Msa1381720:intron 50.0%
!! CCTCACAACCCAGTTTTGTG+GGG - tig0020453:12942-12961 None:intergenic 50.0%
! CACCTCACAACCCAGTTTTG+TGG - tig0020453:12944-12963 None:intergenic 50.0%
CAAAACTGGGTTGTGAGGTG+AGG + tig0020453:12944-12963 Msa1381720:intron 50.0%
AGGCCATCTCTTATCCGATG+TGG + tig0020453:12994-13013 Msa1381720:intron 50.0%
GGCCATCTCTTATCCGATGT+GGG + tig0020453:12995-13014 Msa1381720:intron 50.0%
GTCCCACATCGGATAAGAGA+TGG - tig0020453:13000-13019 None:intergenic 50.0%
AGCTTCCTATTCTGGCCGAA+GGG - tig0020453:13378-13397 None:intergenic 50.0%
GAGACCCTCATTGAATGCCA+AGG - tig0020453:13473-13492 None:intergenic 50.0%
TGAGGGTCTCTGCAGTATGA+AGG + tig0020453:13483-13502 Msa1381720:CDS 50.0%
GGTAGAACTTGCAAGTGCAG+AGG + tig0020453:13504-13523 Msa1381720:intron 50.0%
ACCAGAAAGCCACAACCCAA+GGG - tig0020453:13588-13607 None:intergenic 50.0%
AACCAGAAAGCCACAACCCA+AGG - tig0020453:13589-13608 None:intergenic 50.0%
!! GGGTTGTGGCTTTCTGGTTT+AGG + tig0020453:13590-13609 Msa1381720:intron 50.0%
!! TGTGGCTTTCTGGTTTAGGC+TGG + tig0020453:13594-13613 Msa1381720:intron 50.0%
CTTAGTGGGATAAGGCTTGC+TGG - tig0020453:13644-13663 None:intergenic 50.0%
! GCAAGCCTTATCCCACTAAG+TGG + tig0020453:13644-13663 Msa1381720:intron 50.0%
CGAGAGAAATAGGTACGGGA+CGG + tig0020453:13725-13744 Msa1381720:intron 50.0%
GAGAGAAATAGGTACGGGAC+GGG + tig0020453:13726-13745 Msa1381720:intron 50.0%
ACTGCCATTCTTCTTGGTGG+TGG + tig0020453:13922-13941 Msa1381720:intron 50.0%
! CTGAGTTGGCAAGTGTGTAG+TGG - tig0020453:14194-14213 None:intergenic 50.0%
!! TAGTGACCGGAGGGAGTATT+TGG + tig0020453:14689-14708 Msa1381720:intron 50.0%
GGCTTACCAAATACTCCCTC+CGG - tig0020453:14698-14717 None:intergenic 50.0%
GCTTCGACAAGACCTGTGAA+AGG + tig0020453:14777-14796 Msa1381720:intron 50.0%
GACAAGACCTGTGAAAGGGT+TGG + tig0020453:14782-14801 Msa1381720:intron 50.0%
CACGAAACCGAAGGTTGTTC+AGG + tig0020453:14939-14958 Msa1381720:CDS 50.0%
CCAGCATCCTGAACAACCTT+CGG - tig0020453:14949-14968 None:intergenic 50.0%
CGAAGGTTGTTCAGGATGCT+GGG + tig0020453:14947-14966 Msa1381720:CDS 50.0%
!! TCAGGATGCTGGGTTAGCTT+TGG + tig0020453:14957-14976 Msa1381720:CDS 50.0%
!! TGGGTTAGCTTTGGCATCGT+TGG + tig0020453:14966-14985 Msa1381720:CDS 50.0%
GGTAAAACAGGCATGTGCCT+TGG - tig0020453:15087-15106 None:intergenic 50.0%
TTTGGGGAAATGAGGAGCCA+TGG - tig0020453:15554-15573 None:intergenic 50.0%
GAGTGTCAGGAAGTGACTGA+TGG + tig0020453:15771-15790 Msa1381720:intron 50.0%
! AGAAAGCCTTCTGAGGAGGA+TGG + tig0020453:16286-16305 Msa1381720:intron 50.0%
! GAAAGCCTTCTGAGGAGGAT+GGG + tig0020453:16287-16306 Msa1381720:intron 50.0%
TTCTTCCCATCCTCCTCAGA+AGG - tig0020453:16295-16314 None:intergenic 50.0%
AGCCACTAGGCTTGGGATTA+AGG - tig0020453:16567-16586 None:intergenic 50.0%
ACCTGATAGCCACTAGGCTT+GGG - tig0020453:16574-16593 None:intergenic 50.0%
AACCTGATAGCCACTAGGCT+TGG - tig0020453:16575-16594 None:intergenic 50.0%
AGCCTAGTGGCTATCAGGTT+AGG + tig0020453:16575-16594 Msa1381720:intron 50.0%
AGCCTAACCTGATAGCCACT+AGG - tig0020453:16580-16599 None:intergenic 50.0%
TCCTTGCACACTGCAGTTGA+AGG + tig0020453:16703-16722 Msa1381720:CDS 50.0%
ACCTTCAACTGCAGTGTGCA+AGG - tig0020453:16707-16726 None:intergenic 50.0%
TTTGTCCTCACATGCTGCAG+AGG + tig0020453:16774-16793 Msa1381720:intron 50.0%
AGAAACCTCTGCAGCATGTG+AGG - tig0020453:16782-16801 None:intergenic 50.0%
CAGCATACTCATGCATCCTC+TGG - tig0020453:16848-16867 None:intergenic 50.0%
TGAGTATGCTGAACATGGGC+TGG + tig0020453:16857-16876 Msa1381720:CDS 50.0%
!! GGCCGCACATTGGCTTTATA+AGG + tig0020453:16878-16897 Msa1381720:CDS 50.0%
GACGAGGATGCTTCTGTTTC+AGG - tig0020453:16987-17006 None:intergenic 50.0%
CACCCAGTCCTTAGAGTAGA+AGG + tig0020453:17122-17141 Msa1381720:CDS 50.0%
AAGCTTCCCATCGCTTATCC+TGG - tig0020453:17348-17367 None:intergenic 50.0%
AGCGATGGGAAGCTTATGCA+CGG + tig0020453:17353-17372 Msa1381720:CDS 50.0%
!! GCTTACTGCTGACTTGCTTC+AGG + tig0020453:18001-18020 Msa1381720:intron 50.0%
TGGTGGTTTGAACCAGGACA+TGG + tig0020453:18035-18054 Msa1381720:intron 50.0%
GGTGGTTTGAACCAGGACAT+GGG + tig0020453:18036-18055 Msa1381720:intron 50.0%
GTGGTTTGAACCAGGACATG+GGG + tig0020453:18037-18056 Msa1381720:intron 50.0%
TTGAACCAGGACATGGGGAT+TGG + tig0020453:18042-18061 Msa1381720:intron 50.0%
!! TTGGTAGAAGGCGCCCAAAT+TGG - tig0020453:18720-18739 None:intergenic 50.0%
! CCTGGACGAATGTTGGTAGA+AGG - tig0020453:18732-18751 None:intergenic 50.0%
CCTTCTACCAACATTCGTCC+AGG + tig0020453:18729-18748 Msa1381720:CDS 50.0%
GTTGTATCTGCCGTGTTCGA+GGG + tig0020453:18793-18812 Msa1381720:CDS 50.0%
GACACGGCAGTAAACAGAAG+AGG - tig0020453:18963-18982 None:intergenic 50.0%
AGAACGCAATTGCTCTTCCC+AGG - tig0020453:19470-19489 None:intergenic 50.0%
! GCAAAGTTTGATGGTCCACG+TGG + tig0020453:19520-19539 Msa1381720:CDS 50.0%
GGAATAAACGGCACCGTGGA+CGG - tig0020453:7286-7305 None:intergenic 55.0%
TAGCGGAATAAACGGCACCG+TGG - tig0020453:7290-7309 None:intergenic 55.0%
CCGAAACCTGACGAACAACC+AGG + tig0020453:7384-7403 Msa1381720:CDS 55.0%
AGAGGACCTGGTTGTTCGTC+AGG - tig0020453:7393-7412 None:intergenic 55.0%
! TATGTACCGGCAAACGGGCA+AGG + tig0020453:8056-8075 Msa1381720:intron 55.0%
ATTCGACCTTGCCCGTTTGC+CGG - tig0020453:8065-8084 None:intergenic 55.0%
AACGGGCAAGGTCGAATGAG+CGG + tig0020453:8068-8087 Msa1381720:intron 55.0%
GTGGGACTTACCCTTGCACT+TGG + tig0020453:8096-8115 Msa1381720:intron 55.0%
AGGCACACCTTGGCCAAATG+CGG + tig0020453:8608-8627 Msa1381720:CDS 55.0%
CAGGACATCGAGGCAGAGTT+TGG + tig0020453:10014-10033 Msa1381720:CDS 55.0%
GGACATCGAGGCAGAGTTTG+GGG + tig0020453:10016-10035 Msa1381720:CDS 55.0%
GGCAGAGTTTGGGGATGATG+TGG + tig0020453:10025-10044 Msa1381720:CDS 55.0%
AGGCCATACATTTCCCAGCG+GGG + tig0020453:11381-11400 Msa1381720:intron 55.0%
AACATGAACTCTGGCGGGGT+TGG - tig0020453:11458-11477 None:intergenic 55.0%
GCTTGATGAGGACAACACGC+GGG - tig0020453:11710-11729 None:intergenic 55.0%
GGCATAACACAACCCCGTCA+TGG + tig0020453:12465-12484 Msa1381720:intron 55.0%
TCAGAGTCTCCTCCATGACG+GGG - tig0020453:12480-12499 None:intergenic 55.0%
GGTTGAGCCTAACACAACCC+AGG + tig0020453:12518-12537 Msa1381720:intron 55.0%
TGAGCCTAACACAACCCAGG+AGG + tig0020453:12687-12706 Msa1381720:intron 55.0%
AGAGCCTCCTGGGTTGTGTT+AGG - tig0020453:12694-12713 None:intergenic 55.0%
CGAATCATGGGCCGGATTTG+TGG - tig0020453:12756-12775 None:intergenic 55.0%
TGTTAGGCCGAATCATGGGC+CGG - tig0020453:12764-12783 None:intergenic 55.0%
!! CGAATCATGGGCCGGTTTTG+TGG - tig0020453:12850-12869 None:intergenic 55.0%
TGTTAGGCCGAATCATGGGC+CGG - tig0020453:12764-12783 None:intergenic 55.0%
CCCCACAAAACTGGGTTGTG+AGG + tig0020453:12939-12958 Msa1381720:intron 55.0%
! GAGCTGATCTGGCTTCCATG+TGG + tig0020453:13350-13369 Msa1381720:CDS 55.0%
GAGCTTCCTATTCTGGCCGA+AGG - tig0020453:13379-13398 None:intergenic 55.0%
TCGGCCAGAATAGGAAGCTC+AGG + tig0020453:13379-13398 Msa1381720:CDS 55.0%
! TCCCTTGGGTTGTGGCTTTC+TGG + tig0020453:13584-13603 Msa1381720:intron 55.0%
GGAGACATGCACGAAACCGA+AGG + tig0020453:14930-14949 Msa1381720:CDS 55.0%
CCGAAGGTTGTTCAGGATGC+TGG + tig0020453:14946-14965 Msa1381720:CDS 55.0%
GGGAAATGAGGAGCCATGGA+TGG - tig0020453:15550-15569 None:intergenic 55.0%
TCCCAAGCCTAGTGGCTATC+AGG + tig0020453:16570-16589 Msa1381720:CDS 55.0%
TGCTTTGCAGTCGGAGACGT+AGG + tig0020453:17645-17664 Msa1381720:intron 55.0%
ATGGCACAGCAGCAGACTAG+TGG - tig0020453:17789-17808 None:intergenic 55.0%
GTACACCAATCCCCATGTCC+TGG - tig0020453:18050-18069 None:intergenic 55.0%
CGTTGTATCTGCCGTGTTCG+AGG + tig0020453:18792-18811 Msa1381720:CDS 55.0%
CACTTGCTTGCCCTCGAACA+CGG - tig0020453:18806-18825 None:intergenic 55.0%
CCAAGGTTAAGAGGACCACG+TGG - tig0020453:19538-19557 None:intergenic 55.0%
CCACGTGGTCCTCTTAACCT+TGG + tig0020453:19535-19554 Msa1381720:CDS 55.0%
AGCGGCGGCGATTACATTGG+CGG - tig0020453:7250-7269 None:intergenic 60.0%
AGCAGCGGCGGCGATTACAT+TGG - tig0020453:7253-7272 None:intergenic 60.0%
! GACGGAAGCGGCTTTAGCAG+CGG - tig0020453:7268-7287 None:intergenic 60.0%
GCTAAAGCCGCTTCCGTCCA+CGG + tig0020453:7270-7289 Msa1381720:CDS 60.0%
GTCGAATGAGCGGAGCGAGT+GGG + tig0020453:8078-8097 Msa1381720:intron 60.0%
ACTCGTCGGGCCAAGTGCAA+GGG - tig0020453:8109-8128 None:intergenic 60.0%
CACTTGGCCCGACGAGTCAA+GGG + tig0020453:8112-8131 Msa1381720:intron 60.0%
TGGGGATGATGTGGCCGAGT+TGG + tig0020453:10034-10053 Msa1381720:CDS 60.0%
!! GATGTGGCCGAGTTGGTAGC+CGG + tig0020453:10041-10060 Msa1381720:CDS 60.0%
CTTCTTGGCCAAGGACACCC+TGG - tig0020453:11047-11066 None:intergenic 60.0%
GGGTGTCCTTGGCCAAGAAG+AGG + tig0020453:11047-11066 Msa1381720:CDS 60.0%
GGCTTCCATGTGGAGCCCTT+CGG + tig0020453:13360-13379 Msa1381720:CDS 60.0%
TGGAGCCCTTCGGCCAGAAT+AGG + tig0020453:13370-13389 Msa1381720:CDS 60.0%
!! AACATGGGCTGGCCGCACAT+TGG + tig0020453:16868-16887 Msa1381720:CDS 60.0%
AGCAGACTAGTGGCCGAGAG+AGG - tig0020453:17779-17798 None:intergenic 60.0%
CGTGTTCGAGGGCAAGCAAG+TGG + tig0020453:18804-18823 Msa1381720:CDS 60.0%
! GGAAGCGGCTTTAGCAGCGG+CGG - tig0020453:7265-7284 None:intergenic 65.0%
AACGGCACCGTGGACGGAAG+CGG - tig0020453:7280-7299 None:intergenic 65.0%
GGTCGAATGAGCGGAGCGAG+TGG + tig0020453:8077-8096 Msa1381720:intron 65.0%
GACTCGTCGGGCCAAGTGCA+AGG - tig0020453:8110-8129 None:intergenic 65.0%
GCACTTGGCCCGACGAGTCA+AGG + tig0020453:8111-8130 Msa1381720:intron 65.0%
TCTGGCCGAAGGGCTCCACA+TGG - tig0020453:13368-13387 None:intergenic 65.0%
TAGGTACGGGACGGGCCCAA+TGG + tig0020453:13734-13753 Msa1381720:intron 65.0%
AGTGGGCAGGGTCTCTCGAG+AGG + tig0020453:17551-17570 Msa1381720:intron 65.0%
! CTCTGGCGGGGTTGGCGCAA+TGG - tig0020453:11450-11469 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0020453 gene 6952 19974 6952 ID=Msa1381720;Name=Msa1381720
tig0020453 mRNA 6952 19974 6952 ID=Msa1381720-mRNA-1;Parent=Msa1381720;Name=Msa1381720-mRNA-1;_AED=0.10;_eAED=0.10;_QI=129|0.88|0.94|0.94|0.94|0.94|18|239|861
tig0020453 exon 6952 7405 6952 ID=Msa1381720-mRNA-1:exon:7744;Parent=Msa1381720-mRNA-1
tig0020453 exon 8440 8498 8440 ID=Msa1381720-mRNA-1:exon:7745;Parent=Msa1381720-mRNA-1
tig0020453 exon 8580 8711 8580 ID=Msa1381720-mRNA-1:exon:7746;Parent=Msa1381720-mRNA-1
tig0020453 exon 9951 10091 9951 ID=Msa1381720-mRNA-1:exon:7747;Parent=Msa1381720-mRNA-1
tig0020453 exon 11012 11068 11012 ID=Msa1381720-mRNA-1:exon:7748;Parent=Msa1381720-mRNA-1
tig0020453 exon 11666 11760 11666 ID=Msa1381720-mRNA-1:exon:7749;Parent=Msa1381720-mRNA-1
tig0020453 exon 12071 12203 12071 ID=Msa1381720-mRNA-1:exon:7750;Parent=Msa1381720-mRNA-1
tig0020453 exon 13328 13504 13328 ID=Msa1381720-mRNA-1:exon:7751;Parent=Msa1381720-mRNA-1
tig0020453 exon 14844 15034 14844 ID=Msa1381720-mRNA-1:exon:7752;Parent=Msa1381720-mRNA-1
tig0020453 exon 15209 15275 15209 ID=Msa1381720-mRNA-1:exon:7753;Parent=Msa1381720-mRNA-1
tig0020453 exon 16003 16136 16003 ID=Msa1381720-mRNA-1:exon:7754;Parent=Msa1381720-mRNA-1
tig0020453 exon 16525 16591 16525 ID=Msa1381720-mRNA-1:exon:7755;Parent=Msa1381720-mRNA-1
tig0020453 exon 16703 16765 16703 ID=Msa1381720-mRNA-1:exon:7756;Parent=Msa1381720-mRNA-1
tig0020453 exon 16849 17174 16849 ID=Msa1381720-mRNA-1:exon:7757;Parent=Msa1381720-mRNA-1
tig0020453 exon 17258 17387 17258 ID=Msa1381720-mRNA-1:exon:7758;Parent=Msa1381720-mRNA-1
tig0020453 exon 18467 18475 18467 ID=Msa1381720-mRNA-1:exon:7759;Parent=Msa1381720-mRNA-1
tig0020453 exon 18712 18897 18712 ID=Msa1381720-mRNA-1:exon:7760;Parent=Msa1381720-mRNA-1
tig0020453 exon 19442 19974 19442 ID=Msa1381720-mRNA-1:exon:7761;Parent=Msa1381720-mRNA-1
tig0020453 five_prime_UTR 6952 7080 6952 ID=Msa1381720-mRNA-1:five_prime_utr;Parent=Msa1381720-mRNA-1
tig0020453 CDS 7081 7405 7081 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 8440 8498 8440 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 8580 8711 8580 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 9951 10091 9951 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 11012 11068 11012 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 11666 11760 11666 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 12071 12203 12071 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 13328 13504 13328 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 14844 15034 14844 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 15209 15275 15209 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 16003 16136 16003 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 16525 16591 16525 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 16703 16765 16703 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 16849 17174 16849 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 17258 17387 17258 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 18467 18475 18467 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 18712 18897 18712 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 CDS 19442 19735 19442 ID=Msa1381720-mRNA-1:cds;Parent=Msa1381720-mRNA-1
tig0020453 three_prime_UTR 19736 19974 19736 ID=Msa1381720-mRNA-1:three_prime_utr;Parent=Msa1381720-mRNA-1
Gene Sequence

>Msa1381720

ATGAGAATCACCATGAACACTCACTTTCTCTCATGCGAACGTTCTACAATGTTACTTCATCAAAATTCATCTCCACTTCTTCGCAGATTCCGTTTCCGTTACGTCAAATTCAAACCTCACCGTTCACTATTCCGATGCTTGCTTCCTCAAATCGCGGTTCAATCTTCCGCCAATGTAATCGCCGCCGCTGCTAAAGCCGCTTCCGTCCACGGTGCCGTTTATTCCGCTATTAATCATGTTGCTGTTACTGCTGTTGCTATTGCTTCCGGTGCTTGTCTTTCTACTAAGGTTGATTTCTTGTGGCCGAAACCTGACGAACAACCAGGTACCATTATGCAGGATGGAGTAGATGTTACTGGCTATCCTATATTTACTGATGCAAAGGTACAGAAGGCTATAGCTTTTGCAAGGAAGGCACACCTTGGCCAAATGCGGAAATCTGGCGATCCTTATTTAGCACATTGTATTCATACAGGGAGAATTTTGGCTGCATTGGTTCCATCAAGTGGTAAACGAGCTGTTGAAACAATTGTGGCTGGTATTTTGCATGACGTGGTTGACGACACCTGCCAAAGTTTACAGGACATCGAGGCAGAGTTTGGGGATGATGTGGCCGAGTTGGTAGCCGGTGTTTCTAGGTTGAGTTATATTAATCAGCTGTTACGCAGACATCGAAGGGTAAATGTGAACCAGGGTGTCCTTGGCCAAGAAGAGGCAAGTAATTTACGAGTCATGCTTTTGGGAATGATTGATGACCCGCGTGTTGTCCTCATCAAGCTTGCTGATCGTCTTCACAACATGAGAACAATTTATGCTCTGCCAATGCATAAGGCTCAAGCTGTTGCAGAGGAGACATTAATTATTTGGTGTTCACTTGCTTCGAGATTGGGTCTGTGGGCATTGAAAGCTGAACTTGAAGATCTATGCTTTGCTGTTCTGCAGCCTCAAATATTTCAAAGCATGAGAGCTGATCTGGCTTCCATGTGGAGCCCTTCGGCCAGAATAGGAAGCTCAGGAAGATTATATGTGAAAGGCAACTTGATACCTTTGGCTGAGAAAAGTTCAACTTCTTTTTACAACAAATCCTTGGCATTCAATGAGGGTCTCTGCAGTATGAAGGATCTGTTGGAAGCTGTAGTCCCATTTGATGTATTATTGGATCGGAGAAAGCGGGCTAACTTTCTCTATAGTATTGCTAATAATGTGGAGACATGCACGAAACCGAAGGTTGTTCAGGATGCTGGGTTAGCTTTGGCATCGTTGGTAATTTGTGAGGAAGCACTTGAGCGAGAATTGATTATATCGGCTTCTTATGTTCCAGGAATGGAGGTTACATTATCAAGCCGACTAAAAAGCCTGTATAGCATATACAGTAAGATGAAACGAAAGGATACAAGCATTGATAAAGTATATGATGCACGTGCATTAAGAGTAGTTGTAGGAGACAAAAATGGAACTTTACATGGACCTGCAGTTCAGTGTTGCTATAGTCTTCTTGACATTGTACACAGACTTTGGACACCGATAGATGGTGAATTTGATGACTACATCCTTAATCCCAAGCCTAGTGGCTATCAGTCCTTGCACACTGCAGTTGAAGGTCCTGACAACTCACCTTTAGAAGTACAAATAAGAACACAGAGGATGCATGAGTATGCTGAACATGGGCTGGCCGCACATTGGCTTTATAAGGAAACCGGAAATCCTTTTTCATCCATAGACAGAATGGATACACCTGAAACAGATGCATCCTCATCCATAGACAGAATGGATGCACCTGAAACAGAAGCATCCTCGTCTATAGACAGAATGGATACACCTGAAACAGAAGCATCCTCCTATTTTTCCAAAGACACAGAAGAGGAAAATTCTTCAGATATTTTACTGAGCAAGAATAAGTCATTGAAGGCTGGACACCCAGTCCTTAGAGTAGAAGGAAGTCACCTACTTGCTGCTGTTATCATCAGTGTAGAAAATGAAGCAAGAGAATTGCTAGTTGCTGTAAGCTTTCAGCTAGCAGCTTCTGATGCAGTAGCTGATAGAAGATCATTTTTCCAGGATAAGCGATGGGAAGCTTATGCACGGCTATACAAAAAGATTAATGGTCAAGACCAATTTGGGCGCCTTCTACCAACATTCGTCCAGGTTATCAATTTTACCGAGCAAGAAGAATCTGAATATTGGGACGTTGTATCTGCCGTGTTCGAGGGCAAGCAAGTGGATTGTATTGCATCGCAATCAAAATTAGACTTGGTTCCGTCAACTTCTATGGATGCTAGCATCAATAATAAGGTGCATCTTTTGAGAACAATGCTGTCCTGGGAAGAGCAATTGCGTTCTGAAGCAAATATCAACCAAACAAAGCACGACGCAAAGTTTGATGGTCCACGTGGTCCTCTTAACCTTGGAGAAGTGGTAGTTATATGTTGGCCTAATGGTGAAATTATGAGGTTAAAAGCTGGTAGCAGTGCTGTTGATGCTGCACAAAGAACTGGTTTGGAGGGAAAACTGGTTTTGATCAACGGACATTTAGCATTGCCTAATACAAAACTCAAAGATGGCGATGTTCTTGAAGTAAGAATCTAA
Protein sequence

>Msa1381720

MRITMNTHFLSCERSTMLLHQNSSPLLRRFRFRYVKFKPHRSLFRCLLPQIAVQSSANVIAAAAKAASVHGAVYSAINHVAVTAVAIASGACLSTKVDFLWPKPDEQPGTIMQDGVDVTGYPIFTDAKVQKAIAFARKAHLGQMRKSGDPYLAHCIHTGRILAALVPSSGKRAVETIVAGILHDVVDDTCQSLQDIEAEFGDDVAELVAGVSRLSYINQLLRRHRRVNVNQGVLGQEEASNLRVMLLGMIDDPRVVLIKLADRLHNMRTIYALPMHKAQAVAEETLIIWCSLASRLGLWALKAELEDLCFAVLQPQIFQSMRADLASMWSPSARIGSSGRLYVKGNLIPLAEKSSTSFYNKSLAFNEGLCSMKDLLEAVVPFDVLLDRRKRANFLYSIANNVETCTKPKVVQDAGLALASLVICEEALERELIISASYVPGMEVTLSSRLKSLYSIYSKMKRKDTSIDKVYDARALRVVVGDKNGTLHGPAVQCCYSLLDIVHRLWTPIDGEFDDYILNPKPSGYQSLHTAVEGPDNSPLEVQIRTQRMHEYAEHGLAAHWLYKETGNPFSSIDRMDTPETDASSSIDRMDAPETEASSSIDRMDTPETEASSYFSKDTEEENSSDILLSKNKSLKAGHPVLRVEGSHLLAAVIISVENEARELLVAVSFQLAASDAVADRRSFFQDKRWEAYARLYKKINGQDQFGRLLPTFVQVINFTEQEESEYWDVVSAVFEGKQVDCIASQSKLDLVPSTSMDASINNKVHLLRTMLSWEEQLRSEANINQTKHDAKFDGPRGPLNLGEVVVICWPNGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLALPNTKLKDGDVLEVRI*