AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1228280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1228280 MtrunA17_Chr8g0335161 96.588 469 16 0 1 469 1 469 0.0 929
Msa1228280 MtrunA17_Chr8g0335141 85.075 469 69 1 1 469 4 471 0.0 824
Msa1228280 MtrunA17_Chr6g0459311 75.584 471 109 4 1 469 8 474 0.0 724
Msa1228280 MtrunA17_Chr6g0486251 74.090 467 115 4 1 465 1 463 0.0 702
Msa1228280 MtrunA17_Chr6g0486201 74.090 467 115 4 1 465 1 463 0.0 702
Msa1228280 MtrunA17_Chr8g0361371 59.408 473 175 9 3 465 4 469 0.0 539
Msa1228280 MtrunA17_Chr8g0334831 56.818 484 183 10 1 465 1 477 0.0 515
Msa1228280 MtrunA17_Chr7g0232341 46.316 475 241 9 1 468 1 468 1.81e-142 416
Msa1228280 MtrunA17_Chr7g0232311 48.394 467 228 9 1 462 1 459 4.00e-141 413
Msa1228280 MtrunA17_Chr7g0232391 46.737 475 240 8 1 469 1 468 1.15e-140 412
Msa1228280 MtrunA17_Chr7g0232401 46.849 476 234 11 1 466 1 467 7.61e-140 410
Msa1228280 MtrunA17_Chr7g0232411 45.684 475 245 8 1 469 1 468 1.10e-137 404
Msa1228280 MtrunA17_Chr7g0232331 44.937 474 247 9 1 467 1 467 9.67e-137 402
Msa1228280 MtrunA17_Chr8g0336741 45.648 471 244 8 4 469 11 474 7.21e-136 400
Msa1228280 MtrunA17_Chr8g0336731 46.352 466 238 8 9 469 35 493 1.39e-133 395
Msa1228280 MtrunA17_Chr8g0347281 46.004 463 236 10 7 465 19 471 6.64e-133 392
Msa1228280 MtrunA17_Chr1g0153451 44.726 474 249 9 1 469 1 466 1.64e-132 391
Msa1228280 MtrunA17_Chr7g0275511 45.416 469 242 10 7 468 16 477 8.77e-132 389
Msa1228280 MtrunA17_Chr8g0373301 45.053 475 236 12 5 468 8 468 1.96e-130 385
Msa1228280 MtrunA17_Chr8g0336651 47.257 474 238 8 1 469 1 467 4.08e-130 406
Msa1228280 MtrunA17_Chr8g0336651 46.218 476 240 10 3 469 778 1246 4.58e-130 406
Msa1228280 MtrunA17_Chr8g0336651 42.560 336 145 5 137 469 487 777 3.33e-72 248
Msa1228280 MtrunA17_Chr8g0347271 44.492 463 243 10 7 465 20 472 1.88e-129 384
Msa1228280 MtrunA17_Chr8g0336691 46.849 476 239 9 1 469 8 476 2.29e-129 407
Msa1228280 MtrunA17_Chr8g0336691 44.937 474 247 9 3 469 916 1382 1.74e-121 385
Msa1228280 MtrunA17_Chr8g0336691 42.797 472 232 9 3 469 477 915 1.17e-112 361
Msa1228280 MtrunA17_Chr6g0449931 45.188 478 245 11 1 469 1 470 2.37e-126 375
Msa1228280 MtrunA17_Chr8g0339451 44.280 472 246 8 9 469 1 466 1.37e-124 370
Msa1228280 MtrunA17_Chr8g0339461 42.946 482 254 9 1 469 1 474 2.06e-122 365
Msa1228280 MtrunA17_Chr8g0334851 44.050 479 243 12 1 465 1 468 4.03e-121 362
Msa1228280 MtrunA17_Chr8g0334861 42.405 474 252 12 1 465 1 462 5.62e-121 362
Msa1228280 MtrunA17_Chr8g0339631 42.917 480 254 10 1 469 1 471 1.74e-117 353
Msa1228280 MtrunA17_Chr8g0339441 41.545 479 223 9 1 469 1 432 3.54e-111 335
Msa1228280 MtrunA17_Chr8g0339601 50.592 338 154 6 140 469 1 333 6.38e-110 328
Msa1228280 MtrunA17_Chr7g0232351 45.833 384 197 7 1 379 1 378 8.31e-106 319
Msa1228280 MtrunA17_Chr8g0370941 37.602 492 265 13 3 463 5 485 4.80e-95 296
Msa1228280 MtrunA17_Chr5g0403641 34.959 492 259 14 1 468 54 508 3.91e-87 276
Msa1228280 MtrunA17_Chr3g0079731 35.833 480 286 8 1 462 1 476 5.16e-86 272
Msa1228280 MtrunA17_Chr1g0153461 58.411 214 87 2 257 469 3 215 9.71e-83 254
Msa1228280 MtrunA17_Chr6g0462531 35.404 483 266 12 4 463 2 461 4.98e-80 256
Msa1228280 MtrunA17_Chr6g0462521 33.475 472 276 9 4 463 2 447 8.25e-80 255
Msa1228280 MtrunA17_Chr6g0462551 34.656 479 275 11 4 463 2 461 1.72e-78 252
Msa1228280 MtrunA17_Chr6g0462541 33.544 474 280 11 7 463 5 460 1.80e-73 239
Msa1228280 MtrunA17_Chr5g0442541 31.667 480 288 16 3 462 2 461 4.08e-71 233
Msa1228280 MtrunA17_Chr5g0442581 33.063 493 275 14 3 462 2 472 3.10e-70 232
Msa1228280 MtrunA17_Chr5g0429681 33.475 469 266 16 1 447 39 483 6.80e-70 230
Msa1228280 MtrunA17_Chr6g0462571 31.013 474 296 10 4 463 2 458 1.09e-69 229
Msa1228280 MtrunA17_Chr5g0448521 31.524 479 292 15 3 462 2 463 1.13e-69 229
Msa1228280 MtrunA17_Chr5g0442491 32.432 481 292 12 3 462 2 470 1.17e-69 229
Msa1228280 MtrunA17_Chr5g0442561 31.707 492 291 16 3 468 2 474 4.75e-68 225
Msa1228280 MtrunA17_Chr2g0302991 32.505 483 277 16 7 466 6 462 6.68e-67 221
Msa1228280 MtrunA17_Chr2g0302961 31.417 487 286 14 4 466 3 465 8.05e-66 219
Msa1228280 MtrunA17_Chr5g0429711 32.099 486 272 18 1 462 6 457 1.11e-65 218
Msa1228280 MtrunA17_Chr5g0442521 31.056 483 297 14 3 462 2 471 1.09e-64 216
Msa1228280 MtrunA17_Chr5g0442601 30.658 486 296 14 3 462 401 871 5.61e-62 216
Msa1228280 MtrunA17_Chr5g0442601 31.714 350 199 8 61 402 16 333 3.66e-41 157
Msa1228280 MtrunA17_Chr4g0044511 32.172 488 281 16 2 462 36 500 4.37e-58 199
Msa1228280 MtrunA17_Chr8g0366391 30.081 492 296 12 6 469 9 480 5.94e-57 196
Msa1228280 MtrunA17_Chr5g0442511 29.140 477 288 13 3 462 46 489 1.60e-56 195
Msa1228280 MtrunA17_Chr5g0426431 33.000 500 256 22 5 462 11 473 3.29e-56 194
Msa1228280 MtrunA17_Chr3g0092641 31.263 499 264 21 6 462 12 473 4.82e-53 185
Msa1228280 MtrunA17_Chr5g0420801 31.148 488 283 16 2 467 3 459 2.43e-52 183
Msa1228280 MtrunA17_Chr4g0053501 29.810 473 299 14 7 466 12 464 5.96e-52 183
Msa1228280 MtrunA17_Chr7g0265041 31.828 487 275 16 6 455 11 477 2.01e-51 181
Msa1228280 MtrunA17_Chr3g0078841 30.242 496 269 20 2 455 6 466 2.03e-51 181
Msa1228280 MtrunA17_Chr3g0112771 30.818 477 279 16 1 462 7 447 2.63e-51 180
Msa1228280 MtrunA17_Chr8g0369341 32.158 482 286 16 2 462 3 464 6.29e-51 179
Msa1228280 MtrunA17_Chr7g0265051 29.532 491 293 14 4 460 7 478 8.54e-51 180
Msa1228280 MtrunA17_Chr7g0265141 28.980 490 288 15 4 455 7 474 1.58e-50 179
Msa1228280 MtrunA17_Chr7g0243871 38.163 283 150 7 191 459 194 465 8.78e-50 177
Msa1228280 MtrunA17_Chr7g0265151 28.398 493 269 19 12 456 17 473 1.08e-49 176
Msa1228280 MtrunA17_Chr4g0044521 36.013 311 165 9 177 462 161 462 1.28e-49 176
Msa1228280 MtrunA17_Chr4g0066151 36.691 278 142 10 210 462 207 475 2.68e-49 175
Msa1228280 MtrunA17_Chr7g0265101 29.352 494 292 15 4 460 7 480 3.72e-49 175
Msa1228280 MtrunA17_Chr7g0275681 30.533 488 281 16 1 455 7 469 7.19e-49 174
Msa1228280 MtrunA17_Chr4g0066281 38.376 271 141 8 211 462 199 462 1.03e-48 174
Msa1228280 MtrunA17_Chr4g0066221 27.789 493 303 15 1 462 6 476 1.16e-48 174
Msa1228280 MtrunA17_Chr4g0044501 32.126 414 232 13 70 462 86 471 1.36e-48 173
Msa1228280 MtrunA17_Chr6g0454341 29.116 498 286 19 2 462 6 473 3.22e-48 172
Msa1228280 MtrunA17_Chr8g0374901 30.738 488 280 20 7 462 13 474 4.33e-48 172
Msa1228280 MtrunA17_Chr4g0042891 32.017 481 263 21 6 460 7 449 5.09e-48 171
Msa1228280 MtrunA17_Chr7g0243771 29.980 497 287 18 1 462 1 471 5.23e-48 172
Msa1228280 MtrunA17_Chr5g0414331 27.629 485 295 12 2 468 9 455 6.11e-48 171
Msa1228280 MtrunA17_Chr7g0243781 38.433 268 138 7 211 462 215 471 1.16e-47 171
Msa1228280 MtrunA17_Chr3g0079711 48.663 187 83 3 284 462 3 184 1.37e-47 162
Msa1228280 MtrunA17_Chr6g0464881 27.893 484 280 16 2 459 7 447 1.66e-47 170
Msa1228280 MtrunA17_Chr4g0042931 30.882 476 299 13 6 468 7 465 2.06e-47 170
Msa1228280 MtrunA17_Chr6g0454401 28.685 502 286 17 2 462 6 476 2.15e-47 170
Msa1228280 MtrunA17_Chr7g0217881 32.836 335 187 10 147 462 142 457 2.25e-47 170
Msa1228280 MtrunA17_Chr5g0440421 29.184 490 294 14 3 456 7 479 2.82e-47 170
Msa1228280 MtrunA17_Chr2g0278711 30.691 492 282 20 3 462 8 472 2.83e-47 170
Msa1228280 MtrunA17_Chr5g0426401 35.890 326 163 15 161 468 12 309 3.73e-47 165
Msa1228280 MtrunA17_Chr2g0329111 29.314 481 261 17 1 440 1 443 3.96e-47 169
Msa1228280 MtrunA17_Chr4g0014061 35.000 280 149 5 211 468 206 474 4.24e-47 169
Msa1228280 MtrunA17_Chr6g0464921 34.586 266 146 5 205 459 200 448 8.20e-47 168
Msa1228280 MtrunA17_Chr5g0414321 27.273 484 298 12 2 468 7 453 8.74e-47 168
Msa1228280 MtrunA17_Chr8g0377921 28.600 493 277 15 7 462 5 459 8.91e-47 168
Msa1228280 MtrunA17_Chr6g0463861 34.021 291 162 9 197 462 184 469 1.17e-46 168
Msa1228280 MtrunA17_Chr3g0118671 27.711 498 295 17 1 462 1 469 1.23e-46 168
Msa1228280 MtrunA17_Chr6g0454261 32.095 377 212 14 106 462 123 475 1.55e-46 168
Msa1228280 MtrunA17_Chr8g0359821 29.006 493 291 15 3 462 7 473 1.60e-46 168
Msa1228280 MtrunA17_Chr8g0374971 35.395 291 158 8 197 462 191 476 2.10e-46 167
Msa1228280 MtrunA17_Chr4g0050341 28.543 508 284 18 4 466 17 490 7.34e-46 166
Msa1228280 MtrunA17_Chr1g0179901 30.120 498 269 23 6 455 16 482 8.22e-46 166
Msa1228280 MtrunA17_Chr4g0032331 30.126 478 277 16 4 462 6 445 8.80e-46 165
Msa1228280 MtrunA17_Chr7g0243801 29.735 491 284 18 7 462 8 472 9.15e-46 166
Msa1228280 MtrunA17_Chr6g0454151 36.393 305 159 13 171 462 191 473 1.14e-45 165
Msa1228280 MtrunA17_Chr4g0053321 36.704 267 146 10 199 455 215 468 1.57e-45 166
Msa1228280 MtrunA17_Chr7g0218811 31.429 420 228 15 62 462 67 445 1.69e-45 164
Msa1228280 MtrunA17_Chr6g0464871 28.980 490 288 18 3 469 17 469 3.93e-45 164
Msa1228280 MtrunA17_Chr6g0464841 29.713 488 279 20 4 466 6 454 4.69e-45 163
Msa1228280 MtrunA17_Chr6g0454201 34.228 298 163 10 171 455 192 469 5.44e-45 164
Msa1228280 MtrunA17_Chr6g0454271 34.237 295 154 9 178 455 4 275 5.44e-45 159
Msa1228280 MtrunA17_Chr6g0453951 32.323 297 170 10 171 455 238 515 5.97e-45 164
Msa1228280 MtrunA17_Chr8g0367221 29.039 458 287 11 3 443 1285 1721 1.52e-44 167
Msa1228280 MtrunA17_Chr8g0367221 28.384 458 290 13 3 443 795 1231 9.23e-42 159
Msa1228280 MtrunA17_Chr8g0367221 27.729 458 292 11 3 443 9 444 9.78e-39 150
Msa1228280 MtrunA17_Chr7g0249961 36.400 250 129 6 231 468 30 261 1.73e-44 157
Msa1228280 MtrunA17_Chr7g0249981 27.789 493 281 17 4 468 23 468 2.02e-44 162
Msa1228280 MtrunA17_Chr7g0243681 28.600 493 288 17 6 462 11 475 3.03e-44 162
Msa1228280 MtrunA17_Chr6g0454141 32.361 377 211 15 106 462 123 475 3.30e-44 161
Msa1228280 MtrunA17_Chr2g0278721 29.130 460 286 14 2 441 513 952 3.55e-44 166
Msa1228280 MtrunA17_Chr2g0278721 27.790 457 287 13 2 441 11 441 2.05e-37 146
Msa1228280 MtrunA17_Chr6g0454301 27.767 497 294 18 2 462 259 726 4.06e-44 165
Msa1228280 MtrunA17_Chr6g0454301 34.167 240 130 6 234 462 3 225 3.44e-35 139
Msa1228280 MtrunA17_Chr6g0449991 34.503 342 190 12 1 333 1 317 4.51e-44 157
Msa1228280 MtrunA17_Chr8g0337381 58.779 131 51 2 339 469 1 128 5.22e-44 151
Msa1228280 MtrunA17_Chr3g0112761 28.452 478 295 14 3 466 5 449 5.62e-44 160
Msa1228280 MtrunA17_Chr6g0463851 32.899 307 179 10 185 469 184 485 6.57e-44 161
Msa1228280 MtrunA17_Chr6g0454191 29.006 493 282 18 2 455 6 469 7.18e-44 160
Msa1228280 MtrunA17_Chr4g0060511 36.559 279 143 6 211 466 220 487 8.29e-44 160
Msa1228280 MtrunA17_Chr1g0173121 34.528 307 183 8 164 462 162 458 8.54e-44 160
Msa1228280 MtrunA17_Chr6g0454121 33.882 304 170 9 171 462 190 474 1.71e-43 159
Msa1228280 MtrunA17_Chr8g0336331 28.457 499 287 19 2 462 6 472 2.80e-43 159
Msa1228280 MtrunA17_Chr8g0374941 36.462 277 142 10 211 462 1146 1413 3.21e-43 163
Msa1228280 MtrunA17_Chr8g0374941 34.211 266 141 10 211 451 208 464 4.69e-40 154
Msa1228280 MtrunA17_Chr8g0374941 36.293 259 139 8 211 448 673 926 5.24e-40 154
Msa1228280 MtrunA17_Chr6g0454211 31.250 368 213 11 106 455 410 755 4.68e-43 162
Msa1228280 MtrunA17_Chr6g0454211 30.603 232 102 11 160 379 52 236 3.53e-21 97.1
Msa1228280 MtrunA17_Chr7g0243631 29.091 495 276 19 11 462 20 482 4.69e-43 159
Msa1228280 MtrunA17_Chr4g0066201 32.026 306 180 9 178 462 172 470 6.25e-43 158
Msa1228280 MtrunA17_Chr7g0243931 28.175 504 289 14 2 462 13 486 8.35e-43 158
Msa1228280 MtrunA17_Chr4g0011051 29.249 506 276 19 1 456 4 477 8.40e-43 158
Msa1228280 MtrunA17_Chr7g0218831 28.795 448 265 15 10 442 10 418 1.00e-42 156
Msa1228280 MtrunA17_Chr8g0350881 36.630 273 147 8 211 462 209 476 1.05e-42 157
Msa1228280 MtrunA17_Chr4g0066131 33.577 274 156 8 210 462 202 470 1.22e-42 157
Msa1228280 MtrunA17_Chr3g0121991 28.958 518 288 25 5 461 42 540 1.34e-42 158
Msa1228280 MtrunA17_Chr6g0454321 31.143 350 197 14 122 449 133 460 1.46e-42 159
Msa1228280 MtrunA17_Chr8g0361411 28.866 485 288 19 4 467 6 454 1.60e-42 156
Msa1228280 MtrunA17_Chr3g0118691 26.939 490 309 14 1 462 10 478 1.95e-42 157
Msa1228280 MtrunA17_Chr6g0454131 34.539 304 168 11 171 462 190 474 2.27e-42 156
Msa1228280 MtrunA17_Chr7g0218311 35.662 272 151 7 210 462 213 479 2.61e-42 156
Msa1228280 MtrunA17_Chr6g0482061 28.025 471 292 17 5 446 10 462 3.22e-42 156
Msa1228280 MtrunA17_Chr4g0066171 32.353 306 179 10 178 462 174 472 3.25e-42 156
Msa1228280 MtrunA17_Chr6g0454291 34.007 297 165 10 171 455 188 465 4.04e-42 155
Msa1228280 MtrunA17_Chr1g0159551 32.990 291 181 6 179 462 172 455 4.61e-42 155
Msa1228280 MtrunA17_Chr8g0377941 28.151 476 290 15 7 459 8 454 5.29e-42 155
Msa1228280 MtrunA17_Chr7g0243951 26.653 499 302 12 2 462 7 479 5.34e-42 155
Msa1228280 MtrunA17_Chr4g0066261 32.899 307 179 10 178 462 176 477 5.38e-42 155
Msa1228280 MtrunA17_Chr3g0118701 27.347 490 307 15 1 462 10 478 6.34e-42 155
Msa1228280 MtrunA17_Chr5g0431441 29.046 482 279 16 6 462 18 461 6.83e-42 155
Msa1228280 MtrunA17_Chr1g0207981 33.010 309 180 9 162 459 173 465 7.00e-42 155
Msa1228280 MtrunA17_Chr5g0412111 30.939 362 217 11 114 462 116 457 7.76e-42 154
Msa1228280 MtrunA17_Chr3g0118771 26.547 501 309 17 2 468 17 492 1.38e-41 154
Msa1228280 MtrunA17_Chr2g0294941 31.492 362 204 15 121 457 28 370 1.70e-41 152
Msa1228280 MtrunA17_Chr5g0419771 35.581 267 140 8 211 455 245 501 1.77e-41 154
Msa1228280 MtrunA17_Chr7g0218821 29.737 380 218 13 92 459 101 443 2.02e-41 153
Msa1228280 MtrunA17_Chr5g0419761 32.162 370 199 14 123 462 134 481 2.63e-41 154
Msa1228280 MtrunA17_Chr5g0431361 27.869 488 279 19 2 462 8 449 3.90e-41 152
Msa1228280 MtrunA17_Chr6g0464861 35.055 271 143 8 209 466 203 453 6.50e-41 152
Msa1228280 MtrunA17_Chr3g0118661 29.399 466 253 18 2 426 9 439 6.98e-41 152
Msa1228280 MtrunA17_Chr6g0454331 32.323 297 171 7 178 462 196 474 8.12e-41 152
Msa1228280 MtrunA17_Chr5g0401721 29.912 341 201 12 136 462 150 466 8.34e-41 152
Msa1228280 MtrunA17_Chr3g0118721 32.667 300 165 10 180 462 6 285 8.78e-41 147
Msa1228280 MtrunA17_Chr5g0423981 32.566 304 174 10 171 462 156 440 1.09e-40 151
Msa1228280 MtrunA17_Chr4g0044481 36.404 228 124 4 211 429 209 424 1.09e-40 150
Msa1228280 MtrunA17_Chr7g0218791 27.975 479 261 18 10 455 9 436 1.10e-40 151
Msa1228280 MtrunA17_Chr6g0454181 31.987 297 171 10 171 455 191 468 1.21e-40 152
Msa1228280 MtrunA17_Chr8g0355221 39.912 228 121 4 250 469 270 489 1.23e-40 152
Msa1228280 MtrunA17_Chr6g0453961 31.212 330 184 10 145 462 187 485 1.38e-40 152
Msa1228280 MtrunA17_Chr7g0235051 35.793 271 141 6 211 459 187 446 1.77e-40 151
Msa1228280 MtrunA17_Chr2g0294921 35.662 272 150 8 211 462 360 626 2.39e-40 153
Msa1228280 MtrunA17_Chr2g0294931 35.662 272 150 8 211 462 211 477 3.28e-40 150
Msa1228280 MtrunA17_Chr5g0412101 29.275 386 226 12 99 462 106 466 3.83e-40 150
Msa1228280 MtrunA17_Chr1g0207861 34.875 281 158 7 200 468 203 470 4.22e-40 150
Msa1228280 MtrunA17_Chr8g0365811 30.334 389 228 15 94 462 588 953 4.43e-40 154
Msa1228280 MtrunA17_Chr8g0365811 31.949 313 188 9 130 431 142 440 3.50e-38 148
Msa1228280 MtrunA17_Chr7g0218841 28.355 462 258 19 6 442 6 419 5.28e-40 149
Msa1228280 MtrunA17_Chr5g0428081 27.027 481 309 14 7 462 12 475 6.83e-40 150
Msa1228280 MtrunA17_Chr1g0161351 30.867 392 239 12 83 462 122 493 7.81e-40 150
Msa1228280 MtrunA17_Chr8g0334841 49.315 146 70 3 171 314 1 144 8.01e-40 141
Msa1228280 MtrunA17_Chr3g0122001 31.217 378 217 15 111 462 109 469 8.41e-40 153
Msa1228280 MtrunA17_Chr3g0122001 32.011 378 213 16 111 462 589 948 9.95e-40 153
Msa1228280 MtrunA17_Chr2g0278741 28.665 457 283 14 2 441 93 523 9.77e-40 150
Msa1228280 MtrunA17_Chr8g0382021 31.551 374 221 10 99 462 136 484 1.01e-39 149
Msa1228280 MtrunA17_Chr1g0207951 34.363 259 141 7 214 462 865 1104 1.58e-39 152
Msa1228280 MtrunA17_Chr1g0207951 31.481 270 153 6 204 462 318 566 1.89e-37 146
Msa1228280 MtrunA17_Chr8g0380531 27.443 481 296 15 6 466 10 457 1.82e-39 148
Msa1228280 MtrunA17_Chr4g0069611 29.670 455 274 15 3 441 12 436 2.01e-39 148
Msa1228280 MtrunA17_Chr3g0118711 27.419 496 295 18 3 462 10 476 2.63e-39 148
Msa1228280 MtrunA17_Chr1g0207931 29.863 365 199 12 136 462 148 493 3.43e-39 148
Msa1228280 MtrunA17_Chr7g0243711 40.092 217 108 4 257 462 107 312 3.74e-39 144
Msa1228280 MtrunA17_Chr3g0098111 32.616 279 167 6 200 468 204 471 4.65e-39 147
Msa1228280 MtrunA17_Chr7g0249931 38.424 203 106 5 258 459 292 476 6.08e-39 147
Msa1228280 MtrunA17_Chr6g0454361 31.908 304 176 9 171 462 192 476 7.77e-39 147
Msa1228280 MtrunA17_Chr7g0243851 35.740 277 140 8 211 462 175 438 1.05e-38 146
Msa1228280 MtrunA17_Chr6g0452771 32.566 304 174 8 171 462 191 475 1.20e-38 146
Msa1228280 MtrunA17_Chr1g0207971 29.213 356 209 13 122 462 122 449 1.39e-38 145
Msa1228280 MtrunA17_Chr7g0250001 27.291 491 294 19 1 469 1 450 1.46e-38 145
Msa1228280 MtrunA17_Chr4g0072761 34.397 282 162 7 182 462 189 448 1.51e-38 145
Msa1228280 MtrunA17_Chr5g0412131 26.667 480 303 15 6 462 12 465 1.74e-38 145
Msa1228280 MtrunA17_Chr4g0029131 27.778 450 288 12 1 440 7 429 1.75e-38 148
Msa1228280 MtrunA17_Chr6g0454221 35.043 234 123 7 234 455 3 219 3.33e-38 141
Msa1228280 MtrunA17_Chr3g0106251 31.469 286 163 8 179 455 21 282 1.51e-37 139
Msa1228280 MtrunA17_Chr7g0243861 36.594 276 139 7 211 462 220 483 1.66e-37 143
Msa1228280 MtrunA17_Chr1g0165701 37.391 230 122 4 250 469 269 486 2.12e-37 143
Msa1228280 MtrunA17_Chr8g0374931 34.717 265 148 9 211 455 211 470 2.24e-37 143
Msa1228280 MtrunA17_Chr5g0401851 37.727 220 120 3 257 468 275 485 3.61e-37 142
Msa1228280 MtrunA17_Chr4g0072771 32.281 285 172 5 178 462 198 461 1.10e-36 140
Msa1228280 MtrunA17_Chr7g0243761 26.923 494 270 17 6 445 11 467 1.56e-36 140
Msa1228280 MtrunA17_Chr5g0416741 26.884 491 307 13 7 466 14 483 1.72e-36 140
Msa1228280 MtrunA17_Chr7g0243811 39.594 197 103 4 211 402 190 375 2.95e-36 138
Msa1228280 MtrunA17_Chr7g0243911 41.500 200 93 5 258 446 22 208 6.02e-36 132
Msa1228280 MtrunA17_Chr7g0241781 27.033 455 262 14 3 442 6 405 6.64e-36 137
Msa1228280 MtrunA17_Chr3g0118751 26.078 510 273 17 1 468 1 448 1.43e-35 137
Msa1228280 MtrunA17_Chr5g0410941 31.183 279 167 7 211 469 219 492 1.68e-35 137
Msa1228280 MtrunA17_Chr3g0106231 25.949 474 278 15 5 455 17 440 1.81e-35 137
Msa1228280 MtrunA17_Chr5g0431401 25.988 481 286 18 6 462 10 444 2.61e-35 136
Msa1228280 MtrunA17_Chr7g0265111 37.327 217 113 5 258 462 306 511 4.14e-35 137
Msa1228280 MtrunA17_Chr5g0432731 30.605 281 167 6 191 462 31 292 7.27e-35 132
Msa1228280 MtrunA17_Chr4g0029151 25.561 446 303 9 1 440 15 437 8.70e-35 135
Msa1228280 MtrunA17_Chr5g0409591 33.824 272 151 7 211 462 212 474 1.43e-34 135
Msa1228280 MtrunA17_Chr6g0454171 31.159 276 143 8 201 462 63 305 1.46e-34 131
Msa1228280 MtrunA17_Chr5g0393591 32.400 250 128 7 213 462 223 431 1.59e-34 134
Msa1228280 MtrunA17_Chr7g0243611 36.327 245 121 8 196 419 66 296 1.68e-34 130
Msa1228280 MtrunA17_Chr7g0241801 27.033 455 262 14 3 442 6 405 2.25e-34 133
Msa1228280 MtrunA17_Chr6g0454351 29.022 317 174 10 161 462 180 460 2.26e-34 134
Msa1228280 MtrunA17_Chr6g0466831 27.623 467 286 15 3 451 15 447 2.86e-34 134
Msa1228280 MtrunA17_Chr1g0207831 31.071 280 158 7 197 462 201 459 4.77e-34 133
Msa1228280 MtrunA17_Chr8g0336321 26.998 463 280 13 6 440 7 439 1.95e-33 131
Msa1228280 MtrunA17_Chr5g0431421 25.786 477 292 18 6 462 10 444 3.04e-33 130
Msa1228280 MtrunA17_Chr2g0307961 29.474 380 211 11 111 466 122 468 5.69e-33 130
Msa1228280 MtrunA17_Chr6g0464091 26.797 459 293 14 2 442 14 447 7.16e-33 130
Msa1228280 MtrunA17_Chr8g0355011 30.029 343 180 11 106 441 47 336 8.82e-33 127
Msa1228280 MtrunA17_Chr8g0336251 26.840 462 282 13 6 440 7 439 2.83e-32 128
Msa1228280 MtrunA17_Chr6g0463891 35.683 227 121 5 244 459 265 477 4.31e-32 128
Msa1228280 MtrunA17_Chr5g0427571 34.400 250 136 6 213 449 46 280 5.70e-32 124
Msa1228280 MtrunA17_Chr6g0466841 26.552 467 291 15 3 451 15 447 6.79e-32 127
Msa1228280 MtrunA17_Chr5g0442501 28.435 313 206 8 3 306 2 305 7.31e-32 124
Msa1228280 MtrunA17_Chr5g0431371 25.261 479 292 17 6 462 10 444 2.61e-31 125
Msa1228280 MtrunA17_Chr1g0196851 26.180 466 276 11 2 440 45 469 3.74e-31 125
Msa1228280 MtrunA17_Chr4g0039881 33.610 241 140 5 207 441 187 413 7.48e-31 124
Msa1228280 MtrunA17_Chr4g0040691 25.282 443 299 13 6 439 8 427 6.42e-30 121
Msa1228280 MtrunA17_Chr2g0302851 24.689 482 267 15 2 442 12 438 7.06e-30 121
Msa1228280 MtrunA17_Chr6g0454371 33.889 180 102 4 283 462 4 166 1.04e-29 114
Msa1228280 MtrunA17_Chr3g0092031 36.264 182 102 3 260 441 6 173 1.39e-29 114
Msa1228280 MtrunA17_Chr5g0448551 24.831 443 287 15 3 426 4 419 7.05e-29 118
Msa1228280 MtrunA17_Chr6g0454251 33.023 215 119 6 178 380 194 395 7.59e-29 117
Msa1228280 MtrunA17_Chr5g0416821 32.734 278 140 8 211 466 221 473 1.00e-28 118
Msa1228280 MtrunA17_Chr4g0066141 37.821 156 86 3 318 462 192 347 4.18e-28 114
Msa1228280 MtrunA17_Chr2g0283041 30.045 223 144 3 210 432 210 420 2.57e-27 114
Msa1228280 MtrunA17_Chr3g0079721 28.966 290 187 7 4 278 3 288 4.50e-27 110
Msa1228280 MtrunA17_Chr8g0357361 39.041 146 76 2 257 402 117 249 9.92e-27 108
Msa1228280 MtrunA17_Chr4g0040711 24.208 442 305 11 6 439 8 427 2.65e-26 111
Msa1228280 MtrunA17_Chr4g0029161 26.000 450 268 14 1 440 7 401 7.12e-26 109
Msa1228280 MtrunA17_Chr5g0431431 29.961 257 146 7 171 422 116 343 4.89e-25 105
Msa1228280 MtrunA17_Chr8g0336261 35.333 150 80 4 280 429 1 133 6.06e-25 99.8
Msa1228280 MtrunA17_Chr7g0231631 31.273 275 142 7 209 462 7 255 7.49e-25 103
Msa1228280 MtrunA17_Chr6g0454231 26.275 255 127 6 209 455 5 206 8.08e-23 100
Msa1228280 MtrunA17_Chr2g0319801 24.612 451 300 13 6 443 8 431 1.31e-21 97.1
Msa1228280 MtrunA17_Chr2g0319761 23.991 446 309 11 6 441 8 433 5.71e-21 95.1
Msa1228280 MtrunA17_Chr5g0442551 26.246 301 183 11 61 349 21 294 8.93e-21 92.4
Msa1228280 MtrunA17_Chr1g0207881 35.099 151 88 4 315 462 237 380 9.84e-21 94.0
Msa1228280 MtrunA17_Chr2g0319791 24.330 448 297 16 6 439 8 427 5.21e-20 92.4
Msa1228280 MtrunA17_Chr2g0319731 23.385 449 308 13 6 443 25 448 2.98e-19 90.1
Msa1228280 MtrunA17_Chr2g0319751 24.719 445 299 14 6 439 485 904 5.02e-19 90.5
Msa1228280 MtrunA17_Chr2g0319751 35.897 117 72 2 324 439 289 403 2.59e-15 79.0
Msa1228280 MtrunA17_Chr7g0243731 47.887 71 37 0 333 403 2 72 2.75e-18 79.3
Msa1228280 MtrunA17_Chr2g0321331 32.402 179 92 4 265 443 91 240 3.18e-18 84.7
Msa1228280 MtrunA17_Chr6g0449971 54.545 77 34 1 389 465 1 76 4.90e-18 79.0
Msa1228280 MtrunA17_Chr6g0469961 34.507 142 78 5 170 300 27 164 1.03e-15 74.7
Msa1228280 MtrunA17_Chr6g0453941 27.950 161 102 6 171 319 113 271 4.34e-15 75.5
Msa1228280 MtrunA17_Chr6g0454391 46.269 67 31 2 356 422 13 74 1.72e-13 67.0
Msa1228280 MtrunA17_Chr6g0453981 31.507 146 86 6 171 304 61 204 2.05e-13 69.7
Msa1228280 MtrunA17_Chr6g0454111 33.333 135 77 4 178 300 50 183 5.16e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1228280 AT1G01420.1 46.795 468 231 13 6 465 8 465 3.97e-133 393
Msa1228280 AT4G01070.1 45.243 473 240 11 2 465 4 466 4.24e-133 393
Msa1228280 AT1G01420.2 46.795 468 231 13 6 465 11 468 6.39e-133 393
Msa1228280 AT1G01390.1 46.709 471 228 14 6 465 8 466 1.78e-124 371
Msa1228280 AT1G01390.2 46.709 471 228 14 6 465 25 483 1.92e-124 372
Msa1228280 AT5G26310.1 36.458 480 277 11 4 469 5 470 8.18e-98 303
Msa1228280 AT3G50740.1 36.534 479 272 11 4 463 5 470 1.02e-93 292
Msa1228280 AT5G66690.1 36.285 463 271 9 4 455 5 454 9.37e-92 287
Msa1228280 AT2G18570.1 36.059 477 270 15 9 467 8 467 2.62e-83 265
Msa1228280 AT4G36770.1 35.590 458 260 13 8 448 6 445 1.92e-81 259
Msa1228280 AT3G16520.3 35.118 467 275 11 7 462 6 455 6.60e-81 258
Msa1228280 AT1G07260.1 34.615 468 263 14 11 455 13 460 2.11e-77 249
Msa1228280 AT3G16520.1 34.649 456 270 11 7 451 6 444 5.31e-77 248
Msa1228280 AT3G16520.2 34.649 456 270 11 7 451 6 444 7.27e-77 247
Msa1228280 AT4G01070.2 41.808 354 186 11 2 346 4 346 1.82e-76 243
Msa1228280 AT1G07250.1 31.557 488 296 12 1 466 1 472 5.23e-75 243
Msa1228280 AT2G18560.1 38.845 381 210 10 95 465 8 375 6.25e-74 238
Msa1228280 AT3G21790.1 32.025 484 293 13 4 462 2 474 1.49e-70 232
Msa1228280 AT2G29750.1 32.558 473 276 17 7 455 9 462 5.81e-69 228
Msa1228280 AT3G21780.1 32.988 482 275 14 4 459 2 461 2.33e-68 226
Msa1228280 AT3G21750.1 31.789 475 290 9 4 459 2 461 4.04e-68 225
Msa1228280 AT4G15280.1 30.705 482 297 13 4 462 2 469 3.18e-67 223
Msa1228280 AT4G15280.2 30.705 482 297 13 4 462 34 501 7.15e-67 223
Msa1228280 AT3G21800.1 31.535 482 293 13 1 459 1 468 1.19e-65 219
Msa1228280 AT2G29730.1 29.079 478 300 14 3 462 2 458 2.40e-65 218
Msa1228280 AT2G29740.1 31.092 476 290 13 2 455 4 463 9.34e-65 216
Msa1228280 AT1G07240.1 30.913 482 291 11 3 458 2 467 2.25e-64 216
Msa1228280 AT2G29710.1 29.684 475 295 14 3 459 2 455 1.46e-62 211
Msa1228280 AT4G15260.1 32.961 358 222 7 115 462 1 350 4.38e-62 206
Msa1228280 AT3G21760.1 31.622 487 287 14 4 459 2 473 5.37e-61 207
Msa1228280 AT4G34131.1 29.317 498 287 11 2 462 6 475 1.90e-57 197
Msa1228280 AT2G15490.1 30.081 492 284 16 1 455 1 469 1.27e-56 195
Msa1228280 AT2G15490.3 30.567 494 276 18 1 455 1 466 3.06e-56 194
Msa1228280 AT2G16890.2 30.691 492 277 16 6 466 9 467 2.55e-55 192
Msa1228280 AT2G36800.1 29.518 498 284 13 6 462 12 483 6.78e-54 188
Msa1228280 AT4G34135.1 30.285 492 291 11 2 462 7 477 1.56e-53 187
Msa1228280 AT2G15480.1 32.376 383 219 10 91 455 109 469 2.96e-53 186
Msa1228280 AT2G36770.1 29.918 488 294 18 6 462 14 484 1.89e-52 184
Msa1228280 AT2G15480.2 32.061 393 217 11 91 455 109 479 2.31e-52 184
Msa1228280 AT1G22340.1 30.495 505 277 22 3 466 10 481 5.64e-52 183
Msa1228280 AT2G36780.1 30.242 496 282 16 6 462 14 484 2.47e-51 181
Msa1228280 AT5G14860.1 30.754 491 279 15 6 462 8 471 3.28e-51 181
Msa1228280 AT3G53160.1 31.365 491 283 17 6 462 8 478 4.29e-51 181
Msa1228280 AT1G05675.1 29.522 481 287 14 1 462 1 448 9.21e-51 179
Msa1228280 AT1G05680.1 28.306 484 285 14 1 460 1 446 3.54e-49 174
Msa1228280 AT2G36760.1 30.020 493 273 15 6 455 14 477 3.93e-49 176
Msa1228280 AT2G36750.1 27.664 488 304 14 6 462 10 479 6.56e-49 175
Msa1228280 AT1G22360.1 29.352 494 276 20 3 456 7 467 1.65e-48 173
Msa1228280 AT4G34138.1 30.144 418 229 11 61 455 90 467 1.69e-48 174
Msa1228280 AT2G23260.1 28.870 478 283 13 2 459 6 446 1.76e-48 173
Msa1228280 AT2G16890.3 30.067 449 251 15 6 424 9 424 2.35e-48 172
Msa1228280 AT2G36790.1 29.600 500 280 15 6 462 13 483 1.54e-47 171
Msa1228280 AT1G22400.1 29.124 491 282 16 2 455 9 470 1.78e-47 171
Msa1228280 AT2G43820.1 28.226 496 277 18 2 468 3 448 2.03e-47 170
Msa1228280 AT1G22380.1 29.792 480 277 17 3 449 10 462 2.78e-47 170
Msa1228280 AT3G53150.1 29.492 512 270 16 3 455 19 498 3.48e-47 171
Msa1228280 AT2G43840.2 26.585 489 288 14 4 467 5 447 7.58e-47 168
Msa1228280 AT5G03490.1 28.747 487 278 16 2 462 15 458 1.81e-46 167
Msa1228280 AT2G31790.1 34.444 270 142 6 209 462 202 452 2.50e-46 167
Msa1228280 AT3G46680.1 29.019 479 286 16 1 462 4 445 2.94e-46 167
Msa1228280 AT2G30140.2 29.752 484 283 15 2 468 9 452 6.44e-46 166
Msa1228280 AT2G43840.1 26.585 489 288 14 4 467 5 447 7.03e-46 166
Msa1228280 AT3G46650.1 28.085 470 278 16 1 459 5 425 1.12e-45 165
Msa1228280 AT2G31750.1 34.432 273 145 7 209 466 201 454 1.46e-45 165
Msa1228280 AT1G24100.1 28.719 484 278 14 4 460 9 452 2.84e-45 164
Msa1228280 AT3G55700.1 28.482 481 300 14 2 469 4 453 3.71e-45 164
Msa1228280 AT2G30140.1 30.041 486 280 17 2 468 9 453 4.18e-45 164
Msa1228280 AT2G31750.2 34.432 273 145 7 209 466 201 454 4.31e-45 164
Msa1228280 AT2G23250.1 28.540 459 279 14 17 462 9 431 5.09e-45 163
Msa1228280 AT1G10400.1 37.634 279 147 7 192 462 199 458 8.89e-45 163
Msa1228280 AT3G55710.1 29.448 489 289 15 2 469 4 457 1.58e-44 162
Msa1228280 AT3G46700.1 28.390 472 297 12 3 466 6 444 1.74e-44 162
Msa1228280 AT5G59580.1 27.664 488 289 17 4 469 7 452 7.56e-44 160
Msa1228280 AT1G22370.2 29.774 487 276 17 3 455 10 464 2.14e-43 159
Msa1228280 AT5G17050.1 30.556 360 225 7 106 462 115 452 4.20e-43 158
Msa1228280 AT3G46690.1 28.025 471 297 13 3 462 6 445 5.99e-43 158
Msa1228280 AT1G22360.2 28.723 470 265 19 3 430 7 448 9.72e-43 157
Msa1228280 AT2G36970.1 26.210 496 308 16 2 468 6 472 9.80e-43 158
Msa1228280 AT5G59590.1 27.253 466 300 14 3 459 7 442 1.49e-42 157
Msa1228280 AT1G78270.1 27.218 496 273 18 2 450 9 463 5.48e-42 156
Msa1228280 AT5G05880.1 32.660 297 179 7 177 469 172 451 8.09e-42 154
Msa1228280 AT5G38010.1 27.368 475 300 13 2 462 6 449 3.20e-41 153
Msa1228280 AT5G12890.1 28.631 482 263 17 7 443 11 456 1.01e-40 152
Msa1228280 AT1G30530.1 31.356 354 211 10 106 455 114 439 2.78e-40 150
Msa1228280 AT1G05560.1 31.302 361 216 12 111 462 110 447 7.64e-40 149
Msa1228280 AT3G46660.1 27.273 473 291 16 4 459 12 448 1.19e-39 149
Msa1228280 AT4G15550.1 32.320 362 217 13 111 462 126 469 1.27e-39 149
Msa1228280 AT1G22370.1 35.395 291 155 10 180 455 22 294 1.44e-39 145
Msa1228280 AT1G05530.1 27.426 474 307 15 6 466 5 454 1.75e-39 148
Msa1228280 AT1G05560.2 31.302 361 216 12 111 462 160 497 2.45e-39 149
Msa1228280 AT3G46670.1 28.025 471 282 17 7 459 10 441 3.03e-39 147
Msa1228280 AT5G38040.1 27.074 458 283 15 17 459 21 442 3.96e-39 147
Msa1228280 AT2G30150.2 28.085 470 291 15 6 462 13 448 1.09e-38 146
Msa1228280 AT5G17030.1 28.710 411 259 11 64 469 77 458 3.02e-38 145
Msa1228280 AT2G30150.1 28.326 466 287 15 10 462 1 432 3.28e-38 144
Msa1228280 AT1G51210.1 27.815 453 276 15 4 442 18 433 4.02e-38 144
Msa1228280 AT1G73880.1 29.106 481 289 20 4 462 12 462 1.05e-37 144
Msa1228280 AT3G11340.1 29.972 357 219 9 120 469 115 447 1.51e-37 143
Msa1228280 AT5G49690.1 25.893 448 297 10 6 443 10 432 1.54e-37 143
Msa1228280 AT5G05860.1 33.984 256 151 5 211 463 204 444 1.79e-37 142
Msa1228280 AT5G05890.1 32.997 297 178 8 177 469 176 455 4.81e-37 142
Msa1228280 AT5G05870.1 29.859 355 219 9 120 466 122 454 1.11e-36 140
Msa1228280 AT2G26480.1 34.014 294 166 9 177 462 168 441 2.23e-36 140
Msa1228280 AT3G21560.1 27.603 413 259 12 73 466 81 472 3.86e-36 140
Msa1228280 AT3G02100.1 26.840 462 279 15 4 441 11 437 8.43e-36 138
Msa1228280 AT4G15490.1 25.255 491 313 15 2 466 4 466 3.11e-35 137
Msa1228280 AT2G28080.1 30.919 359 221 13 95 445 113 452 4.07e-35 137
Msa1228280 AT5G05900.1 31.271 291 171 8 177 462 177 443 5.99e-35 135
Msa1228280 AT5G17040.1 28.261 414 243 13 58 455 53 428 9.94e-35 135
Msa1228280 AT4G15480.1 28.329 353 228 7 123 466 142 478 1.09e-34 135
Msa1228280 AT3G46720.1 34.926 272 144 7 199 462 190 436 5.43e-34 133
Msa1228280 AT5G65550.1 25.277 451 284 14 4 431 7 427 2.10e-33 132
Msa1228280 AT4G14090.1 33.200 250 141 9 213 455 214 444 2.36e-33 131
Msa1228280 AT4G15500.1 25.630 476 317 13 6 466 9 462 2.50e-33 131
Msa1228280 AT1G06000.1 34.211 266 156 7 211 466 177 433 7.94e-33 129
Msa1228280 AT3G29630.1 26.770 452 281 14 1 440 1 414 5.11e-32 127
Msa1228280 AT5G17040.2 30.537 298 178 8 173 462 57 333 5.19e-32 125
Msa1228280 AT4G27570.1 26.591 440 279 12 4 432 5 411 1.51e-31 126
Msa1228280 AT1G50580.1 26.195 481 305 14 1 468 1 444 4.10e-31 125
Msa1228280 AT5G54010.1 26.637 443 282 12 1 432 1 411 5.21e-31 125
Msa1228280 AT4G27560.1 26.577 444 274 14 4 432 5 411 5.14e-30 122
Msa1228280 AT1G64910.1 25.828 453 281 15 1 440 1 411 1.56e-29 120
Msa1228280 AT2G22590.1 24.169 451 313 11 4 442 13 446 3.32e-29 120
Msa1228280 AT5G53990.1 26.503 449 269 16 1 432 1 405 8.46e-29 118
Msa1228280 AT3G29630.2 26.846 447 261 15 1 440 1 388 6.45e-28 115
Msa1228280 AT5G54060.1 25.870 460 308 13 7 455 14 451 4.86e-27 113
Msa1228280 AT5G37950.2 27.246 345 210 11 52 380 19 338 1.11e-26 110
Msa1228280 AT3G22250.1 34.197 193 98 8 257 445 273 440 3.76e-26 110
Msa1228280 AT5G37950.1 27.326 344 217 11 52 380 19 344 8.04e-26 108
Msa1228280 AT2G22930.1 23.140 484 293 14 1 464 1 425 1.94e-25 108
Msa1228280 AT1G64920.1 25.708 459 274 19 1 437 1 414 1.80e-24 105
Msa1228280 AT4G09500.2 25.333 450 273 16 1 432 1 405 3.22e-23 102
Msa1228280 AT4G09500.1 25.508 443 256 16 1 432 1 380 1.58e-22 99.8
Msa1228280 AT4G34135.2 26.667 330 205 10 2 304 7 326 9.54e-20 90.5

Find 86 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTAATTCAATGTGTTTA+AGG 0.145467 8_2:+3753299 Msa1228280:CDS
CTTTCACAAAGAATTATTTC+TGG 0.191482 8_2:-3753094 None:intergenic
TTGGAAAGAAACAGAGAAAA+TGG 0.199325 8_2:+3753535 Msa1228280:CDS
ATTAGACTCATTTCTAATAA+TGG 0.226365 8_2:-3753266 None:intergenic
ATTCAACTTGTGGAATTAAA+TGG 0.235675 8_2:-3752592 None:intergenic
TAAAGAAACAAGGTTAGTTT+TGG 0.255731 8_2:-3752855 None:intergenic
ATTTGGAGCCAGATATTATA+AGG 0.256438 8_2:+3753200 Msa1228280:CDS
AATCAGCACTTTCACTGATT+TGG 0.256891 8_2:+3753183 Msa1228280:CDS
TCTGTTCTTTATGTATGTTT+TGG 0.258567 8_2:+3753346 Msa1228280:CDS
ATGAGTTTCATTTGTGTTGC+AGG 0.282778 8_2:-3752782 None:intergenic
TGAAGAACCCTTATAATATC+TGG 0.294429 8_2:-3753208 None:intergenic
GGAATATCTTTGATATGAAA+TGG 0.301284 8_2:-3753073 None:intergenic
CAACTCAATGAGTTAGCATT+TGG 0.306842 8_2:+3753394 Msa1228280:CDS
CAATGAATTCATTGTGTTGT+TGG 0.323001 8_2:-3752631 None:intergenic
TTTACTTCTTCTTGTAGAAA+TGG 0.328693 8_2:-3752821 None:intergenic
GTATTTACCAAATGGTTTCT+TGG 0.330315 8_2:+3753516 Msa1228280:CDS
TTAGACTCATTTCTAATAAT+GGG 0.340721 8_2:-3753265 None:intergenic
TATGAAACTGTGAATATTCC+AGG 0.341809 8_2:+3753040 Msa1228280:CDS
ACTTTGGAGAGTGTGGTTAA+TGG 0.345363 8_2:+3753646 Msa1228280:CDS
CTTGGTCATGGTTCAATTGG+TGG 0.364820 8_2:+3753595 Msa1228280:CDS
TTCAAGACTTGTTGCATTGA+AGG 0.367448 8_2:-3752689 None:intergenic
AACCTTGTTTCTTTAATCTT+CGG 0.368883 8_2:+3752863 Msa1228280:CDS
TTCAATGTGTTTAAGGTGGT+TGG 0.369384 8_2:+3753306 Msa1228280:CDS
GCACCACAAGTTGAGATTCT+TGG 0.370993 8_2:+3753577 Msa1228280:CDS
TTTCTTTCCAAGAAACCATT+TGG 0.377931 8_2:-3753523 None:intergenic
GAAACAGAGTCGTCGAGATT+CGG 0.378552 8_2:-3752989 None:intergenic
CCACTTTCATCATCAACCTT+TGG 0.392355 8_2:-3753754 None:intergenic
AATCTTTGTTCTGCAAATAG+AGG 0.409100 8_2:-3753688 None:intergenic
ATTCTTGGTCATGGTTCAAT+TGG 0.416708 8_2:+3753592 Msa1228280:CDS
AATAGAGGCCATGCAATCAT+AGG 0.417514 8_2:-3753673 None:intergenic
GCAGAGTTAACAGCTTTACT+TGG 0.420196 8_2:-3753460 None:intergenic
AGAAGAATGAATTCTATGTT+TGG 0.423723 8_2:-3752722 None:intergenic
ATTGCTATGGTTCCTTCCCC+TGG 0.428614 8_2:+3752563 Msa1228280:CDS
AGAAGATAAGTTGAATTGTA+TGG 0.446826 8_2:-3752915 None:intergenic
CCGTTAGAGTATTTACCAAA+TGG 0.450358 8_2:+3753508 Msa1228280:CDS
CCAAAGGTTGATGATGAAAG+TGG 0.450373 8_2:+3753754 Msa1228280:CDS
ATGGATTGGTTGTTCCATCA+TGG 0.450594 8_2:+3753554 Msa1228280:CDS
TTGTGGTTGGGGTTCAACTT+TGG 0.450652 8_2:+3753630 Msa1228280:CDS
GTGTTGTTGGAGTAATTGTT+TGG 0.475857 8_2:-3752618 None:intergenic
TTTGGAGCCAGATATTATAA+GGG 0.493888 8_2:+3753201 Msa1228280:CDS
TGGATTGGTTGTTCCATCAT+GGG 0.505053 8_2:+3753555 Msa1228280:CDS
GAATATCTTTGATATGAAAT+GGG 0.509722 8_2:-3753072 None:intergenic
GGGTTCAACTTTGGAGAGTG+TGG 0.511321 8_2:+3753639 Msa1228280:CDS
CAAGTTGAGATTCTTGGTCA+TGG 0.513039 8_2:+3753583 Msa1228280:CDS
CATGGAAGGTGATGAAAGCT+TGG 0.514512 8_2:+3753819 Msa1228280:CDS
CATACATAAAGAACAGAACT+TGG 0.526486 8_2:-3753340 None:intergenic
GGAATTAAATGGCTAAGTCC+AGG 0.532715 8_2:-3752581 None:intergenic
TGTTTGGCAAATTCAACTTG+TGG 0.534373 8_2:-3752602 None:intergenic
CAAGTGAACATGGTTCATCT+AGG 0.540322 8_2:+3753890 Msa1228280:CDS
AGAATGAATTCTATGTTTGG+TGG 0.540562 8_2:-3752719 None:intergenic
GCAGGTTCAAGATTAATCTC+TGG 0.542912 8_2:-3752764 None:intergenic
TCAACTTGTGGTGCCCATGA+TGG 0.543506 8_2:-3753568 None:intergenic
GAATTAAATGGCTAAGTCCA+GGG 0.544089 8_2:-3752580 None:intergenic
TGAAATGGGATGACACAACC+TGG 0.545651 8_2:-3753058 None:intergenic
ACATTCCTCATTCCAACACT+TGG 0.548904 8_2:+3752656 Msa1228280:CDS
TTTCTAATAATGGGTCCCAC+TGG 0.554519 8_2:-3753256 None:intergenic
AAGAAACAGAGAAAATGGAT+TGG 0.554526 8_2:+3753540 Msa1228280:CDS
ATGGTGTTCCTATGATTGCA+TGG 0.560119 8_2:+3753665 Msa1228280:CDS
TTAATTCAATGTGTTTAAGG+TGG 0.567516 8_2:+3753302 Msa1228280:CDS
AAGTGGGATAGTGAAAAGAG+AGG 0.570992 8_2:+3753771 Msa1228280:CDS
GGAGTGAGAGGACCAAGTGT+TGG 0.574957 8_2:-3752668 None:intergenic
GAGGACCAAGTGTTGGAATG+AGG 0.575225 8_2:-3752661 None:intergenic
GAGCACCTGAGGCATAGAAA+AGG 0.577258 8_2:-3752940 None:intergenic
GCATTTGGATTAGAATTGAG+TGG 0.582499 8_2:+3753409 Msa1228280:CDS
CCATTTGGTAAATACTCTAA+CGG 0.585513 8_2:-3753508 None:intergenic
AAACCTTGTGTTTATCCAGT+GGG 0.588499 8_2:+3753241 Msa1228280:CDS
TGAACATGGTTCATCTAGGA+AGG 0.588808 8_2:+3753894 Msa1228280:CDS
AGAATCAAAGAATTGAGTGA+TGG 0.599141 8_2:+3753853 Msa1228280:CDS
ACATAAAGAACAGAACTTGG+TGG 0.614992 8_2:-3753337 None:intergenic
GAAACCTTGTGTTTATCCAG+TGG 0.617602 8_2:+3753240 Msa1228280:CDS
TGTTGCATTGAAGGAGTGAG+AGG 0.618094 8_2:-3752680 None:intergenic
TGAGAATGAAAGAGCACCTG+AGG 0.624676 8_2:-3752951 None:intergenic
TATGGCAACTTCATGTGCAT+CGG 0.626877 8_2:-3752897 None:intergenic
TAAATGTGTAAAGAGAATCA+TGG 0.637525 8_2:+3753801 Msa1228280:CDS
CAAAGGTTGATGATGAAAGT+GGG 0.642278 8_2:+3753755 Msa1228280:CDS
GTTCAAGATTAATCTCTGGA+AGG 0.643047 8_2:-3752760 None:intergenic
GACCGAAGATTAAAGAAACA+AGG 0.654587 8_2:-3752865 None:intergenic
AAATGGCTAAGTCCAGGGGA+AGG 0.656957 8_2:-3752575 None:intergenic
TGTGTAAAGAGAATCATGGA+AGG 0.659730 8_2:+3753805 Msa1228280:CDS
CAAAGTGGCTGTGAGGCCAA+AGG 0.659851 8_2:+3753738 Msa1228280:CDS
TGACCAAGAATCTCAACTTG+TGG 0.660415 8_2:-3753580 None:intergenic
GCTGTTGCAACAAGTGAACA+TGG 0.680378 8_2:+3753880 Msa1228280:CDS
GGTCCCACTGGATAAACACA+AGG 0.696810 8_2:-3753244 None:intergenic
ATTGACAGATGTGCTCAAAG+TGG 0.698009 8_2:+3753723 Msa1228280:CDS
AATTAAATGGCTAAGTCCAG+GGG 0.708782 8_2:-3752579 None:intergenic
ATGTGCTCAAAGTGGCTGTG+AGG 0.734532 8_2:+3753731 Msa1228280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAACATACATTGCTA+TGG + chr8_2:3752550-3752569 Msa1228280:CDS 20.0%
!! GAATATCTTTGATATGAAAT+GGG - chr8_2:3753075-3753094 None:intergenic 20.0%
!! TTAGACTCATTTCTAATAAT+GGG - chr8_2:3753268-3753287 None:intergenic 20.0%
!! ATTAGACTCATTTCTAATAA+TGG - chr8_2:3753269-3753288 None:intergenic 20.0%
!! ACATTAATTCAATGTGTTTA+AGG + chr8_2:3753299-3753318 Msa1228280:CDS 20.0%
!! TAAAAAAACATACATTGCTA+TGG + chr8_2:3752550-3752569 Msa1228280:CDS 20.0%
!! GAATATCTTTGATATGAAAT+GGG - chr8_2:3753075-3753094 None:intergenic 20.0%
!! TTAGACTCATTTCTAATAAT+GGG - chr8_2:3753268-3753287 None:intergenic 20.0%
!! ATTAGACTCATTTCTAATAA+TGG - chr8_2:3753269-3753288 None:intergenic 20.0%
!! ACATTAATTCAATGTGTTTA+AGG + chr8_2:3753299-3753318 Msa1228280:CDS 20.0%
! ATTCAACTTGTGGAATTAAA+TGG - chr8_2:3752595-3752614 None:intergenic 25.0%
! AGAAGAATGAATTCTATGTT+TGG - chr8_2:3752725-3752744 None:intergenic 25.0%
! TTTACTTCTTCTTGTAGAAA+TGG - chr8_2:3752824-3752843 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG - chr8_2:3752858-3752877 None:intergenic 25.0%
!! AACCTTGTTTCTTTAATCTT+CGG + chr8_2:3752863-3752882 Msa1228280:CDS 25.0%
!! AGAAGATAAGTTGAATTGTA+TGG - chr8_2:3752918-3752937 None:intergenic 25.0%
!!! TGAAGTAGAGTTTTTAGAAT+CGG + chr8_2:3753015-3753034 Msa1228280:CDS 25.0%
! GGAATATCTTTGATATGAAA+TGG - chr8_2:3753076-3753095 None:intergenic 25.0%
! CTTTCACAAAGAATTATTTC+TGG - chr8_2:3753097-3753116 None:intergenic 25.0%
! TTAATTCAATGTGTTTAAGG+TGG + chr8_2:3753302-3753321 Msa1228280:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG + chr8_2:3753346-3753365 Msa1228280:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG + chr8_2:3753347-3753366 Msa1228280:CDS 25.0%
! TAAATGTGTAAAGAGAATCA+TGG + chr8_2:3753801-3753820 Msa1228280:CDS 25.0%
! ATTCAACTTGTGGAATTAAA+TGG - chr8_2:3752595-3752614 None:intergenic 25.0%
! AGAAGAATGAATTCTATGTT+TGG - chr8_2:3752725-3752744 None:intergenic 25.0%
! TTTACTTCTTCTTGTAGAAA+TGG - chr8_2:3752824-3752843 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG - chr8_2:3752858-3752877 None:intergenic 25.0%
!! AACCTTGTTTCTTTAATCTT+CGG + chr8_2:3752863-3752882 Msa1228280:CDS 25.0%
!! AGAAGATAAGTTGAATTGTA+TGG - chr8_2:3752918-3752937 None:intergenic 25.0%
!!! TGAAGTAGAGTTTTTAGAAT+CGG + chr8_2:3753015-3753034 Msa1228280:CDS 25.0%
! GGAATATCTTTGATATGAAA+TGG - chr8_2:3753076-3753095 None:intergenic 25.0%
! CTTTCACAAAGAATTATTTC+TGG - chr8_2:3753097-3753116 None:intergenic 25.0%
! TTAATTCAATGTGTTTAAGG+TGG + chr8_2:3753302-3753321 Msa1228280:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG + chr8_2:3753346-3753365 Msa1228280:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG + chr8_2:3753347-3753366 Msa1228280:CDS 25.0%
! TAAATGTGTAAAGAGAATCA+TGG + chr8_2:3753801-3753820 Msa1228280:CDS 25.0%
CAATGAATTCATTGTGTTGT+TGG - chr8_2:3752634-3752653 None:intergenic 30.0%
AGAATGAATTCTATGTTTGG+TGG - chr8_2:3752722-3752741 None:intergenic 30.0%
! TTCTAAAAACTCTACTTCAG+AGG - chr8_2:3753014-3753033 None:intergenic 30.0%
TATGAAACTGTGAATATTCC+AGG + chr8_2:3753040-3753059 Msa1228280:CDS 30.0%
CAAAAACTCTCATTAGTTGA+TGG + chr8_2:3753154-3753173 Msa1228280:CDS 30.0%
! ATTTGGAGCCAGATATTATA+AGG + chr8_2:3753200-3753219 Msa1228280:CDS 30.0%
! TTTGGAGCCAGATATTATAA+GGG + chr8_2:3753201-3753220 Msa1228280:CDS 30.0%
TGAAGAACCCTTATAATATC+TGG - chr8_2:3753211-3753230 None:intergenic 30.0%
CATACATAAAGAACAGAACT+TGG - chr8_2:3753343-3753362 None:intergenic 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG + chr8_2:3753472-3753491 Msa1228280:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG - chr8_2:3753511-3753530 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG + chr8_2:3753516-3753535 Msa1228280:CDS 30.0%
TTTCTTTCCAAGAAACCATT+TGG - chr8_2:3753526-3753545 None:intergenic 30.0%
TTGGAAAGAAACAGAGAAAA+TGG + chr8_2:3753535-3753554 Msa1228280:CDS 30.0%
AAGAAACAGAGAAAATGGAT+TGG + chr8_2:3753540-3753559 Msa1228280:CDS 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG + chr8_2:3753618-3753637 Msa1228280:CDS 30.0%
AATCTTTGTTCTGCAAATAG+AGG - chr8_2:3753691-3753710 None:intergenic 30.0%
AGAATCAAAGAATTGAGTGA+TGG + chr8_2:3753853-3753872 Msa1228280:CDS 30.0%
CAATGAATTCATTGTGTTGT+TGG - chr8_2:3752634-3752653 None:intergenic 30.0%
AGAATGAATTCTATGTTTGG+TGG - chr8_2:3752722-3752741 None:intergenic 30.0%
! TTCTAAAAACTCTACTTCAG+AGG - chr8_2:3753014-3753033 None:intergenic 30.0%
TATGAAACTGTGAATATTCC+AGG + chr8_2:3753040-3753059 Msa1228280:CDS 30.0%
CAAAAACTCTCATTAGTTGA+TGG + chr8_2:3753154-3753173 Msa1228280:CDS 30.0%
! ATTTGGAGCCAGATATTATA+AGG + chr8_2:3753200-3753219 Msa1228280:CDS 30.0%
! TTTGGAGCCAGATATTATAA+GGG + chr8_2:3753201-3753220 Msa1228280:CDS 30.0%
TGAAGAACCCTTATAATATC+TGG - chr8_2:3753211-3753230 None:intergenic 30.0%
CATACATAAAGAACAGAACT+TGG - chr8_2:3753343-3753362 None:intergenic 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG + chr8_2:3753472-3753491 Msa1228280:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG - chr8_2:3753511-3753530 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG + chr8_2:3753516-3753535 Msa1228280:CDS 30.0%
TTTCTTTCCAAGAAACCATT+TGG - chr8_2:3753526-3753545 None:intergenic 30.0%
TTGGAAAGAAACAGAGAAAA+TGG + chr8_2:3753535-3753554 Msa1228280:CDS 30.0%
AAGAAACAGAGAAAATGGAT+TGG + chr8_2:3753540-3753559 Msa1228280:CDS 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG + chr8_2:3753618-3753637 Msa1228280:CDS 30.0%
AATCTTTGTTCTGCAAATAG+AGG - chr8_2:3753691-3753710 None:intergenic 30.0%
AGAATCAAAGAATTGAGTGA+TGG + chr8_2:3753853-3753872 Msa1228280:CDS 30.0%
AATTAAATGGCTAAGTCCAG+GGG - chr8_2:3752582-3752601 None:intergenic 35.0%
GAATTAAATGGCTAAGTCCA+GGG - chr8_2:3752583-3752602 None:intergenic 35.0%
TGTTTGGCAAATTCAACTTG+TGG - chr8_2:3752605-3752624 None:intergenic 35.0%
! GTGTTGTTGGAGTAATTGTT+TGG - chr8_2:3752621-3752640 None:intergenic 35.0%
!! TTCAAGACTTGTTGCATTGA+AGG - chr8_2:3752692-3752711 None:intergenic 35.0%
GTTCAAGATTAATCTCTGGA+AGG - chr8_2:3752763-3752782 None:intergenic 35.0%
ATGAGTTTCATTTGTGTTGC+AGG - chr8_2:3752785-3752804 None:intergenic 35.0%
GACCGAAGATTAAAGAAACA+AGG - chr8_2:3752868-3752887 None:intergenic 35.0%
! AATCAGCACTTTCACTGATT+TGG + chr8_2:3753183-3753202 Msa1228280:CDS 35.0%
AAACCTTGTGTTTATCCAGT+GGG + chr8_2:3753241-3753260 Msa1228280:CDS 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG + chr8_2:3753306-3753325 Msa1228280:CDS 35.0%
ACATAAAGAACAGAACTTGG+TGG - chr8_2:3753340-3753359 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG + chr8_2:3753352-3753371 Msa1228280:CDS 35.0%
CAACTCAATGAGTTAGCATT+TGG + chr8_2:3753394-3753413 Msa1228280:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG + chr8_2:3753409-3753428 Msa1228280:CDS 35.0%
TGAGTGGTAAAAAGTTCTTG+TGG + chr8_2:3753425-3753444 Msa1228280:CDS 35.0%
GAGTGGTAAAAAGTTCTTGT+GGG + chr8_2:3753426-3753445 Msa1228280:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG + chr8_2:3753508-3753527 Msa1228280:CDS 35.0%
ATTCTTGGTCATGGTTCAAT+TGG + chr8_2:3753592-3753611 Msa1228280:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG + chr8_2:3753617-3753636 Msa1228280:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG + chr8_2:3753619-3753638 Msa1228280:CDS 35.0%
!! CAAAGGTTGATGATGAAAGT+GGG + chr8_2:3753755-3753774 Msa1228280:CDS 35.0%
TGTGTAAAGAGAATCATGGA+AGG + chr8_2:3753805-3753824 Msa1228280:CDS 35.0%
AATTAAATGGCTAAGTCCAG+GGG - chr8_2:3752582-3752601 None:intergenic 35.0%
GAATTAAATGGCTAAGTCCA+GGG - chr8_2:3752583-3752602 None:intergenic 35.0%
TGTTTGGCAAATTCAACTTG+TGG - chr8_2:3752605-3752624 None:intergenic 35.0%
! GTGTTGTTGGAGTAATTGTT+TGG - chr8_2:3752621-3752640 None:intergenic 35.0%
!! TTCAAGACTTGTTGCATTGA+AGG - chr8_2:3752692-3752711 None:intergenic 35.0%
GTTCAAGATTAATCTCTGGA+AGG - chr8_2:3752763-3752782 None:intergenic 35.0%
ATGAGTTTCATTTGTGTTGC+AGG - chr8_2:3752785-3752804 None:intergenic 35.0%
GACCGAAGATTAAAGAAACA+AGG - chr8_2:3752868-3752887 None:intergenic 35.0%
! AATCAGCACTTTCACTGATT+TGG + chr8_2:3753183-3753202 Msa1228280:CDS 35.0%
AAACCTTGTGTTTATCCAGT+GGG + chr8_2:3753241-3753260 Msa1228280:CDS 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG + chr8_2:3753306-3753325 Msa1228280:CDS 35.0%
ACATAAAGAACAGAACTTGG+TGG - chr8_2:3753340-3753359 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG + chr8_2:3753352-3753371 Msa1228280:CDS 35.0%
CAACTCAATGAGTTAGCATT+TGG + chr8_2:3753394-3753413 Msa1228280:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG + chr8_2:3753409-3753428 Msa1228280:CDS 35.0%
TGAGTGGTAAAAAGTTCTTG+TGG + chr8_2:3753425-3753444 Msa1228280:CDS 35.0%
GAGTGGTAAAAAGTTCTTGT+GGG + chr8_2:3753426-3753445 Msa1228280:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG + chr8_2:3753508-3753527 Msa1228280:CDS 35.0%
ATTCTTGGTCATGGTTCAAT+TGG + chr8_2:3753592-3753611 Msa1228280:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG + chr8_2:3753617-3753636 Msa1228280:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG + chr8_2:3753619-3753638 Msa1228280:CDS 35.0%
!! CAAAGGTTGATGATGAAAGT+GGG + chr8_2:3753755-3753774 Msa1228280:CDS 35.0%
TGTGTAAAGAGAATCATGGA+AGG + chr8_2:3753805-3753824 Msa1228280:CDS 35.0%
GGAATTAAATGGCTAAGTCC+AGG - chr8_2:3752584-3752603 None:intergenic 40.0%
ACATTCCTCATTCCAACACT+TGG + chr8_2:3752656-3752675 Msa1228280:CDS 40.0%
!!! TCTGGAAGGTGTTTTACTTG+AGG - chr8_2:3752749-3752768 None:intergenic 40.0%
GCAGGTTCAAGATTAATCTC+TGG - chr8_2:3752767-3752786 None:intergenic 40.0%
TATGGCAACTTCATGTGCAT+CGG - chr8_2:3752900-3752919 None:intergenic 40.0%
! TCTTACCTTTTCTATGCCTC+AGG + chr8_2:3752935-3752954 Msa1228280:CDS 40.0%
GAAACCTTGTGTTTATCCAG+TGG + chr8_2:3753240-3753259 Msa1228280:CDS 40.0%
!! TTTCTAATAATGGGTCCCAC+TGG - chr8_2:3753259-3753278 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG + chr8_2:3753355-3753374 Msa1228280:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG - chr8_2:3753463-3753482 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG + chr8_2:3753554-3753573 Msa1228280:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG + chr8_2:3753555-3753574 Msa1228280:CDS 40.0%
TGACCAAGAATCTCAACTTG+TGG - chr8_2:3753583-3753602 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG + chr8_2:3753583-3753602 Msa1228280:CDS 40.0%
!!! GGTGGTTTTTTGAGTCATTG+TGG + chr8_2:3753613-3753632 Msa1228280:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG + chr8_2:3753646-3753665 Msa1228280:CDS 40.0%
ATGGTGTTCCTATGATTGCA+TGG + chr8_2:3753665-3753684 Msa1228280:CDS 40.0%
AATAGAGGCCATGCAATCAT+AGG - chr8_2:3753676-3753695 None:intergenic 40.0%
ATTGACAGATGTGCTCAAAG+TGG + chr8_2:3753723-3753742 Msa1228280:CDS 40.0%
CCACTTTCATCATCAACCTT+TGG - chr8_2:3753757-3753776 None:intergenic 40.0%
!! CCAAAGGTTGATGATGAAAG+TGG + chr8_2:3753754-3753773 Msa1228280:CDS 40.0%
AAGTGGGATAGTGAAAAGAG+AGG + chr8_2:3753771-3753790 Msa1228280:CDS 40.0%
CAAGTGAACATGGTTCATCT+AGG + chr8_2:3753890-3753909 Msa1228280:CDS 40.0%
TGAACATGGTTCATCTAGGA+AGG + chr8_2:3753894-3753913 Msa1228280:CDS 40.0%
GGAATTAAATGGCTAAGTCC+AGG - chr8_2:3752584-3752603 None:intergenic 40.0%
ACATTCCTCATTCCAACACT+TGG + chr8_2:3752656-3752675 Msa1228280:CDS 40.0%
!!! TCTGGAAGGTGTTTTACTTG+AGG - chr8_2:3752749-3752768 None:intergenic 40.0%
GCAGGTTCAAGATTAATCTC+TGG - chr8_2:3752767-3752786 None:intergenic 40.0%
TATGGCAACTTCATGTGCAT+CGG - chr8_2:3752900-3752919 None:intergenic 40.0%
! TCTTACCTTTTCTATGCCTC+AGG + chr8_2:3752935-3752954 Msa1228280:CDS 40.0%
GAAACCTTGTGTTTATCCAG+TGG + chr8_2:3753240-3753259 Msa1228280:CDS 40.0%
!! TTTCTAATAATGGGTCCCAC+TGG - chr8_2:3753259-3753278 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG + chr8_2:3753355-3753374 Msa1228280:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG - chr8_2:3753463-3753482 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG + chr8_2:3753554-3753573 Msa1228280:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG + chr8_2:3753555-3753574 Msa1228280:CDS 40.0%
TGACCAAGAATCTCAACTTG+TGG - chr8_2:3753583-3753602 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG + chr8_2:3753583-3753602 Msa1228280:CDS 40.0%
!!! GGTGGTTTTTTGAGTCATTG+TGG + chr8_2:3753613-3753632 Msa1228280:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG + chr8_2:3753646-3753665 Msa1228280:CDS 40.0%
ATGGTGTTCCTATGATTGCA+TGG + chr8_2:3753665-3753684 Msa1228280:CDS 40.0%
AATAGAGGCCATGCAATCAT+AGG - chr8_2:3753676-3753695 None:intergenic 40.0%
ATTGACAGATGTGCTCAAAG+TGG + chr8_2:3753723-3753742 Msa1228280:CDS 40.0%
CCACTTTCATCATCAACCTT+TGG - chr8_2:3753757-3753776 None:intergenic 40.0%
!! CCAAAGGTTGATGATGAAAG+TGG + chr8_2:3753754-3753773 Msa1228280:CDS 40.0%
AAGTGGGATAGTGAAAAGAG+AGG + chr8_2:3753771-3753790 Msa1228280:CDS 40.0%
CAAGTGAACATGGTTCATCT+AGG + chr8_2:3753890-3753909 Msa1228280:CDS 40.0%
TGAACATGGTTCATCTAGGA+AGG + chr8_2:3753894-3753913 Msa1228280:CDS 40.0%
TGTTGCATTGAAGGAGTGAG+AGG - chr8_2:3752683-3752702 None:intergenic 45.0%
!! TGAGAATGAAAGAGCACCTG+AGG - chr8_2:3752954-3752973 None:intergenic 45.0%
GAAACAGAGTCGTCGAGATT+CGG - chr8_2:3752992-3753011 None:intergenic 45.0%
TGAAATGGGATGACACAACC+TGG - chr8_2:3753061-3753080 None:intergenic 45.0%
! GCACCACAAGTTGAGATTCT+TGG + chr8_2:3753577-3753596 Msa1228280:CDS 45.0%
CTTGGTCATGGTTCAATTGG+TGG + chr8_2:3753595-3753614 Msa1228280:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG + chr8_2:3753630-3753649 Msa1228280:CDS 45.0%
CATGGAAGGTGATGAAAGCT+TGG + chr8_2:3753819-3753838 Msa1228280:CDS 45.0%
GCTGTTGCAACAAGTGAACA+TGG + chr8_2:3753880-3753899 Msa1228280:CDS 45.0%
TGTTGCATTGAAGGAGTGAG+AGG - chr8_2:3752683-3752702 None:intergenic 45.0%
!! TGAGAATGAAAGAGCACCTG+AGG - chr8_2:3752954-3752973 None:intergenic 45.0%
GAAACAGAGTCGTCGAGATT+CGG - chr8_2:3752992-3753011 None:intergenic 45.0%
TGAAATGGGATGACACAACC+TGG - chr8_2:3753061-3753080 None:intergenic 45.0%
! GCACCACAAGTTGAGATTCT+TGG + chr8_2:3753577-3753596 Msa1228280:CDS 45.0%
CTTGGTCATGGTTCAATTGG+TGG + chr8_2:3753595-3753614 Msa1228280:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG + chr8_2:3753630-3753649 Msa1228280:CDS 45.0%
CATGGAAGGTGATGAAAGCT+TGG + chr8_2:3753819-3753838 Msa1228280:CDS 45.0%
GCTGTTGCAACAAGTGAACA+TGG + chr8_2:3753880-3753899 Msa1228280:CDS 45.0%
ATTGCTATGGTTCCTTCCCC+TGG + chr8_2:3752563-3752582 Msa1228280:CDS 50.0%
AAATGGCTAAGTCCAGGGGA+AGG - chr8_2:3752578-3752597 None:intergenic 50.0%
!! GAGGACCAAGTGTTGGAATG+AGG - chr8_2:3752664-3752683 None:intergenic 50.0%
GAGCACCTGAGGCATAGAAA+AGG - chr8_2:3752943-3752962 None:intergenic 50.0%
GGTCCCACTGGATAAACACA+AGG - chr8_2:3753247-3753266 None:intergenic 50.0%
TCAACTTGTGGTGCCCATGA+TGG - chr8_2:3753571-3753590 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG + chr8_2:3753639-3753658 Msa1228280:CDS 50.0%
ATGTGCTCAAAGTGGCTGTG+AGG + chr8_2:3753731-3753750 Msa1228280:CDS 50.0%
ATTGCTATGGTTCCTTCCCC+TGG + chr8_2:3752563-3752582 Msa1228280:CDS 50.0%
AAATGGCTAAGTCCAGGGGA+AGG - chr8_2:3752578-3752597 None:intergenic 50.0%
!! GAGGACCAAGTGTTGGAATG+AGG - chr8_2:3752664-3752683 None:intergenic 50.0%
GAGCACCTGAGGCATAGAAA+AGG - chr8_2:3752943-3752962 None:intergenic 50.0%
GGTCCCACTGGATAAACACA+AGG - chr8_2:3753247-3753266 None:intergenic 50.0%
TCAACTTGTGGTGCCCATGA+TGG - chr8_2:3753571-3753590 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG + chr8_2:3753639-3753658 Msa1228280:CDS 50.0%
ATGTGCTCAAAGTGGCTGTG+AGG + chr8_2:3753731-3753750 Msa1228280:CDS 50.0%
GGAGTGAGAGGACCAAGTGT+TGG - chr8_2:3752671-3752690 None:intergenic 55.0%
CAAAGTGGCTGTGAGGCCAA+AGG + chr8_2:3753738-3753757 Msa1228280:CDS 55.0%
GGAGTGAGAGGACCAAGTGT+TGG - chr8_2:3752671-3752690 None:intergenic 55.0%
CAAAGTGGCTGTGAGGCCAA+AGG + chr8_2:3753738-3753757 Msa1228280:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 3752545 3753954 3752545 ID=Msa1228280;Name=Msa1228280
chr8_2 mRNA 3752545 3753954 3752545 ID=Msa1228280-mRNA-1;Parent=Msa1228280;Name=Msa1228280-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|469
chr8_2 exon 3752545 3753954 3752545 ID=Msa1228280-mRNA-1:exon:1159;Parent=Msa1228280-mRNA-1
chr8_2 CDS 3752545 3753954 3752545 ID=Msa1228280-mRNA-1:cds;Parent=Msa1228280-mRNA-1
Gene Sequence

>Msa1228280

ATGAATAAAAAAACATACATTGCTATGGTTCCTTCCCCTGGACTTAGCCATTTAATTCCACAAGTTGAATTTGCCAAACAATTACTCCAACAACACAATGAATTCATTGTCACATTCCTCATTCCAACACTTGGTCCTCTCACTCCTTCAATGCAACAAGTCTTGAACACTCTTCCACCAAACATAGAATTCATTCTTCTTCCTCAAGTAAAACACCTTCCAGAGATTAATCTTGAACCTGCAACACAAATGAAACTCATTGTGAAACATTCTATTCCATTTCTACAAGAAGAAGTAAAATCACTCATTTCCAAAACTAACCTTGTTTCTTTAATCTTCGGTCTATTCTCAACCGATGCACATGAAGTTGCCATACAATTCAACTTATCTTCTTACCTTTTCTATGCCTCAGGTGCTCTTTCATTCTCATTCTTTCTCACTCTTCCGAATCTCGACGACTCTGTTTCCTCTGAAGTAGAGTTTTTAGAATCGGCTTATGAAACTGTGAATATTCCAGGTTGTGTCATCCCATTTCATATCAAAGATATTCCAGAAATAATTCTTTGTGAAAGATCAAATGTAAATTACAAAACATTTCTTGAAGTTTGTCAAAAACTCTCATTAGTTGATGGTTTTATAATCAGCACTTTCACTGATTTGGAGCCAGATATTATAAGGGTTCTTCAAGAAAAAGTGAAACCTTGTGTTTATCCAGTGGGACCCATTATTAGAAATGAGTCTAATTGTGAAGATAACATTAATTCAATGTGTTTAAGGTGGTTGGAAAATCAACCACCAAGTTCTGTTCTTTATGTATGTTTTGGGAGTGGTGGAACAGTTTCTCATGAACAACTCAATGAGTTAGCATTTGGATTAGAATTGAGTGGTAAAAAGTTCTTGTGGGTTGTGAGAGTTCCAAGTAAAGCTGTTAACTCTGCTTATTTTGTTGGAGCAAAAGATGATCCGTTAGAGTATTTACCAAATGGTTTCTTGGAAAGAAACAGAGAAAATGGATTGGTTGTTCCATCATGGGCACCACAAGTTGAGATTCTTGGTCATGGTTCAATTGGTGGTTTTTTGAGTCATTGTGGTTGGGGTTCAACTTTGGAGAGTGTGGTTAATGGTGTTCCTATGATTGCATGGCCTCTATTTGCAGAACAAAGATTGAATGCTAGATTATTGACAGATGTGCTCAAAGTGGCTGTGAGGCCAAAGGTTGATGATGAAAGTGGGATAGTGAAAAGAGAGGAAGTTGCTAAATGTGTAAAGAGAATCATGGAAGGTGATGAAAGCTTGGAGATACAAAAGAGAATCAAAGAATTGAGTGATGGTGCTGCTGTTGCAACAAGTGAACATGGTTCATCTAGGAAGGCACTCTCTTCTTTAGCATTGAAATTACATAACTTTTGA
Protein sequence

>Msa1228280

MNKKTYIAMVPSPGLSHLIPQVEFAKQLLQQHNEFIVTFLIPTLGPLTPSMQQVLNTLPPNIEFILLPQVKHLPEINLEPATQMKLIVKHSIPFLQEEVKSLISKTNLVSLIFGLFSTDAHEVAIQFNLSSYLFYASGALSFSFFLTLPNLDDSVSSEVEFLESAYETVNIPGCVIPFHIKDIPEIILCERSNVNYKTFLEVCQKLSLVDGFIISTFTDLEPDIIRVLQEKVKPCVYPVGPIIRNESNCEDNINSMCLRWLENQPPSSVLYVCFGSGGTVSHEQLNELAFGLELSGKKFLWVVRVPSKAVNSAYFVGAKDDPLEYLPNGFLERNRENGLVVPSWAPQVEILGHGSIGGFLSHCGWGSTLESVVNGVPMIAWPLFAEQRLNARLLTDVLKVAVRPKVDDESGIVKREEVAKCVKRIMEGDESLEIQKRIKELSDGAAVATSEHGSSRKALSSLALKLHNF*