AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0330770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0330770 MtrunA17_Chr2g0306771 89.267 382 13 2 1 354 1 382 0.0 686
Msa0330770 MtrunA17_Chr4g0008411 37.234 188 92 6 183 345 11 197 2.87e-21 91.7
Msa0330770 MtrunA17_Chr4g0008421 34.694 196 97 8 182 349 97 289 1.40e-19 87.8
Msa0330770 MtrunA17_Chr7g0266341 32.323 198 102 6 180 349 99 292 1.43e-18 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0330770 AT5G20140.1 64.957 351 94 3 33 354 28 378 1.88e-166 469
Msa0330770 AT5G20140.2 64.095 337 92 3 33 340 28 364 5.09e-156 444
Msa0330770 AT2G37970.1 33.971 209 94 8 182 349 41 246 3.39e-18 83.2
Msa0330770 AT3G10130.1 30.392 204 100 7 180 350 112 306 4.22e-16 78.6

Find 96 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTCGCAGGTATATATT+TGG 0.154800 2_4:+45787003 Msa0330770:intron
AAATCATCATGCTTAGTAAT+TGG 0.154857 2_4:-45784923 None:intergenic
CCTCAATTTCCCAGGACTTT+TGG 0.196703 2_4:+45786258 Msa0330770:intron
CAGACCATCTTTAATGATAT+TGG 0.210028 2_4:-45787557 None:intergenic
CTACAACTTGCACCACTTTC+CGG 0.210772 2_4:+45784657 Msa0330770:CDS
TTCAACTAAGCTCAGATTAA+TGG 0.251072 2_4:-45784771 None:intergenic
AAGCTAACTGTTTCTTGATT+AGG 0.251086 2_4:-45787442 None:intergenic
ACAAATGGAGACAAGCTATC+TGG 0.265343 2_4:+45786870 Msa0330770:CDS
AAAAGACATATTAGCAAATA+AGG 0.276348 2_4:+45788850 Msa0330770:three_prime_UTR
TGTCTGATGGAAGAACTATT+TGG 0.281044 2_4:-45787110 None:intergenic
ACTGTTTCTTGATTAGGATT+TGG 0.296904 2_4:-45787436 None:intergenic
AAACCAGAATTGGTCTTTAC+AGG 0.303338 2_4:+45785960 Msa0330770:CDS
GTTCCTGTAAAGACCAATTC+TGG 0.315384 2_4:-45785963 None:intergenic
CTTTACAGGAACATCTGTTA+TGG 0.331343 2_4:+45785974 Msa0330770:CDS
TCCTCACCTCTTTGATGATA+AGG 0.332232 2_4:+45784856 Msa0330770:CDS
ATGGGTGTTAACCCAGAAAA+TGG 0.339771 2_4:+45785993 Msa0330770:CDS
CCTCACCTCTTTGATGATAA+GGG 0.345368 2_4:+45784857 Msa0330770:CDS
GATTTACAAGACACCAGATT+TGG 0.350699 2_4:+45786456 Msa0330770:CDS
AACTATTTGGATTGAGACTT+TGG 0.355211 2_4:-45787097 None:intergenic
CAGATACAAGGAGTGATGTT+TGG 0.371055 2_4:+45788805 Msa0330770:three_prime_UTR
TACGGTGTCTCCGTGGTGGC+TGG 0.372285 2_4:-45784727 None:intergenic
AACAGAGAATGACATCAATA+TGG 0.376578 2_4:-45788741 None:intergenic
CTCTTTGTTTCTTTGTCTGA+TGG 0.379732 2_4:-45787123 None:intergenic
TATTTGGGTGATTCCAAATC+TGG 0.380267 2_4:-45786469 None:intergenic
AAATAAGGTGCATGGTCATT+AGG 0.381234 2_4:+45788865 Msa0330770:three_prime_UTR
CATCTTGTAGTTATTTCATA+AGG 0.386402 2_4:-45785903 None:intergenic
ACCGGCTTTAATGATGTTGC+TGG 0.397252 2_4:+45786897 Msa0330770:CDS
TTTACAGGAACATCTGTTAT+GGG 0.408859 2_4:+45785975 Msa0330770:CDS
AGAGGAATGAAGTGCTCATC+TGG 0.414180 2_4:+45788599 Msa0330770:intron
TGACGGCGGAGGTTGGTTGC+CGG 0.419491 2_4:-45784676 None:intergenic
GCTGCAGTAATAAAGTTTAG+TGG 0.421311 2_4:+45787487 Msa0330770:CDS
CTGGCTAGATGACTTCTCAT+TGG 0.421534 2_4:+45788618 Msa0330770:CDS
AGGAAATGGGTGGGAGAGAA+TGG 0.421650 2_4:-45784636 None:intergenic
AATCATCATGCTTAGTAATT+GGG 0.426244 2_4:-45784922 None:intergenic
TTTATTGGAAGTATTCAAAC+AGG 0.429041 2_4:+45786319 Msa0330770:CDS
CGCTCCAATATCATTAAAGA+TGG 0.429781 2_4:+45787553 Msa0330770:CDS
GCTTCCATGGAAACCAGAAT+TGG 0.431262 2_4:+45785950 Msa0330770:CDS
TCGAACATGGTCCTTCATAA+TGG 0.440473 2_4:+45787624 Msa0330770:CDS
GTGGTGCAAGTTGTAGGAAA+TGG 0.442861 2_4:-45784650 None:intergenic
GTTAGCTTGAGAAAGGTAGA+AGG 0.445389 2_4:+45787457 Msa0330770:CDS
CGGAAAGTGGTGCAAGTTGT+AGG 0.450152 2_4:-45784656 None:intergenic
CTTGCCCGTTACAATGATCC+AGG 0.455438 2_4:+45787601 Msa0330770:CDS
CCAAATATCAAATATTAAAA+CGG 0.467136 2_4:+45786485 Msa0330770:CDS
TGAAATTCATGCTGCTTCCA+TGG 0.477688 2_4:+45785937 Msa0330770:CDS
TGGATGTTGACGGCGGAGGT+TGG 0.479429 2_4:-45784683 None:intergenic
CAAATGGAGACAAGCTATCT+GGG 0.479821 2_4:+45786871 Msa0330770:CDS
TTCGCGAACAATATCCTCCA+TGG 0.485927 2_4:-45787515 None:intergenic
AAGACCAATTCTGGTTTCCA+TGG 0.488831 2_4:-45785954 None:intergenic
GGAGAGAATGGAAGTGGCCA+TGG 0.497885 2_4:-45784624 None:intergenic
GGAGGATATTGTTCGCGAAA+AGG 0.499867 2_4:+45787519 Msa0330770:CDS
TGGTGCAAGTTGTAGGAAAT+GGG 0.500255 2_4:-45784649 None:intergenic
TTCGTAGTAGTAGAAACAAA+TGG 0.502411 2_4:+45786855 Msa0330770:CDS
TTCGCAGCATACCATTATGA+AGG 0.511503 2_4:-45787635 None:intergenic
GACAAGCTATCTGGGAATAC+CGG 0.516068 2_4:+45786879 Msa0330770:CDS
TCGATGGCTTGAGTGAATAC+AGG 0.518542 2_4:-45787063 None:intergenic
AGAAACAGTTAGCTTGAGAA+AGG 0.518821 2_4:+45787450 Msa0330770:CDS
ATAAATTATCTTCAGATACA+AGG 0.522440 2_4:+45788793 Msa0330770:three_prime_UTR
TTTGTTTCTACTACTACGAA+TGG 0.522785 2_4:-45786852 None:intergenic
TCGACCTGGATCATTGTAAC+GGG 0.527359 2_4:-45787605 None:intergenic
GGAGGTTGGTTGCCGGAAAG+TGG 0.535672 2_4:-45784669 None:intergenic
GAAGAAGTGGAGAGTAGTTG+TGG 0.543985 2_4:-45784703 None:intergenic
AGAGTAGTTGTGGATGTTGA+CGG 0.545889 2_4:-45784693 None:intergenic
TCGCGAACAATATCCTCCAT+GGG 0.547839 2_4:-45787514 None:intergenic
CATCGGTATCTTCTCTGCTG+TGG 0.557509 2_4:-45787034 None:intergenic
CGTGGTGGCTGGAGAAGAAG+TGG 0.560248 2_4:-45784716 None:intergenic
CCCAGCAACATCATTAAAGC+CGG 0.567439 2_4:-45786898 None:intergenic
CTTATGAAATAACTACAAGA+TGG 0.569482 2_4:+45785904 Msa0330770:CDS
TGGGTGGGAGAGAATGGAAG+TGG 0.573642 2_4:-45784630 None:intergenic
CCGGCTTTAATGATGTTGCT+GGG 0.579992 2_4:+45786898 Msa0330770:CDS
TTCGACCTGGATCATTGTAA+CGG 0.580924 2_4:-45787606 None:intergenic
AAAGTTTAGTGGAAAACCCA+TGG 0.583126 2_4:+45787498 Msa0330770:CDS
ACAATGATCCAGGTCGAACA+TGG 0.586299 2_4:+45787611 Msa0330770:CDS
AAAACGGACAGCAAATTATG+AGG 0.586779 2_4:+45786501 Msa0330770:CDS
CATTAACAACGAAGTACTCA+TGG 0.588482 2_4:+45788646 Msa0330770:three_prime_UTR
GTTGTGGATGTTGACGGCGG+AGG 0.589317 2_4:-45784687 None:intergenic
CACTTCTTCTCCAGCCACCA+CGG 0.591236 2_4:+45784717 Msa0330770:CDS
ATGAAGGACCATGTTCGACC+TGG 0.591864 2_4:-45787619 None:intergenic
TGCAAGTTGTAGGAAATGGG+TGG 0.597054 2_4:-45784646 None:intergenic
AATAGTGTACACTGTACAGT+AGG 0.597176 2_4:+45788914 Msa0330770:three_prime_UTR
TTTGGACAAGTCAATATCGA+TGG 0.598178 2_4:-45787079 None:intergenic
ACTAAGCATGATGATTTGAG+TGG 0.598452 2_4:+45784929 Msa0330770:CDS
GCAAGTTGTAGGAAATGGGT+GGG 0.599564 2_4:-45784645 None:intergenic
GCAAGCAAACAACCAGGCTG+AGG 0.606063 2_4:-45787583 None:intergenic
CATCAGACAAAGAAACAAAG+AGG 0.609686 2_4:+45787124 Msa0330770:CDS
ATATATGACATGTTCATACA+AGG 0.612377 2_4:+45788967 Msa0330770:three_prime_UTR
GATGGTCTGAAACCTCAGCC+TGG 0.615097 2_4:+45787571 Msa0330770:CDS
CAGCATGAATTTCATAACCA+TGG 0.617626 2_4:-45785928 None:intergenic
CAATACCCTTATCATCAAAG+AGG 0.620697 2_4:-45784862 None:intergenic
ATATTAGCAAATAAGGTGCA+TGG 0.624531 2_4:+45788857 Msa0330770:three_prime_UTR
GTGAATACAGGAGTAGTCAT+CGG 0.628384 2_4:-45787051 None:intergenic
CCCTTATCATCAAAGAGGTG+AGG 0.636487 2_4:-45784857 None:intergenic
AGCTTGAGAAAGGTAGAAGG+AGG 0.657758 2_4:+45787460 Msa0330770:CDS
TAACGGGCAAGCAAACAACC+AGG 0.667765 2_4:-45787589 None:intergenic
AATAACTACAAGATGGACCA+TGG 0.682550 2_4:+45785911 Msa0330770:CDS
GTAGTTGTGGATGTTGACGG+CGG 0.738735 2_4:-45784690 None:intergenic
GTTTAGTGGAAAACCCATGG+AGG 0.746638 2_4:+45787501 Msa0330770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAATGTGATTTTTTTTA+CGG - chr2_4:45784748-45784767 None:intergenic 10.0%
!! TAAAAAAAATCACATTAAAT+GGG + chr2_4:45784748-45784767 Msa0330770:CDS 10.0%
!!! AATAAATAAATTAGTTTACA+TGG + chr2_4:45785172-45785191 Msa0330770:intron 10.0%
!!! TTGATTTTATAAAATATCAT+AGG - chr2_4:45785482-45785501 None:intergenic 10.0%
!!! ATATTTTATAAAATCAACTT+TGG + chr2_4:45785485-45785504 Msa0330770:intron 10.0%
!!! ATTTTAATTTCAATTAATCT+TGG - chr2_4:45788058-45788077 None:intergenic 10.0%
!!! TTTTACCATATAAAATAATT+AGG - chr2_4:45788096-45788115 None:intergenic 10.0%
!!! TAATTATTTTATATGGTAAA+AGG + chr2_4:45788095-45788114 Msa0330770:intron 10.0%
!!! AATTATTTTATATGGTAAAA+GGG + chr2_4:45788096-45788115 Msa0330770:intron 10.0%
!! GTAAAAAAAATCACATTAAA+TGG + chr2_4:45784747-45784766 Msa0330770:CDS 15.0%
!!! TTAAGTCATATTCATTTTTT+CGG + chr2_4:45785526-45785545 Msa0330770:intron 15.0%
!!! TTATCTATGGTTTTAAATTT+TGG + chr2_4:45786062-45786081 Msa0330770:intron 15.0%
!!! CGTTTTAATATTTGATATTT+GGG - chr2_4:45786487-45786506 None:intergenic 15.0%
!! CCAAATATCAAATATTAAAA+CGG + chr2_4:45786485-45786504 Msa0330770:CDS 15.0%
!!! ACTAACCTAATTATTTTATA+TGG + chr2_4:45788088-45788107 Msa0330770:intron 15.0%
!! ATTACATTAAAGAATTAAGA+GGG - chr2_4:45788314-45788333 None:intergenic 15.0%
!!! TTTTCAGCTTATTTGTATAT+AGG + chr2_4:45785132-45785151 Msa0330770:intron 20.0%
!! TTTCAGCTTATTTGTATATA+GGG + chr2_4:45785133-45785152 Msa0330770:intron 20.0%
!!! AAGCTATTTTTGTAACAAAA+TGG - chr2_4:45785294-45785313 None:intergenic 20.0%
!! AATGTAATAATCACATATGT+TGG - chr2_4:45785652-45785671 None:intergenic 20.0%
!! AAAATATTGTATGAAGATCA+AGG - chr2_4:45785681-45785700 None:intergenic 20.0%
!!! TGATCTTCATACAATATTTT+AGG + chr2_4:45785681-45785700 Msa0330770:intron 20.0%
!! AACAAGACATAAAAAAGTTA+AGG - chr2_4:45785847-45785866 None:intergenic 20.0%
!!! AATGACTATTTTTCATTTGA+AGG + chr2_4:45786296-45786315 Msa0330770:CDS 20.0%
!!! TTTTTCATTTGAAGGTTTAT+TGG + chr2_4:45786304-45786323 Msa0330770:CDS 20.0%
!!! CCGTTTTAATATTTGATATT+TGG - chr2_4:45786488-45786507 None:intergenic 20.0%
!! ATATCAAAAGTTAACACAAA+AGG + chr2_4:45786687-45786706 Msa0330770:intron 20.0%
!!! TGAATTCATTGTTTTTTTGA+TGG + chr2_4:45786806-45786825 Msa0330770:intron 20.0%
!! AATAACAAAAAGAAATTGCT+CGG + chr2_4:45787710-45787729 Msa0330770:intron 20.0%
!! CATTACATTAAAGAATTAAG+AGG - chr2_4:45788315-45788334 None:intergenic 20.0%
!!! TATGGATTTTCTTAGAATTT+GGG + chr2_4:45788340-45788359 Msa0330770:intron 20.0%
!! CTTAAAATTACTATATAAGC+TGG - chr2_4:45788417-45788436 None:intergenic 20.0%
!!! CAGCTTATATAGTAATTTTA+AGG + chr2_4:45788415-45788434 Msa0330770:intron 20.0%
!! ATAAATTATCTTCAGATACA+AGG + chr2_4:45788793-45788812 Msa0330770:three_prime_UTR 20.0%
!! AAAAGACATATTAGCAAATA+AGG + chr2_4:45788850-45788869 Msa0330770:three_prime_UTR 20.0%
!!! TTTTTTTACAATTTGATGAG+TGG - chr2_4:45788893-45788912 None:intergenic 20.0%
! AATCATCATGCTTAGTAATT+GGG - chr2_4:45784925-45784944 None:intergenic 25.0%
! AAATCATCATGCTTAGTAAT+TGG - chr2_4:45784926-45784945 None:intergenic 25.0%
! TAACTTTATAGAGACAACTT+AGG + chr2_4:45785096-45785115 Msa0330770:intron 25.0%
! ATACAAATAAGCTGAAAACA+TGG - chr2_4:45785130-45785149 None:intergenic 25.0%
! TTAACCACTTCTAGTATTAA+CGG - chr2_4:45785335-45785354 None:intergenic 25.0%
!!! TTATGTCTTGTTTGTTCAAT+TGG + chr2_4:45785855-45785874 Msa0330770:intron 25.0%
!! CATCTTGTAGTTATTTCATA+AGG - chr2_4:45785906-45785925 None:intergenic 25.0%
! CTTATGAAATAACTACAAGA+TGG + chr2_4:45785904-45785923 Msa0330770:CDS 25.0%
!!! TTTTAAATTTTGGTTGCAGT+CGG + chr2_4:45786072-45786091 Msa0330770:intron 25.0%
!! ATTGGTGTTTATAAATGAAG+TGG + chr2_4:45786207-45786226 Msa0330770:intron 25.0%
! TAAATGAAGTGGTATTATGT+CGG + chr2_4:45786218-45786237 Msa0330770:intron 25.0%
!!! TTTATTGGAAGTATTCAAAC+AGG + chr2_4:45786319-45786338 Msa0330770:CDS 25.0%
! AAGAAGAAAAAAAATGCCAA+AGG - chr2_4:45786373-45786392 None:intergenic 25.0%
!! GTTAACTTTTGATATGTTTG+TGG - chr2_4:45786682-45786701 None:intergenic 25.0%
!!! TTGAAGTAGTTTTATAATGG+TGG - chr2_4:45786732-45786751 None:intergenic 25.0%
!!! GACTTGAAGTAGTTTTATAA+TGG - chr2_4:45786735-45786754 None:intergenic 25.0%
! TACTTCAAGTCAAAAACAAA+AGG + chr2_4:45786744-45786763 Msa0330770:intron 25.0%
!!! TGTTTTTTTGATGGTATAAC+AGG + chr2_4:45786815-45786834 Msa0330770:intron 25.0%
! TTCTTTACTAAGCATATGTT+TGG - chr2_4:45787335-45787354 None:intergenic 25.0%
! AACATATGCTTAGTAAAGAA+AGG + chr2_4:45787335-45787354 Msa0330770:intron 25.0%
! CATGCATATTCAAAATCAAA+TGG - chr2_4:45787677-45787696 None:intergenic 25.0%
!!! CATTTGATTTTGAATATGCA+TGG + chr2_4:45787675-45787694 Msa0330770:intron 25.0%
!!! GAGCAATTTCTTTTTGTTAT+TGG - chr2_4:45787711-45787730 None:intergenic 25.0%
! GTAGAAAAACTAAACCATAA+TGG - chr2_4:45788252-45788271 None:intergenic 25.0%
!! CAAATTCTAAGAAAATCCAT+AGG - chr2_4:45788341-45788360 None:intergenic 25.0%
!! CTATGGATTTTCTTAGAATT+TGG + chr2_4:45788339-45788358 Msa0330770:intron 25.0%
!!! ATTTTCTTAGAATTTGGGTT+GGG + chr2_4:45788345-45788364 Msa0330770:intron 25.0%
!!! AGATGAAATTTTTTACTGAC+TGG - chr2_4:45788690-45788709 None:intergenic 25.0%
!! TTTTACATGCCTACTATTTT+TGG - chr2_4:45788833-45788852 None:intergenic 25.0%
! ATATATGACATGTTCATACA+AGG + chr2_4:45788967-45788986 Msa0330770:three_prime_UTR 25.0%
TTCAACTAAGCTCAGATTAA+TGG - chr2_4:45784774-45784793 None:intergenic 30.0%
CGATAAAAAAAACCGTAAGA+TGG - chr2_4:45785041-45785060 None:intergenic 30.0%
ATTTGTATATAGGGTCTGTT+TGG + chr2_4:45785142-45785161 Msa0330770:intron 30.0%
! GTTGAACTAGCTTATAAACT+AGG - chr2_4:45785214-45785233 None:intergenic 30.0%
! GTAATGATTTGCACACATAA+CGG - chr2_4:45785236-45785255 None:intergenic 30.0%
TAACCACTTCTAGTATTAAC+GGG - chr2_4:45785334-45785353 None:intergenic 30.0%
!! TAATAGGCTGAAACTTGTTT+TGG - chr2_4:45785371-45785390 None:intergenic 30.0%
GTTACTATGAGATATAGACA+CGG - chr2_4:45785736-45785755 None:intergenic 30.0%
TTTACAGGAACATCTGTTAT+GGG + chr2_4:45785975-45785994 Msa0330770:CDS 30.0%
!!! TACAAAACTTGCCATTTTCT+GGG - chr2_4:45786007-45786026 None:intergenic 30.0%
!!! TTTAAATTTTGGTTGCAGTC+GGG + chr2_4:45786073-45786092 Msa0330770:intron 30.0%
! ATTGATAACACTAGTCATTG+AGG - chr2_4:45786189-45786208 None:intergenic 30.0%
CAATGACTAGTGTTATCAAT+TGG + chr2_4:45786189-45786208 Msa0330770:intron 30.0%
ACAAAAGGATGCATCTTATA+TGG + chr2_4:45786759-45786778 Msa0330770:intron 30.0%
!! TTTGTTTCTACTACTACGAA+TGG - chr2_4:45786855-45786874 None:intergenic 30.0%
TTCGTAGTAGTAGAAACAAA+TGG + chr2_4:45786855-45786874 Msa0330770:CDS 30.0%
TGTTAAAAATCTTCATTCGC+AGG + chr2_4:45786992-45787011 Msa0330770:intron 30.0%
TTCATTCGCAGGTATATATT+TGG + chr2_4:45787003-45787022 Msa0330770:intron 30.0%
AACTATTTGGATTGAGACTT+TGG - chr2_4:45787100-45787119 None:intergenic 30.0%
! AGTAAAGAAAGGAAGTTTTG+TGG + chr2_4:45787346-45787365 Msa0330770:intron 30.0%
! ACTGTTTCTTGATTAGGATT+TGG - chr2_4:45787439-45787458 None:intergenic 30.0%
! AAGCTAACTGTTTCTTGATT+AGG - chr2_4:45787445-45787464 None:intergenic 30.0%
CAGACCATCTTTAATGATAT+TGG - chr2_4:45787560-45787579 None:intergenic 30.0%
TCTAGCAATAAGTCAAGATA+TGG + chr2_4:45787791-45787810 Msa0330770:intron 30.0%
CTAGCAATAAGTCAAGATAT+GGG + chr2_4:45787792-45787811 Msa0330770:intron 30.0%
CTTGTGTAAAAAACAGTGTA+AGG - chr2_4:45787857-45787876 None:intergenic 30.0%
! TTGTCTAGAATTGTTAGGTT+AGG - chr2_4:45788172-45788191 None:intergenic 30.0%
! ATGGATTTGAAGTTCCATTA+TGG + chr2_4:45788235-45788254 Msa0330770:intron 30.0%
! GATTTTCTTAGAATTTGGGT+TGG + chr2_4:45788344-45788363 Msa0330770:intron 30.0%
TAACTCAGCTCCTATAAAAT+CGG + chr2_4:45788370-45788389 Msa0330770:intron 30.0%
AGCAGACAAATATCAAATTG+AGG - chr2_4:45788533-45788552 None:intergenic 30.0%
GACATCAATATGGAAAAACT+TGG - chr2_4:45788734-45788753 None:intergenic 30.0%
AACAGAGAATGACATCAATA+TGG - chr2_4:45788744-45788763 None:intergenic 30.0%
ATATTAGCAAATAAGGTGCA+TGG + chr2_4:45788857-45788876 Msa0330770:three_prime_UTR 30.0%
CAATACCCTTATCATCAAAG+AGG - chr2_4:45784865-45784884 None:intergenic 35.0%
ACTAAGCATGATGATTTGAG+TGG + chr2_4:45784929-45784948 Msa0330770:CDS 35.0%
GTTTCTCTCTTTCCATCTTA+CGG + chr2_4:45785026-45785045 Msa0330770:intron 35.0%
TAACCCGTTAATACTAGAAG+TGG + chr2_4:45785328-45785347 Msa0330770:intron 35.0%
CTTCATATCAATGACATGTC+CGG + chr2_4:45785583-45785602 Msa0330770:intron 35.0%
TGGTAGAACAAACGCTTATT+TGG + chr2_4:45785788-45785807 Msa0330770:intron 35.0%
AATAACTACAAGATGGACCA+TGG + chr2_4:45785911-45785930 Msa0330770:CDS 35.0%
CAGCATGAATTTCATAACCA+TGG - chr2_4:45785931-45785950 None:intergenic 35.0%
!! AAACCAGAATTGGTCTTTAC+AGG + chr2_4:45785960-45785979 Msa0330770:CDS 35.0%
CTTTACAGGAACATCTGTTA+TGG + chr2_4:45785974-45785993 Msa0330770:CDS 35.0%
!!! CTACAAAACTTGCCATTTTC+TGG - chr2_4:45786008-45786027 None:intergenic 35.0%
ATGCAACCTTAATTGCAGTA+GGG + chr2_4:45786140-45786159 Msa0330770:intron 35.0%
TTACTCTTGATGTATGCCTT+TGG + chr2_4:45786354-45786373 Msa0330770:intron 35.0%
! TAACAACTCACAGCGAATTT+TGG - chr2_4:45786407-45786426 None:intergenic 35.0%
! GATTTGACATTTTGCAGTTG+AGG + chr2_4:45786434-45786453 Msa0330770:intron 35.0%
GATTTACAAGACACCAGATT+TGG + chr2_4:45786456-45786475 Msa0330770:CDS 35.0%
TATTTGGGTGATTCCAAATC+TGG - chr2_4:45786472-45786491 None:intergenic 35.0%
AAAACGGACAGCAAATTATG+AGG + chr2_4:45786501-45786520 Msa0330770:CDS 35.0%
CACTATGTTCATGAATGAGA+AGG - chr2_4:45786531-45786550 None:intergenic 35.0%
GCATGAATGCTCATATCAAA+AGG + chr2_4:45786615-45786634 Msa0330770:intron 35.0%
CAAAAGGTAAACTCTACCTT+TGG + chr2_4:45786631-45786650 Msa0330770:intron 35.0%
! TTGTGGTGCAGTTTTCATAA+AGG - chr2_4:45786665-45786684 None:intergenic 35.0%
AATTTGTCGCTCTCTATTTC+AGG + chr2_4:45786958-45786977 Msa0330770:intron 35.0%
TTTGGACAAGTCAATATCGA+TGG - chr2_4:45787082-45787101 None:intergenic 35.0%
TGTCTGATGGAAGAACTATT+TGG - chr2_4:45787113-45787132 None:intergenic 35.0%
! CTCTTTGTTTCTTTGTCTGA+TGG - chr2_4:45787126-45787145 None:intergenic 35.0%
CATCAGACAAAGAAACAAAG+AGG + chr2_4:45787124-45787143 Msa0330770:CDS 35.0%
TTTGTTCCAAGAGATACATG+TGG + chr2_4:45787187-45787206 Msa0330770:intron 35.0%
CACAAACATGGAAAACAAAC+AGG - chr2_4:45787220-45787239 None:intergenic 35.0%
!! ACCCTTTTATTTGTCTGAAG+CGG - chr2_4:45787271-45787290 None:intergenic 35.0%
!! AATAAAAGGGTTAGTTGCCT+CGG + chr2_4:45787280-45787299 Msa0330770:intron 35.0%
! AGAAACAGTTAGCTTGAGAA+AGG + chr2_4:45787450-45787469 Msa0330770:CDS 35.0%
GCTGCAGTAATAAAGTTTAG+TGG + chr2_4:45787487-45787506 Msa0330770:CDS 35.0%
AAAGTTTAGTGGAAAACCCA+TGG + chr2_4:45787498-45787517 Msa0330770:CDS 35.0%
CGCTCCAATATCATTAAAGA+TGG + chr2_4:45787553-45787572 Msa0330770:CDS 35.0%
TCAAATGGCAACAATCAAGA+AGG - chr2_4:45787662-45787681 None:intergenic 35.0%
AATAAGTCAAGATATGGGTC+CGG + chr2_4:45787797-45787816 Msa0330770:intron 35.0%
! ATGAATGCTAGTCTCTAATG+TGG - chr2_4:45787951-45787970 None:intergenic 35.0%
GAAGTGATTCCTTGATAGAT+GGG + chr2_4:45788011-45788030 Msa0330770:intron 35.0%
TTAGGTTAGGTTCAACAAGT+AGG - chr2_4:45788159-45788178 None:intergenic 35.0%
! CCATCTTGTCTAGAATTGTT+AGG - chr2_4:45788177-45788196 None:intergenic 35.0%
CCTAACAATTCTAGACAAGA+TGG + chr2_4:45788174-45788193 Msa0330770:intron 35.0%
CATGCATGTAAGAAGTAGTT+TGG - chr2_4:45788208-45788227 None:intergenic 35.0%
CTTTAATGTAATGCTGCCTA+TGG + chr2_4:45788322-45788341 Msa0330770:intron 35.0%
! GATTTTATAGGAGCTGAGTT+AGG - chr2_4:45788371-45788390 None:intergenic 35.0%
TAAATATCCATATCTCCCGT+GGG - chr2_4:45788493-45788512 None:intergenic 35.0%
ATAAATATCCATATCTCCCG+TGG - chr2_4:45788494-45788513 None:intergenic 35.0%
CATTTGCTTCATTTGTCTTG+TGG + chr2_4:45788563-45788582 Msa0330770:intron 35.0%
TGTGGTTTATGACATTGAAG+AGG + chr2_4:45788581-45788600 Msa0330770:intron 35.0%
! CATTAACAACGAAGTACTCA+TGG + chr2_4:45788646-45788665 Msa0330770:three_prime_UTR 35.0%
!! TATGGAAAAACTTGGTGTGT+GGG - chr2_4:45788726-45788745 None:intergenic 35.0%
!! ATATGGAAAAACTTGGTGTG+TGG - chr2_4:45788727-45788746 None:intergenic 35.0%
! TGTTTGGAGCCAAAAATAGT+AGG + chr2_4:45788821-45788840 Msa0330770:three_prime_UTR 35.0%
AAATAAGGTGCATGGTCATT+AGG + chr2_4:45788865-45788884 Msa0330770:three_prime_UTR 35.0%
AATAGTGTACACTGTACAGT+AGG + chr2_4:45788914-45788933 Msa0330770:three_prime_UTR 35.0%
TGGTGCAAGTTGTAGGAAAT+GGG - chr2_4:45784652-45784671 None:intergenic 40.0%
AGAGTAGTTGTGGATGTTGA+CGG - chr2_4:45784696-45784715 None:intergenic 40.0%
!!! TTTTTTTTACGGTGTCTCCG+TGG - chr2_4:45784737-45784756 None:intergenic 40.0%
! TCCTCACCTCTTTGATGATA+AGG + chr2_4:45784856-45784875 Msa0330770:CDS 40.0%
! CCTCACCTCTTTGATGATAA+GGG + chr2_4:45784857-45784876 Msa0330770:CDS 40.0%
ATGGAAAGAGAGAAACAGAC+CGG - chr2_4:45785022-45785041 None:intergenic 40.0%
TTCAGCCTATTAACGTGTGT+TGG + chr2_4:45785379-45785398 Msa0330770:intron 40.0%
ACTGTCCAACACACGTTAAT+AGG - chr2_4:45785387-45785406 None:intergenic 40.0%
TATTAACGTGTGTTGGACAG+TGG + chr2_4:45785386-45785405 Msa0330770:intron 40.0%
ATTAACGTGTGTTGGACAGT+GGG + chr2_4:45785387-45785406 Msa0330770:intron 40.0%
!! GACTTATGATCTCTGAAGCA+CGG - chr2_4:45785435-45785454 None:intergenic 40.0%
! CTATGTGTCACTGTCGTATT+CGG + chr2_4:45785707-45785726 Msa0330770:intron 40.0%
! CTGATTGAGTTGCTATAGAC+AGG + chr2_4:45785879-45785898 Msa0330770:intron 40.0%
! TGAAATTCATGCTGCTTCCA+TGG + chr2_4:45785937-45785956 Msa0330770:CDS 40.0%
!! AAGACCAATTCTGGTTTCCA+TGG - chr2_4:45785957-45785976 None:intergenic 40.0%
GTTCCTGTAAAGACCAATTC+TGG - chr2_4:45785966-45785985 None:intergenic 40.0%
ATGGGTGTTAACCCAGAAAA+TGG + chr2_4:45785993-45786012 Msa0330770:CDS 40.0%
GATAGTTGGAACTTACCACA+TGG - chr2_4:45786031-45786050 None:intergenic 40.0%
AAGTTCCAACTATCCAGTAC+TGG + chr2_4:45786037-45786056 Msa0330770:intron 40.0%
! TAACACCAGTACTGGATAGT+TGG - chr2_4:45786045-45786064 None:intergenic 40.0%
!! TCCAGTACTGGTGTTATCTA+TGG + chr2_4:45786049-45786068 Msa0330770:intron 40.0%
ACCATAGATAACACCAGTAC+TGG - chr2_4:45786053-45786072 None:intergenic 40.0%
GATGCAACCTTAATTGCAGT+AGG + chr2_4:45786139-45786158 Msa0330770:intron 40.0%
ATCTGACCCTACTGCAATTA+AGG - chr2_4:45786149-45786168 None:intergenic 40.0%
TTCGTATTCCTCAATTTCCC+AGG + chr2_4:45786250-45786269 Msa0330770:intron 40.0%
! CTCAATTTCCCAGGACTTTT+GGG + chr2_4:45786259-45786278 Msa0330770:intron 40.0%
! CATAAAGGCACAATCACCAA+AGG - chr2_4:45786650-45786669 None:intergenic 40.0%
ACAAATGGAGACAAGCTATC+TGG + chr2_4:45786870-45786889 Msa0330770:CDS 40.0%
CAAATGGAGACAAGCTATCT+GGG + chr2_4:45786871-45786890 Msa0330770:CDS 40.0%
CTTTAATGATGTTGCTGGGT+AGG + chr2_4:45786902-45786921 Msa0330770:intron 40.0%
GTGAATACAGGAGTAGTCAT+CGG - chr2_4:45787054-45787073 None:intergenic 40.0%
TCCCGCTTCAGACAAATAAA+AGG + chr2_4:45787266-45787285 Msa0330770:intron 40.0%
!! CCCTTTTATTTGTCTGAAGC+GGG - chr2_4:45787270-45787289 None:intergenic 40.0%
CCCGCTTCAGACAAATAAAA+GGG + chr2_4:45787267-45787286 Msa0330770:intron 40.0%
!! ATAAAAGGGTTAGTTGCCTC+GGG + chr2_4:45787281-45787300 Msa0330770:intron 40.0%
! GTTAGCTTGAGAAAGGTAGA+AGG + chr2_4:45787457-45787476 Msa0330770:CDS 40.0%
TTCGACCTGGATCATTGTAA+CGG - chr2_4:45787609-45787628 None:intergenic 40.0%
TCGAACATGGTCCTTCATAA+TGG + chr2_4:45787624-45787643 Msa0330770:CDS 40.0%
TTCGCAGCATACCATTATGA+AGG - chr2_4:45787638-45787657 None:intergenic 40.0%
!!! GCCAGAGCCTTGTTTTTTAA+GGG + chr2_4:45787732-45787751 Msa0330770:intron 40.0%
!!! CCAGAGCCTTGTTTTTTAAG+GGG + chr2_4:45787733-45787752 Msa0330770:intron 40.0%
GTCACTCCCCTTAAAAAACA+AGG - chr2_4:45787742-45787761 None:intergenic 40.0%
ATAAGTCAAGATATGGGTCC+GGG + chr2_4:45787798-45787817 Msa0330770:intron 40.0%
CGTACAATACACCAATTGGT+GGG - chr2_4:45787831-45787850 None:intergenic 40.0%
GTTGTTGTCAAGTGACTGAA+AGG - chr2_4:45787908-45787927 None:intergenic 40.0%
CGAAGTGATTCCTTGATAGA+TGG + chr2_4:45788010-45788029 Msa0330770:intron 40.0%
ACAAGTGGTCTGTCTTATCT+TGG - chr2_4:45788129-45788148 None:intergenic 40.0%
GGAACTTCAAATCCATCAAG+AGG - chr2_4:45788231-45788250 None:intergenic 40.0%
!! GCTCTACAAGCCGATTTTAT+AGG - chr2_4:45788383-45788402 None:intergenic 40.0%
CCGTGGGACAATTATAATTG+GGG - chr2_4:45788477-45788496 None:intergenic 40.0%
CCCCAATTATAATTGTCCCA+CGG + chr2_4:45788474-45788493 Msa0330770:intron 40.0%
CCCGTGGGACAATTATAATT+GGG - chr2_4:45788478-45788497 None:intergenic 40.0%
CCCAATTATAATTGTCCCAC+GGG + chr2_4:45788475-45788494 Msa0330770:intron 40.0%
TCCCGTGGGACAATTATAAT+TGG - chr2_4:45788479-45788498 None:intergenic 40.0%
CAGATACAAGGAGTGATGTT+TGG + chr2_4:45788805-45788824 Msa0330770:three_prime_UTR 40.0%
GCAAGTTGTAGGAAATGGGT+GGG - chr2_4:45784648-45784667 None:intergenic 45.0%
TGCAAGTTGTAGGAAATGGG+TGG - chr2_4:45784649-45784668 None:intergenic 45.0%
GTGGTGCAAGTTGTAGGAAA+TGG - chr2_4:45784653-45784672 None:intergenic 45.0%
CTACAACTTGCACCACTTTC+CGG + chr2_4:45784657-45784676 Msa0330770:CDS 45.0%
GAAGAAGTGGAGAGTAGTTG+TGG - chr2_4:45784706-45784725 None:intergenic 45.0%
CCCTTATCATCAAAGAGGTG+AGG - chr2_4:45784860-45784879 None:intergenic 45.0%
TGGGACACACTTAATGCTAG+TGG + chr2_4:45785406-45785425 Msa0330770:intron 45.0%
! ATGAAGTGCTTGTGCTGCAT+AGG - chr2_4:45785569-45785588 None:intergenic 45.0%
GCTTCCATGGAAACCAGAAT+TGG + chr2_4:45785950-45785969 Msa0330770:CDS 45.0%
!! TGGCAAGTTTTGTAGCCATG+TGG + chr2_4:45786013-45786032 Msa0330770:CDS 45.0%
CCAAAAGTCCTGGGAAATTG+AGG - chr2_4:45786261-45786280 None:intergenic 45.0%
! CCTCAATTTCCCAGGACTTT+TGG + chr2_4:45786258-45786277 Msa0330770:intron 45.0%
TAGCGAATCCCAAAAGTCCT+GGG - chr2_4:45786270-45786289 None:intergenic 45.0%
TTAGCGAATCCCAAAAGTCC+TGG - chr2_4:45786271-45786290 None:intergenic 45.0%
GACAAGCTATCTGGGAATAC+CGG + chr2_4:45786879-45786898 Msa0330770:CDS 45.0%
! ACCGGCTTTAATGATGTTGC+TGG + chr2_4:45786897-45786916 Msa0330770:CDS 45.0%
CCCAGCAACATCATTAAAGC+CGG - chr2_4:45786901-45786920 None:intergenic 45.0%
! CCGGCTTTAATGATGTTGCT+GGG + chr2_4:45786898-45786917 Msa0330770:CDS 45.0%
TCGATGGCTTGAGTGAATAC+AGG - chr2_4:45787066-45787085 None:intergenic 45.0%
CCTAAGCCACATGTATCTCT+TGG - chr2_4:45787196-45787215 None:intergenic 45.0%
CCAAGAGATACATGTGGCTT+AGG + chr2_4:45787193-45787212 Msa0330770:intron 45.0%
AAGCGGGAAATCAGAGAGAT+AGG - chr2_4:45787254-45787273 None:intergenic 45.0%
CTATTCATTCTTGCATCCCG+AGG - chr2_4:45787300-45787319 None:intergenic 45.0%
AGCTTGAGAAAGGTAGAAGG+AGG + chr2_4:45787460-45787479 Msa0330770:CDS 45.0%
GTTTAGTGGAAAACCCATGG+AGG + chr2_4:45787501-45787520 Msa0330770:CDS 45.0%
TCGCGAACAATATCCTCCAT+GGG - chr2_4:45787517-45787536 None:intergenic 45.0%
TTCGCGAACAATATCCTCCA+TGG - chr2_4:45787518-45787537 None:intergenic 45.0%
GGAGGATATTGTTCGCGAAA+AGG + chr2_4:45787519-45787538 Msa0330770:CDS 45.0%
TCGACCTGGATCATTGTAAC+GGG - chr2_4:45787608-45787627 None:intergenic 45.0%
ACAATGATCCAGGTCGAACA+TGG + chr2_4:45787611-45787630 Msa0330770:CDS 45.0%
!!! GGCCAGAGCCTTGTTTTTTA+AGG + chr2_4:45787731-45787750 Msa0330770:intron 45.0%
CCCCTTAAAAAACAAGGCTC+TGG - chr2_4:45787736-45787755 None:intergenic 45.0%
GCGTACAATACACCAATTGG+TGG - chr2_4:45787832-45787851 None:intergenic 45.0%
GCTGCGTACAATACACCAAT+TGG - chr2_4:45787835-45787854 None:intergenic 45.0%
ACAACTTTACCGTTACGCCA+AGG + chr2_4:45787923-45787942 Msa0330770:intron 45.0%
TAGTCTCTAATGTGGAGCCT+TGG - chr2_4:45787943-45787962 None:intergenic 45.0%
CTGCTCTAACCCATCTATCA+AGG - chr2_4:45788023-45788042 None:intergenic 45.0%
CAAGTAGGACTGATCACAAG+TGG - chr2_4:45788144-45788163 None:intergenic 45.0%
CTTACATGCATGCCTCTTGA+TGG + chr2_4:45788216-45788235 Msa0330770:intron 45.0%
!! TAAAATCGGCTTGTAGAGCG+AGG + chr2_4:45788384-45788403 Msa0330770:intron 45.0%
!! AAAATCGGCTTGTAGAGCGA+GGG + chr2_4:45788385-45788404 Msa0330770:intron 45.0%
TAATTGTCCCACGGGAGATA+TGG + chr2_4:45788483-45788502 Msa0330770:intron 45.0%
! AGAGGAATGAAGTGCTCATC+TGG + chr2_4:45788599-45788618 Msa0330770:intron 45.0%
CTGGCTAGATGACTTCTCAT+TGG + chr2_4:45788618-45788637 Msa0330770:CDS 45.0%
!!! ATTTATTGTATAATTTTTTT+TGG + chr2_4:45785768-45785787 Msa0330770:intron 5.0%
AGGAAATGGGTGGGAGAGAA+TGG - chr2_4:45784639-45784658 None:intergenic 50.0%
CGGAAAGTGGTGCAAGTTGT+AGG - chr2_4:45784659-45784678 None:intergenic 50.0%
GTAGTTGTGGATGTTGACGG+CGG - chr2_4:45784693-45784712 None:intergenic 50.0%
! TTTTTACGGTGTCTCCGTGG+TGG - chr2_4:45784734-45784753 None:intergenic 50.0%
AGCCTCAGTTTCAGCTGCAT+TGG + chr2_4:45784990-45785009 Msa0330770:intron 50.0%
GCCTCAGTTTCAGCTGCATT+GGG + chr2_4:45784991-45785010 Msa0330770:intron 50.0%
TCAGCTGCATTGGGCTAAAC+CGG + chr2_4:45785000-45785019 Msa0330770:intron 50.0%
CATCGGTATCTTCTCTGCTG+TGG - chr2_4:45787037-45787056 None:intergenic 50.0%
GGGAAATCAGAGAGATAGGC+AGG - chr2_4:45787250-45787269 None:intergenic 50.0%
! TAACGGGCAAGCAAACAACC+AGG - chr2_4:45787592-45787611 None:intergenic 50.0%
CTTGCCCGTTACAATGATCC+AGG + chr2_4:45787601-45787620 Msa0330770:CDS 50.0%
ATGAAGGACCATGTTCGACC+TGG - chr2_4:45787622-45787641 None:intergenic 50.0%
TCAAGATATGGGTCCGGGAA+AGG + chr2_4:45787803-45787822 Msa0330770:intron 50.0%
CAAGATATGGGTCCGGGAAA+GGG + chr2_4:45787804-45787823 Msa0330770:intron 50.0%
AATGTGGAGCCTTGGCGTAA+CGG - chr2_4:45787935-45787954 None:intergenic 50.0%
TGGGTGGGAGAGAATGGAAG+TGG - chr2_4:45784633-45784652 None:intergenic 55.0%
CACTTCTTCTCCAGCCACCA+CGG + chr2_4:45784717-45784736 Msa0330770:CDS 55.0%
GCCCAATGCAGCTGAAACTG+AGG - chr2_4:45784995-45785014 None:intergenic 55.0%
CAGAGAGATAGGCAGGTGCA+CGG - chr2_4:45787243-45787262 None:intergenic 55.0%
! GATGGTCTGAAACCTCAGCC+TGG + chr2_4:45787571-45787590 Msa0330770:CDS 55.0%
GCAAGCAAACAACCAGGCTG+AGG - chr2_4:45787586-45787605 None:intergenic 55.0%
CAATTGGTGGGACCCTTTCC+CGG - chr2_4:45787819-45787838 None:intergenic 55.0%
! GGAGGTTGGTTGCCGGAAAG+TGG - chr2_4:45784672-45784691 None:intergenic 60.0%
TGGATGTTGACGGCGGAGGT+TGG - chr2_4:45784686-45784705 None:intergenic 60.0%
GTTGTGGATGTTGACGGCGG+AGG - chr2_4:45784690-45784709 None:intergenic 60.0%
CGTGGTGGCTGGAGAAGAAG+TGG - chr2_4:45784719-45784738 None:intergenic 60.0%
CATGTCCGGTGTACGACACG+TGG + chr2_4:45785597-45785616 Msa0330770:intron 60.0%
CACGTCCACGTGTCGTACAC+CGG - chr2_4:45785605-45785624 None:intergenic 60.0%
GCAGGTGCACGGCACAAACA+TGG - chr2_4:45787232-45787251 None:intergenic 60.0%
CGGGAAAGGGTCCCACCAAT+TGG + chr2_4:45787817-45787836 Msa0330770:intron 60.0%
! TGACGGCGGAGGTTGGTTGC+CGG - chr2_4:45784679-45784698 None:intergenic 65.0%
TACGGTGTCTCCGTGGTGGC+TGG - chr2_4:45784730-45784749 None:intergenic 65.0%
CGGTGTACGACACGTGGACG+TGG + chr2_4:45785603-45785622 Msa0330770:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 45784626 45789024 45784626 ID=Msa0330770;Name=Msa0330770
chr2_4 mRNA 45784626 45789024 45784626 ID=Msa0330770-mRNA-1;Parent=Msa0330770;Name=Msa0330770-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.75|0.66|1|0.75|0.66|9|379|354
chr2_4 exon 45784626 45784787 45784626 ID=Msa0330770-mRNA-1:exon:13842;Parent=Msa0330770-mRNA-1
chr2_4 exon 45784797 45784950 45784797 ID=Msa0330770-mRNA-1:exon:13843;Parent=Msa0330770-mRNA-1
chr2_4 exon 45785901 45786034 45785901 ID=Msa0330770-mRNA-1:exon:13844;Parent=Msa0330770-mRNA-1
chr2_4 exon 45786272 45786340 45786272 ID=Msa0330770-mRNA-1:exon:13845;Parent=Msa0330770-mRNA-1
chr2_4 exon 45786451 45786522 45786451 ID=Msa0330770-mRNA-1:exon:13846;Parent=Msa0330770-mRNA-1
chr2_4 exon 45786837 45786919 45786837 ID=Msa0330770-mRNA-1:exon:13847;Parent=Msa0330770-mRNA-1
chr2_4 exon 45787014 45787145 45787014 ID=Msa0330770-mRNA-1:exon:13848;Parent=Msa0330770-mRNA-1
chr2_4 exon 45787432 45787645 45787432 ID=Msa0330770-mRNA-1:exon:13849;Parent=Msa0330770-mRNA-1
chr2_4 exon 45788601 45789024 45788601 ID=Msa0330770-mRNA-1:exon:13850;Parent=Msa0330770-mRNA-1
chr2_4 CDS 45784626 45784787 45784626 ID=Msa0330770-mRNA-1:cds;Parent=Msa0330770-mRNA-1
chr2_4 CDS 45784797 45784950 45784797 ID=Msa0330770-mRNA-1:cds;Parent=Msa0330770-mRNA-1
chr2_4 CDS 45785901 45786034 45785901 ID=Msa0330770-mRNA-1:cds;Parent=Msa0330770-mRNA-1
chr2_4 CDS 45786272 45786340 45786272 ID=Msa0330770-mRNA-1:cds;Parent=Msa0330770-mRNA-1
chr2_4 CDS 45786451 45786522 45786451 ID=Msa0330770-mRNA-1:cds;Parent=Msa0330770-mRNA-1
chr2_4 CDS 45786837 45786919 45786837 ID=Msa0330770-mRNA-1:cds;Parent=Msa0330770-mRNA-1
chr2_4 CDS 45787014 45787145 45787014 ID=Msa0330770-mRNA-1:cds;Parent=Msa0330770-mRNA-1
chr2_4 CDS 45787432 45787645 45787432 ID=Msa0330770-mRNA-1:cds;Parent=Msa0330770-mRNA-1
chr2_4 CDS 45788601 45788645 45788601 ID=Msa0330770-mRNA-1:cds;Parent=Msa0330770-mRNA-1
chr2_4 three_prime_UTR 45788646 45789024 45788646 ID=Msa0330770-mRNA-1:three_prime_utr;Parent=Msa0330770-mRNA-1
Gene Sequence

>Msa0330770

ATGGCCACTTCCATTCTCTCCCACCCATTTCCTACAACTTGCACCACTTTCCGGCAACCAACCTCCGCCGTCAACATCCACAACTACTCTCCACTTCTTCTCCAGCCACCACGGAGACACCGTAAAAAAAATCACATTAAATGGGCCATTAATCTGAGCTTAAGTACACAAAAATCGAGTTTTGATTTGCAGCAACTTGTTGCGTTTCTTTACGACGATCTTCCTCACCTCTTTGATGATAAGGGTATTGATAAAAATGCTTATGATGAACGTGTCTTCTTTCGTGACCCAATTACTAAGCATGATGATTTGAGTGGACCTTATGAAATAACTACAAGATGGACCATGGTTATGAAATTCATGCTGCTTCCATGGAAACCAGAATTGGTCTTTACAGGAACATCTGTTATGGGTGTTAACCCAGAAAATGGCAAGTTTTGTAGCCATGTGGACTTTTGGGATTCGCTAAAGAAAAATGACTATTTTTCATTTGAAGGTTTATTGGAAGTATTCAAACAGTTGAGGATTTACAAGACACCAGATTTGGAATCACCCAAATATCAAATATTAAAACGGACAGCAAATTATGAGGTTAGACAGTATGATCCATTCGTAGTAGTAGAAACAAATGGAGACAAGCTATCTGGGAATACCGGCTTTAATGATGTTGCTGGGTATATATTTGGAAAGAATTCCACAGCAGAGAAGATACCGATGACTACTCCTGTATTCACTCAAGCCATCGATATTGACTTGTCCAAAGTCTCAATCCAAATAGTTCTTCCATCAGACAAAGAAACAAAGAGTTTACCAAATCCTAATCAAGAAACAGTTAGCTTGAGAAAGGTAGAAGGAGGCATTGCTGCAGTAATAAAGTTTAGTGGAAAACCCATGGAGGATATTGTTCGCGAAAAGGAGAAAATTTTACGCTCCAATATCATTAAAGATGGTCTGAAACCTCAGCCTGGTTGTTTGCTTGCCCGTTACAATGATCCAGGTCGAACATGGTCCTTCATAATGAGGAATGAAGTGCTCATCTGGCTAGATGACTTCTCATTGGATTAG

Protein sequence

>Msa0330770

MATSILSHPFPTTCTTFRQPTSAVNIHNYSPLLLQPPRRHRKKNHIKWAINLSLSTQKSSFDLQQLVAFLYDDLPHLFDDKGIDKNAYDERVFFRDPITKHDDLSGPYEITTRWTMVMKFMLLPWKPELVFTGTSVMGVNPENGKFCSHVDFWDSLKKNDYFSFEGLLEVFKQLRIYKTPDLESPKYQILKRTANYEVRQYDPFVVVETNGDKLSGNTGFNDVAGYIFGKNSTAEKIPMTTPVFTQAIDIDLSKVSIQIVLPSDKETKSLPNPNQETVSLRKVEGGIAAVIKFSGKPMEDIVREKEKILRSNIIKDGLKPQPGCLLARYNDPGRTWSFIMRNEVLIWLDDFSLD*