Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150210 | KEH22977.1 | 92.453 | 265 | 20 | 0 | 1 | 265 | 1 | 265 | 0.0 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150210 | sp|Q9LHT0|TRNHF_ARATH | 57.812 | 256 | 104 | 1 | 10 | 265 | 4 | 255 | 3.40e-111 | 324 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150210 | A0A072U038 | 92.453 | 265 | 20 | 0 | 1 | 265 | 1 | 265 | 0.0 | 509 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1150210 | 0.805652 | 1.203571e-49 | -8.615850e-47 |
| Msa0006110 | Msa1150210 | 0.802585 | 5.230800e-49 | -8.615850e-47 |
| Msa0011170 | Msa1150210 | 0.801682 | 8.024016e-49 | -8.615850e-47 |
| Msa0014710 | Msa1150210 | 0.815750 | 7.879774e-52 | -8.615850e-47 |
| Msa0017510 | Msa1150210 | 0.805764 | 1.140427e-49 | -8.615850e-47 |
| Msa0021510 | Msa1150210 | 0.817517 | 3.165423e-52 | -8.615850e-47 |
| Msa0078900 | Msa1150210 | 0.808629 | 2.819239e-50 | -8.615850e-47 |
| Msa0079380 | Msa1150210 | 0.804192 | 2.430426e-49 | -8.615850e-47 |
| Msa0084380 | Msa1150210 | 0.809662 | 1.694082e-50 | -8.615850e-47 |
| Msa0114060 | Msa1150210 | 0.802249 | 6.136984e-49 | -8.615850e-47 |
| Msa0116770 | Msa1150210 | 0.828505 | 8.662079e-55 | -8.615850e-47 |
| Msa0641670 | Msa1150210 | 0.800572 | 1.353673e-48 | -8.615850e-47 |
| Msa0663380 | Msa1150210 | 0.817613 | 3.010687e-52 | -8.615850e-47 |
| Msa0679290 | Msa1150210 | -0.802386 | 5.750854e-49 | -8.615850e-47 |
| Msa0688480 | Msa1150210 | 0.806008 | 1.013235e-49 | -8.615850e-47 |
| Msa0701010 | Msa1150210 | 0.805924 | 1.055265e-49 | -8.615850e-47 |
| Msa0731940 | Msa1150210 | 0.812030 | 5.204683e-51 | -8.615850e-47 |
| Msa0735170 | Msa1150210 | 0.819454 | 1.151438e-52 | -8.615850e-47 |
| Msa0745790 | Msa1150210 | 0.816704 | 4.820964e-52 | -8.615850e-47 |
| Msa0755180 | Msa1150210 | 0.821195 | 4.593022e-53 | -8.615850e-47 |
| Msa0756460 | Msa1150210 | 0.800744 | 1.248296e-48 | -8.615850e-47 |
| Msa0766630 | Msa1150210 | 0.808190 | 3.498765e-50 | -8.615850e-47 |
| Msa0768290 | Msa1150210 | 0.809857 | 1.537508e-50 | -8.615850e-47 |
| Msa0777230 | Msa1150210 | 0.804813 | 1.803852e-49 | -8.615850e-47 |
| Msa0136070 | Msa1150210 | 0.800527 | 1.382377e-48 | -8.615850e-47 |
| Msa0140390 | Msa1150210 | 0.801570 | 8.460548e-49 | -8.615850e-47 |
| Msa0157290 | Msa1150210 | 0.806463 | 8.127355e-50 | -8.615850e-47 |
| Msa0165210 | Msa1150210 | 0.822166 | 2.739471e-53 | -8.615850e-47 |
| Msa0165220 | Msa1150210 | 0.817702 | 2.875896e-52 | -8.615850e-47 |
| Msa0171540 | Msa1150210 | 0.819287 | 1.257408e-52 | -8.615850e-47 |
| Msa0196500 | Msa1150210 | -0.810163 | 1.321272e-50 | -8.615850e-47 |
| Msa0212990 | Msa1150210 | 0.817554 | 3.104794e-52 | -8.615850e-47 |
| Msa0215320 | Msa1150210 | -0.803194 | 3.916525e-49 | -8.615850e-47 |
| Msa0220740 | Msa1150210 | 0.804664 | 1.937955e-49 | -8.615850e-47 |
| Msa0222890 | Msa1150210 | 0.802805 | 4.711783e-49 | -8.615850e-47 |
| Msa0388950 | Msa1150210 | 0.816611 | 5.058152e-52 | -8.615850e-47 |
| Msa0402290 | Msa1150210 | 0.811730 | 6.049516e-51 | -8.615850e-47 |
| Msa0424320 | Msa1150210 | 0.816993 | 4.151542e-52 | -8.615850e-47 |
| Msa0464680 | Msa1150210 | 0.802142 | 6.456248e-49 | -8.615850e-47 |
| Msa0998690 | Msa1150210 | 0.836539 | 8.817564e-57 | -8.615850e-47 |
| Msa1000860 | Msa1150210 | 0.800050 | 1.728376e-48 | -8.615850e-47 |
| Msa1000890 | Msa1150210 | 0.813514 | 2.463535e-51 | -8.615850e-47 |
| Msa1000900 | Msa1150210 | 0.814468 | 1.517214e-51 | -8.615850e-47 |
| Msa1003620 | Msa1150210 | 0.808891 | 2.478393e-50 | -8.615850e-47 |
| Msa1014540 | Msa1150210 | 0.825923 | 3.597562e-54 | -8.615850e-47 |
| Msa1015490 | Msa1150210 | 0.803733 | 3.028060e-49 | -8.615850e-47 |
| Msa1022630 | Msa1150210 | 0.803393 | 3.561823e-49 | -8.615850e-47 |
| Msa1036610 | Msa1150210 | 0.800943 | 1.136841e-48 | -8.615850e-47 |
| Msa1075540 | Msa1150210 | 0.810016 | 1.421217e-50 | -8.615850e-47 |
| Msa1075650 | Msa1150210 | 0.825307 | 5.035161e-54 | -8.615850e-47 |
| Msa1082500 | Msa1150210 | 0.811946 | 5.427828e-51 | -8.615850e-47 |
| Msa1104090 | Msa1150210 | 0.822489 | 2.305584e-53 | -8.615850e-47 |
| Msa1104370 | Msa1150210 | 0.807456 | 5.010600e-50 | -8.615850e-47 |
| Msa0275000 | Msa1150210 | 0.807130 | 5.873152e-50 | -8.615850e-47 |
| Msa0285450 | Msa1150210 | 0.807887 | 4.058942e-50 | -8.615850e-47 |
| Msa0288100 | Msa1150210 | 0.822742 | 2.012926e-53 | -8.615850e-47 |
| Msa0321310 | Msa1150210 | 0.818377 | 2.023274e-52 | -8.615850e-47 |
| Msa0330340 | Msa1150210 | 0.818243 | 2.169532e-52 | -8.615850e-47 |
| Msa0337620 | Msa1150210 | 0.805027 | 1.627821e-49 | -8.615850e-47 |
| Msa0351030 | Msa1150210 | 0.802213 | 6.242906e-49 | -8.615850e-47 |
| Msa0355220 | Msa1150210 | 0.801139 | 1.036790e-48 | -8.615850e-47 |
| Msa0363680 | Msa1150210 | 0.808289 | 3.332222e-50 | -8.615850e-47 |
| Msa1121480 | Msa1150210 | 0.804988 | 1.658597e-49 | -8.615850e-47 |
| Msa1121490 | Msa1150210 | 0.822541 | 2.241816e-53 | -8.615850e-47 |
| Msa1137570 | Msa1150210 | 0.823778 | 1.153265e-53 | -8.615850e-47 |
| Msa1150210 | Msa1162550 | -0.802003 | 6.893372e-49 | -8.615850e-47 |
| Msa1150210 | Msa1193290 | 0.801379 | 9.257080e-49 | -8.615850e-47 |
| Msa1150210 | Msa1238930 | 0.802600 | 5.194814e-49 | -8.615850e-47 |
| Msa1150210 | Msa1279910 | 0.801905 | 7.220304e-49 | -8.615850e-47 |
| Msa1150210 | Msa1284680 | 0.834187 | 3.464254e-56 | -8.615850e-47 |
| Msa1150210 | Msa1313140 | 0.813609 | 2.347033e-51 | -8.615850e-47 |
| Msa1150210 | Msa1353470 | 0.843800 | 1.121183e-58 | -8.615850e-47 |
| Msa1150210 | Msa1403480 | 0.811735 | 6.034426e-51 | -8.615850e-47 |
| Msa1150210 | Msa1410680 | 0.802565 | 5.282160e-49 | -8.615850e-47 |
| Msa1150210 | Msa1423350 | 0.810278 | 1.247905e-50 | -8.615850e-47 |
| Msa1150210 | Msa1423870 | 0.816169 | 6.350154e-52 | -8.615850e-47 |
| Msa1150210 | Msa1443060 | 0.805196 | 1.500019e-49 | -8.615850e-47 |
| Msa1150210 | Msa1466540 | 0.805866 | 1.085420e-49 | -8.615850e-47 |
| Msa0484780 | Msa1150210 | 0.801290 | 9.656906e-49 | -8.615850e-47 |
| Msa0512750 | Msa1150210 | 0.800031 | 1.743856e-48 | -8.615850e-47 |
| Msa0523940 | Msa1150210 | 0.814145 | 1.787840e-51 | -8.615850e-47 |
| Msa0529040 | Msa1150210 | 0.813204 | 2.881116e-51 | -8.615850e-47 |
| Msa0530400 | Msa1150210 | 0.803132 | 4.033221e-49 | -8.615850e-47 |
| Msa0542750 | Msa1150210 | 0.805924 | 1.055407e-49 | -8.615850e-47 |
| Msa0545700 | Msa1150210 | 0.803486 | 3.407210e-49 | -8.615850e-47 |
| Msa0562440 | Msa1150210 | 0.834002 | 3.854011e-56 | -8.615850e-47 |
| Msa0593650 | Msa1150210 | 0.819449 | 1.154632e-52 | -8.615850e-47 |
| Msa0598780 | Msa1150210 | 0.827389 | 1.607440e-54 | -8.615850e-47 |
| Msa0844240 | Msa1150210 | 0.804949 | 1.689545e-49 | -8.615850e-47 |
| Msa0849030 | Msa1150210 | 0.801133 | 1.039765e-48 | -8.615850e-47 |
| Msa0871270 | Msa1150210 | 0.805869 | 1.083808e-49 | -8.615850e-47 |
| Msa0880140 | Msa1150210 | 0.807856 | 4.119408e-50 | -8.615850e-47 |
| Msa0925250 | Msa1150210 | 0.805221 | 1.482190e-49 | -8.615850e-47 |
| Msa0925290 | Msa1150210 | 0.831518 | 1.595563e-55 | -8.615850e-47 |
| Msa0927380 | Msa1150210 | 0.825938 | 3.566590e-54 | -8.615850e-47 |
| Msa0933100 | Msa1150210 | 0.804556 | 2.040771e-49 | -8.615850e-47 |
| Msa0936300 | Msa1150210 | 0.806439 | 8.223221e-50 | -8.615850e-47 |
| Msa0938220 | Msa1150210 | 0.827383 | 1.612941e-54 | -8.615850e-47 |
| Msa0974070 | Msa1150210 | 0.809190 | 2.139202e-50 | -8.615850e-47 |
| Msa0974080 | Msa1150210 | 0.804042 | 2.611186e-49 | -8.615850e-47 |
| Msa0976670 | Msa1150210 | 0.820368 | 7.118564e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150210 | MtrunA17_Chr7g0239481 | 92.453 | 265 | 20 | 0 | 1 | 265 | 1 | 265 | 0.0 | 509 |
| Msa1150210 | MtrunA17_Chr7g0239491 | 76.426 | 263 | 61 | 1 | 1 | 263 | 1 | 262 | 7.15e-148 | 414 |
| Msa1150210 | MtrunA17_Chr7g0239511 | 75.940 | 266 | 63 | 1 | 1 | 265 | 1 | 266 | 5.17e-147 | 412 |
| Msa1150210 | MtrunA17_Chr7g0239501 | 75.188 | 266 | 65 | 1 | 1 | 265 | 1 | 266 | 1.31e-144 | 405 |
| Msa1150210 | MtrunA17_Chr7g0239451 | 73.384 | 263 | 69 | 1 | 1 | 262 | 1 | 263 | 1.21e-139 | 393 |
| Msa1150210 | MtrunA17_Chr3g0112151 | 59.245 | 265 | 104 | 1 | 1 | 265 | 72 | 332 | 1.54e-112 | 327 |
| Msa1150210 | MtrunA17_Chr3g0112271 | 58.661 | 254 | 101 | 1 | 12 | 265 | 14 | 263 | 2.12e-110 | 319 |
| Msa1150210 | MtrunA17_Chr3g0112261 | 57.034 | 263 | 109 | 1 | 3 | 265 | 7 | 265 | 1.16e-109 | 317 |
| Msa1150210 | MtrunA17_Chr3g0112171 | 60.159 | 251 | 96 | 1 | 15 | 265 | 15 | 261 | 1.90e-107 | 311 |
| Msa1150210 | MtrunA17_Chr4g0032141 | 56.693 | 254 | 106 | 1 | 10 | 263 | 51 | 300 | 3.42e-107 | 312 |
| Msa1150210 | MtrunA17_Chr7g0239461 | 57.955 | 264 | 60 | 3 | 1 | 263 | 1 | 214 | 6.12e-102 | 296 |
| Msa1150210 | MtrunA17_Chr3g0112141 | 58.233 | 249 | 100 | 1 | 15 | 263 | 17 | 261 | 1.12e-100 | 295 |
| Msa1150210 | MtrunA17_Chr4g0032181 | 53.219 | 233 | 105 | 1 | 31 | 263 | 17 | 245 | 1.82e-87 | 260 |
| Msa1150210 | MtrunA17_Chr4g0075531 | 33.200 | 250 | 158 | 5 | 15 | 263 | 7 | 248 | 9.64e-31 | 115 |
| Msa1150210 | MtrunA17_Chr7g0259531 | 31.783 | 258 | 166 | 5 | 11 | 263 | 7 | 259 | 2.09e-26 | 103 |
| Msa1150210 | MtrunA17_Chr3g0122901 | 28.958 | 259 | 163 | 6 | 15 | 265 | 75 | 320 | 3.47e-26 | 104 |
| Msa1150210 | MtrunA17_Chr7g0259521 | 31.783 | 258 | 162 | 7 | 15 | 265 | 6 | 256 | 5.40e-26 | 102 |
| Msa1150210 | MtrunA17_Chr4g0074511 | 30.769 | 260 | 164 | 7 | 15 | 265 | 40 | 292 | 2.42e-23 | 96.3 |
| Msa1150210 | MtrunA17_Chr8g0357481 | 28.244 | 262 | 169 | 5 | 15 | 265 | 14 | 267 | 3.53e-22 | 93.2 |
| Msa1150210 | MtrunA17_Chr0c30g0494101 | 31.034 | 261 | 160 | 9 | 15 | 265 | 40 | 290 | 1.15e-21 | 91.7 |
| Msa1150210 | MtrunA17_Chr3g0112321 | 45.631 | 103 | 36 | 3 | 147 | 246 | 2 | 87 | 3.78e-21 | 85.1 |
| Msa1150210 | MtrunA17_Chr4g0028911 | 28.958 | 259 | 171 | 7 | 15 | 265 | 11 | 264 | 5.58e-21 | 89.4 |
| Msa1150210 | MtrunA17_Chr4g0028921 | 28.958 | 259 | 171 | 7 | 15 | 265 | 11 | 264 | 6.64e-21 | 89.4 |
| Msa1150210 | MtrunA17_Chr7g0272961 | 28.409 | 264 | 164 | 8 | 15 | 265 | 40 | 291 | 1.31e-20 | 89.0 |
| Msa1150210 | MtrunA17_Chr1g0182511 | 29.885 | 261 | 162 | 6 | 15 | 264 | 14 | 264 | 2.49e-20 | 87.4 |
| Msa1150210 | MtrunA17_Chr4g0026001 | 32.157 | 255 | 160 | 7 | 15 | 265 | 14 | 259 | 7.23e-20 | 86.3 |
| Msa1150210 | MtrunA17_Chr4g0044131 | 30.315 | 254 | 163 | 7 | 15 | 262 | 8 | 253 | 1.17e-19 | 85.9 |
| Msa1150210 | MtrunA17_Chr1g0191751 | 27.481 | 262 | 169 | 8 | 15 | 265 | 101 | 352 | 3.30e-19 | 85.9 |
| Msa1150210 | MtrunA17_Chr7g0244061 | 27.682 | 289 | 179 | 8 | 1 | 263 | 9 | 293 | 5.56e-18 | 81.6 |
| Msa1150210 | MtrunA17_Chr4g0025971 | 30.315 | 254 | 162 | 8 | 15 | 263 | 14 | 257 | 1.11e-17 | 80.5 |
| Msa1150210 | MtrunA17_Chr4g0044111 | 30.469 | 256 | 162 | 8 | 15 | 263 | 13 | 259 | 2.36e-17 | 79.7 |
| Msa1150210 | MtrunA17_Chr4g0025981 | 30.952 | 252 | 161 | 7 | 16 | 263 | 42 | 284 | 2.74e-17 | 80.1 |
| Msa1150210 | MtrunA17_Chr7g0266981 | 30.469 | 256 | 162 | 8 | 15 | 263 | 13 | 259 | 3.09e-17 | 79.3 |
| Msa1150210 | MtrunA17_Chr6g0459301 | 30.469 | 256 | 164 | 8 | 15 | 263 | 14 | 262 | 5.64e-17 | 78.6 |
| Msa1150210 | MtrunA17_Chr7g0249571 | 27.861 | 201 | 139 | 4 | 7 | 202 | 30 | 229 | 1.61e-16 | 77.8 |
| Msa1150210 | MtrunA17_Chr6g0459261 | 28.369 | 282 | 174 | 10 | 1 | 263 | 1 | 273 | 1.65e-16 | 77.4 |
| Msa1150210 | MtrunA17_Chr7g0267011 | 29.167 | 192 | 129 | 5 | 15 | 203 | 8 | 195 | 2.04e-16 | 75.5 |
| Msa1150210 | MtrunA17_Chr4g0076931 | 28.643 | 199 | 138 | 3 | 18 | 213 | 9 | 206 | 6.92e-16 | 74.7 |
| Msa1150210 | MtrunA17_Chr7g0267001 | 29.365 | 252 | 150 | 7 | 15 | 262 | 8 | 235 | 3.47e-15 | 73.2 |
| Msa1150210 | MtrunA17_Chr6g0459331 | 29.921 | 254 | 168 | 7 | 15 | 263 | 13 | 261 | 3.67e-15 | 73.2 |
| Msa1150210 | MtrunA17_Chr7g0252031 | 26.172 | 256 | 178 | 4 | 15 | 263 | 35 | 286 | 8.98e-15 | 72.8 |
| Msa1150210 | MtrunA17_Chr7g0266891 | 28.906 | 256 | 166 | 8 | 15 | 263 | 7 | 253 | 1.11e-14 | 72.0 |
| Msa1150210 | MtrunA17_Chr3g0084871 | 31.559 | 263 | 157 | 8 | 15 | 263 | 16 | 269 | 1.60e-14 | 71.6 |
| Msa1150210 | MtrunA17_Chr6g0459281 | 27.953 | 254 | 175 | 6 | 15 | 264 | 13 | 262 | 1.78e-14 | 71.6 |
| Msa1150210 | MtrunA17_Chr6g0459271 | 29.688 | 256 | 166 | 8 | 15 | 263 | 13 | 261 | 5.69e-14 | 70.1 |
| Msa1150210 | MtrunA17_Chr7g0268591 | 29.183 | 257 | 168 | 7 | 15 | 263 | 33 | 283 | 1.19e-13 | 69.3 |
| Msa1150210 | MtrunA17_Chr4g0040371 | 27.132 | 258 | 173 | 5 | 15 | 263 | 19 | 270 | 4.09e-13 | 67.8 |
| Msa1150210 | MtrunA17_Chr8g0355281 | 29.018 | 224 | 146 | 8 | 15 | 228 | 69 | 289 | 3.93e-12 | 65.5 |
| Msa1150210 | MtrunA17_Chr3g0112161 | 57.143 | 56 | 23 | 1 | 123 | 177 | 1 | 56 | 1.84e-11 | 58.9 |
| Msa1150210 | MtrunA17_Chr8g0386201 | 29.661 | 236 | 138 | 11 | 14 | 233 | 44 | 267 | 6.89e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150210 | AT5G06060.1 | 57.812 | 256 | 104 | 1 | 10 | 265 | 4 | 255 | 3.46e-112 | 324 |
| Msa1150210 | AT2G29260.1 | 56.126 | 253 | 107 | 1 | 11 | 263 | 64 | 312 | 4.80e-106 | 310 |
| Msa1150210 | AT1G07440.1 | 56.420 | 257 | 107 | 2 | 9 | 265 | 6 | 257 | 4.53e-105 | 306 |
| Msa1150210 | AT2G29330.1 | 57.874 | 254 | 103 | 1 | 10 | 263 | 2 | 251 | 3.48e-103 | 301 |
| Msa1150210 | AT2G29360.1 | 55.639 | 266 | 113 | 2 | 1 | 265 | 1 | 262 | 4.59e-102 | 298 |
| Msa1150210 | AT2G29340.2 | 55.469 | 256 | 110 | 1 | 10 | 265 | 2 | 253 | 2.88e-101 | 296 |
| Msa1150210 | AT2G29340.1 | 55.906 | 254 | 108 | 1 | 10 | 263 | 2 | 251 | 4.78e-101 | 297 |
| Msa1150210 | AT2G29290.2 | 55.512 | 254 | 109 | 1 | 10 | 263 | 2 | 251 | 5.81e-100 | 293 |
| Msa1150210 | AT2G29150.1 | 57.371 | 251 | 102 | 2 | 12 | 262 | 13 | 258 | 6.90e-98 | 288 |
| Msa1150210 | AT2G29320.1 | 55.814 | 258 | 109 | 2 | 7 | 263 | 5 | 258 | 8.31e-98 | 288 |
| Msa1150210 | AT2G30670.1 | 53.906 | 256 | 114 | 1 | 10 | 265 | 2 | 253 | 9.96e-98 | 287 |
| Msa1150210 | AT2G29300.1 | 54.475 | 257 | 112 | 2 | 10 | 265 | 2 | 254 | 2.94e-97 | 286 |
| Msa1150210 | AT2G29350.1 | 55.512 | 254 | 108 | 1 | 9 | 262 | 9 | 257 | 3.29e-97 | 286 |
| Msa1150210 | AT2G29300.2 | 54.902 | 255 | 110 | 2 | 10 | 263 | 2 | 252 | 1.34e-96 | 285 |
| Msa1150210 | AT2G29310.1 | 54.724 | 254 | 111 | 1 | 10 | 263 | 2 | 251 | 1.84e-95 | 281 |
| Msa1150210 | AT1G07450.1 | 53.360 | 253 | 113 | 2 | 11 | 263 | 4 | 251 | 1.48e-91 | 271 |
| Msa1150210 | AT2G29370.1 | 52.756 | 254 | 116 | 1 | 12 | 265 | 13 | 262 | 6.82e-90 | 267 |
| Msa1150210 | AT2G29320.2 | 55.128 | 234 | 100 | 2 | 31 | 263 | 11 | 240 | 1.52e-86 | 258 |
| Msa1150210 | AT2G29290.1 | 53.219 | 233 | 105 | 1 | 31 | 263 | 6 | 234 | 4.87e-86 | 257 |
| Msa1150210 | AT2G29310.2 | 52.340 | 235 | 108 | 1 | 31 | 265 | 21 | 251 | 7.30e-82 | 247 |
| Msa1150210 | AT2G29350.3 | 53.812 | 223 | 98 | 1 | 40 | 262 | 2 | 219 | 9.18e-81 | 243 |
| Msa1150210 | AT2G29340.3 | 55.000 | 200 | 90 | 0 | 10 | 209 | 2 | 201 | 7.97e-79 | 237 |
| Msa1150210 | AT2G29340.4 | 55.000 | 200 | 90 | 0 | 10 | 209 | 2 | 201 | 7.97e-79 | 237 |
| Msa1150210 | AT2G29350.2 | 54.930 | 213 | 96 | 0 | 9 | 221 | 9 | 221 | 4.11e-78 | 236 |
| Msa1150210 | AT2G29320.3 | 55.665 | 203 | 89 | 1 | 7 | 208 | 5 | 207 | 5.20e-76 | 230 |
| Msa1150210 | AT2G29310.3 | 55.500 | 200 | 89 | 0 | 10 | 209 | 2 | 201 | 1.40e-75 | 229 |
| Msa1150210 | AT1G07440.2 | 58.537 | 164 | 68 | 0 | 9 | 172 | 6 | 169 | 4.38e-67 | 206 |
| Msa1150210 | AT2G29310.4 | 53.073 | 179 | 84 | 0 | 31 | 209 | 21 | 199 | 9.89e-62 | 193 |
| Msa1150210 | AT2G29170.1 | 60.784 | 102 | 39 | 1 | 1 | 101 | 1 | 102 | 6.15e-38 | 129 |
| Msa1150210 | AT3G03980.1 | 33.208 | 265 | 154 | 5 | 15 | 264 | 14 | 270 | 2.32e-31 | 117 |
| Msa1150210 | AT4G05530.1 | 32.400 | 250 | 160 | 5 | 15 | 263 | 9 | 250 | 4.91e-28 | 108 |
| Msa1150210 | AT4G13180.1 | 32.171 | 258 | 161 | 6 | 15 | 265 | 13 | 263 | 2.22e-27 | 106 |
| Msa1150210 | AT3G04000.1 | 31.061 | 264 | 164 | 4 | 15 | 265 | 14 | 272 | 8.47e-27 | 105 |
| Msa1150210 | AT5G18210.1 | 30.153 | 262 | 164 | 5 | 14 | 264 | 7 | 260 | 2.69e-26 | 103 |
| Msa1150210 | AT1G24360.1 | 31.373 | 255 | 158 | 8 | 15 | 263 | 74 | 317 | 2.85e-26 | 105 |
| Msa1150210 | AT3G05260.1 | 32.319 | 263 | 154 | 7 | 15 | 265 | 37 | 287 | 5.97e-26 | 103 |
| Msa1150210 | AT1G54870.2 | 29.615 | 260 | 166 | 7 | 15 | 265 | 84 | 335 | 3.08e-25 | 102 |
| Msa1150210 | AT1G54870.1 | 29.615 | 260 | 166 | 7 | 15 | 265 | 82 | 333 | 3.18e-25 | 102 |
| Msa1150210 | AT3G12800.1 | 28.077 | 260 | 173 | 4 | 15 | 265 | 10 | 264 | 5.94e-22 | 92.8 |
| Msa1150210 | AT5G18210.2 | 30.453 | 243 | 150 | 5 | 14 | 245 | 7 | 241 | 6.74e-22 | 92.4 |
| Msa1150210 | AT3G51680.1 | 29.391 | 279 | 177 | 7 | 1 | 263 | 20 | 294 | 2.99e-20 | 88.6 |
| Msa1150210 | AT3G03330.1 | 31.980 | 197 | 129 | 3 | 11 | 202 | 37 | 233 | 2.00e-19 | 86.7 |
| Msa1150210 | AT1G63380.1 | 25.926 | 270 | 190 | 7 | 3 | 265 | 5 | 271 | 8.43e-19 | 84.0 |
| Msa1150210 | AT3G55290.2 | 26.642 | 274 | 182 | 9 | 3 | 265 | 5 | 270 | 1.01e-18 | 84.0 |
| Msa1150210 | AT1G63380.3 | 25.735 | 272 | 192 | 7 | 1 | 265 | 1 | 269 | 1.26e-18 | 83.6 |
| Msa1150210 | AT3G55310.1 | 26.277 | 274 | 183 | 9 | 3 | 265 | 5 | 270 | 1.31e-18 | 83.6 |
| Msa1150210 | AT1G63380.4 | 25.969 | 258 | 181 | 7 | 15 | 265 | 19 | 273 | 2.10e-18 | 83.2 |
| Msa1150210 | AT1G63380.2 | 25.969 | 258 | 181 | 7 | 15 | 265 | 22 | 276 | 2.57e-18 | 82.8 |
| Msa1150210 | AT3G55290.1 | 26.568 | 271 | 180 | 9 | 6 | 265 | 9 | 271 | 3.78e-18 | 82.4 |
| Msa1150210 | AT1G62610.3 | 25.368 | 272 | 193 | 7 | 1 | 265 | 1 | 269 | 4.41e-18 | 82.0 |
| Msa1150210 | AT1G62610.4 | 25.581 | 258 | 182 | 7 | 15 | 265 | 19 | 273 | 7.60e-18 | 81.3 |
| Msa1150210 | AT1G62610.1 | 25.581 | 258 | 182 | 7 | 15 | 265 | 14 | 268 | 7.78e-18 | 81.3 |
| Msa1150210 | AT1G62610.2 | 25.581 | 258 | 182 | 7 | 15 | 265 | 13 | 267 | 7.83e-18 | 81.3 |
| Msa1150210 | AT3G47350.1 | 28.378 | 222 | 143 | 7 | 14 | 230 | 43 | 253 | 1.17e-17 | 81.3 |
| Msa1150210 | AT3G47350.2 | 28.378 | 222 | 143 | 7 | 14 | 230 | 43 | 253 | 1.39e-17 | 81.3 |
| Msa1150210 | AT5G50590.2 | 28.571 | 210 | 134 | 7 | 15 | 214 | 45 | 248 | 1.60e-17 | 80.1 |
| Msa1150210 | AT5G50690.2 | 28.571 | 210 | 134 | 7 | 15 | 214 | 45 | 248 | 1.60e-17 | 80.1 |
| Msa1150210 | AT3G26760.1 | 28.623 | 276 | 172 | 7 | 3 | 263 | 24 | 289 | 2.52e-17 | 80.1 |
| Msa1150210 | AT4G03140.1 | 29.412 | 255 | 170 | 8 | 15 | 263 | 78 | 328 | 1.01e-16 | 79.0 |
| Msa1150210 | AT5G50590.1 | 29.353 | 201 | 126 | 7 | 15 | 205 | 45 | 239 | 1.84e-16 | 77.8 |
| Msa1150210 | AT5G50690.1 | 29.353 | 201 | 126 | 7 | 15 | 205 | 45 | 239 | 1.84e-16 | 77.8 |
| Msa1150210 | AT3G46170.1 | 25.954 | 262 | 175 | 9 | 15 | 265 | 26 | 279 | 2.28e-16 | 77.4 |
| Msa1150210 | AT3G47360.1 | 30.729 | 192 | 122 | 6 | 18 | 204 | 48 | 233 | 1.26e-15 | 75.5 |
| Msa1150210 | AT1G10310.1 | 31.034 | 203 | 124 | 5 | 18 | 213 | 18 | 211 | 1.49e-15 | 74.3 |
| Msa1150210 | AT1G52340.1 | 30.534 | 262 | 164 | 7 | 15 | 263 | 18 | 274 | 3.50e-15 | 73.9 |
| Msa1150210 | AT3G06060.1 | 27.861 | 201 | 138 | 2 | 15 | 212 | 37 | 233 | 5.29e-15 | 73.9 |
| Msa1150210 | AT3G06060.2 | 27.861 | 201 | 138 | 2 | 15 | 212 | 54 | 250 | 6.82e-15 | 73.9 |
| Msa1150210 | AT2G17845.1 | 25.287 | 261 | 175 | 9 | 15 | 262 | 47 | 300 | 5.29e-14 | 70.9 |
| Msa1150210 | AT3G26770.1 | 27.799 | 259 | 170 | 6 | 15 | 263 | 41 | 292 | 1.07e-13 | 70.1 |
| Msa1150210 | AT5G04900.1 | 30.457 | 197 | 124 | 8 | 21 | 207 | 83 | 276 | 2.26e-13 | 69.3 |
| Msa1150210 | AT3G42960.1 | 28.627 | 255 | 166 | 8 | 18 | 262 | 11 | 259 | 6.83e-12 | 64.7 |
| Msa1150210 | AT2G47130.1 | 28.458 | 253 | 168 | 7 | 15 | 262 | 6 | 250 | 1.14e-11 | 63.5 |
| Msa1150210 | AT3G03350.2 | 30.719 | 153 | 99 | 2 | 50 | 202 | 207 | 352 | 1.62e-11 | 64.3 |
| Msa1150210 | AT2G47140.1 | 28.000 | 250 | 174 | 6 | 15 | 262 | 6 | 251 | 6.13e-11 | 61.6 |
Find 51 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAATATATGTATTAATT+TGG | 0.126868 | 7_4:+33241121 | Msa1150210:three_prime_UTR |
| GTGGAAGAATTAGCGGAATT+TGG | 0.152775 | 7_4:+33237293 | Msa1150210:CDS |
| TATGTATTAATTTGGTTTCA+TGG | 0.255724 | 7_4:+33241129 | Msa1150210:three_prime_UTR |
| AGCTGTTAATACTGACCTTT+TGG | 0.274343 | 7_4:+33240101 | Msa1150210:CDS |
| TGGAAGAATTAGCGGAATTT+GGG | 0.300694 | 7_4:+33237294 | Msa1150210:CDS |
| ACTGTTGCTTCAATCTTTCA+TGG | 0.302197 | 7_4:+33237452 | Msa1150210:CDS |
| ATAAGAAAACGTACCTTTAG+AGG | 0.313209 | 7_4:-33239892 | None:intergenic |
| CTTCTAAAAGAATCTGGATA+TGG | 0.338906 | 7_4:+33239804 | Msa1150210:CDS |
| GGGAAGACAGCTCTTGTAAC+TGG | 0.346440 | 7_4:+33237142 | Msa1150210:CDS |
| TACCCACTTCTAAAAGAATC+TGG | 0.386925 | 7_4:+33239798 | Msa1150210:CDS |
| AGATGATATTGACAAATGTT+TGG | 0.387565 | 7_4:+33237346 | Msa1150210:CDS |
| CATTGTGGTTATTATATCTT+CGG | 0.388606 | 7_4:-33239733 | None:intergenic |
| CGAGCAAATGTTGTGGCACC+TGG | 0.414641 | 7_4:+33240078 | Msa1150210:CDS |
| GTGTTCATATCTTCTGTTGG+AGG | 0.416698 | 7_4:+33239834 | Msa1150210:CDS |
| TTGACAAATGTTTGGAAGAG+TGG | 0.419955 | 7_4:+33237354 | Msa1150210:CDS |
| GGTTCTCCAACACGACCAAC+AGG | 0.476329 | 7_4:-33240965 | None:intergenic |
| TCTATCTATGCAGCCTCTAA+AGG | 0.479369 | 7_4:+33239879 | Msa1150210:CDS |
| TTACAAGAGCTGTCTTCCCT+TGG | 0.482994 | 7_4:-33237138 | None:intergenic |
| ACTGGAGGAACTCGAGGCAT+AGG | 0.491585 | 7_4:+33237160 | Msa1150210:CDS |
| CGCAATTGTGGAAGAATTAG+CGG | 0.506940 | 7_4:+33237286 | Msa1150210:CDS |
| GAAGATATAATAACCACAAT+GGG | 0.510670 | 7_4:+33239735 | Msa1150210:CDS |
| GGTATGCTAGTTGACATAGA+TGG | 0.515344 | 7_4:-33239779 | None:intergenic |
| TGAAATTCAAAGATCAAAGA+TGG | 0.517953 | 7_4:+33237110 | Msa1150210:CDS |
| AGGTCAGTATTAACAGCTCC+AGG | 0.518179 | 7_4:-33240096 | None:intergenic |
| CCAGTGACATATGAAGCAGC+TGG | 0.520246 | 7_4:-33241025 | None:intergenic |
| AGTGCACCTGTTGGTCGTGT+TGG | 0.526453 | 7_4:+33240959 | Msa1150210:CDS |
| CTCAAAATTTGTGCCCATTG+TGG | 0.527526 | 7_4:-33239748 | None:intergenic |
| ACCAATGCTGAGATGTCCTT+AGG | 0.528827 | 7_4:-33240986 | None:intergenic |
| AAACCAGGATAGATTCCAAA+AGG | 0.532288 | 7_4:-33240116 | None:intergenic |
| CCAGCTGCTTCATATGTCAC+TGG | 0.537779 | 7_4:+33241025 | Msa1150210:CDS |
| ATAGTGTTCATATCTTCTGT+TGG | 0.547641 | 7_4:+33239831 | Msa1150210:CDS |
| ACCTAAGGACATCTCAGCAT+TGG | 0.551404 | 7_4:+33240985 | Msa1150210:CDS |
| ATGATTCAGGCACGCAATTG+TGG | 0.551504 | 7_4:+33237274 | Msa1150210:intron |
| GATCAAAGATGGTCACTCCA+AGG | 0.562173 | 7_4:+33237121 | Msa1150210:CDS |
| TGGTCGTGTTGGAGAACCTA+AGG | 0.563951 | 7_4:+33240970 | Msa1150210:CDS |
| TTGGAAGAGTGGAAAGGCAA+AGG | 0.565426 | 7_4:+33237365 | Msa1150210:CDS |
| CATAGCATTGGAATGGGCAA+AGG | 0.569057 | 7_4:+33240047 | Msa1150210:CDS |
| GGACAGATTATCACTGCAGA+TGG | 0.571439 | 7_4:+33241046 | Msa1150210:CDS |
| CTGGAGGAACTCGAGGCATA+GGG | 0.575266 | 7_4:+33237161 | Msa1150210:CDS |
| CAGATTATCACTGCAGATGG+AGG | 0.582842 | 7_4:+33241049 | Msa1150210:CDS |
| CGAAGATATAATAACCACAA+TGG | 0.591713 | 7_4:+33239734 | Msa1150210:CDS |
| ATCAAAGATGGTCACTCCAA+GGG | 0.603161 | 7_4:+33237122 | Msa1150210:CDS |
| CAGTGACATATGAAGCAGCT+GGG | 0.614409 | 7_4:-33241024 | None:intergenic |
| CTTGTAACTGGAGGAACTCG+AGG | 0.621954 | 7_4:+33237154 | Msa1150210:CDS |
| GGAAGAATTAGCGGAATTTG+GGG | 0.627812 | 7_4:+33237295 | Msa1150210:CDS |
| ACTAGACGCTAGATCATCCA+TGG | 0.632855 | 7_4:-33240939 | None:intergenic |
| CTAGCGTCTAGTGCACCTGT+TGG | 0.636200 | 7_4:+33240950 | Msa1150210:CDS |
| AAATGTTTGGAAGAGTGGAA+AGG | 0.645971 | 7_4:+33237359 | Msa1150210:CDS |
| TAATATTCGAGCAAATGTTG+TGG | 0.671399 | 7_4:+33240071 | Msa1150210:CDS |
| AAGACAGCTCTTGTAACTGG+AGG | 0.711862 | 7_4:+33237145 | Msa1150210:CDS |
| TGACATATGAAGCAGCTGGG+AGG | 0.714771 | 7_4:-33241021 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAAAAGAAAATAACT+TGG | - | chr7_4:33239410-33239429 | None:intergenic | 10.0% |
| !!! | TTTTCTTTTATATTTTTGAA+AGG | + | chr7_4:33239415-33239434 | Msa1150210:intron | 10.0% |
| !!! | ATATTAATTGATTTTTCAAA+GGG | - | chr7_4:33239470-33239489 | None:intergenic | 10.0% |
| !!! | AATATTAATTGATTTTTCAA+AGG | - | chr7_4:33239471-33239490 | None:intergenic | 10.0% |
| !!! | ATGATAATATTTTTAAATTC+AGG | + | chr7_4:33240000-33240019 | Msa1150210:intron | 10.0% |
| !! | ACAAAATATATGTATTAATT+TGG | + | chr7_4:33241121-33241140 | Msa1150210:three_prime_UTR | 10.0% |
| !!! | TTTTATCTCTATTTTATCTT+TGG | - | chr7_4:33237959-33237978 | None:intergenic | 15.0% |
| !! | TACATAATTTAATTATGAGT+TGG | + | chr7_4:33238185-33238204 | Msa1150210:intron | 15.0% |
| !!! | AATTTTTTATTCTCTTGTAA+CGG | + | chr7_4:33238571-33238590 | Msa1150210:intron | 15.0% |
| !!! | TTAATTTTTAGTCAAATCAA+CGG | + | chr7_4:33239627-33239646 | Msa1150210:intron | 15.0% |
| !!! | TATGTTTATATCTTTTAACA+TGG | + | chr7_4:33239912-33239931 | Msa1150210:intron | 15.0% |
| !! | AGGATTTGAATATAATTATA+TGG | + | chr7_4:33240447-33240466 | Msa1150210:intron | 15.0% |
| !! | TTTGAATATAATTATATGGA+CGG | + | chr7_4:33240451-33240470 | Msa1150210:intron | 15.0% |
| !!! | TTCTAAAAAATTTTTCTTGA+AGG | + | chr7_4:33240657-33240676 | Msa1150210:intron | 15.0% |
| !!! | TAAAATCAATTTTAAATGAG+AGG | + | chr7_4:33240734-33240753 | Msa1150210:intron | 15.0% |
| !! | AACAAAAGTAGTTTAAATAA+TGG | - | chr7_4:33240890-33240909 | None:intergenic | 15.0% |
| !!! | TTTCTTCATTTTCTAATTTT+AGG | - | chr7_4:33241098-33241117 | None:intergenic | 15.0% |
| !! | TTCAATTTCAATTATGATTC+AGG | + | chr7_4:33237261-33237280 | Msa1150210:intron | 20.0% |
| !! | TTCTGATTGATAAAAAATAG+CGG | + | chr7_4:33237738-33237757 | Msa1150210:intron | 20.0% |
| !! | TATATCAGATGAGATTATAA+CGG | + | chr7_4:33237778-33237797 | Msa1150210:intron | 20.0% |
| !!! | AAAAATTAGTAAGTGTCTTT+TGG | - | chr7_4:33238148-33238167 | None:intergenic | 20.0% |
| !!! | AAAAGACACTTACTAATTTT+TGG | + | chr7_4:33238147-33238166 | Msa1150210:intron | 20.0% |
| !! | AATAAATTGAATTGGAAGTT+TGG | - | chr7_4:33238315-33238334 | None:intergenic | 20.0% |
| !! | TTACGAACAATAAATTGAAT+TGG | - | chr7_4:33238323-33238342 | None:intergenic | 20.0% |
| !!! | AATTGATTCTTGGATAATTT+AGG | - | chr7_4:33238819-33238838 | None:intergenic | 20.0% |
| !! | ATATACTATTTGCTTACAAA+AGG | - | chr7_4:33239378-33239397 | None:intergenic | 20.0% |
| !! | AAAAATTAAAATCACAAACC+AGG | - | chr7_4:33240134-33240153 | None:intergenic | 20.0% |
| !! | GAATTAATATTTATCGTTGA+AGG | + | chr7_4:33240427-33240446 | Msa1150210:intron | 20.0% |
| !! | TTGAATATAATTATATGGAC+GGG | + | chr7_4:33240452-33240471 | Msa1150210:intron | 20.0% |
| !! | ACTTTAAATTTAGATATCCT+TGG | + | chr7_4:33240522-33240541 | Msa1150210:intron | 20.0% |
| !!! | ACTTTTGTTATAGAAATCTA+AGG | + | chr7_4:33240901-33240920 | Msa1150210:intron | 20.0% |
| !!! | TATGTATTAATTTGGTTTCA+TGG | + | chr7_4:33241129-33241148 | Msa1150210:three_prime_UTR | 20.0% |
| ! | TGAAATTCAAAGATCAAAGA+TGG | + | chr7_4:33237110-33237129 | Msa1150210:CDS | 25.0% |
| ! | AGATGATATTGACAAATGTT+TGG | + | chr7_4:33237346-33237365 | Msa1150210:CDS | 25.0% |
| !!! | ACAATTTGTTACAATTGACA+TGG | + | chr7_4:33237555-33237574 | Msa1150210:intron | 25.0% |
| !!! | TAGATATTTAGCTTGTTGAT+CGG | - | chr7_4:33237693-33237712 | None:intergenic | 25.0% |
| ! | ATGACACAAAATCAAGTTTA+TGG | - | chr7_4:33238124-33238143 | None:intergenic | 25.0% |
| ! | AGAAATTGATGAAATTGATC+TGG | + | chr7_4:33238283-33238302 | Msa1150210:intron | 25.0% |
| !! | AGTTTTCCATTGTGTATTAA+AGG | - | chr7_4:33238676-33238695 | None:intergenic | 25.0% |
| ! | TGGAAAACTTTAACAAACTA+TGG | + | chr7_4:33238687-33238706 | Msa1150210:intron | 25.0% |
| ! | CTAATAACAAGTAAACTACA+TGG | + | chr7_4:33238713-33238732 | Msa1150210:intron | 25.0% |
| !!! | GTTGTAGTATAGAGTTTTAA+CGG | - | chr7_4:33239266-33239285 | None:intergenic | 25.0% |
| ! | GATTGTGGTTAGAATAATTA+GGG | - | chr7_4:33239346-33239365 | None:intergenic | 25.0% |
| !!! | GGAATTTTAGGAAAATAACT+TGG | - | chr7_4:33239442-33239461 | None:intergenic | 25.0% |
| ! | AATACAAAATGATGTGTACA+TGG | - | chr7_4:33239518-33239537 | None:intergenic | 25.0% |
| !! | TATTTTCTTATGTGTACATG+TGG | - | chr7_4:33239700-33239719 | None:intergenic | 25.0% |
| ! | CATTGTGGTTATTATATCTT+CGG | - | chr7_4:33239736-33239755 | None:intergenic | 25.0% |
| ! | GAAGATATAATAACCACAAT+GGG | + | chr7_4:33239735-33239754 | Msa1150210:CDS | 25.0% |
| ! | TATTCTTACTGACATTTCTT+TGG | - | chr7_4:33240208-33240227 | None:intergenic | 25.0% |
| ! | TCTAGAAATTTATTTGTGCT+AGG | + | chr7_4:33240374-33240393 | Msa1150210:intron | 25.0% |
| ! | TTAACAACATAATATGCAAG+AGG | - | chr7_4:33240840-33240859 | None:intergenic | 25.0% |
| ! | TTTCCATCAATTTTTCACGT+TGG | - | chr7_4:33237433-33237452 | None:intergenic | 30.0% |
| !! | CTTACTAATTTTTGGAGAAG+TGG | + | chr7_4:33238155-33238174 | Msa1150210:intron | 30.0% |
| !! | ATTTCTTTCTGAGTTGGTTA+CGG | - | chr7_4:33238269-33238288 | None:intergenic | 30.0% |
| TCATCAATTTCTTTCTGAGT+TGG | - | chr7_4:33238275-33238294 | None:intergenic | 30.0% | |
| ATTGATGAAATTGATCTGGT+TGG | + | chr7_4:33238287-33238306 | Msa1150210:intron | 30.0% | |
| AAACAAAGTGAATAGAAGAG+AGG | + | chr7_4:33238500-33238519 | Msa1150210:intron | 30.0% | |
| AATGATAGAGATAGGAAAAG+AGG | + | chr7_4:33238525-33238544 | Msa1150210:intron | 30.0% | |
| ATGATAGAGATAGGAAAAGA+GGG | + | chr7_4:33238526-33238545 | Msa1150210:intron | 30.0% | |
| TGTTCTCCTTTAATACACAA+TGG | + | chr7_4:33238667-33238686 | Msa1150210:intron | 30.0% | |
| ! | ATAGGTTGTGTACATTGTTT+TGG | - | chr7_4:33238782-33238801 | None:intergenic | 30.0% |
| GATAATTTAGGTCTTAGAGT+CGG | - | chr7_4:33238807-33238826 | None:intergenic | 30.0% | |
| TCTTTATGGCATAAGTGAAT+GGG | - | chr7_4:33238859-33238878 | None:intergenic | 30.0% | |
| ATCTTTATGGCATAAGTGAA+TGG | - | chr7_4:33238860-33238879 | None:intergenic | 30.0% | |
| GAGCAGAATTCAAATCTTTA+TGG | - | chr7_4:33238873-33238892 | None:intergenic | 30.0% | |
| !! | GTATTTTGGAAAGTTCAGTT+GGG | - | chr7_4:33238920-33238939 | None:intergenic | 30.0% |
| ! | GTATTTTCGGTATTTCAGTT+GGG | + | chr7_4:33239133-33239152 | Msa1150210:intron | 30.0% |
| TGTAGGTGAAATATTAGGTT+CGG | - | chr7_4:33239212-33239231 | None:intergenic | 30.0% | |
| GAATTTAATGTTCCTCTTTC+GGG | - | chr7_4:33239324-33239343 | None:intergenic | 30.0% | |
| GGAATTTAATGTTCCTCTTT+CGG | - | chr7_4:33239325-33239344 | None:intergenic | 30.0% | |
| GGATTGTGGTTAGAATAATT+AGG | - | chr7_4:33239347-33239366 | None:intergenic | 30.0% | |
| ATTTGCTTACAAAAGGAGTT+TGG | - | chr7_4:33239371-33239390 | None:intergenic | 30.0% | |
| AGAAAATAACTTGGATCAAC+TGG | - | chr7_4:33239401-33239420 | None:intergenic | 30.0% | |
| CGAAGATATAATAACCACAA+TGG | + | chr7_4:33239734-33239753 | Msa1150210:CDS | 30.0% | |
| !! | ATCCAGATTCTTTTAGAAGT+GGG | - | chr7_4:33239803-33239822 | None:intergenic | 30.0% |
| !! | TATCCAGATTCTTTTAGAAG+TGG | - | chr7_4:33239804-33239823 | None:intergenic | 30.0% |
| ! | CTTCTAAAAGAATCTGGATA+TGG | + | chr7_4:33239804-33239823 | Msa1150210:CDS | 30.0% |
| ATAGTGTTCATATCTTCTGT+TGG | + | chr7_4:33239831-33239850 | Msa1150210:CDS | 30.0% | |
| ATAAGAAAACGTACCTTTAG+AGG | - | chr7_4:33239895-33239914 | None:intergenic | 30.0% | |
| !!! | GTTTTTGGTGAGTTGATTTA+CGG | - | chr7_4:33240028-33240047 | None:intergenic | 30.0% |
| ! | CAAAAACATAGCATTGGAAT+GGG | + | chr7_4:33240041-33240060 | Msa1150210:CDS | 30.0% |
| TAATATTCGAGCAAATGTTG+TGG | + | chr7_4:33240071-33240090 | Msa1150210:CDS | 30.0% | |
| TGAGCTTAGTTCAATTGATA+GGG | + | chr7_4:33240572-33240591 | Msa1150210:intron | 30.0% | |
| TACTAACTACCTACTTTGTA+CGG | + | chr7_4:33240704-33240723 | Msa1150210:intron | 30.0% | |
| AATATGCAAGAGGATATAAG+AGG | - | chr7_4:33240830-33240849 | None:intergenic | 30.0% | |
| TGGAAGAATTAGCGGAATTT+GGG | + | chr7_4:33237294-33237313 | Msa1150210:CDS | 35.0% | |
| TTGACAAATGTTTGGAAGAG+TGG | + | chr7_4:33237354-33237373 | Msa1150210:CDS | 35.0% | |
| AAATGTTTGGAAGAGTGGAA+AGG | + | chr7_4:33237359-33237378 | Msa1150210:CDS | 35.0% | |
| TGACCAACGTGAAAAATTGA+TGG | + | chr7_4:33237427-33237446 | Msa1150210:CDS | 35.0% | |
| ! | ACTGTTGCTTCAATCTTTCA+TGG | + | chr7_4:33237452-33237471 | Msa1150210:CDS | 35.0% |
| ! | GAGAACTCATTGATTGATTG+AGG | + | chr7_4:33237617-33237636 | Msa1150210:intron | 35.0% |
| !! | ACTAATTTTTGGAGAAGTGG+TGG | + | chr7_4:33238158-33238177 | Msa1150210:intron | 35.0% |
| ! | GGTTGACACTTAATGAGTTT+TGG | + | chr7_4:33238206-33238225 | Msa1150210:intron | 35.0% |
| !!! | ACACTTAATGAGTTTTGGAG+AGG | + | chr7_4:33238211-33238230 | Msa1150210:intron | 35.0% |
| GTAGAAACTCATAGATGCAT+GGG | - | chr7_4:33238402-33238421 | None:intergenic | 35.0% | |
| TGTAGAAACTCATAGATGCA+TGG | - | chr7_4:33238403-33238422 | None:intergenic | 35.0% | |
| GAGAGGAAAATGATAGAGAT+AGG | + | chr7_4:33238517-33238536 | Msa1150210:intron | 35.0% | |
| ATCAATTCCTTATCCCCAAA+TGG | + | chr7_4:33238832-33238851 | Msa1150210:intron | 35.0% | |
| ATAAGTGAATGGGTCCATTT+GGG | - | chr7_4:33238849-33238868 | None:intergenic | 35.0% | |
| !! | GGTATTTTGGAAAGTTCAGT+TGG | - | chr7_4:33238921-33238940 | None:intergenic | 35.0% |
| TTGCGTTATTTAACTAACGC+AGG | + | chr7_4:33239109-33239128 | Msa1150210:intron | 35.0% | |
| TGCGTTATTTAACTAACGCA+GGG | + | chr7_4:33239110-33239129 | Msa1150210:intron | 35.0% | |
| ! | GGTATTTTCGGTATTTCAGT+TGG | + | chr7_4:33239132-33239151 | Msa1150210:intron | 35.0% |
| ATCGGTGTAGGTGAAATATT+AGG | - | chr7_4:33239217-33239236 | None:intergenic | 35.0% | |
| !! | TTGATTTTTCAAAGGGAAGC+AGG | - | chr7_4:33239463-33239482 | None:intergenic | 35.0% |
| CAAAATGATGTGTACATGGT+TGG | - | chr7_4:33239514-33239533 | None:intergenic | 35.0% | |
| ! | TACCCACTTCTAAAAGAATC+TGG | + | chr7_4:33239798-33239817 | Msa1150210:CDS | 35.0% |
| ACTCACCAAAAACATAGCAT+TGG | + | chr7_4:33240035-33240054 | Msa1150210:CDS | 35.0% | |
| ! | CCATTCCAATGCTATGTTTT+TGG | - | chr7_4:33240043-33240062 | None:intergenic | 35.0% |
| ! | CCAAAAACATAGCATTGGAA+TGG | + | chr7_4:33240040-33240059 | Msa1150210:CDS | 35.0% |
| ! | AGCTGTTAATACTGACCTTT+TGG | + | chr7_4:33240101-33240120 | Msa1150210:CDS | 35.0% |
| AAACCAGGATAGATTCCAAA+AGG | - | chr7_4:33240119-33240138 | None:intergenic | 35.0% | |
| TAGATATCCTTGGTAAGAGA+TGG | + | chr7_4:33240532-33240551 | Msa1150210:intron | 35.0% | |
| GTGAGCTTAGTTCAATTGAT+AGG | + | chr7_4:33240571-33240590 | Msa1150210:intron | 35.0% | |
| TAAGTACTACCGTACAAAGT+AGG | - | chr7_4:33240716-33240735 | None:intergenic | 35.0% | |
| ATCAAAGATGGTCACTCCAA+GGG | + | chr7_4:33237122-33237141 | Msa1150210:CDS | 40.0% | |
| CGCAATTGTGGAAGAATTAG+CGG | + | chr7_4:33237286-33237305 | Msa1150210:CDS | 40.0% | |
| GTGGAAGAATTAGCGGAATT+TGG | + | chr7_4:33237293-33237312 | Msa1150210:CDS | 40.0% | |
| GGAAGAATTAGCGGAATTTG+GGG | + | chr7_4:33237295-33237314 | Msa1150210:CDS | 40.0% | |
| ! | GCAAAGGATTTTGTGTGACA+GGG | + | chr7_4:33237381-33237400 | Msa1150210:CDS | 40.0% |
| ! | GGGGATAAGGAATTGATTCT+TGG | - | chr7_4:33238829-33238848 | None:intergenic | 40.0% |
| TAAGTGAATGGGTCCATTTG+GGG | - | chr7_4:33238848-33238867 | None:intergenic | 40.0% | |
| CATAAGTGAATGGGTCCATT+TGG | - | chr7_4:33238850-33238869 | None:intergenic | 40.0% | |
| ! | TTTTCAGCGTGAGTTAACTC+AGG | + | chr7_4:33239022-33239041 | Msa1150210:intron | 40.0% |
| GCGTTATTTAACTAACGCAG+GGG | + | chr7_4:33239111-33239130 | Msa1150210:intron | 40.0% | |
| !!! | AACTAACGCAGGGGTATTTT+CGG | + | chr7_4:33239120-33239139 | Msa1150210:intron | 40.0% |
| GTGAAATATTAGGTTCGGCT+TGG | - | chr7_4:33239207-33239226 | None:intergenic | 40.0% | |
| AAAAGGAGTTTGGAGGATTG+TGG | - | chr7_4:33239361-33239380 | None:intergenic | 40.0% | |
| TGCTTACAAAAGGAGTTTGG+AGG | - | chr7_4:33239368-33239387 | None:intergenic | 40.0% | |
| ! | CAAAGGGAAGCAGGAATTTT+AGG | - | chr7_4:33239454-33239473 | None:intergenic | 40.0% |
| CTCAAAATTTGTGCCCATTG+TGG | - | chr7_4:33239751-33239770 | None:intergenic | 40.0% | |
| !! | ATGGGCACAAATTTTGAGTC+TGG | + | chr7_4:33239753-33239772 | Msa1150210:CDS | 40.0% |
| GGTATGCTAGTTGACATAGA+TGG | - | chr7_4:33239782-33239801 | None:intergenic | 40.0% | |
| GTGTTCATATCTTCTGTTGG+AGG | + | chr7_4:33239834-33239853 | Msa1150210:CDS | 40.0% | |
| TCTATCTATGCAGCCTCTAA+AGG | + | chr7_4:33239879-33239898 | Msa1150210:CDS | 40.0% | |
| !!! | TGACCTTTTGGAATCTATCC+TGG | + | chr7_4:33240113-33240132 | Msa1150210:CDS | 40.0% |
| ! | GGCTTTTGATAAGATCACCA+TGG | + | chr7_4:33240922-33240941 | Msa1150210:CDS | 40.0% |
| GATCAAAGATGGTCACTCCA+AGG | + | chr7_4:33237121-33237140 | Msa1150210:CDS | 45.0% | |
| TTACAAGAGCTGTCTTCCCT+TGG | - | chr7_4:33237141-33237160 | None:intergenic | 45.0% | |
| AAGACAGCTCTTGTAACTGG+AGG | + | chr7_4:33237145-33237164 | Msa1150210:CDS | 45.0% | |
| ATGATTCAGGCACGCAATTG+TGG | + | chr7_4:33237274-33237293 | Msa1150210:intron | 45.0% | |
| TTGGAAGAGTGGAAAGGCAA+AGG | + | chr7_4:33237365-33237384 | Msa1150210:CDS | 45.0% | |
| ! | GGCAAAGGATTTTGTGTGAC+AGG | + | chr7_4:33237380-33237399 | Msa1150210:CDS | 45.0% |
| !!! | AATGAGTTTTGGAGAGGTCG+TGG | + | chr7_4:33238217-33238236 | Msa1150210:intron | 45.0% |
| AACTCATAGATGCATGGGAG+TGG | - | chr7_4:33238397-33238416 | None:intergenic | 45.0% | |
| GATAGGAAAAGAGGGACAAG+TGG | + | chr7_4:33238534-33238553 | Msa1150210:intron | 45.0% | |
| TAGGTCTTAGAGTCGGTGAT+AGG | - | chr7_4:33238800-33238819 | None:intergenic | 45.0% | |
| AATGGGTCCATTTGGGGATA+AGG | - | chr7_4:33238842-33238861 | None:intergenic | 45.0% | |
| !!! | TAACTCACGCAGGGGTATTT+TGG | - | chr7_4:33238934-33238953 | None:intergenic | 45.0% |
| TGAGTTAACTCACGTTGCGT+GGG | - | chr7_4:33238958-33238977 | None:intergenic | 45.0% | |
| ATGAGTTAACTCACGTTGCG+TGG | - | chr7_4:33238959-33238978 | None:intergenic | 45.0% | |
| ACTATACCGAGGTTAGAGGT+AGG | - | chr7_4:33239240-33239259 | None:intergenic | 45.0% | |
| TTTAACGGCACACTATACCG+AGG | - | chr7_4:33239251-33239270 | None:intergenic | 45.0% | |
| GGTTTAGGGAGGAAAGAGAT+AGG | - | chr7_4:33239288-33239307 | None:intergenic | 45.0% | |
| ! | GAAAGTGGTGTTGGGGTTTA+GGG | - | chr7_4:33239302-33239321 | None:intergenic | 45.0% |
| TCTTTCGGGAAAGTGGTGTT+GGG | - | chr7_4:33239310-33239329 | None:intergenic | 45.0% | |
| ATGTTCCTCTTTCGGGAAAG+TGG | - | chr7_4:33239317-33239336 | None:intergenic | 45.0% | |
| ! | CATAGCATTGGAATGGGCAA+AGG | + | chr7_4:33240047-33240066 | Msa1150210:CDS | 45.0% |
| AGGTCAGTATTAACAGCTCC+AGG | - | chr7_4:33240099-33240118 | None:intergenic | 45.0% | |
| TCACTGTCCATCTCTTACCA+AGG | - | chr7_4:33240542-33240561 | None:intergenic | 45.0% | |
| ACTAGACGCTAGATCATCCA+TGG | - | chr7_4:33240942-33240961 | None:intergenic | 45.0% | |
| ACCTAAGGACATCTCAGCAT+TGG | + | chr7_4:33240985-33241004 | Msa1150210:CDS | 45.0% | |
| ACCAATGCTGAGATGTCCTT+AGG | - | chr7_4:33240989-33241008 | None:intergenic | 45.0% | |
| CAGTGACATATGAAGCAGCT+GGG | - | chr7_4:33241027-33241046 | None:intergenic | 45.0% | |
| GGACAGATTATCACTGCAGA+TGG | + | chr7_4:33241046-33241065 | Msa1150210:CDS | 45.0% | |
| CAGATTATCACTGCAGATGG+AGG | + | chr7_4:33241049-33241068 | Msa1150210:CDS | 45.0% | |
| !!! | TATTTTTATATTTATTTCTT+AGG | + | chr7_4:33239662-33239681 | Msa1150210:intron | 5.0% |
| !!! | TTTAATTTTTTATTTCATTA+TGG | + | chr7_4:33240144-33240163 | Msa1150210:intron | 5.0% |
| GGGAAGACAGCTCTTGTAAC+TGG | + | chr7_4:33237142-33237161 | Msa1150210:CDS | 50.0% | |
| CTTGTAACTGGAGGAACTCG+AGG | + | chr7_4:33237154-33237173 | Msa1150210:CDS | 50.0% | |
| CTGCGTAACTTAACTCACGC+TGG | - | chr7_4:33239060-33239079 | None:intergenic | 50.0% | |
| GTTAGAGGTAGGATCGGTGT+AGG | - | chr7_4:33239229-33239248 | None:intergenic | 50.0% | |
| ACCGATCCTACCTCTAACCT+CGG | + | chr7_4:33239231-33239250 | Msa1150210:intron | 50.0% | |
| ACCGAGGTTAGAGGTAGGAT+CGG | - | chr7_4:33239235-33239254 | None:intergenic | 50.0% | |
| GCACACTATACCGAGGTTAG+AGG | - | chr7_4:33239244-33239263 | None:intergenic | 50.0% | |
| ! | GGAAAGTGGTGTTGGGGTTT+AGG | - | chr7_4:33239303-33239322 | None:intergenic | 50.0% |
| ! | CTTTCGGGAAAGTGGTGTTG+GGG | - | chr7_4:33239309-33239328 | None:intergenic | 50.0% |
| CTCTTTCGGGAAAGTGGTGT+TGG | - | chr7_4:33239311-33239330 | None:intergenic | 50.0% | |
| CAACACCACTTTCCCGAAAG+AGG | + | chr7_4:33239309-33239328 | Msa1150210:intron | 50.0% | |
| TGGTCGTGTTGGAGAACCTA+AGG | + | chr7_4:33240970-33240989 | Msa1150210:CDS | 50.0% | |
| TGACATATGAAGCAGCTGGG+AGG | - | chr7_4:33241024-33241043 | None:intergenic | 50.0% | |
| CCAGTGACATATGAAGCAGC+TGG | - | chr7_4:33241028-33241047 | None:intergenic | 50.0% | |
| CCAGCTGCTTCATATGTCAC+TGG | + | chr7_4:33241025-33241044 | Msa1150210:CDS | 50.0% | |
| ACTGGAGGAACTCGAGGCAT+AGG | + | chr7_4:33237160-33237179 | Msa1150210:CDS | 55.0% | |
| CTGGAGGAACTCGAGGCATA+GGG | + | chr7_4:33237161-33237180 | Msa1150210:CDS | 55.0% | |
| GGGCGCGAGCAAAATGTGTT+AGG | - | chr7_4:33239153-33239172 | None:intergenic | 55.0% | |
| ! | TGCGTGGGTTAACTCACGCA+GGG | - | chr7_4:33238943-33238962 | None:intergenic | 55.0% |
| ! | TTGCGTGGGTTAACTCACGC+AGG | - | chr7_4:33238944-33238963 | None:intergenic | 55.0% |
| TGGGCGCGAGCAAAATGTGT+TGG | + | chr7_4:33239152-33239171 | Msa1150210:intron | 55.0% | |
| GGGCGCGAGCAAAATGTGTT+GGG | + | chr7_4:33239153-33239172 | Msa1150210:intron | 55.0% | |
| ! | AGTGGTGTTGGGGTTTAGGG+AGG | - | chr7_4:33239299-33239318 | None:intergenic | 55.0% |
| CGAGCAAATGTTGTGGCACC+TGG | + | chr7_4:33240078-33240097 | Msa1150210:CDS | 55.0% | |
| CTAGCGTCTAGTGCACCTGT+TGG | + | chr7_4:33240950-33240969 | Msa1150210:CDS | 55.0% | |
| AGTGCACCTGTTGGTCGTGT+TGG | + | chr7_4:33240959-33240978 | Msa1150210:CDS | 55.0% | |
| GGTTCTCCAACACGACCAAC+AGG | - | chr7_4:33240968-33240987 | None:intergenic | 55.0% | |
| ! | GCGTGGGTTAACTCACGCAG+GGG | - | chr7_4:33238942-33238961 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 33237094 | 33241162 | 33237094 | ID=Msa1150210;Name=Msa1150210 |
| chr7_4 | mRNA | 33237094 | 33241162 | 33237094 | ID=Msa1150210-mRNA-1;Parent=Msa1150210;Name=Msa1150210-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.5|0.4|1|1|1|5|78|265 |
| chr7_4 | exon | 33237094 | 33237182 | 33237094 | ID=Msa1150210-mRNA-1:exon:7900;Parent=Msa1150210-mRNA-1 |
| chr7_4 | exon | 33237283 | 33237490 | 33237283 | ID=Msa1150210-mRNA-1:exon:7901;Parent=Msa1150210-mRNA-1 |
| chr7_4 | exon | 33239684 | 33239900 | 33239684 | ID=Msa1150210-mRNA-1:exon:7902;Parent=Msa1150210-mRNA-1 |
| chr7_4 | exon | 33240022 | 33240134 | 33240022 | ID=Msa1150210-mRNA-1:exon:7903;Parent=Msa1150210-mRNA-1 |
| chr7_4 | exon | 33240914 | 33241162 | 33240914 | ID=Msa1150210-mRNA-1:exon:7904;Parent=Msa1150210-mRNA-1 |
| chr7_4 | CDS | 33237094 | 33237182 | 33237094 | ID=Msa1150210-mRNA-1:cds;Parent=Msa1150210-mRNA-1 |
| chr7_4 | CDS | 33237283 | 33237490 | 33237283 | ID=Msa1150210-mRNA-1:cds;Parent=Msa1150210-mRNA-1 |
| chr7_4 | CDS | 33239684 | 33239900 | 33239684 | ID=Msa1150210-mRNA-1:cds;Parent=Msa1150210-mRNA-1 |
| chr7_4 | CDS | 33240022 | 33240134 | 33240022 | ID=Msa1150210-mRNA-1:cds;Parent=Msa1150210-mRNA-1 |
| chr7_4 | CDS | 33240914 | 33241084 | 33240914 | ID=Msa1150210-mRNA-1:cds;Parent=Msa1150210-mRNA-1 |
| chr7_4 | three_prime_UTR | 33241085 | 33241162 | 33241085 | ID=Msa1150210-mRNA-1:three_prime_utr;Parent=Msa1150210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
