AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1371060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1371060 MtrunA17_Chr1g0213531 89.498 438 36 8 1 432 1 434 0.0 760
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1371060 AT2G43235.1 51.429 350 153 6 76 417 96 436 3.96e-113 339

Find 123 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTACTTCAGTTCATATTAA+TGG 0.156695 tig0019144:-148512 Msa1371060:CDS
GTGATGGTGGTGGTGGTAGT+AGG 0.227752 tig0019144:+150226 None:intergenic
CGTCAATTATGCAGAAATTC+TGG 0.263143 tig0019144:-148738 Msa1371060:CDS
ACTAATAATAATCACTAAAA+AGG 0.263327 tig0019144:-146110 Msa1371060:three_prime_UTR
CGACTAACCATCTCCATTTC+AGG 0.280124 tig0019144:+147129 None:intergenic
CAGCCAGATATTATCTTTCA+TGG 0.288533 tig0019144:+146220 None:intergenic
TATTGTTTGAATTGGTTTCT+AGG 0.296767 tig0019144:-149973 Msa1371060:CDS
AAATGCATCTACCTACAATA+AGG 0.303394 tig0019144:-149933 Msa1371060:CDS
TGTATTCATCTTGTTCAGTT+AGG 0.309416 tig0019144:+149708 None:intergenic
AAGCACCTTATGTTTCTCTT+TGG 0.310733 tig0019144:-147072 Msa1371060:CDS
TGAAACGAATTGACGAATAT+TGG 0.311467 tig0019144:+150141 None:intergenic
CTACAATAAGGGTATTATTA+TGG 0.313025 tig0019144:-149921 Msa1371060:CDS
GCAGAGGTGGTGCTGTGAAT+GGG 0.329096 tig0019144:+149845 None:intergenic
CGCAGAGGTGGTGCTGTGAA+TGG 0.334279 tig0019144:+149844 None:intergenic
CCTTCCACCTTGCACTTCAT+AGG 0.346159 tig0019144:-150040 Msa1371060:CDS
GTCTATGACGGTTTCGAGCT+TGG 0.348693 tig0019144:+150189 None:intergenic
CTGTTGAACCTACAACTATT+CGG 0.355323 tig0019144:-148704 Msa1371060:CDS
GGCAAACATGTTGATGCTTT+AGG 0.356797 tig0019144:-147889 Msa1371060:CDS
GATTCTCAACAATTCCTTGC+TGG 0.359006 tig0019144:-148485 Msa1371060:CDS
TGTTATGGTCAAGAGTGAAT+AGG 0.360148 tig0019144:+150086 None:intergenic
GTTATGGTCAAGAGTGAATA+GGG 0.363866 tig0019144:+150087 None:intergenic
ATTAATAGTTGGCCACCATT+TGG 0.367825 tig0019144:+149760 None:intergenic
GTCTTTGAAGAATAATAATA+AGG 0.368500 tig0019144:-149807 Msa1371060:CDS
TTCAAAGACCGCTTAATTGA+CGG 0.375232 tig0019144:+149821 None:intergenic
TCTATGACGGTTTCGAGCTT+GGG 0.379395 tig0019144:+150190 None:intergenic
GTACCATGAAAGATAATATC+TGG 0.382735 tig0019144:-146223 Msa1371060:exon
GATAAGCATGGTTGTGGAAA+TGG 0.383399 tig0019144:+150328 None:intergenic
TTTGAGGGTATTGTTTGAAT+TGG 0.385299 tig0019144:-149981 Msa1371060:CDS
TGTCTCCTTGCAGCCTGAAA+TGG 0.390978 tig0019144:-147142 Msa1371060:intron
TTAATAGTTGGCCACCATTT+GGG 0.399245 tig0019144:+149761 None:intergenic
CATAATAATACCCTTATTGT+AGG 0.403671 tig0019144:+149922 None:intergenic
ATTTCCTCCCGAGGAATCTT+CGG 0.417407 tig0019144:-147833 Msa1371060:intron
GCATTGGGATTATTAATAGT+TGG 0.418090 tig0019144:+149749 None:intergenic
CTCAAAGGAAATTGCCCAAA+TGG 0.421635 tig0019144:-149775 Msa1371060:CDS
TGCAAGAGAAGCTCTTGGTT+TGG 0.423356 tig0019144:-147019 Msa1371060:intron
TGATGGTGGTGGTGGTAGTA+GGG 0.426177 tig0019144:+150227 None:intergenic
ATCGCGGTATGCCTCTTTGC+CGG 0.429399 tig0019144:+150117 None:intergenic
TGTTGAACCTACAACTATTC+GGG 0.435983 tig0019144:-148703 Msa1371060:CDS
ATTCTCAACAATTCCTTGCT+GGG 0.439822 tig0019144:-148484 Msa1371060:CDS
TGAAATGGAGATGGTTAGTC+GGG 0.443445 tig0019144:-147127 Msa1371060:CDS
TTTGAGTTTATTGTGGCGTT+TGG 0.448751 tig0019144:+150258 None:intergenic
GTAATGGAGGCTTTGTTAGT+TGG 0.449317 tig0019144:-150419 Msa1371060:five_prime_UTR
TTCAGAGAAGGTGGTGATGG+TGG 0.454637 tig0019144:+150213 None:intergenic
AGAGAAGGTGGTGATGGTGG+TGG 0.455294 tig0019144:+150216 None:intergenic
ATATCAAAAGCATTGGCATT+GGG 0.459121 tig0019144:+149734 None:intergenic
GGTGGAAAAGAGGTGGTTGT+TGG 0.469675 tig0019144:-149878 Msa1371060:CDS
ATTCGTCAATTCGTTTCATC+CGG 0.474810 tig0019144:-150136 Msa1371060:CDS
AATGCATCTACCTACAATAA+GGG 0.476176 tig0019144:-149932 Msa1371060:CDS
CAAAGATATGCCTTCTTCTA+CGG 0.476956 tig0019144:-147858 Msa1371060:CDS
GACTAACTTGAATGATATCA+TGG 0.480760 tig0019144:+149226 None:intergenic
TATGTTGTCTTCAAGTTGAC+CGG 0.481031 tig0019144:+146246 None:intergenic
TTATTATGGTGCGGAGAGAC+AGG 0.482055 tig0019144:-149907 Msa1371060:CDS
CAGAGGTGGTGCTGTGAATG+GGG 0.483055 tig0019144:+149846 None:intergenic
CAAAACAGAAAAGGCAATGA+TGG 0.486059 tig0019144:+150000 None:intergenic
GAAGGTGGTGATGGTGGTGG+TGG 0.486676 tig0019144:+150219 None:intergenic
AAGGAGTCCCGAATAGTTGT+AGG 0.489624 tig0019144:+148696 None:intergenic
GCTGGGTTTGCTGAAAACAT+TGG 0.494387 tig0019144:-148467 Msa1371060:CDS
AGCAATTATCGACAGTAGAA+TGG 0.497896 tig0019144:-149268 Msa1371060:CDS
AGAGGTGGTGCTGTGAATGG+GGG 0.499282 tig0019144:+149847 None:intergenic
GGAAGAAGCGGAGACGAGGC+GGG 0.504022 tig0019144:+150306 None:intergenic
TTATGCTATGTATGTAATGG+AGG 0.505856 tig0019144:-150432 None:intergenic
CAGAGAGTTTGAGTTTATTG+TGG 0.507204 tig0019144:+150251 None:intergenic
TTGACGAATATTGGAATCAA+AGG 0.510004 tig0019144:+150150 None:intergenic
CATATCAAAAGCATTGGCAT+TGG 0.512854 tig0019144:+149733 None:intergenic
CAATACCCTCAAAACAGAAA+AGG 0.514129 tig0019144:+149991 None:intergenic
GGAACAGACCGAAGATTCCT+CGG 0.515504 tig0019144:+147825 None:intergenic
GGGTTCAGAGAAGGTGGTGA+TGG 0.517996 tig0019144:+150210 None:intergenic
TTCGAGCTTGGGTTCAGAGA+AGG 0.521484 tig0019144:+150201 None:intergenic
CATTCTCAAAATTATTGTAC+CGG 0.523010 tig0019144:-146265 Msa1371060:CDS
CAGGAGTCTTGGTGGAAAAG+AGG 0.524436 tig0019144:-149888 Msa1371060:CDS
CTGAACAAGATGAATACAAG+AGG 0.525744 tig0019144:-149703 Msa1371060:CDS
AGGCGGGATAAGCATGGTTG+TGG 0.526418 tig0019144:+150322 None:intergenic
CGAATATTGGAATCAAAGGA+AGG 0.534213 tig0019144:+150154 None:intergenic
ATTAACTGATGCTCGATACA+AGG 0.536295 tig0019144:+148677 None:intergenic
GGGATTGCAAGAGAAGCTCT+TGG 0.537168 tig0019144:-147024 Msa1371060:CDS
GCAAAAGACAAGAGCGTGTG+CGG 0.541792 tig0019144:+148396 None:intergenic
TGGTTTCTAGGTTTGCGTCA+TGG 0.542864 tig0019144:-149961 Msa1371060:CDS
CAAAAGACAAGAGCGTGTGC+GGG 0.544785 tig0019144:+148397 None:intergenic
CGGAGAGACAGGAGTCTTGG+TGG 0.547028 tig0019144:-149896 Msa1371060:CDS
TATTGTGGCGTTTGGTGCGG+CGG 0.549812 tig0019144:+150266 None:intergenic
TTTGCAGTGAGGACAGTCAC+GGG 0.552218 tig0019144:-147044 Msa1371060:CDS
GTGCGGAGAGACAGGAGTCT+TGG 0.557171 tig0019144:-149899 Msa1371060:CDS
ATAAGGAAATTGTGTCTCAA+AGG 0.558092 tig0019144:-149790 Msa1371060:CDS
TAGGTCCATATCAAAAGCAT+TGG 0.559057 tig0019144:+149727 None:intergenic
GCGGCGACTGCGACGTACAA+AGG 0.562134 tig0019144:+150285 None:intergenic
CTGAAATGGAGATGGTTAGT+CGG 0.564106 tig0019144:-147128 Msa1371060:CDS
TGAACTGAAGTAGAGTAAGT+TGG 0.565051 tig0019144:+148521 None:intergenic
CAAAGGAAGAAGCGGAGACG+AGG 0.566667 tig0019144:+150302 None:intergenic
TTCAGTTCATATTAATGGCG+AGG 0.571469 tig0019144:-148507 Msa1371060:CDS
GATGCTTACAGACTCGTTCG+AGG 0.571898 tig0019144:-149680 Msa1371060:intron
CTTAATTGACGGCGCAGAGG+TGG 0.577365 tig0019144:+149832 None:intergenic
GAGGTGGTGCTGTGAATGGG+GGG 0.583838 tig0019144:+149848 None:intergenic
AACTTGAATGATATCATGGT+CGG 0.586857 tig0019144:+149230 None:intergenic
AGGAAGAAGCGGAGACGAGG+CGG 0.588432 tig0019144:+150305 None:intergenic
GAGCTTGGGTTCAGAGAAGG+TGG 0.588582 tig0019144:+150204 None:intergenic
GAGGAAATATCCGTAGAAGA+AGG 0.589817 tig0019144:+147848 None:intergenic
CTTGCAGCCTGAAATGGAGA+TGG 0.589877 tig0019144:-147136 Msa1371060:intron
CTTTACCAAAGAGAAACATA+AGG 0.591688 tig0019144:+147067 None:intergenic
TTATAGGCATTGGAAATGCA+AGG 0.604747 tig0019144:-147910 Msa1371060:intron
CCTATGAAGTGCAAGGTGGA+AGG 0.605754 tig0019144:+150040 None:intergenic
GAACAGACCGAAGATTCCTC+GGG 0.606284 tig0019144:+147826 None:intergenic
GAAGATTGTGAGGTCTATGA+CGG 0.607214 tig0019144:+150177 None:intergenic
GTTTGCAGTGAGGACAGTCA+CGG 0.610114 tig0019144:-147045 Msa1371060:CDS
AGCTGCAGACACAATTGTTG+CGG 0.612752 tig0019144:+148427 None:intergenic
ATTCGTTTCATCCGGCAAAG+AGG 0.619371 tig0019144:-150128 Msa1371060:CDS
GAATATTGGAATCAAAGGAA+GGG 0.626660 tig0019144:+150155 None:intergenic
AAAGGAAATTGCCCAAATGG+TGG 0.626680 tig0019144:-149772 Msa1371060:CDS
TCTACGGATATTTCCTCCCG+AGG 0.628715 tig0019144:-147842 Msa1371060:CDS
CCGCTTAATTGACGGCGCAG+AGG 0.630008 tig0019144:+149829 None:intergenic
CAAAGGAAGGGAAGATTGTG+AGG 0.632587 tig0019144:+150167 None:intergenic
GAGACGAGGCGGGATAAGCA+TGG 0.633362 tig0019144:+150316 None:intergenic
TGAAGTTCCTATGAAGTGCA+AGG 0.638935 tig0019144:+150033 None:intergenic
CCTCTGCGCCGTCAATTAAG+CGG 0.643562 tig0019144:-149829 Msa1371060:CDS
TGAACAAGATGAATACAAGA+GGG 0.644744 tig0019144:-149702 Msa1371060:CDS
GCGACGTACAAAGGAAGAAG+CGG 0.648097 tig0019144:+150294 None:intergenic
GTTTATTGTGGCGTTTGGTG+CGG 0.654882 tig0019144:+150263 None:intergenic
GAGTCTTGGTGGAAAAGAGG+TGG 0.656446 tig0019144:-149885 Msa1371060:CDS
CTTTGGTAAAGTTTGCAGTG+AGG 0.666887 tig0019144:-147055 Msa1371060:CDS
ATAAGGGTATTATTATGGTG+CGG 0.682812 tig0019144:-149916 Msa1371060:CDS
CAGACCGAAGATTCCTCGGG+AGG 0.694458 tig0019144:+147829 None:intergenic
TGAATAGGGTCTGTAAATCG+CGG 0.700229 tig0019144:+150101 None:intergenic
AGTTCCTATGAAGTGCAAGG+TGG 0.710148 tig0019144:+150036 None:intergenic
GAAATGGAGATGGTTAGTCG+GGG 0.713332 tig0019144:-147126 Msa1371060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAATTAGTATATTTATTAAA+AGG + tig0019144:147535-147554 None:intergenic 10.0%
!!! CTTTTAATAAATATACTAAT+TGG - tig0019144:147533-147552 Msa1371060:intron 10.0%
!!! AAATCATTTTCTATAATAAA+TGG - tig0019144:147695-147714 Msa1371060:intron 10.0%
!! AATCATTAAAATATCTAAAA+TGG + tig0019144:148917-148936 None:intergenic 10.0%
!!! TATTAAAAGGAATTAAGTTT+TGG + tig0019144:147522-147541 None:intergenic 15.0%
!!! GTTAAATATGAATATTTTCA+AGG - tig0019144:148351-148370 Msa1371060:intron 15.0%
!!! TTTTTGGTTTTTTCAATTAT+AGG - tig0019144:148585-148604 Msa1371060:intron 15.0%
!! TATTTGCAAATTATTGTTTA+AGG + tig0019144:148710-148729 None:intergenic 15.0%
!! AATATTCATATAAGAAAAGT+GGG + tig0019144:148751-148770 None:intergenic 15.0%
!! AAATATTCATATAAGAAAAG+TGG + tig0019144:148752-148771 None:intergenic 15.0%
!! TTATCCTTTATTATTAACAA+CGG - tig0019144:148835-148854 Msa1371060:intron 15.0%
!!! ATATCTAAAATGGATAAATA+TGG + tig0019144:148907-148926 None:intergenic 15.0%
!! ACTAATAATAATCACTAAAA+AGG - tig0019144:150401-150420 Msa1371060:five_prime_UTR 15.0%
!!! GTCTTTGAAGAATAATAATA+AGG - tig0019144:146704-146723 Msa1371060:intron 20.0%
!! TTCAATAGCTAATTAATCTA+AGG + tig0019144:147335-147354 None:intergenic 20.0%
!! ACAACATTTAAGAAAGATTT+AGG + tig0019144:148312-148331 None:intergenic 20.0%
!! AATACTCCATTAAAATTCAT+GGG - tig0019144:148562-148581 Msa1371060:intron 20.0%
!! TAATTCTTTATGCATAAATG+AGG - tig0019144:148977-148996 Msa1371060:intron 20.0%
!!! AAAGAAAACGTTTGAAATTT+CGG - tig0019144:149114-149133 Msa1371060:intron 20.0%
!!! ATACTATTAAGGTTTTTATG+AGG - tig0019144:149737-149756 Msa1371060:CDS 20.0%
!!! TACTATTAAGGTTTTTATGA+GGG - tig0019144:149738-149757 Msa1371060:CDS 20.0%
!!! TGTTATAATTTTGATGTTCA+TGG - tig0019144:149974-149993 Msa1371060:CDS 20.0%
!!! GTTATAATTTTGATGTTCAT+GGG - tig0019144:149975-149994 Msa1371060:CDS 20.0%
!! TAAATAAAATCATGATCGTT+GGG + tig0019144:150006-150025 None:intergenic 20.0%
!! ATAAATAAAATCATGATCGT+TGG + tig0019144:150007-150026 None:intergenic 20.0%
!! AAAAATTCAAACATCAAAGA+AGG + tig0019144:150186-150205 None:intergenic 20.0%
!! AAATGATGACTCTTTTGTTA+TGG + tig0019144:146443-146462 None:intergenic 25.0%
!! TATTGTTTGAATTGGTTTCT+AGG - tig0019144:146538-146557 Msa1371060:intron 25.0%
! CATAATAATACCCTTATTGT+AGG + tig0019144:146592-146611 None:intergenic 25.0%
!!! CTACAATAAGGGTATTATTA+TGG - tig0019144:146590-146609 Msa1371060:intron 25.0%
! TGAAAATTTCTCATGTTAGT+TGG + tig0019144:146988-147007 None:intergenic 25.0%
! TCTTTCTTGTCTTGTATTAT+AGG - tig0019144:147137-147156 Msa1371060:intron 25.0%
!! TAAGTTGCAAGTTGAATTAA+AGG + tig0019144:147209-147228 None:intergenic 25.0%
! TAAGGATGAAGTAAATGAAT+GGG + tig0019144:147317-147336 None:intergenic 25.0%
!!! TACTGATGTGAAAGTTTTTT+TGG - tig0019144:147731-147750 Msa1371060:intron 25.0%
! TCTACTTCAGTTCATATTAA+TGG - tig0019144:147999-148018 Msa1371060:intron 25.0%
! TTACTCTTAATCTTATGATC+TGG - tig0019144:148155-148174 Msa1371060:intron 25.0%
!! CAAGGTTATATTTTCTATGA+TGG - tig0019144:148369-148388 Msa1371060:intron 25.0%
! GAATACTCCATTAAAATTCA+TGG - tig0019144:148561-148580 Msa1371060:intron 25.0%
!! CAAAAACCCATGAATTTTAA+TGG + tig0019144:148571-148590 None:intergenic 25.0%
!! CATTAAAATTCATGGGTTTT+TGG - tig0019144:148569-148588 Msa1371060:intron 25.0%
!!! GTTTTTTCAATTATAGGCAT+TGG - tig0019144:148591-148610 Msa1371060:intron 25.0%
! AATAATAAAGGATAACTGTG+AGG + tig0019144:148830-148849 None:intergenic 25.0%
! AACTCCGTTGTTAATAATAA+AGG + tig0019144:148842-148861 None:intergenic 25.0%
! AATTGAGAAACTTTAATGAG+TGG + tig0019144:149056-149075 None:intergenic 25.0%
!! AAGAAAACGTTTGAAATTTC+GGG - tig0019144:149115-149134 Msa1371060:intron 25.0%
! TATAGAGAACAAAACACATT+GGG - tig0019144:149166-149185 Msa1371060:intron 25.0%
! ATTGCTATACATGTTTGAAA+TGG - tig0019144:149225-149244 Msa1371060:intron 25.0%
!!! ATAAGCATTAGATGTTGTTT+TGG - tig0019144:149261-149280 Msa1371060:CDS 25.0%
! CTCTCTAATTGTACTTATTT+GGG - tig0019144:149345-149364 Msa1371060:intron 25.0%
! TCTCTAATTGTACTTATTTG+GGG - tig0019144:149346-149365 Msa1371060:intron 25.0%
! AATTGAAAGATAATTGTAGC+TGG - tig0019144:149581-149600 Msa1371060:intron 25.0%
! AATTGAAAGATAATTGTAGC+TGG - tig0019144:149581-149600 Msa1371060:intron 25.0%
!! ATGTGGAAATTTTCTTTTTC+AGG + tig0019144:149706-149725 None:intergenic 25.0%
! TAGATGTGATGATACTATTA+AGG - tig0019144:149726-149745 Msa1371060:CDS 25.0%
!! ACTATTAAGGTTTTTATGAG+GGG - tig0019144:149739-149758 Msa1371060:CDS 25.0%
! ACATGTAACCATTACTTAAA+TGG - tig0019144:149881-149900 Msa1371060:CDS 25.0%
! AAACTTGACCATTTAAGTAA+TGG + tig0019144:149892-149911 None:intergenic 25.0%
! GTAAAAATGCTTTAGTACAA+TGG - tig0019144:150043-150062 Msa1371060:CDS 25.0%
! GAGGATTAGATTAAAGAATT+GGG + tig0019144:150209-150228 None:intergenic 25.0%
! CATTCTCAAAATTATTGTAC+CGG - tig0019144:150246-150265 Msa1371060:CDS 25.0%
GAATATTGGAATCAAAGGAA+GGG + tig0019144:146359-146378 None:intergenic 30.0%
TTGACGAATATTGGAATCAA+AGG + tig0019144:146364-146383 None:intergenic 30.0%
TGAAACGAATTGACGAATAT+TGG + tig0019144:146373-146392 None:intergenic 30.0%
!! TTTGAGGGTATTGTTTGAAT+TGG - tig0019144:146530-146549 Msa1371060:intron 30.0%
AAATGCATCTACCTACAATA+AGG - tig0019144:146578-146597 Msa1371060:intron 30.0%
AATGCATCTACCTACAATAA+GGG - tig0019144:146579-146598 Msa1371060:intron 30.0%
!! ATAAGGGTATTATTATGGTG+CGG - tig0019144:146595-146614 Msa1371060:intron 30.0%
ATAAGGAAATTGTGTCTCAA+AGG - tig0019144:146721-146740 Msa1371060:intron 30.0%
GCATTGGGATTATTAATAGT+TGG + tig0019144:146765-146784 None:intergenic 30.0%
!! ATATCAAAAGCATTGGCATT+GGG + tig0019144:146780-146799 None:intergenic 30.0%
TGTATTCATCTTGTTCAGTT+AGG + tig0019144:146806-146825 None:intergenic 30.0%
TGAACAAGATGAATACAAGA+GGG - tig0019144:146809-146828 Msa1371060:intron 30.0%
ATGAGGAGTAAATGAATGAA+GGG + tig0019144:146876-146895 None:intergenic 30.0%
TCAACATCAAAGTAAACATG+AGG + tig0019144:146893-146912 None:intergenic 30.0%
ACATATCTACGAGAGTAAAT+TGG + tig0019144:146958-146977 None:intergenic 30.0%
AACTTGAATGATATCATGGT+CGG + tig0019144:147284-147303 None:intergenic 30.0%
GACTAACTTGAATGATATCA+TGG + tig0019144:147288-147307 None:intergenic 30.0%
AAGGATGAAGTAAATGAATG+GGG + tig0019144:147316-147335 None:intergenic 30.0%
CTAAGGATGAAGTAAATGAA+TGG + tig0019144:147318-147337 None:intergenic 30.0%
TCTATATCTACACAAAACCA+CGG + tig0019144:147576-147595 None:intergenic 30.0%
!! TAATCTTGTCTTTTAGCCTT+TGG - tig0019144:148178-148197 Msa1371060:intron 30.0%
!! AATCTTGTCTTTTAGCCTTT+GGG - tig0019144:148179-148198 Msa1371060:intron 30.0%
TGTAACTACTAGCATTCTAA+AGG - tig0019144:148222-148241 Msa1371060:intron 30.0%
! AAGGCAGTTATATTTTCACT+CGG - tig0019144:148241-148260 Msa1371060:intron 30.0%
ACTCAAATGAAAGAACTAGA+TGG - tig0019144:148394-148413 Msa1371060:CDS 30.0%
CTCAAATGAAAGAACTAGAT+GGG - tig0019144:148395-148414 Msa1371060:CDS 30.0%
CAATTTAGAGAGCTTACAAT+TGG + tig0019144:148438-148457 None:intergenic 30.0%
TAAGCTCTCTAAATTGATCA+GGG - tig0019144:148442-148461 Msa1371060:CDS 30.0%
! CATTTAAGTTACACACTTTC+AGG + tig0019144:148484-148503 None:intergenic 30.0%
CTTCCTAGAAAAAGAGTTAT+CGG + tig0019144:148523-148542 None:intergenic 30.0%
!! TTTTAATGGAGTATTCACGT+GGG + tig0019144:148557-148576 None:intergenic 30.0%
!! ATTTTAATGGAGTATTCACG+TGG + tig0019144:148558-148577 None:intergenic 30.0%
TGTTCTCTTTATTCCTTACT+CGG - tig0019144:148778-148797 Msa1371060:intron 30.0%
GTTCTTGGCTATTAGATATT+TGG - tig0019144:148877-148896 Msa1371060:intron 30.0%
! TAATGATTTGTCTTTCACTC+CGG - tig0019144:148929-148948 Msa1371060:intron 30.0%
ACGAGTGAATTTACATTTAC+CGG + tig0019144:148951-148970 None:intergenic 30.0%
AATGAGGAGTAAATACTTTC+TGG - tig0019144:148993-149012 Msa1371060:intron 30.0%
ATGAGGAGTAAATACTTTCT+GGG - tig0019144:148994-149013 Msa1371060:intron 30.0%
TTAATGAGTGGTTATACAGA+TGG + tig0019144:149044-149063 None:intergenic 30.0%
! AGAAAACGTTTGAAATTTCG+GGG - tig0019144:149116-149135 Msa1371060:intron 30.0%
! TTTTGTTCTCTATACTACAG+AGG + tig0019144:149160-149179 None:intergenic 30.0%
GTATAGAGAACAAAACACAT+TGG - tig0019144:149165-149184 Msa1371060:intron 30.0%
ACATCTAATGCTTATCTCTA+TGG + tig0019144:149256-149275 None:intergenic 30.0%
AATTCATAAATCAGCAGACA+AGG + tig0019144:149316-149335 None:intergenic 30.0%
GCTCTCTAATTGTACTTATT+TGG - tig0019144:149344-149363 Msa1371060:intron 30.0%
CTTTACCAAAGAGAAACATA+AGG + tig0019144:149447-149466 None:intergenic 30.0%
!!! GGAAATTTTCTTTTTCAGGA+GGG + tig0019144:149702-149721 None:intergenic 30.0%
!!! TGGAAATTTTCTTTTTCAGG+AGG + tig0019144:149703-149722 None:intergenic 30.0%
TAGTATCATCACATCTAATG+TGG + tig0019144:149723-149742 None:intergenic 30.0%
!! CTGAAAGAGTATTTGAACAT+TGG - tig0019144:149816-149835 Msa1371060:CDS 30.0%
!! ATACTATGAAGTTCTGAATG+AGG - tig0019144:149847-149866 Msa1371060:CDS 30.0%
!! TACTATGAAGTTCTGAATGA+GGG - tig0019144:149848-149867 Msa1371060:CDS 30.0%
GTAAAGAGCAATTCTTTACA+TGG - tig0019144:150065-150084 Msa1371060:CDS 30.0%
!! AGTTGTCTTGTGTTATTTCT+TGG - tig0019144:150152-150171 Msa1371060:CDS 30.0%
GGAGGATTAGATTAAAGAAT+TGG + tig0019144:150210-150229 None:intergenic 30.0%
GTACCATGAAAGATAATATC+TGG - tig0019144:150288-150307 Msa1371060:CDS 30.0%
! TTTGAGTTTATTGTGGCGTT+TGG + tig0019144:146256-146275 None:intergenic 35.0%
! CAGAGAGTTTGAGTTTATTG+TGG + tig0019144:146263-146282 None:intergenic 35.0%
CGAATATTGGAATCAAAGGA+AGG + tig0019144:146360-146379 None:intergenic 35.0%
ATTCGTCAATTCGTTTCATC+CGG - tig0019144:146375-146394 Msa1371060:intron 35.0%
GTTATGGTCAAGAGTGAATA+GGG + tig0019144:146427-146446 None:intergenic 35.0%
TGTTATGGTCAAGAGTGAAT+AGG + tig0019144:146428-146447 None:intergenic 35.0%
CAAAACAGAAAAGGCAATGA+TGG + tig0019144:146514-146533 None:intergenic 35.0%
! TCATTGCCTTTTCTGTTTTG+AGG - tig0019144:146514-146533 Msa1371060:intron 35.0%
!! CATTGCCTTTTCTGTTTTGA+GGG - tig0019144:146515-146534 Msa1371060:intron 35.0%
CAATACCCTCAAAACAGAAA+AGG + tig0019144:146523-146542 None:intergenic 35.0%
TTCAAAGACCGCTTAATTGA+CGG + tig0019144:146693-146712 None:intergenic 35.0%
TTAATAGTTGGCCACCATTT+GGG + tig0019144:146753-146772 None:intergenic 35.0%
ATTAATAGTTGGCCACCATT+TGG + tig0019144:146754-146773 None:intergenic 35.0%
!! CATATCAAAAGCATTGGCAT+TGG + tig0019144:146781-146800 None:intergenic 35.0%
! CAATGCCAATGCTTTTGATA+TGG - tig0019144:146779-146798 Msa1371060:intron 35.0%
! TAGGTCCATATCAAAAGCAT+TGG + tig0019144:146787-146806 None:intergenic 35.0%
CTGAACAAGATGAATACAAG+AGG - tig0019144:146808-146827 Msa1371060:intron 35.0%
CATGAGGAGTAAATGAATGA+AGG + tig0019144:146877-146896 None:intergenic 35.0%
! CTTTGATGTTGATTGAGTGA+AGG - tig0019144:146901-146920 Msa1371060:intron 35.0%
TATCTACGAGAGTAAATTGG+AGG + tig0019144:146955-146974 None:intergenic 35.0%
ACATGAGAGTTGAAAGTAAG+AGG + tig0019144:147066-147085 None:intergenic 35.0%
ATTCTACTGTCGATAATTGC+TGG + tig0019144:147244-147263 None:intergenic 35.0%
AGCAATTATCGACAGTAGAA+TGG - tig0019144:147243-147262 Msa1371060:intron 35.0%
GAGTATAGTAAAGGACCAAA+GGG + tig0019144:147429-147448 None:intergenic 35.0%
AGAGTATAGTAAAGGACCAA+AGG + tig0019144:147430-147449 None:intergenic 35.0%
CGTCAATTATGCAGAAATTC+TGG - tig0019144:147773-147792 Msa1371060:intron 35.0%
CTGTTGAACCTACAACTATT+CGG - tig0019144:147807-147826 Msa1371060:intron 35.0%
TGTTGAACCTACAACTATTC+GGG - tig0019144:147808-147827 Msa1371060:intron 35.0%
ATTAACTGATGCTCGATACA+AGG + tig0019144:147837-147856 None:intergenic 35.0%
TGAACTGAAGTAGAGTAAGT+TGG + tig0019144:147993-148012 None:intergenic 35.0%
TTCAGTTCATATTAATGGCG+AGG - tig0019144:148004-148023 Msa1371060:intron 35.0%
ATTCTCAACAATTCCTTGCT+GGG - tig0019144:148027-148046 Msa1371060:intron 35.0%
ACAATCTAGTAGAAACCCAA+AGG + tig0019144:148197-148216 None:intergenic 35.0%
! ATTTTCACTCGGAATACTGT+TGG - tig0019144:148252-148271 Msa1371060:intron 35.0%
GTAAGCTCTCTAAATTGATC+AGG - tig0019144:148441-148460 Msa1371060:CDS 35.0%
!! TTATAGGCATTGGAAATGCA+AGG - tig0019144:148601-148620 Msa1371060:intron 35.0%
CAAAGATATGCCTTCTTCTA+CGG - tig0019144:148653-148672 Msa1371060:intron 35.0%
TATTCCTTACTCGGTATGAT+AGG - tig0019144:148787-148806 Msa1371060:intron 35.0%
AAATCCTATCATACCGAGTA+AGG + tig0019144:148794-148813 None:intergenic 35.0%
TTACTCGGTATGATAGGATT+TGG - tig0019144:148793-148812 Msa1371060:intron 35.0%
ACCATTTATGTCAGTGTTCT+TGG - tig0019144:148862-148881 Msa1371060:intron 35.0%
TGAGGAGTAAATACTTTCTG+GGG - tig0019144:148995-149014 Msa1371060:intron 35.0%
! TTTCTGGGGAAATTTAGATG+AGG - tig0019144:149009-149028 Msa1371060:intron 35.0%
TAATGCTTATCTCTATGGAG+TGG + tig0019144:149251-149270 None:intergenic 35.0%
!!! AGATGTTGTTTTGGATGAGT+AGG - tig0019144:149270-149289 Msa1371060:intron 35.0%
AAGCACCTTATGTTTCTCTT+TGG - tig0019144:149439-149458 Msa1371060:intron 35.0%
AGTGCAAGATCTGCAAAATA+GGG + tig0019144:149532-149551 None:intergenic 35.0%
TAGTGCAAGATCTGCAAAAT+AGG + tig0019144:149533-149552 None:intergenic 35.0%
CAATCTTGACGATTTAAGCA+TGG + tig0019144:149782-149801 None:intergenic 35.0%
!! ACTATGAAGTTCTGAATGAG+GGG - tig0019144:149849-149868 Msa1371060:CDS 35.0%
GAATGCGTCTACACAAATAA+AGG + tig0019144:150231-150250 None:intergenic 35.0%
!! TATGTTGTCTTCAAGTTGAC+CGG + tig0019144:150268-150287 None:intergenic 35.0%
CAGCCAGATATTATCTTTCA+TGG + tig0019144:150294-150313 None:intergenic 35.0%
!! GTAATGGAGGCTTTGTTAGT+TGG - tig0019144:146092-146111 Msa1371060:three_prime_UTR 40.0%
GATAAGCATGGTTGTGGAAA+TGG + tig0019144:146186-146205 None:intergenic 40.0%
GAAGATTGTGAGGTCTATGA+CGG + tig0019144:146337-146356 None:intergenic 40.0%
TGAATAGGGTCTGTAAATCG+CGG + tig0019144:146413-146432 None:intergenic 40.0%
TGAAGTTCCTATGAAGTGCA+AGG + tig0019144:146481-146500 None:intergenic 40.0%
CTCAAAGGAAATTGCCCAAA+TGG - tig0019144:146736-146755 Msa1371060:intron 40.0%
AAAGGAAATTGCCCAAATGG+TGG - tig0019144:146739-146758 Msa1371060:intron 40.0%
! ATGGTCGGATATGTCTTTTG+CGG + tig0019144:147269-147288 None:intergenic 40.0%
GCTGTGGTAGAGTATAGTAA+AGG + tig0019144:147438-147457 None:intergenic 40.0%
TATCTTCTATGCTGTAGCTG+TGG + tig0019144:147454-147473 None:intergenic 40.0%
! CATAAAGATACTTGCTACCG+TGG - tig0019144:147556-147575 Msa1371060:intron 40.0%
!!! TTGTTTTAGATGCTTGCAGC+AGG - tig0019144:147858-147877 Msa1371060:CDS 40.0%
GCTACCTAGCAGTAAAGAAA+GGG + tig0019144:147911-147930 None:intergenic 40.0%
TGCTACCTAGCAGTAAAGAA+AGG + tig0019144:147912-147931 None:intergenic 40.0%
GATTCTCAACAATTCCTTGC+TGG - tig0019144:148026-148045 Msa1371060:intron 40.0%
CCTAGAAAAAGAGTTATCGG+AGG + tig0019144:148520-148539 None:intergenic 40.0%
! CCTCCGATAACTCTTTTTCT+AGG - tig0019144:148517-148536 Msa1371060:CDS 40.0%
GGCAAACATGTTGATGCTTT+AGG - tig0019144:148622-148641 Msa1371060:intron 40.0%
GAGGAAATATCCGTAGAAGA+AGG + tig0019144:148666-148685 None:intergenic 40.0%
GCCAAGAACACTGACATAAA+TGG + tig0019144:148866-148885 None:intergenic 40.0%
TTGAAATTTCGGGGAAGTGA+CGG - tig0019144:149125-149144 Msa1371060:intron 40.0%
!! TGTTTTGGATGAGTAGGTAG+AGG - tig0019144:149276-149295 Msa1371060:intron 40.0%
!! GTTTTGGATGAGTAGGTAGA+GGG - tig0019144:149277-149296 Msa1371060:intron 40.0%
CTGAAATGGAGATGGTTAGT+CGG - tig0019144:149383-149402 Msa1371060:intron 40.0%
! TGAAATGGAGATGGTTAGTC+GGG - tig0019144:149384-149403 Msa1371060:intron 40.0%
CTTTGGTAAAGTTTGCAGTG+AGG - tig0019144:149456-149475 Msa1371060:intron 40.0%
! ATCTGCAAAATAGGGTTAGC+AGG + tig0019144:149524-149543 None:intergenic 40.0%
GACAACTCACATGCAATCTT+TGG + tig0019144:150139-150158 None:intergenic 40.0%
TGCGTCTACACAAATAAAGG+AGG + tig0019144:150228-150247 None:intergenic 40.0%
! GTTTATTGTGGCGTTTGGTG+CGG + tig0019144:146251-146270 None:intergenic 45.0%
TCTATGACGGTTTCGAGCTT+GGG + tig0019144:146324-146343 None:intergenic 45.0%
CAAAGGAAGGGAAGATTGTG+AGG + tig0019144:146347-146366 None:intergenic 45.0%
ATTCGTTTCATCCGGCAAAG+AGG - tig0019144:146383-146402 Msa1371060:intron 45.0%
AGTTCCTATGAAGTGCAAGG+TGG + tig0019144:146478-146497 None:intergenic 45.0%
! TGGTTTCTAGGTTTGCGTCA+TGG - tig0019144:146550-146569 Msa1371060:intron 45.0%
TTATTATGGTGCGGAGAGAC+AGG - tig0019144:146604-146623 Msa1371060:intron 45.0%
GAGATATCTTTCACGCCCTT+TGG - tig0019144:147411-147430 Msa1371060:intron 45.0%
CTATGCAGTTGCACTAACTC+AGG + tig0019144:147489-147508 None:intergenic 45.0%
AAGGAGTCCCGAATAGTTGT+AGG + tig0019144:147818-147837 None:intergenic 45.0%
GTGTCCCTTTCTTTACTGCT+AGG - tig0019144:147904-147923 Msa1371060:CDS 45.0%
! TGTTTTCAGCAAACCCAGCA+AGG + tig0019144:148043-148062 None:intergenic 45.0%
!! GCTGGGTTTGCTGAAAACAT+TGG - tig0019144:148044-148063 Msa1371060:intron 45.0%
! TTGCGGCACGAACATTTTCA+AGG + tig0019144:148070-148089 None:intergenic 45.0%
AGCTGCAGACACAATTGTTG+CGG + tig0019144:148087-148106 None:intergenic 45.0%
! CTCTTGTCTTTTGCAGGCTT+GGG - tig0019144:148124-148143 Msa1371060:intron 45.0%
ATTTCCTCCCGAGGAATCTT+CGG - tig0019144:148678-148697 Msa1371060:CDS 45.0%
CGACTAACCATCTCCATTTC+AGG + tig0019144:149385-149404 None:intergenic 45.0%
! GAAATGGAGATGGTTAGTCG+GGG - tig0019144:149385-149404 Msa1371060:intron 45.0%
TGCAAGAGAAGCTCTTGGTT+TGG - tig0019144:149492-149511 Msa1371060:intron 45.0%
GCGACGTACAAAGGAAGAAG+CGG + tig0019144:146220-146239 None:intergenic 50.0%
!! TGATGGTGGTGGTGGTAGTA+GGG + tig0019144:146287-146306 None:intergenic 50.0%
!! TTCAGAGAAGGTGGTGATGG+TGG + tig0019144:146301-146320 None:intergenic 50.0%
TTCGAGCTTGGGTTCAGAGA+AGG + tig0019144:146313-146332 None:intergenic 50.0%
GTCTATGACGGTTTCGAGCT+TGG + tig0019144:146325-146344 None:intergenic 50.0%
CCTATGAAGTGCAAGGTGGA+AGG + tig0019144:146474-146493 None:intergenic 50.0%
CCTTCCACCTTGCACTTCAT+AGG - tig0019144:146471-146490 Msa1371060:intron 50.0%
CAGGAGTCTTGGTGGAAAAG+AGG - tig0019144:146623-146642 Msa1371060:intron 50.0%
GAGTCTTGGTGGAAAAGAGG+TGG - tig0019144:146626-146645 Msa1371060:intron 50.0%
GGTGGAAAAGAGGTGGTTGT+TGG - tig0019144:146633-146652 Msa1371060:intron 50.0%
GATGCTTACAGACTCGTTCG+AGG - tig0019144:146831-146850 Msa1371060:intron 50.0%
AAAGAAAGGGACACAGACGC+AGG + tig0019144:147898-147917 None:intergenic 50.0%
! CAAAAGACAAGAGCGTGTGC+GGG + tig0019144:148117-148136 None:intergenic 50.0%
! GCAAAAGACAAGAGCGTGTG+CGG + tig0019144:148118-148137 None:intergenic 50.0%
! CACACGCTCTTGTCTTTTGC+AGG - tig0019144:148118-148137 Msa1371060:intron 50.0%
! GCTCTTGTCTTTTGCAGGCT+TGG - tig0019144:148123-148142 Msa1371060:intron 50.0%
TCTACGGATATTTCCTCCCG+AGG - tig0019144:148669-148688 Msa1371060:CDS 50.0%
GAACAGACCGAAGATTCCTC+GGG + tig0019144:148688-148707 None:intergenic 50.0%
GGAACAGACCGAAGATTCCT+CGG + tig0019144:148689-148708 None:intergenic 50.0%
TGTCTCCTTGCAGCCTGAAA+TGG - tig0019144:149369-149388 Msa1371060:intron 50.0%
CATCTCCATTTCAGGCTGCA+AGG + tig0019144:149377-149396 None:intergenic 50.0%
CTTGCAGCCTGAAATGGAGA+TGG - tig0019144:149375-149394 Msa1371060:intron 50.0%
GTTTGCAGTGAGGACAGTCA+CGG - tig0019144:149466-149485 Msa1371060:intron 50.0%
TTTGCAGTGAGGACAGTCAC+GGG - tig0019144:149467-149486 Msa1371060:intron 50.0%
GGGATTGCAAGAGAAGCTCT+TGG - tig0019144:149487-149506 Msa1371060:intron 50.0%
AGGCGGGATAAGCATGGTTG+TGG + tig0019144:146192-146211 None:intergenic 55.0%
CAAAGGAAGAAGCGGAGACG+AGG + tig0019144:146212-146231 None:intergenic 55.0%
!! TATTGTGGCGTTTGGTGCGG+CGG + tig0019144:146248-146267 None:intergenic 55.0%
!! GTGATGGTGGTGGTGGTAGT+AGG + tig0019144:146288-146307 None:intergenic 55.0%
!! AGAGAAGGTGGTGATGGTGG+TGG + tig0019144:146298-146317 None:intergenic 55.0%
GGGTTCAGAGAAGGTGGTGA+TGG + tig0019144:146304-146323 None:intergenic 55.0%
GAGCTTGGGTTCAGAGAAGG+TGG + tig0019144:146310-146329 None:intergenic 55.0%
ATCGCGGTATGCCTCTTTGC+CGG + tig0019144:146397-146416 None:intergenic 55.0%
!! AGAGGTGGTGCTGTGAATGG+GGG + tig0019144:146667-146686 None:intergenic 55.0%
!! CAGAGGTGGTGCTGTGAATG+GGG + tig0019144:146668-146687 None:intergenic 55.0%
!! GCAGAGGTGGTGCTGTGAAT+GGG + tig0019144:146669-146688 None:intergenic 55.0%
CTTAATTGACGGCGCAGAGG+TGG + tig0019144:146682-146701 None:intergenic 55.0%
CCTCTGCGCCGTCAATTAAG+CGG - tig0019144:146682-146701 Msa1371060:intron 55.0%
GCAGTTGCACTAACTCAGGC+AGG + tig0019144:147485-147504 None:intergenic 55.0%
GAGACGAGGCGGGATAAGCA+TGG + tig0019144:146198-146217 None:intergenic 60.0%
AGGAAGAAGCGGAGACGAGG+CGG + tig0019144:146209-146228 None:intergenic 60.0%
!! GAAGGTGGTGATGGTGGTGG+TGG + tig0019144:146295-146314 None:intergenic 60.0%
GTGCGGAGAGACAGGAGTCT+TGG - tig0019144:146612-146631 Msa1371060:intron 60.0%
CGGAGAGACAGGAGTCTTGG+TGG - tig0019144:146615-146634 Msa1371060:intron 60.0%
!! GAGGTGGTGCTGTGAATGGG+GGG + tig0019144:146666-146685 None:intergenic 60.0%
!! CGCAGAGGTGGTGCTGTGAA+TGG + tig0019144:146670-146689 None:intergenic 60.0%
CCGCTTAATTGACGGCGCAG+AGG + tig0019144:146685-146704 None:intergenic 60.0%
CAGACCGAAGATTCCTCGGG+AGG + tig0019144:148685-148704 None:intergenic 60.0%
GGAAGAAGCGGAGACGAGGC+GGG + tig0019144:146208-146227 None:intergenic 65.0%
GCGGCGACTGCGACGTACAA+AGG + tig0019144:146229-146248 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0019144 gene 146092 150441 146092 ID=Msa1371060;Name=Msa1371060
tig0019144 mRNA 146092 150441 146092 ID=Msa1371060-mRNA-1;Parent=Msa1371060;Name=Msa1371060-mRNA-1;_AED=0.06;_eAED=0.06;_QI=67|1|1|1|1|1|7|145|432
tig0019144 exon 146092 146290 146092 ID=Msa1371060-mRNA-1:exon:2017;Parent=Msa1371060-mRNA-1
tig0019144 exon 147020 147151 147020 ID=Msa1371060-mRNA-1:exon:2016;Parent=Msa1371060-mRNA-1
tig0019144 exon 147834 147926 147834 ID=Msa1371060-mRNA-1:exon:2015;Parent=Msa1371060-mRNA-1
tig0019144 exon 148388 148547 148388 ID=Msa1371060-mRNA-1:exon:2014;Parent=Msa1371060-mRNA-1
tig0019144 exon 148654 148763 148654 ID=Msa1371060-mRNA-1:exon:2013;Parent=Msa1371060-mRNA-1
tig0019144 exon 149233 149288 149233 ID=Msa1371060-mRNA-1:exon:2012;Parent=Msa1371060-mRNA-1
tig0019144 exon 149681 150441 149681 ID=Msa1371060-mRNA-1:exon:2011;Parent=Msa1371060-mRNA-1
tig0019144 five_prime_UTR 150375 150441 150375 ID=Msa1371060-mRNA-1:five_prime_utr;Parent=Msa1371060-mRNA-1
tig0019144 CDS 149681 150374 149681 ID=Msa1371060-mRNA-1:cds;Parent=Msa1371060-mRNA-1
tig0019144 CDS 149233 149288 149233 ID=Msa1371060-mRNA-1:cds;Parent=Msa1371060-mRNA-1
tig0019144 CDS 148654 148763 148654 ID=Msa1371060-mRNA-1:cds;Parent=Msa1371060-mRNA-1
tig0019144 CDS 148388 148547 148388 ID=Msa1371060-mRNA-1:cds;Parent=Msa1371060-mRNA-1
tig0019144 CDS 147834 147926 147834 ID=Msa1371060-mRNA-1:cds;Parent=Msa1371060-mRNA-1
tig0019144 CDS 147020 147151 147020 ID=Msa1371060-mRNA-1:cds;Parent=Msa1371060-mRNA-1
tig0019144 CDS 146237 146290 146237 ID=Msa1371060-mRNA-1:cds;Parent=Msa1371060-mRNA-1
tig0019144 three_prime_UTR 146092 146236 146092 ID=Msa1371060-mRNA-1:three_prime_utr;Parent=Msa1371060-mRNA-1
Gene Sequence

>Msa1371060

ATGTTTTCTTCTTCTTTCACTCTTCCATTTCCACAACCATGCTTATCCCGCCTCGTCTCCGCTTCTTCCTTTGTACGTCGCAGTCGCCGCCGCACCAAACGCCACAATAAACTCAAACTCTCTGACCCTACTACCACCACCACCATCACCACCTTCTCTGAACCCAAGCTCGAAACCGTCATAGACCTCACAATCTTCCCTTCCTTTGATTCCAATATTCGTCAATTCGTTTCATCCGGCAAAGAGGCATACCGCGATTTACAGACCCTATTCACTCTTGACCATAACAAAAGAGTCATCATTTCATGTCGTCCTTCCACCTTGCACTTCATAGGAACTTCAGCTGTTTTAACCATCATTGCCTTTTCTGTTTTGAGGGTATTGTTTGAATTGGTTTCTAGGTTTGCGTCATGGCGTCGAAATGCATCTACCTACAATAAGGGTATTATTATGGTGCGGAGAGACAGGAGTCTTGGTGGAAAAGAGGTGGTTGTTGGATTGAGTCCCCCCATTCACAGCACCACCTCTGCGCCGTCAATTAAGCGGTCTTTGAAGAATAATAATAAGGAAATTGTGTCTCAAAGGAAATTGCCCAAATGGTGGCCAACTATTAATAATCCCAATGCCAATGCTTTTGATATGGACCTAACTGAACAAGATGAATACAAGAGGGATGCTTACAGACTCGTTCGAGCAATTATCGACAGTAGAATGGCCGCAAAAGACATATCCGACCATGATATCATTCAATTACGTCAATTATGCAGAAATTCTGGTGTGCAAGTGTCTGTTGAACCTACAACTATTCGGGACTCCTTGTATCGAGCATCAGTTAATTTTGTTTTAGATGCTTGCAGCAGTGCACCAACTTACTCTACTTCAGTTCATATTAATGGCGAGGATTCTCAACAATTCCTTGCTGGGTTTGCTGAAAACATTGGCCTTGAAAATGTTCGTGCCGCAACAATTGTGTCTGCAGCTATAGCTGCCCGCACACGCTCTTGTCTTTTGCAGGCTTGGGCATTGGAAATGCAAGGCAAACATGTTGATGCTTTAGGAGAACTGTCAAAGATATGCCTTCTTCTACGGATATTTCCTCCCGAGGAATCTTCGCCTGAAATGGAGATGGTTAGTCGGGGTCTAGAGAAACACTTGAAACTAGAACAAAGAAAGCACCTTATGTTTCTCTTTGGTAAAGTTTGCAGTGAGGACAGTCACGGGATTGCAAGAGAAGCTCTTGGTTTGACGCATTCTCAAAATTATTGTACCGGTCAACTTGAAGACAACATAGTACCATGA

Protein sequence

>Msa1371060

MFSSSFTLPFPQPCLSRLVSASSFVRRSRRRTKRHNKLKLSDPTTTTTITTFSEPKLETVIDLTIFPSFDSNIRQFVSSGKEAYRDLQTLFTLDHNKRVIISCRPSTLHFIGTSAVLTIIAFSVLRVLFELVSRFASWRRNASTYNKGIIMVRRDRSLGGKEVVVGLSPPIHSTTSAPSIKRSLKNNNKEIVSQRKLPKWWPTINNPNANAFDMDLTEQDEYKRDAYRLVRAIIDSRMAAKDISDHDIIQLRQLCRNSGVQVSVEPTTIRDSLYRASVNFVLDACSSAPTYSTSVHINGEDSQQFLAGFAENIGLENVRAATIVSAAIAARTRSCLLQAWALEMQGKHVDALGELSKICLLLRIFPPEESSPEMEMVSRGLEKHLKLEQRKHLMFLFGKVCSEDSHGIAREALGLTHSQNYCTGQLEDNIVP*