Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43492.t1 | XP_013458738.1 | 95.9 | 338 | 12 | 1 | 1 | 338 | 1 | 336 | 4.00E-175 | 624 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43492.t1 | Q4LDF9 | 79.9 | 343 | 50 | 5 | 1 | 338 | 1 | 329 | 2.9e-150 | 532.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43492.t1 | A0A072V3P1 | 95.9 | 338 | 12 | 1 | 1 | 338 | 1 | 336 | 2.9e-175 | 624.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene43492 | 0.874432 | 6.78E-68 | -1.69E-46 |
| MS.gene049173 | MS.gene43492 | 0.810768 | 9.78E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene43492 | 0.831618 | 1.51E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene43492 | 0.857348 | 1.74E-62 | -1.69E-46 |
| MS.gene049232 | MS.gene43492 | 0.82692 | 2.08E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene43492 | 0.890978 | 6.04E-74 | -1.69E-46 |
| MS.gene049320 | MS.gene43492 | 0.873601 | 1.30E-67 | -1.69E-46 |
| MS.gene049366 | MS.gene43492 | 0.80511 | 1.56E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene43492 | 0.824015 | 1.01E-53 | -1.69E-46 |
| MS.gene049627 | MS.gene43492 | 0.908751 | 1.21E-81 | -1.69E-46 |
| MS.gene049633 | MS.gene43492 | 0.832472 | 9.27E-56 | -1.69E-46 |
| MS.gene049865 | MS.gene43492 | 0.847695 | 9.83E-60 | -1.69E-46 |
| MS.gene05010 | MS.gene43492 | 0.849176 | 3.83E-60 | -1.69E-46 |
| MS.gene050163 | MS.gene43492 | 0.894202 | 3.08E-75 | -1.69E-46 |
| MS.gene050165 | MS.gene43492 | 0.896329 | 4.10E-76 | -1.69E-46 |
| MS.gene050170 | MS.gene43492 | 0.830677 | 2.57E-55 | -1.69E-46 |
| MS.gene050323 | MS.gene43492 | 0.809022 | 2.32E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene43492 | 0.855053 | 8.17E-62 | -1.69E-46 |
| MS.gene050496 | MS.gene43492 | 0.812825 | 3.49E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene43492 | 0.901013 | 4.12E-78 | -1.69E-46 |
| MS.gene050518 | MS.gene43492 | 0.885939 | 5.28E-72 | -1.69E-46 |
| MS.gene050577 | MS.gene43492 | 0.885034 | 1.15E-71 | -1.69E-46 |
| MS.gene050612 | MS.gene43492 | 0.878503 | 2.67E-69 | -1.69E-46 |
| MS.gene050675 | MS.gene43492 | 0.855492 | 6.09E-62 | -1.69E-46 |
| MS.gene050699 | MS.gene43492 | 0.878413 | 2.86E-69 | -1.69E-46 |
| MS.gene050747 | MS.gene43492 | 0.828143 | 1.06E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene43492 | 0.83121 | 1.90E-55 | -1.69E-46 |
| MS.gene050781 | MS.gene43492 | 0.815716 | 8.02E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene43492 | 0.80523 | 1.48E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene43492 | 0.817652 | 2.95E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene43492 | 0.817128 | 3.87E-52 | -1.69E-46 |
| MS.gene050876 | MS.gene43492 | 0.868168 | 7.98E-66 | -1.69E-46 |
| MS.gene05087 | MS.gene43492 | 0.890985 | 6.00E-74 | -1.69E-46 |
| MS.gene050904 | MS.gene43492 | 0.879949 | 8.21E-70 | -1.69E-46 |
| MS.gene050950 | MS.gene43492 | 0.835917 | 1.27E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene43492 | 0.901971 | 1.56E-78 | -1.69E-46 |
| MS.gene05100 | MS.gene43492 | 0.836698 | 8.04E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene43492 | 0.875231 | 3.63E-68 | -1.69E-46 |
| MS.gene051551 | MS.gene43492 | 0.84135 | 5.01E-58 | -1.69E-46 |
| MS.gene051694 | MS.gene43492 | 0.818987 | 1.47E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene43492 | 0.854676 | 1.05E-61 | -1.69E-46 |
| MS.gene052164 | MS.gene43492 | 0.848201 | 7.13E-60 | -1.69E-46 |
| MS.gene052482 | MS.gene43492 | 0.865653 | 5.05E-65 | -1.69E-46 |
| MS.gene052486 | MS.gene43492 | 0.878715 | 2.24E-69 | -1.69E-46 |
| MS.gene052503 | MS.gene43492 | 0.811695 | 6.16E-51 | -1.69E-46 |
| MS.gene052605 | MS.gene43492 | 0.802764 | 4.81E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene43492 | 0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene052670 | MS.gene43492 | 0.83419 | 3.46E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene43492 | 0.808767 | 2.63E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene43492 | 0.806118 | 9.61E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene43492 | 0.84185 | 3.70E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene43492 | 0.862286 | 5.64E-64 | -1.69E-46 |
| MS.gene053207 | MS.gene43492 | 0.828918 | 6.88E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene43492 | 0.862116 | 6.36E-64 | -1.69E-46 |
| MS.gene053284 | MS.gene43492 | 0.803654 | 3.14E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene43492 | 0.866986 | 1.91E-65 | -1.69E-46 |
| MS.gene053480 | MS.gene43492 | 0.824263 | 8.87E-54 | -1.69E-46 |
| MS.gene053549 | MS.gene43492 | -0.801721 | 7.88E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene43492 | 0.831328 | 1.78E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene43492 | 0.806916 | 6.52E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene43492 | 0.811707 | 6.12E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene43492 | 0.815064 | 1.12E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene43492 | 0.867383 | 1.43E-65 | -1.69E-46 |
| MS.gene054638 | MS.gene43492 | 0.843172 | 1.65E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene43492 | 0.850657 | 1.47E-60 | -1.69E-46 |
| MS.gene05470 | MS.gene43492 | 0.885539 | 7.45E-72 | -1.69E-46 |
| MS.gene054927 | MS.gene43492 | 0.810871 | 9.29E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene43492 | 0.887053 | 2.00E-72 | -1.69E-46 |
| MS.gene055362 | MS.gene43492 | 0.884024 | 2.73E-71 | -1.69E-46 |
| MS.gene055502 | MS.gene43492 | 0.862414 | 5.16E-64 | -1.69E-46 |
| MS.gene055577 | MS.gene43492 | 0.869287 | 3.47E-66 | -1.69E-46 |
| MS.gene055748 | MS.gene43492 | 0.854838 | 9.43E-62 | -1.69E-46 |
| MS.gene055750 | MS.gene43492 | 0.825048 | 5.80E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene43492 | 0.858363 | 8.67E-63 | -1.69E-46 |
| MS.gene055776 | MS.gene43492 | 0.821768 | 3.39E-53 | -1.69E-46 |
| MS.gene055849 | MS.gene43492 | 0.804777 | 1.84E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene43492 | 0.852152 | 5.57E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene43492 | 0.805816 | 1.11E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene43492 | 0.82386 | 1.10E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene43492 | 0.823352 | 1.45E-53 | -1.69E-46 |
| MS.gene056409 | MS.gene43492 | 0.859661 | 3.54E-63 | -1.69E-46 |
| MS.gene056449 | MS.gene43492 | 0.819321 | 1.24E-52 | -1.69E-46 |
| MS.gene056450 | MS.gene43492 | 0.865527 | 5.54E-65 | -1.69E-46 |
| MS.gene056504 | MS.gene43492 | 0.865804 | 4.53E-65 | -1.69E-46 |
| MS.gene056510 | MS.gene43492 | 0.862271 | 5.70E-64 | -1.69E-46 |
| MS.gene056550 | MS.gene43492 | -0.849706 | 2.72E-60 | -1.69E-46 |
| MS.gene056610 | MS.gene43492 | 0.866692 | 2.37E-65 | -1.69E-46 |
| MS.gene056657 | MS.gene43492 | 0.861987 | 6.97E-64 | -1.69E-46 |
| MS.gene056692 | MS.gene43492 | 0.903548 | 3.10E-79 | -1.69E-46 |
| MS.gene056898 | MS.gene43492 | 0.822779 | 1.97E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene43492 | 0.812727 | 3.67E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene43492 | 0.85908 | 5.30E-63 | -1.69E-46 |
| MS.gene057831 | MS.gene43492 | 0.877144 | 7.95E-69 | -1.69E-46 |
| MS.gene057872 | MS.gene43492 | 0.811422 | 7.06E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene43492 | 0.86733 | 1.48E-65 | -1.69E-46 |
| MS.gene058335 | MS.gene43492 | 0.8238 | 1.14E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene43492 | 0.837515 | 4.97E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene43492 | 0.867309 | 1.50E-65 | -1.69E-46 |
| MS.gene058544 | MS.gene43492 | 0.865872 | 4.31E-65 | -1.69E-46 |
| MS.gene058719 | MS.gene43492 | 0.868902 | 4.62E-66 | -1.69E-46 |
| MS.gene058773 | MS.gene43492 | 0.886386 | 3.58E-72 | -1.69E-46 |
| MS.gene058838 | MS.gene43492 | 0.82275 | 2.00E-53 | -1.69E-46 |
| MS.gene05883 | MS.gene43492 | 0.812414 | 4.29E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene43492 | 0.897077 | 1.99E-76 | -1.69E-46 |
| MS.gene059023 | MS.gene43492 | 0.889002 | 3.58E-73 | -1.69E-46 |
| MS.gene059029 | MS.gene43492 | 0.806951 | 6.41E-50 | -1.69E-46 |
| MS.gene05912 | MS.gene43492 | 0.835703 | 1.44E-56 | -1.69E-46 |
| MS.gene05914 | MS.gene43492 | 0.805195 | 1.50E-49 | -1.69E-46 |
| MS.gene059181 | MS.gene43492 | 0.82819 | 1.03E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene43492 | 0.897804 | 9.85E-77 | -1.69E-46 |
| MS.gene059718 | MS.gene43492 | 0.876992 | 8.98E-69 | -1.69E-46 |
| MS.gene059756 | MS.gene43492 | 0.862838 | 3.82E-64 | -1.69E-46 |
| MS.gene059801 | MS.gene43492 | 0.842667 | 2.25E-58 | -1.69E-46 |
| MS.gene059837 | MS.gene43492 | 0.858979 | 5.68E-63 | -1.69E-46 |
| MS.gene059865 | MS.gene43492 | 0.858442 | 8.22E-63 | -1.69E-46 |
| MS.gene06000 | MS.gene43492 | 0.827307 | 1.68E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene43492 | 0.868789 | 5.03E-66 | -1.69E-46 |
| MS.gene060762 | MS.gene43492 | 0.888926 | 3.83E-73 | -1.69E-46 |
| MS.gene060778 | MS.gene43492 | 0.803314 | 3.70E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene43492 | 0.912255 | 2.40E-83 | -1.69E-46 |
| MS.gene06092 | MS.gene43492 | 0.846767 | 1.77E-59 | -1.69E-46 |
| MS.gene060982 | MS.gene43492 | 0.864848 | 9.05E-65 | -1.69E-46 |
| MS.gene061150 | MS.gene43492 | 0.884632 | 1.62E-71 | -1.69E-46 |
| MS.gene061171 | MS.gene43492 | 0.811935 | 5.46E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43492.t1 | MTR_4g134950 | 96.746 | 338 | 9 | 1 | 1 | 338 | 1 | 336 | 0.0 | 674 |
| MS.gene43492.t1 | MTR_4g134950 | 96.063 | 254 | 8 | 1 | 1 | 254 | 1 | 252 | 5.15e-179 | 496 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43492.t1 | AT2G43950 | 63.295 | 346 | 113 | 3 | 2 | 338 | 3 | 343 | 2.60e-153 | 434 |
| MS.gene43492.t1 | AT2G43950 | 58.958 | 307 | 112 | 3 | 2 | 299 | 3 | 304 | 6.07e-121 | 352 |
Find 94 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGGAGCGTGTAATTATT+AGG | 0.200366 | 8.4:+50923 | None:intergenic |
| CTGAAAAGATAATTTCAATT+TGG | 0.215408 | 8.4:+50733 | None:intergenic |
| CGTGTAATTATTAGGGTTTC+CGG | 0.226456 | 8.4:+50931 | None:intergenic |
| AATTGAACTTTCATCTTCAT+TGG | 0.277986 | 8.4:+47787 | None:intergenic |
| ATTTGACGGGAGAGAAAGTA+TGG | 0.298323 | 8.4:+50051 | None:intergenic |
| CCTTGGCTGGGCATCCCTTT+GGG | 0.317934 | 8.4:-48368 | MS.gene43492:intron |
| GGAAATCTGAAAGTTGCTTT+TGG | 0.321527 | 8.4:+50403 | None:intergenic |
| ATTCGGAGGTTCGCCTTGGC+TGG | 0.321634 | 8.4:-48381 | MS.gene43492:CDS |
| GCCTTGGCTGGGCATCCCTT+TGG | 0.333645 | 8.4:-48369 | MS.gene43492:CDS |
| ACAATTGCGATTCGAACTAT+TGG | 0.339553 | 8.4:-48459 | MS.gene43492:CDS |
| TATGGAGCGTGTAATTATTA+GGG | 0.342261 | 8.4:+50924 | None:intergenic |
| AGCACCAGTGAGTTTGAATC+TGG | 0.355796 | 8.4:+50592 | None:intergenic |
| AGAAGAGATGGGACATTTGA+TGG | 0.358516 | 8.4:-47708 | None:intergenic |
| TCTGTCAGTGGGATTCTTAA+AGG | 0.372625 | 8.4:-50304 | MS.gene43492:CDS |
| CTAGAGCACTGTGGTCTTCA+AGG | 0.384543 | 8.4:+50639 | None:intergenic |
| TTCCTTCAGGTTGGTGATGA+AGG | 0.388318 | 8.4:-47829 | MS.gene43492:intron |
| TACTCGGAAATGACAAGATA+TGG | 0.407168 | 8.4:+50843 | None:intergenic |
| ATTTAAAGCTGGTTATGATT+CGG | 0.428310 | 8.4:-48398 | MS.gene43492:CDS |
| AAGACCAAACCTACGCTTGA+AGG | 0.430680 | 8.4:+50015 | None:intergenic |
| TTGGTCTTTCTGACAAGTTA+AGG | 0.431557 | 8.4:-50000 | MS.gene43492:intron |
| TTTGTTGACGGCGGCGGCGG+CGG | 0.438275 | 8.4:+50866 | None:intergenic |
| AGAGAAAGAGGAGGAGCAGC+AGG | 0.441827 | 8.4:-50359 | MS.gene43492:CDS |
| CAACTACCGCCGGTGAGGAT+TGG | 0.444311 | 8.4:+50897 | None:intergenic |
| AAAATTTACAGGAAACTTTG+TGG | 0.453050 | 8.4:+50768 | None:intergenic |
| AGAGGAGGAGCAGCAGGAGG+AGG | 0.453391 | 8.4:-50353 | MS.gene43492:CDS |
| TGCGCTTTCGCTGTCGAACT+CGG | 0.456394 | 8.4:+50799 | None:intergenic |
| TTTGCCTTCAAGCGTAGGTT+TGG | 0.457188 | 8.4:-50019 | MS.gene43492:CDS |
| TGGTTTGTTGACGGCGGCGG+CGG | 0.466893 | 8.4:+50863 | None:intergenic |
| GAAGATTTCAAATTTAAAGC+TGG | 0.470602 | 8.4:-48409 | MS.gene43492:CDS |
| TGATAGTTGAAGTGCATAGC+CGG | 0.474867 | 8.4:+50514 | None:intergenic |
| ATATGGTTTGTTGACGGCGG+CGG | 0.478912 | 8.4:+50860 | None:intergenic |
| GTGGAGATGGATTCAGCAAC+CGG | 0.479701 | 8.4:-50950 | None:intergenic |
| TTCGGAGGTTCGCCTTGGCT+GGG | 0.481241 | 8.4:-48380 | MS.gene43492:CDS |
| GCCACTTCCATCCGCTGGAT+TGG | 0.483583 | 8.4:-50489 | MS.gene43492:intron |
| ATTCTGAGGGCAGGCCTACT+CGG | 0.483618 | 8.4:+50827 | None:intergenic |
| TATGATTCGGAGGTTCGCCT+TGG | 0.485674 | 8.4:-48385 | MS.gene43492:CDS |
| GATAGTTGAAGTGCATAGCC+GGG | 0.505267 | 8.4:+50515 | None:intergenic |
| GAATCTGGGACCAACGTCAA+TGG | 0.510577 | 8.4:+50607 | None:intergenic |
| ACCAATCCAGCGGATGGAAG+TGG | 0.512331 | 8.4:+50488 | None:intergenic |
| CTTCAGGTTGGTGATGAAGG+TGG | 0.513813 | 8.4:-47826 | MS.gene43492:intron |
| GACAAGATATGGTTTGTTGA+CGG | 0.514737 | 8.4:+50854 | None:intergenic |
| AGTTTCGTTACAAGAGAAAG+AGG | 0.517878 | 8.4:-50371 | MS.gene43492:CDS |
| AAATTTGAAATCTTCACCAT+AGG | 0.521461 | 8.4:+48417 | None:intergenic |
| TGTCATTTGCCTTCAAGCGT+AGG | 0.530223 | 8.4:-50024 | MS.gene43492:CDS |
| TGTTTCGGATTAAGAAGAGA+TGG | 0.531407 | 8.4:-47720 | MS.gene43492:CDS |
| GCAAATGACAAATCATTTGA+CGG | 0.532446 | 8.4:+50037 | None:intergenic |
| CACTGGTGCTCATGATGTCA+AGG | 0.533292 | 8.4:-50579 | MS.gene43492:CDS |
| TCAACGCCACTTCCATCCGC+TGG | 0.542399 | 8.4:-50494 | MS.gene43492:CDS |
| TCAATTCATCATCCTTGTAG+TGG | 0.542879 | 8.4:+50254 | None:intergenic |
| GCAACTTTCAGATTTCCTCT+AGG | 0.543233 | 8.4:-50397 | MS.gene43492:CDS |
| AAAATTCCTTGTCTGTCAGT+GGG | 0.547827 | 8.4:-50315 | MS.gene43492:CDS |
| GCTGTCTACAAGCATACCTA+TGG | 0.550366 | 8.4:-48433 | MS.gene43492:CDS |
| CAAGGTCGTAGTGGAGGCTA+AGG | 0.551757 | 8.4:+50657 | None:intergenic |
| CAAATGACAAATCATTTGAC+GGG | 0.553334 | 8.4:+50038 | None:intergenic |
| TTCAGGTTGGTGATGAAGGT+GGG | 0.556339 | 8.4:-47825 | MS.gene43492:intron |
| GTTTCGGATTAAGAAGAGAT+GGG | 0.558012 | 8.4:-47719 | MS.gene43492:CDS |
| AAATGAGACACGTACCCAAA+GGG | 0.561109 | 8.4:+48354 | None:intergenic |
| CAATTCATCATCCTTGTAGT+GGG | 0.563611 | 8.4:+50255 | None:intergenic |
| CGAACTCGGTGGTAATTCTG+AGG | 0.569969 | 8.4:+50813 | None:intergenic |
| GGTCCCAGATTCAAACTCAC+TGG | 0.571945 | 8.4:-50596 | MS.gene43492:CDS |
| GAAAGAGGAGGAGCAGCAGG+AGG | 0.574367 | 8.4:-50356 | MS.gene43492:CDS |
| ATATCTTGTCATTTCCGAGT+AGG | 0.574605 | 8.4:-50841 | MS.gene43492:CDS |
| TCGGTGGTAATTCTGAGGGC+AGG | 0.578370 | 8.4:+50818 | None:intergenic |
| CCCAAAGGGATGCCCAGCCA+AGG | 0.579829 | 8.4:+48368 | None:intergenic |
| GAACATACCAATCCAGCGGA+TGG | 0.588139 | 8.4:+50482 | None:intergenic |
| AAGATAATTTCAATTTGGCG+AGG | 0.598597 | 8.4:+50738 | None:intergenic |
| TGTCTGCACTGCCCACTACA+AGG | 0.599268 | 8.4:-50266 | MS.gene43492:CDS |
| TAAAGCTGGTTATGATTCGG+AGG | 0.600014 | 8.4:-48395 | MS.gene43492:CDS |
| GAAGTTAAGATACCGCTACA+AGG | 0.605149 | 8.4:-50233 | MS.gene43492:intron |
| GTTGCTAATATCGCTGACCC+CGG | 0.605885 | 8.4:-50533 | MS.gene43492:CDS |
| GTTAAGAGTTCCATTGACGT+TGG | 0.609020 | 8.4:-50617 | MS.gene43492:CDS |
| TATGAAGCTGATCTGAGGCT+CGG | 0.610187 | 8.4:+50688 | None:intergenic |
| CCATAAAATCCAATCCTCAC+CGG | 0.611947 | 8.4:-50906 | MS.gene43492:CDS |
| CATGATGTCAAGGCTCAACA+AGG | 0.612893 | 8.4:-50569 | MS.gene43492:CDS |
| GGTCTTCAAGGTCGTAGTGG+AGG | 0.622677 | 8.4:+50651 | None:intergenic |
| AAGAATCCCACTGACAGACA+AGG | 0.625574 | 8.4:+50309 | None:intergenic |
| TGTGGTCTTCAAGGTCGTAG+TGG | 0.626033 | 8.4:+50648 | None:intergenic |
| GGCAGAGGATCAACTACCGC+CGG | 0.628335 | 8.4:+50887 | None:intergenic |
| TTCGATATGAAGCTGATCTG+AGG | 0.636620 | 8.4:+50683 | None:intergenic |
| GCACCAGTGAGTTTGAATCT+GGG | 0.638299 | 8.4:+50593 | None:intergenic |
| GAACTCGGTGGTAATTCTGA+GGG | 0.640245 | 8.4:+50814 | None:intergenic |
| AGGATCAACTACCGCCGGTG+AGG | 0.644689 | 8.4:+50892 | None:intergenic |
| TTCGTTACAAGAGAAAGAGG+AGG | 0.646802 | 8.4:-50368 | MS.gene43492:CDS |
| AGCAGTAATATACCTTGTAG+CGG | 0.666629 | 8.4:+50221 | None:intergenic |
| TGTCAAGGCTCAACAAGGAG+AGG | 0.670822 | 8.4:-50564 | MS.gene43492:CDS |
| AAGATATGGTTTGTTGACGG+CGG | 0.675992 | 8.4:+50857 | None:intergenic |
| GCTTTCGCTGTCGAACTCGG+TGG | 0.680041 | 8.4:+50802 | None:intergenic |
| TTTGACGGGAGAGAAAGTAT+GGG | 0.685254 | 8.4:+50052 | None:intergenic |
| ATAGTTGAAGTGCATAGCCG+GGG | 0.690042 | 8.4:+50516 | None:intergenic |
| AAAAGAACATACCAATCCAG+CGG | 0.697521 | 8.4:+50478 | None:intergenic |
| TCAACAAGGAGAGGTTACAA+TGG | 0.698086 | 8.4:-50555 | MS.gene43492:CDS |
| TGTAACGAAACTTCACCTAG+AGG | 0.699865 | 8.4:+50382 | None:intergenic |
| TAAAATCCAATCCTCACCGG+CGG | 0.708233 | 8.4:-50903 | MS.gene43492:CDS |
| AACTCTTAACTAGAGCACTG+TGG | 0.799938 | 8.4:+50630 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGATAAAATGATAAAAAT+TGG | + | chr8.4:48467-48486 | None:intergenic | 10.0% |
| !! | TAGATAAAATGATAAAAATT+GGG | + | chr8.4:48466-48485 | None:intergenic | 10.0% |
| !!! | TTTGTTTATTTTAAATTACA+AGG | + | chr8.4:49580-49599 | None:intergenic | 10.0% |
| !! | AAATCTTAGAAAATGAAAAT+GGG | - | chr8.4:49328-49347 | MS.gene43492:intron | 15.0% |
| !! | AAATTAATGTTTCATGTAAA+AGG | + | chr8.4:49716-49735 | None:intergenic | 15.0% |
| !! | CAAAAAAAATTCAAGTAAAA+AGG | + | chr8.4:50648-50667 | None:intergenic | 15.0% |
| !! | CACAACAAATAAAAAAATTA+GGG | + | chr8.4:49647-49666 | None:intergenic | 15.0% |
| !! | TAAATCTTAGAAAATGAAAA+TGG | - | chr8.4:49327-49346 | MS.gene43492:intron | 15.0% |
| !! | TCAAATATCATAAAAGAAAA+TGG | + | chr8.4:49434-49453 | None:intergenic | 15.0% |
| !! | TCACAACAAATAAAAAAATT+AGG | + | chr8.4:49648-49667 | None:intergenic | 15.0% |
| !!! | TAAATTTTTCAAATAAATGC+AGG | - | chr8.4:48560-48579 | MS.gene43492:intron | 15.0% |
| !! | AAATAAATGAATGATAGTAG+AGG | + | chr8.4:48221-48240 | None:intergenic | 20.0% |
| !! | AAATGATTTCACAAAGTAAA+TGG | + | chr8.4:49074-49093 | None:intergenic | 20.0% |
| !! | AATAGGAAAAAATTCTTAAG+AGG | + | chr8.4:48697-48716 | None:intergenic | 20.0% |
| !! | AATGATTTCACAAAGTAAAT+GGG | + | chr8.4:49073-49092 | None:intergenic | 20.0% |
| !! | ATAATGTTATACTGAACAAA+CGG | + | chr8.4:50603-50622 | None:intergenic | 20.0% |
| !! | ATAGGAAAAAATTCTTAAGA+GGG | + | chr8.4:48696-48715 | None:intergenic | 20.0% |
| !! | ATTCTAATGAGATTATATTG+AGG | + | chr8.4:49685-49704 | None:intergenic | 20.0% |
| !! | CTGAAAAGATAATTTCAATT+TGG | + | chr8.4:47925-47944 | None:intergenic | 20.0% |
| !! | TTCTAATGAGATTATATTGA+GGG | + | chr8.4:49684-49703 | None:intergenic | 20.0% |
| !!! | AAATTTTCAGAAACTTTTAG+TGG | - | chr8.4:49458-49477 | MS.gene43492:intron | 20.0% |
| !!! | GTTAAAATTGTTTTATCAAG+TGG | - | chr8.4:48753-48772 | MS.gene43492:intron | 20.0% |
| !!! | TATTTTAAATTACAAGGAGA+TGG | + | chr8.4:49574-49593 | None:intergenic | 20.0% |
| !!! | TCTTTCTTATTTATCTCATT+GGG | + | chr8.4:49024-49043 | None:intergenic | 20.0% |
| !!! | TTCTTTCTTATTTATCTCAT+TGG | + | chr8.4:49025-49044 | None:intergenic | 20.0% |
| !!! | TTTAACATAACATTTCTAGA+TGG | + | chr8.4:48739-48758 | None:intergenic | 20.0% |
| !!! | TTTTAAAAGCCATATTAGTA+AGG | + | chr8.4:50154-50173 | None:intergenic | 20.0% |
| ! | AAAATTTACAGGAAACTTTG+TGG | + | chr8.4:47890-47909 | None:intergenic | 25.0% |
| ! | AAGAAAGAAAATGAAGAGAA+CGG | - | chr8.4:49036-49055 | MS.gene43492:intron | 25.0% |
| ! | AATTGAACTTTCATCTTCAT+TGG | + | chr8.4:50871-50890 | None:intergenic | 25.0% |
| ! | ATCATAAAAGAAAATGGTGA+AGG | + | chr8.4:49428-49447 | None:intergenic | 25.0% |
| ! | ATGATTTCACAAAGTAAATG+GGG | + | chr8.4:49072-49091 | None:intergenic | 25.0% |
| ! | ATTAGAAATGCAAAATCAAC+AGG | + | chr8.4:50379-50398 | None:intergenic | 25.0% |
| ! | CAATTGTAATAGAGAGAATA+TGG | + | chr8.4:49535-49554 | None:intergenic | 25.0% |
| ! | CACATATTATTGCAAGTAAT+AGG | + | chr8.4:48714-48733 | None:intergenic | 25.0% |
| ! | CATCATTATACTGAGAAATT+CGG | - | chr8.4:50744-50763 | MS.gene43492:CDS | 25.0% |
| ! | GAATTTCTTGAAATACAATC+TGG | - | chr8.4:48870-48889 | MS.gene43492:intron | 25.0% |
| ! | GTTATGAAGAATGTAAGTTT+AGG | + | chr8.4:49505-49524 | None:intergenic | 25.0% |
| ! | TCAAAAAATCCTTTATATGC+AGG | + | chr8.4:50539-50558 | None:intergenic | 25.0% |
| ! | TTCATCAACTACTTTACATT+TGG | - | chr8.4:49749-49768 | MS.gene43492:intron | 25.0% |
| !! | AAATTTGAAATCTTCACCAT+AGG | + | chr8.4:50241-50260 | None:intergenic | 25.0% |
| !! | ATTGCTAGCATTTTCTTTTT+TGG | - | chr8.4:49921-49940 | MS.gene43492:intron | 25.0% |
| !! | ATTTAAAGCTGGTTATGATT+CGG | - | chr8.4:50257-50276 | MS.gene43492:CDS | 25.0% |
| !! | CAAAGTTTCCTGTAAATTTT+TGG | - | chr8.4:47890-47909 | MS.gene43492:intron | 25.0% |
| !! | CTTAAAGGTCAATTTTTGAA+TGG | - | chr8.4:48366-48385 | MS.gene43492:intron | 25.0% |
| !! | GAAGATTTCAAATTTAAAGC+TGG | - | chr8.4:50246-50265 | MS.gene43492:CDS | 25.0% |
| !! | TGATTTTGCATTTCTAATTG+TGG | - | chr8.4:50381-50400 | MS.gene43492:CDS | 25.0% |
| !!! | AAAATTGTTTTATCAAGTGG+TGG | - | chr8.4:48756-48775 | MS.gene43492:intron | 25.0% |
| !!! | AATCTTCAGTTTTGATGTTT+CGG | - | chr8.4:50920-50939 | MS.gene43492:CDS | 25.0% |
| !!! | ATGGCTTTTAAAATGCTTTA+TGG | - | chr8.4:50161-50180 | MS.gene43492:intron | 25.0% |
| !!! | CTCAGTTTAACTTGATAATA+CGG | - | chr8.4:49121-49140 | MS.gene43492:intron | 25.0% |
| !!! | GTTAATTTTACTTGCTAACA+AGG | + | chr8.4:49306-49325 | None:intergenic | 25.0% |
| !!! | TATCAAAGGAGCATTTAATT+GGG | + | chr8.4:49866-49885 | None:intergenic | 25.0% |
| !!! | TCAGTTTAACTTGATAATAC+GGG | - | chr8.4:49122-49141 | MS.gene43492:intron | 25.0% |
| AAAATACCTTGTTCTCTTGT+CGG | + | chr8.4:50021-50040 | None:intergenic | 30.0% | |
| AAAATCCTTTATATGCAGGA+AGG | + | chr8.4:50535-50554 | None:intergenic | 30.0% | |
| AAATTTGTGTAGAGTAGCTT+TGG | + | chr8.4:48956-48975 | None:intergenic | 30.0% | |
| AACAGATAGTTAGTAGTGTA+TGG | + | chr8.4:50407-50426 | None:intergenic | 30.0% | |
| AAGATAATTTCAATTTGGCG+AGG | + | chr8.4:47920-47939 | None:intergenic | 30.0% | |
| AAGGTAATAAACTGAAGAGA+TGG | + | chr8.4:48498-48517 | None:intergenic | 30.0% | |
| AAGTGGAAACACCAAAATAA+GGG | + | chr8.4:50065-50084 | None:intergenic | 30.0% | |
| AATGCTTTATGGATAGTTAC+TGG | - | chr8.4:50172-50191 | MS.gene43492:intron | 30.0% | |
| ACAGATGGCATTAATGAAAT+CGG | + | chr8.4:50349-50368 | None:intergenic | 30.0% | |
| AGACGAGCTTATTATTCTAA+GGG | + | chr8.4:50131-50150 | None:intergenic | 30.0% | |
| AGATATGTTGCACTTACATT+GGG | - | chr8.4:50475-50494 | MS.gene43492:intron | 30.0% | |
| ATAGAGAGAATATGGAAGAA+AGG | + | chr8.4:49527-49546 | None:intergenic | 30.0% | |
| ATGTTTCATGTAAAAGGAGT+CGG | + | chr8.4:49710-49729 | None:intergenic | 30.0% | |
| ATTTGGCACTCATATAAGAT+TGG | - | chr8.4:48534-48553 | MS.gene43492:intron | 30.0% | |
| CAAAACAAAGAAATGTAGCA+AGG | + | chr8.4:48989-49008 | None:intergenic | 30.0% | |
| CAAATGACAAATCATTTGAC+GGG | + | chr8.4:48620-48639 | None:intergenic | 30.0% | |
| GCAAATGACAAATCATTTGA+CGG | + | chr8.4:48621-48640 | None:intergenic | 30.0% | |
| TAAGTGGAAACACCAAAATA+AGG | + | chr8.4:50066-50085 | None:intergenic | 30.0% | |
| TATGGAGCGTGTAATTATTA+GGG | + | chr8.4:47734-47753 | None:intergenic | 30.0% | |
| TGTAGTTGATTACTATGTGT+TGG | + | chr8.4:49776-49795 | None:intergenic | 30.0% | |
| TTATGGAGCGTGTAATTATT+AGG | + | chr8.4:47735-47754 | None:intergenic | 30.0% | |
| ! | AAATACCTATAGAGCATCTT+TGG | + | chr8.4:50098-50117 | None:intergenic | 30.0% |
| ! | GAAGATTTTATGTCATCTTG+TGG | + | chr8.4:50907-50926 | None:intergenic | 30.0% |
| ! | TCTTTTCAGAACAACAGTAA+AGG | - | chr8.4:47936-47955 | MS.gene43492:intron | 30.0% |
| !! | ATCAAAGGAGCATTTAATTG+GGG | + | chr8.4:49865-49884 | None:intergenic | 30.0% |
| !! | CAGTTTAACTTGATAATACG+GGG | - | chr8.4:49123-49142 | MS.gene43492:intron | 30.0% |
| !! | CTATCAAAGGAGCATTTAAT+TGG | + | chr8.4:49867-49886 | None:intergenic | 30.0% |
| !! | GCAATCAATTACTTTTAGGT+TGG | + | chr8.4:49906-49925 | None:intergenic | 30.0% |
| !! | GCTAGCAATCAATTACTTTT+AGG | + | chr8.4:49910-49929 | None:intergenic | 30.0% |
| !! | TACTAACTATCTGTTGCTTT+GGG | - | chr8.4:50412-50431 | MS.gene43492:intron | 30.0% |
| !!! | AGCATTTTCTTTTTTGGCTA+TGG | - | chr8.4:49927-49946 | MS.gene43492:intron | 30.0% |
| !!! | GAACAATTGTCTGCATTTTT+TGG | + | chr8.4:49263-49282 | None:intergenic | 30.0% |
| !!! | TGAGCACGTATTTTTAGAAA+AGG | + | chr8.4:49105-49124 | None:intergenic | 30.0% |
| AAAAATTCCTTGTCTGTCAG+TGG | - | chr8.4:48339-48358 | MS.gene43492:intron | 35.0% | |
| AAAAGAACATACCAATCCAG+CGG | + | chr8.4:48180-48199 | None:intergenic | 35.0% | |
| AAAATTCCTTGTCTGTCAGT+GGG | - | chr8.4:48340-48359 | MS.gene43492:intron | 35.0% | |
| AAGAAAGAAAATACAGCCTC+AGG | - | chr8.4:48899-48918 | MS.gene43492:intron | 35.0% | |
| AATAACTACTCAAGCAGCTA+AGG | + | chr8.4:48517-48536 | None:intergenic | 35.0% | |
| ACAATTGCGATTCGAACTAT+TGG | - | chr8.4:50196-50215 | MS.gene43492:intron | 35.0% | |
| AGCAGTAATATACCTTGTAG+CGG | + | chr8.4:48437-48456 | None:intergenic | 35.0% | |
| AGTTTCGTTACAAGAGAAAG+AGG | - | chr8.4:48284-48303 | MS.gene43492:intron | 35.0% | |
| ATGAAGAGAACGGAAAATTG+AGG | - | chr8.4:49046-49065 | MS.gene43492:intron | 35.0% | |
| CAATTCATCATCCTTGTAGT+GGG | + | chr8.4:48403-48422 | None:intergenic | 35.0% | |
| CAGTAAGTGTATGCTATCAA+AGG | + | chr8.4:49880-49899 | None:intergenic | 35.0% | |
| CATCTTCTCTTCATCACAAT+GGG | + | chr8.4:49173-49192 | None:intergenic | 35.0% | |
| CGTGTAATTATTAGGGTTTC+CGG | + | chr8.4:47727-47746 | None:intergenic | 35.0% | |
| GAGACGAGCTTATTATTCTA+AGG | + | chr8.4:50132-50151 | None:intergenic | 35.0% | |
| GAGATATGTTGCACTTACAT+TGG | - | chr8.4:50474-50493 | MS.gene43492:intron | 35.0% | |
| GGCATTAATGAAATCGGTTA+TGG | + | chr8.4:50343-50362 | None:intergenic | 35.0% | |
| GTTTCGGATTAAGAAGAGAT+GGG | - | chr8.4:50936-50955 | MS.gene43492:CDS | 35.0% | |
| TACTCGGAAATGACAAGATA+TGG | + | chr8.4:47815-47834 | None:intergenic | 35.0% | |
| TAGCTGCTTGAGTAGTTATT+TGG | - | chr8.4:48517-48536 | MS.gene43492:intron | 35.0% | |
| TCAATTCATCATCCTTGTAG+TGG | + | chr8.4:48404-48423 | None:intergenic | 35.0% | |
| TCATCTTCTCTTCATCACAA+TGG | + | chr8.4:49174-49193 | None:intergenic | 35.0% | |
| TCCAATGAAGAGACAAACAA+AGG | + | chr8.4:49967-49986 | None:intergenic | 35.0% | |
| TGTTTCGGATTAAGAAGAGA+TGG | - | chr8.4:50935-50954 | MS.gene43492:CDS | 35.0% | |
| ! | ATATCTTGTCATTTCCGAGT+AGG | - | chr8.4:47814-47833 | MS.gene43492:CDS | 35.0% |
| ! | CTACTAACTATCTGTTGCTT+TGG | - | chr8.4:50411-50430 | MS.gene43492:intron | 35.0% |
| ! | TCCTTTGTTTGTCTCTTCAT+TGG | - | chr8.4:49963-49982 | MS.gene43492:intron | 35.0% |
| ! | TTGGTCTTTCTGACAAGTTA+AGG | - | chr8.4:48655-48674 | MS.gene43492:intron | 35.0% |
| !! | ACTCATTTGAGCCCTTATTT+TGG | - | chr8.4:50051-50070 | MS.gene43492:CDS | 35.0% |
| !! | AGACACATATTGATGGGTTA+GGG | - | chr8.4:49993-50012 | MS.gene43492:intron | 35.0% |
| !! | GACAAGAGAACAAGGTATTT+TGG | - | chr8.4:50020-50039 | MS.gene43492:CDS | 35.0% |
| !! | GACAAGATATGGTTTGTTGA+CGG | + | chr8.4:47804-47823 | None:intergenic | 35.0% |
| !! | GGAAATCTGAAAGTTGCTTT+TGG | + | chr8.4:48255-48274 | None:intergenic | 35.0% |
| !!! | CTTTTTTGGCTATGGTTTGT+GGG | - | chr8.4:49935-49954 | MS.gene43492:intron | 35.0% |
| !!! | TCTTTTTTGGCTATGGTTTG+TGG | - | chr8.4:49934-49953 | MS.gene43492:intron | 35.0% |
| AAAATACAGCCTCAGGAAGT+AGG | - | chr8.4:48906-48925 | MS.gene43492:intron | 40.0% | |
| AAAATGAGACACGTACCCAA+AGG | + | chr8.4:50305-50324 | None:intergenic | 40.0% | |
| AAATGAGACACGTACCCAAA+GGG | + | chr8.4:50304-50323 | None:intergenic | 40.0% | |
| AGAGTGGAGACACATATTGA+TGG | - | chr8.4:49986-50005 | MS.gene43492:intron | 40.0% | |
| AGCTCGTCTCCTTACTAATA+TGG | - | chr8.4:50142-50161 | MS.gene43492:intron | 40.0% | |
| ATTTGACGGGAGAGAAAGTA+TGG | + | chr8.4:48607-48626 | None:intergenic | 40.0% | |
| CCATAAAATCCAATCCTCAC+CGG | - | chr8.4:47749-47768 | MS.gene43492:CDS | 40.0% | |
| GAAGTTAAGATACCGCTACA+AGG | - | chr8.4:48422-48441 | MS.gene43492:CDS | 40.0% | |
| GAGGCTGTCCAAAAATTTAC+AGG | + | chr8.4:47901-47920 | None:intergenic | 40.0% | |
| GAGTGGAGACACATATTGAT+GGG | - | chr8.4:49987-50006 | MS.gene43492:intron | 40.0% | |
| GCAACTTTCAGATTTCCTCT+AGG | - | chr8.4:48258-48277 | MS.gene43492:intron | 40.0% | |
| GTTAAGAGTTCCATTGACGT+TGG | - | chr8.4:48038-48057 | MS.gene43492:intron | 40.0% | |
| TAGATTATGCAGCAACCAGT+TGG | + | chr8.4:49808-49827 | None:intergenic | 40.0% | |
| TCAACAAGGAGAGGTTACAA+TGG | - | chr8.4:48100-48119 | MS.gene43492:intron | 40.0% | |
| TCTGTCAGTGGGATTCTTAA+AGG | - | chr8.4:48351-48370 | MS.gene43492:intron | 40.0% | |
| TCTTTGGCCAAAAAGGTAAG+TGG | + | chr8.4:50082-50101 | None:intergenic | 40.0% | |
| TGATAGTTGAAGTGCATAGC+CGG | + | chr8.4:48144-48163 | None:intergenic | 40.0% | |
| TGCTTCCTTCCTGCATATAA+AGG | - | chr8.4:50527-50546 | MS.gene43492:CDS | 40.0% | |
| TGTAACGAAACTTCACCTAG+AGG | + | chr8.4:48276-48295 | None:intergenic | 40.0% | |
| TTCGATATGAAGCTGATCTG+AGG | + | chr8.4:47975-47994 | None:intergenic | 40.0% | |
| TTCGTTACAAGAGAAAGAGG+AGG | - | chr8.4:48287-48306 | MS.gene43492:intron | 40.0% | |
| TTTGGCCAAAGATGCTCTAT+AGG | - | chr8.4:50090-50109 | MS.gene43492:intron | 40.0% | |
| TTTGTCTCTTCATTGGAGAG+TGG | - | chr8.4:49970-49989 | MS.gene43492:intron | 40.0% | |
| ! | AACTTGATAATACGGGGATG+TGG | - | chr8.4:49129-49148 | MS.gene43492:intron | 40.0% |
| ! | ACTTGATAATACGGGGATGT+GGG | - | chr8.4:49130-49149 | MS.gene43492:intron | 40.0% |
| ! | GGTGTTTCCACTTACCTTTT+TGG | - | chr8.4:50072-50091 | MS.gene43492:CDS | 40.0% |
| ! | TAAAGCTGGTTATGATTCGG+AGG | - | chr8.4:50260-50279 | MS.gene43492:CDS | 40.0% |
| ! | TAGAGCATCTTTGGCCAAAA+AGG | + | chr8.4:50089-50108 | None:intergenic | 40.0% |
| ! | TTTGACGGGAGAGAAAGTAT+GGG | + | chr8.4:48606-48625 | None:intergenic | 40.0% |
| !! | AACTCTTAACTAGAGCACTG+TGG | + | chr8.4:48028-48047 | None:intergenic | 40.0% |
| !! | AAGATATGGTTTGTTGACGG+CGG | + | chr8.4:47801-47820 | None:intergenic | 40.0% |
| !! | GAGACACATATTGATGGGTT+AGG | - | chr8.4:49992-50011 | MS.gene43492:intron | 40.0% |
| !! | TAACTATCTGTTGCTTTGGG+TGG | - | chr8.4:50415-50434 | MS.gene43492:intron | 40.0% |
| !! | TCAACAGGAGTATTCACAGA+TGG | + | chr8.4:50364-50383 | None:intergenic | 40.0% |
| !! | TGTGTAGAGTAGCTTTGGAT+GGG | + | chr8.4:48951-48970 | None:intergenic | 40.0% |
| !! | TTGTGTAGAGTAGCTTTGGA+TGG | + | chr8.4:48952-48971 | None:intergenic | 40.0% |
| AAGAATCCCACTGACAGACA+AGG | + | chr8.4:48349-48368 | None:intergenic | 45.0% | |
| AAGACCAAACCTACGCTTGA+AGG | + | chr8.4:48643-48662 | None:intergenic | 45.0% | |
| ACTACAATGCAAGCACCAAC+TGG | - | chr8.4:49790-49809 | MS.gene43492:intron | 45.0% | |
| AGCACCAGTGAGTTTGAATC+TGG | + | chr8.4:48066-48085 | None:intergenic | 45.0% | |
| AGGGCTCAAATGAGTGTCTT+AGG | + | chr8.4:50046-50065 | None:intergenic | 45.0% | |
| ATAGTTGAAGTGCATAGCCG+GGG | + | chr8.4:48142-48161 | None:intergenic | 45.0% | |
| CATGATGTCAAGGCTCAACA+AGG | - | chr8.4:48086-48105 | MS.gene43492:intron | 45.0% | |
| GATAGTTGAAGTGCATAGCC+GGG | + | chr8.4:48143-48162 | None:intergenic | 45.0% | |
| GCACCAGTGAGTTTGAATCT+GGG | + | chr8.4:48065-48084 | None:intergenic | 45.0% | |
| GCTGTCTACAAGCATACCTA+TGG | - | chr8.4:50222-50241 | MS.gene43492:intron | 45.0% | |
| TAAAATCCAATCCTCACCGG+CGG | - | chr8.4:47752-47771 | MS.gene43492:CDS | 45.0% | |
| TTGTTCCTACCTACTTCCTG+AGG | + | chr8.4:48918-48937 | None:intergenic | 45.0% | |
| TTTGCCTTCAAGCGTAGGTT+TGG | - | chr8.4:48636-48655 | MS.gene43492:intron | 45.0% | |
| ! | CACATTAGCTTCCTTCAGGT+TGG | - | chr8.4:50817-50836 | MS.gene43492:CDS | 45.0% |
| ! | CCGGTGAGGATTGGATTTTA+TGG | + | chr8.4:47752-47771 | None:intergenic | 45.0% |
| ! | CTTGATAATACGGGGATGTG+GGG | - | chr8.4:49131-49150 | MS.gene43492:intron | 45.0% |
| ! | GAACTCGGTGGTAATTCTGA+GGG | + | chr8.4:47844-47863 | None:intergenic | 45.0% |
| ! | GACACACATTAGCTTCCTTC+AGG | - | chr8.4:50813-50832 | MS.gene43492:CDS | 45.0% |
| ! | TATGAAGCTGATCTGAGGCT+CGG | + | chr8.4:47970-47989 | None:intergenic | 45.0% |
| ! | TGTCATTTGCCTTCAAGCGT+AGG | - | chr8.4:48631-48650 | MS.gene43492:intron | 45.0% |
| !! | TTCAGGTTGGTGATGAAGGT+GGG | - | chr8.4:50830-50849 | MS.gene43492:CDS | 45.0% |
| !! | TTCCTTCAGGTTGGTGATGA+AGG | - | chr8.4:50826-50845 | MS.gene43492:CDS | 45.0% |
| CACCTTCATCACCAACCTGA+AGG | + | chr8.4:50831-50850 | None:intergenic | 50.0% | |
| CACTGGTGCTCATGATGTCA+AGG | - | chr8.4:48076-48095 | MS.gene43492:intron | 50.0% | |
| GAACATACCAATCCAGCGGA+TGG | + | chr8.4:48176-48195 | None:intergenic | 50.0% | |
| GGTCCCAGATTCAAACTCAC+TGG | - | chr8.4:48059-48078 | MS.gene43492:intron | 50.0% | |
| GTTGCTAATATCGCTGACCC+CGG | - | chr8.4:48122-48141 | MS.gene43492:intron | 50.0% | |
| TACAGCCTCAGGAAGTAGGT+AGG | - | chr8.4:48910-48929 | MS.gene43492:intron | 50.0% | |
| TGTCAAGGCTCAACAAGGAG+AGG | - | chr8.4:48091-48110 | MS.gene43492:intron | 50.0% | |
| TGTGGTCTTCAAGGTCGTAG+TGG | + | chr8.4:48010-48029 | None:intergenic | 50.0% | |
| ! | CGAACTCGGTGGTAATTCTG+AGG | + | chr8.4:47845-47864 | None:intergenic | 50.0% |
| ! | GAATCTGGGACCAACGTCAA+TGG | + | chr8.4:48051-48070 | None:intergenic | 50.0% |
| ! | TATGATTCGGAGGTTCGCCT+TGG | - | chr8.4:50270-50289 | MS.gene43492:CDS | 50.0% |
| !! | ATATGGTTTGTTGACGGCGG+CGG | + | chr8.4:47798-47817 | None:intergenic | 50.0% |
| !! | CTAGAGCACTGTGGTCTTCA+AGG | + | chr8.4:48019-48038 | None:intergenic | 50.0% |
| !! | CTTCAGGTTGGTGATGAAGG+TGG | - | chr8.4:50829-50848 | MS.gene43492:CDS | 50.0% |
| ACCAATCCAGCGGATGGAAG+TGG | + | chr8.4:48170-48189 | None:intergenic | 55.0% | |
| AGAGAAAGAGGAGGAGCAGC+AGG | - | chr8.4:48296-48315 | MS.gene43492:intron | 55.0% | |
| GGTCTTCAAGGTCGTAGTGG+AGG | + | chr8.4:48007-48026 | None:intergenic | 55.0% | |
| TGCGCTTTCGCTGTCGAACT+CGG | + | chr8.4:47859-47878 | None:intergenic | 55.0% | |
| TGTCTGCACTGCCCACTACA+AGG | - | chr8.4:48389-48408 | MS.gene43492:CDS | 55.0% | |
| ! | ATTCTGAGGGCAGGCCTACT+CGG | + | chr8.4:47831-47850 | None:intergenic | 55.0% |
| ! | CAAGGTCGTAGTGGAGGCTA+AGG | + | chr8.4:48001-48020 | None:intergenic | 55.0% |
| ! | TCGGTGGTAATTCTGAGGGC+AGG | + | chr8.4:47840-47859 | None:intergenic | 55.0% |
| !! | AGGGCACCGACAAGAGAACA+AGG | - | chr8.4:50012-50031 | MS.gene43492:CDS | 55.0% |
| AGGATCAACTACCGCCGGTG+AGG | + | chr8.4:47766-47785 | None:intergenic | 60.0% | |
| ATTCGGAGGTTCGCCTTGGC+TGG | - | chr8.4:50274-50293 | MS.gene43492:CDS | 60.0% | |
| CAACTACCGCCGGTGAGGAT+TGG | + | chr8.4:47761-47780 | None:intergenic | 60.0% | |
| CCTTGGCTGGGCATCCCTTT+GGG | - | chr8.4:50287-50306 | MS.gene43492:CDS | 60.0% | |
| GAAAGAGGAGGAGCAGCAGG+AGG | - | chr8.4:48299-48318 | MS.gene43492:intron | 60.0% | |
| GCCACTTCCATCCGCTGGAT+TGG | - | chr8.4:48166-48185 | MS.gene43492:intron | 60.0% | |
| GCTTTCGCTGTCGAACTCGG+TGG | + | chr8.4:47856-47875 | None:intergenic | 60.0% | |
| GGCAGAGGATCAACTACCGC+CGG | + | chr8.4:47771-47790 | None:intergenic | 60.0% | |
| TCAACGCCACTTCCATCCGC+TGG | - | chr8.4:48161-48180 | MS.gene43492:intron | 60.0% | |
| TTCGGAGGTTCGCCTTGGCT+GGG | - | chr8.4:50275-50294 | MS.gene43492:CDS | 60.0% | |
| AGAGGAGGAGCAGCAGGAGG+AGG | - | chr8.4:48302-48321 | MS.gene43492:intron | 65.0% | |
| CCCAAAGGGATGCCCAGCCA+AGG | + | chr8.4:50290-50309 | None:intergenic | 65.0% | |
| GCCTTGGCTGGGCATCCCTT+TGG | - | chr8.4:50286-50305 | MS.gene43492:CDS | 65.0% | |
| !! | TGGTTTGTTGACGGCGGCGG+CGG | + | chr8.4:47795-47814 | None:intergenic | 65.0% |
| TTTGTTGACGGCGGCGGCGG+CGG | + | chr8.4:47792-47811 | None:intergenic | 70.0% | |
| ! | GACGGCGGCGGCGGCGGCAG+AGG | + | chr8.4:47786-47805 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 47711 | 50966 | 47711 | ID=MS.gene43492 |
| chr8.4 | mRNA | 47711 | 50966 | 47711 | ID=MS.gene43492.t1;Parent=MS.gene43492 |
| chr8.4 | exon | 50490 | 50966 | 50490 | ID=MS.gene43492.t1.exon1;Parent=MS.gene43492.t1 |
| chr8.4 | CDS | 50490 | 50966 | 50490 | ID=cds.MS.gene43492.t1;Parent=MS.gene43492.t1 |
| chr8.4 | exon | 50234 | 50425 | 50234 | ID=MS.gene43492.t1.exon2;Parent=MS.gene43492.t1 |
| chr8.4 | CDS | 50234 | 50425 | 50234 | ID=cds.MS.gene43492.t1;Parent=MS.gene43492.t1 |
| chr8.4 | exon | 50001 | 50095 | 50001 | ID=MS.gene43492.t1.exon3;Parent=MS.gene43492.t1 |
| chr8.4 | CDS | 50001 | 50095 | 50001 | ID=cds.MS.gene43492.t1;Parent=MS.gene43492.t1 |
| chr8.4 | exon | 48369 | 48489 | 48369 | ID=MS.gene43492.t1.exon4;Parent=MS.gene43492.t1 |
| chr8.4 | CDS | 48369 | 48489 | 48369 | ID=cds.MS.gene43492.t1;Parent=MS.gene43492.t1 |
| chr8.4 | exon | 47711 | 47842 | 47711 | ID=MS.gene43492.t1.exon5;Parent=MS.gene43492.t1 |
| chr8.4 | CDS | 47711 | 47842 | 47711 | ID=cds.MS.gene43492.t1;Parent=MS.gene43492.t1 |
| Gene Sequence |
| Protein sequence |
