Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43660.t1 | XP_003615440.1 | 98.5 | 534 | 8 | 0 | 1 | 534 | 1 | 534 | 2.00E-293 | 1017.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43660.t1 | Q9ASX5 | 79.1 | 535 | 107 | 4 | 1 | 532 | 1 | 533 | 1.0e-234 | 813.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43660.t1 | G7KD96 | 98.5 | 534 | 8 | 0 | 1 | 534 | 1 | 534 | 1.4e-293 | 1017.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene43660 | 0.833373 | 5.54E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene43660 | 0.864404 | 1.25E-64 | -1.69E-46 |
| MS.gene049232 | MS.gene43660 | 0.80752 | 4.86E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene43660 | 0.836301 | 1.01E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene43660 | 0.810034 | 1.41E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene43660 | 0.838723 | 2.43E-57 | -1.69E-46 |
| MS.gene049633 | MS.gene43660 | 0.862214 | 5.94E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene43660 | 0.806234 | 9.08E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene43660 | 0.816116 | 6.53E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene43660 | 0.86129 | 1.14E-63 | -1.69E-46 |
| MS.gene050323 | MS.gene43660 | 0.858502 | 7.88E-63 | -1.69E-46 |
| MS.gene050444 | MS.gene43660 | 0.81444 | 1.54E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene43660 | 0.857731 | 1.34E-62 | -1.69E-46 |
| MS.gene050504 | MS.gene43660 | 0.83822 | 3.27E-57 | -1.69E-46 |
| MS.gene050518 | MS.gene43660 | 0.822977 | 1.77E-53 | -1.69E-46 |
| MS.gene050520 | MS.gene43660 | 0.805531 | 1.28E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene43660 | 0.819238 | 1.29E-52 | -1.69E-46 |
| MS.gene050553 | MS.gene43660 | 0.800478 | 1.41E-48 | -1.69E-46 |
| MS.gene050577 | MS.gene43660 | 0.819943 | 8.91E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene43660 | 0.843584 | 1.28E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene43660 | 0.834046 | 3.76E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene43660 | 0.847902 | 8.62E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene43660 | 0.833243 | 5.96E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene43660 | 0.874858 | 4.86E-68 | -1.69E-46 |
| MS.gene050772 | MS.gene43660 | 0.843006 | 1.83E-58 | -1.69E-46 |
| MS.gene05080 | MS.gene43660 | 0.863263 | 2.82E-64 | -1.69E-46 |
| MS.gene05081 | MS.gene43660 | 0.82717 | 1.81E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene43660 | 0.862975 | 3.46E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene43660 | 0.861035 | 1.36E-63 | -1.69E-46 |
| MS.gene050876 | MS.gene43660 | 0.803811 | 2.92E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene43660 | 0.855064 | 8.10E-62 | -1.69E-46 |
| MS.gene050950 | MS.gene43660 | 0.874998 | 4.36E-68 | -1.69E-46 |
| MS.gene050986 | MS.gene43660 | 0.822338 | 2.50E-53 | -1.69E-46 |
| MS.gene051268 | MS.gene43660 | 0.820202 | 7.77E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene43660 | 0.866694 | 2.36E-65 | -1.69E-46 |
| MS.gene051387 | MS.gene43660 | 0.839734 | 1.33E-57 | -1.69E-46 |
| MS.gene051617 | MS.gene43660 | 0.804863 | 1.76E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene43660 | 0.877651 | 5.30E-69 | -1.69E-46 |
| MS.gene051874 | MS.gene43660 | 0.808972 | 2.38E-50 | -1.69E-46 |
| MS.gene051941 | MS.gene43660 | 0.83371 | 4.56E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene43660 | 0.801032 | 1.09E-48 | -1.69E-46 |
| MS.gene052346 | MS.gene43660 | 0.813284 | 2.77E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene43660 | 0.821431 | 4.05E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene43660 | 0.82391 | 1.07E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene43660 | 0.813215 | 2.86E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene43660 | 0.828722 | 7.68E-55 | -1.69E-46 |
| MS.gene052822 | MS.gene43660 | 0.812964 | 3.25E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene43660 | 0.816491 | 5.38E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene43660 | 0.82219 | 2.71E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene43660 | 0.837695 | 4.47E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene43660 | 0.845785 | 3.27E-59 | -1.69E-46 |
| MS.gene052966 | MS.gene43660 | 0.880868 | 3.85E-70 | -1.69E-46 |
| MS.gene053203 | MS.gene43660 | 0.852288 | 5.09E-61 | -1.69E-46 |
| MS.gene053207 | MS.gene43660 | 0.827111 | 1.87E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene43660 | 0.824417 | 8.16E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene43660 | 0.825904 | 3.63E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene43660 | 0.819582 | 1.08E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene43660 | 0.891991 | 2.40E-74 | -1.69E-46 |
| MS.gene053480 | MS.gene43660 | 0.82405 | 9.96E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene43660 | 0.832763 | 7.85E-56 | -1.69E-46 |
| MS.gene053579 | MS.gene43660 | 0.822369 | 2.46E-53 | -1.69E-46 |
| MS.gene053633 | MS.gene43660 | 0.808526 | 2.97E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene43660 | 0.877517 | 5.90E-69 | -1.69E-46 |
| MS.gene053916 | MS.gene43660 | 0.806944 | 6.43E-50 | -1.69E-46 |
| MS.gene054107 | MS.gene43660 | 0.830062 | 3.63E-55 | -1.69E-46 |
| MS.gene054344 | MS.gene43660 | 0.805368 | 1.38E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene43660 | 0.8402 | 1.00E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene43660 | 0.838015 | 3.70E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene43660 | 0.844824 | 5.95E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene43660 | 0.814045 | 1.88E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene43660 | 0.806178 | 9.33E-50 | -1.69E-46 |
| MS.gene054884 | MS.gene43660 | -0.809598 | 1.75E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene43660 | 0.850198 | 1.98E-60 | -1.69E-46 |
| MS.gene054954 | MS.gene43660 | 0.818119 | 2.31E-52 | -1.69E-46 |
| MS.gene055158 | MS.gene43660 | -0.808502 | 3.00E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene43660 | 0.825901 | 3.64E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene43660 | 0.857343 | 1.74E-62 | -1.69E-46 |
| MS.gene055362 | MS.gene43660 | 0.818623 | 1.78E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene43660 | 0.844892 | 5.71E-59 | -1.69E-46 |
| MS.gene055539 | MS.gene43660 | 0.833004 | 6.84E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene43660 | 0.88846 | 5.79E-73 | -1.69E-46 |
| MS.gene055722 | MS.gene43660 | 0.800959 | 1.13E-48 | -1.69E-46 |
| MS.gene055741 | MS.gene43660 | 0.832698 | 8.15E-56 | -1.69E-46 |
| MS.gene055744 | MS.gene43660 | 0.821467 | 3.98E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene43660 | 0.865272 | 6.66E-65 | -1.69E-46 |
| MS.gene055750 | MS.gene43660 | 0.865093 | 7.58E-65 | -1.69E-46 |
| MS.gene055751 | MS.gene43660 | 0.859395 | 4.26E-63 | -1.69E-46 |
| MS.gene05589 | MS.gene43660 | 0.84608 | 2.72E-59 | -1.69E-46 |
| MS.gene055941 | MS.gene43660 | 0.877076 | 8.40E-69 | -1.69E-46 |
| MS.gene056040 | MS.gene43660 | 0.809144 | 2.19E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene43660 | 0.806141 | 9.50E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene43660 | 0.811575 | 6.54E-51 | -1.69E-46 |
| MS.gene056446 | MS.gene43660 | 0.818237 | 2.18E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene43660 | 0.84499 | 5.37E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene43660 | 0.859117 | 5.16E-63 | -1.69E-46 |
| MS.gene056657 | MS.gene43660 | 0.824737 | 6.87E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene43660 | 0.828519 | 8.60E-55 | -1.69E-46 |
| MS.gene056877 | MS.gene43660 | 0.859424 | 4.18E-63 | -1.69E-46 |
| MS.gene056947 | MS.gene43660 | 0.819893 | 9.14E-53 | -1.69E-46 |
| MS.gene057019 | MS.gene43660 | 0.824131 | 9.53E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene43660 | 0.833665 | 4.68E-56 | -1.69E-46 |
| MS.gene057086 | MS.gene43660 | 0.804184 | 2.44E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene43660 | 0.840972 | 6.30E-58 | -1.69E-46 |
| MS.gene057332 | MS.gene43660 | 0.845157 | 4.84E-59 | -1.69E-46 |
| MS.gene057416 | MS.gene43660 | 0.814188 | 1.75E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene43660 | 0.82749 | 1.52E-54 | -1.69E-46 |
| MS.gene057734 | MS.gene43660 | 0.808551 | 2.93E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene43660 | 0.843913 | 1.05E-58 | -1.69E-46 |
| MS.gene05787 | MS.gene43660 | 0.831122 | 2.00E-55 | -1.69E-46 |
| MS.gene058120 | MS.gene43660 | 0.822997 | 1.76E-53 | -1.69E-46 |
| MS.gene058130 | MS.gene43660 | 0.817868 | 2.64E-52 | -1.69E-46 |
| MS.gene058323 | MS.gene43660 | 0.812906 | 3.35E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene43660 | -0.800737 | 1.25E-48 | -1.69E-46 |
| MS.gene058338 | MS.gene43660 | 0.817494 | 3.20E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene43660 | 0.901511 | 2.49E-78 | -1.69E-46 |
| MS.gene058418 | MS.gene43660 | -0.822709 | 2.05E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene43660 | 0.813702 | 2.24E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene43660 | 0.822187 | 2.71E-53 | -1.69E-46 |
| MS.gene058700 | MS.gene43660 | 0.846492 | 2.10E-59 | -1.69E-46 |
| MS.gene058773 | MS.gene43660 | 0.846048 | 2.77E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene43660 | 0.855266 | 7.08E-62 | -1.69E-46 |
| MS.gene058948 | MS.gene43660 | 0.820308 | 7.35E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene43660 | 0.809891 | 1.51E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene43660 | 0.885998 | 5.01E-72 | -1.69E-46 |
| MS.gene05914 | MS.gene43660 | 0.806227 | 9.11E-50 | -1.69E-46 |
| MS.gene059305 | MS.gene43660 | 0.838932 | 2.14E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene43660 | 0.811589 | 6.49E-51 | -1.69E-46 |
| MS.gene059526 | MS.gene43660 | -0.805157 | 1.53E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene43660 | 0.816995 | 4.15E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene43660 | 0.81558 | 8.59E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene43660 | 0.847565 | 1.07E-59 | -1.69E-46 |
| MS.gene059756 | MS.gene43660 | 0.81982 | 9.50E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene43660 | 0.835311 | 1.81E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene43660 | 0.822963 | 1.79E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene43660 | 0.860264 | 2.33E-63 | -1.69E-46 |
| MS.gene06027 | MS.gene43660 | 0.824059 | 9.91E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene43660 | 0.810462 | 1.14E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene43660 | 0.844883 | 5.74E-59 | -1.69E-46 |
| MS.gene060778 | MS.gene43660 | 0.818477 | 1.92E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene43660 | 0.838273 | 3.17E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene43660 | 0.837155 | 6.14E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene43660 | 0.858929 | 5.88E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene43660 | 0.871061 | 9.11E-67 | -1.69E-46 |
| MS.gene061150 | MS.gene43660 | 0.83616 | 1.10E-56 | -1.69E-46 |
| MS.gene061231 | MS.gene43660 | 0.814345 | 1.62E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43660.t1 | MTR_5g068050 | 98.502 | 534 | 8 | 0 | 1 | 534 | 1 | 534 | 0.0 | 1081 |
| MS.gene43660.t1 | MTR_3g094740 | 28.856 | 402 | 271 | 7 | 127 | 519 | 206 | 601 | 4.49e-46 | 172 |
| MS.gene43660.t1 | MTR_3g094740 | 28.642 | 405 | 268 | 8 | 127 | 519 | 206 | 601 | 6.45e-46 | 172 |
| MS.gene43660.t1 | MTR_8g091710 | 28.218 | 404 | 271 | 8 | 127 | 519 | 197 | 592 | 3.94e-45 | 169 |
| MS.gene43660.t1 | MTR_1g009860 | 26.786 | 392 | 261 | 2 | 128 | 519 | 134 | 499 | 6.89e-38 | 147 |
| MS.gene43660.t1 | MTR_1g009860 | 26.786 | 392 | 261 | 2 | 128 | 519 | 134 | 499 | 1.39e-37 | 147 |
| MS.gene43660.t1 | MTR_4g104070 | 31.274 | 259 | 164 | 5 | 135 | 383 | 78 | 332 | 9.19e-37 | 142 |
| MS.gene43660.t1 | MTR_4g026450 | 24.936 | 393 | 264 | 4 | 128 | 518 | 155 | 518 | 1.30e-35 | 142 |
| MS.gene43660.t1 | MTR_6g038750 | 29.299 | 314 | 199 | 5 | 128 | 436 | 132 | 427 | 1.10e-34 | 139 |
| MS.gene43660.t1 | MTR_1g095480 | 25.785 | 446 | 259 | 10 | 82 | 505 | 170 | 565 | 7.25e-32 | 130 |
| MS.gene43660.t1 | MTR_3g082750 | 29.392 | 296 | 198 | 4 | 127 | 418 | 203 | 491 | 7.72e-32 | 130 |
| MS.gene43660.t1 | MTR_1g095480 | 25.785 | 446 | 259 | 10 | 82 | 505 | 170 | 565 | 9.80e-32 | 130 |
| MS.gene43660.t1 | MTR_1g046620 | 25.401 | 374 | 248 | 6 | 128 | 501 | 187 | 529 | 2.08e-31 | 129 |
| MS.gene43660.t1 | MTR_0053s0030 | 25.445 | 393 | 262 | 4 | 128 | 518 | 143 | 506 | 2.42e-30 | 125 |
| MS.gene43660.t1 | MTR_3g105760 | 23.711 | 388 | 262 | 7 | 140 | 519 | 136 | 497 | 3.28e-28 | 119 |
| MS.gene43660.t1 | MTR_5g077080 | 31.855 | 248 | 161 | 5 | 130 | 377 | 89 | 328 | 3.42e-28 | 118 |
| MS.gene43660.t1 | MTR_3g070410 | 30.255 | 314 | 184 | 11 | 119 | 406 | 81 | 385 | 1.80e-26 | 114 |
| MS.gene43660.t1 | MTR_1g008980 | 25.828 | 302 | 200 | 8 | 130 | 417 | 56 | 347 | 1.92e-22 | 102 |
| MS.gene43660.t1 | MTR_4g091510 | 25.978 | 358 | 227 | 9 | 126 | 459 | 211 | 554 | 3.87e-22 | 100 |
| MS.gene43660.t1 | MTR_4g091510 | 25.978 | 358 | 227 | 9 | 126 | 459 | 216 | 559 | 3.99e-22 | 100 |
| MS.gene43660.t1 | MTR_2g011640 | 25.364 | 343 | 230 | 8 | 126 | 447 | 264 | 601 | 1.78e-20 | 95.5 |
| MS.gene43660.t1 | MTR_8g464860 | 23.099 | 342 | 225 | 8 | 134 | 447 | 216 | 547 | 3.90e-17 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43660.t1 | AT5G05200 | 79.065 | 535 | 107 | 4 | 1 | 532 | 1 | 533 | 0.0 | 867 |
| MS.gene43660.t1 | AT5G64940 | 27.901 | 405 | 273 | 9 | 127 | 519 | 221 | 618 | 2.56e-42 | 162 |
| MS.gene43660.t1 | AT5G64940 | 27.901 | 405 | 273 | 9 | 127 | 519 | 221 | 618 | 2.56e-42 | 162 |
| MS.gene43660.t1 | AT4G24810 | 33.591 | 259 | 158 | 5 | 135 | 383 | 32 | 286 | 6.40e-41 | 150 |
| MS.gene43660.t1 | AT4G24810 | 33.591 | 259 | 158 | 5 | 135 | 383 | 32 | 286 | 6.63e-41 | 150 |
| MS.gene43660.t1 | AT4G31390 | 27.806 | 392 | 257 | 4 | 128 | 519 | 170 | 535 | 3.13e-40 | 155 |
| MS.gene43660.t1 | AT4G24810 | 33.205 | 259 | 159 | 5 | 135 | 383 | 32 | 286 | 6.08e-40 | 150 |
| MS.gene43660.t1 | AT4G24810 | 33.205 | 259 | 159 | 5 | 135 | 383 | 32 | 286 | 6.08e-40 | 150 |
| MS.gene43660.t1 | AT4G24810 | 33.591 | 259 | 158 | 5 | 135 | 383 | 75 | 329 | 1.51e-39 | 150 |
| MS.gene43660.t1 | AT4G24810 | 32.707 | 266 | 158 | 6 | 135 | 383 | 32 | 293 | 2.20e-37 | 144 |
| MS.gene43660.t1 | AT3G24190 | 28.117 | 377 | 234 | 10 | 128 | 501 | 195 | 537 | 1.27e-36 | 145 |
| MS.gene43660.t1 | AT3G07700 | 26.044 | 407 | 275 | 5 | 127 | 519 | 192 | 586 | 2.04e-35 | 141 |
| MS.gene43660.t1 | AT5G50330 | 29.010 | 293 | 194 | 5 | 135 | 417 | 75 | 363 | 2.14e-35 | 139 |
| MS.gene43660.t1 | AT3G07700 | 27.157 | 394 | 258 | 7 | 127 | 519 | 192 | 557 | 2.58e-34 | 138 |
| MS.gene43660.t1 | AT3G07700 | 27.157 | 394 | 258 | 7 | 127 | 519 | 192 | 557 | 2.58e-34 | 138 |
| MS.gene43660.t1 | AT3G07700 | 27.157 | 394 | 258 | 7 | 127 | 519 | 192 | 557 | 2.58e-34 | 138 |
| MS.gene43660.t1 | AT1G71810 | 28.981 | 314 | 200 | 7 | 128 | 436 | 123 | 418 | 4.76e-34 | 137 |
| MS.gene43660.t1 | AT1G79600 | 25.320 | 391 | 265 | 3 | 128 | 518 | 150 | 513 | 1.25e-33 | 135 |
| MS.gene43660.t1 | AT4G31390 | 27.119 | 354 | 232 | 4 | 166 | 519 | 9 | 336 | 2.51e-33 | 132 |
| MS.gene43660.t1 | AT2G39190 | 27.427 | 412 | 251 | 8 | 126 | 519 | 200 | 581 | 2.87e-32 | 132 |
| MS.gene43660.t1 | AT4G31390 | 25.510 | 392 | 241 | 5 | 128 | 519 | 170 | 510 | 1.04e-31 | 130 |
| MS.gene43660.t1 | AT5G24970 | 27.864 | 323 | 210 | 4 | 135 | 438 | 147 | 465 | 1.26e-30 | 127 |
| MS.gene43660.t1 | AT5G24970 | 27.864 | 323 | 210 | 4 | 135 | 438 | 186 | 504 | 1.96e-30 | 126 |
| MS.gene43660.t1 | AT1G65950 | 32.685 | 257 | 159 | 7 | 130 | 381 | 104 | 351 | 1.40e-28 | 119 |
| MS.gene43660.t1 | AT1G65950 | 32.031 | 256 | 162 | 5 | 130 | 381 | 104 | 351 | 3.90e-28 | 118 |
| MS.gene43660.t1 | AT5G24970 | 26.347 | 334 | 219 | 5 | 128 | 438 | 133 | 462 | 4.35e-27 | 116 |
| MS.gene43660.t1 | AT5G50330 | 26.280 | 293 | 186 | 6 | 135 | 417 | 75 | 347 | 6.69e-27 | 114 |
| MS.gene43660.t1 | AT2G40090 | 31.716 | 268 | 168 | 8 | 107 | 367 | 71 | 330 | 6.69e-24 | 105 |
| MS.gene43660.t1 | AT1G61640 | 24.776 | 335 | 217 | 7 | 128 | 437 | 213 | 537 | 2.48e-20 | 95.1 |
| MS.gene43660.t1 | AT1G61640 | 24.776 | 335 | 217 | 7 | 128 | 437 | 213 | 537 | 2.97e-20 | 94.7 |
| MS.gene43660.t1 | AT1G11390 | 25.444 | 338 | 209 | 9 | 128 | 436 | 216 | 539 | 3.48e-20 | 94.7 |
| MS.gene43660.t1 | AT5G24810 | 25.753 | 299 | 202 | 9 | 131 | 417 | 104 | 394 | 1.96e-18 | 89.7 |
| MS.gene43660.t1 | AT1G61640 | 30.120 | 166 | 108 | 3 | 128 | 286 | 213 | 377 | 3.11e-15 | 78.6 |
| MS.gene43660.t1 | AT2G39190 | 29.878 | 164 | 108 | 4 | 126 | 287 | 200 | 358 | 2.08e-12 | 69.3 |
Find 130 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCGTCCATGGCGGTTTC+AGG | 0.150200 | 5.1:+52781027 | None:intergenic |
| CTGCAAATATTGAGGCTTTC+AGG | 0.155932 | 5.1:+52784936 | MS.gene43660:CDS |
| TCAATATTGCGTAAGGAATT+AGG | 0.239316 | 5.1:+52783902 | MS.gene43660:CDS |
| TTCCATAGCCGCCCATGTTT+TGG | 0.250868 | 5.1:-52785720 | None:intergenic |
| TGTAGCACCCATTTGAATTA+AGG | 0.251349 | 5.1:-52785792 | None:intergenic |
| TGTATAGTTGCTTCTTCTAT+TGG | 0.261988 | 5.1:-52786975 | None:intergenic |
| AAACAACCTCCTCAAATATA+AGG | 0.267524 | 5.1:-52782385 | None:intergenic |
| ATCTTACCACATCAAGAAAT+AGG | 0.275497 | 5.1:-52786536 | None:intergenic |
| AGATATAGCAGCTGGATTTC+TGG | 0.277222 | 5.1:-52786478 | None:intergenic |
| GAGCTCTATCAAAACAATTC+TGG | 0.288460 | 5.1:-52783853 | None:intergenic |
| ACTAATATGTCCTTTATTCC+TGG | 0.290833 | 5.1:-52784137 | None:intergenic |
| TTAACCATGCAAAGACTATA+TGG | 0.299937 | 5.1:+52785037 | MS.gene43660:CDS |
| GGCATCTTCCTTAATTCAAA+TGG | 0.302083 | 5.1:+52785784 | MS.gene43660:CDS |
| AGTGATGTCCGACTTATTTC+AGG | 0.303412 | 5.1:-52784212 | None:intergenic |
| GAGGAGGTTGTTTGAACGTC+TGG | 0.304018 | 5.1:+52782395 | MS.gene43660:CDS |
| ATCCTGAAGCATGTTCAAAT+TGG | 0.305592 | 5.1:-52786933 | None:intergenic |
| GTTCAGGTTAGTGAATCTTA+TGG | 0.306095 | 5.1:+52786833 | MS.gene43660:CDS |
| CAAGGTGTTCAAGCCTTCCT+TGG | 0.314462 | 5.1:+52781727 | MS.gene43660:CDS |
| GCAGTTATAAGGCTGGCTTC+TGG | 0.315287 | 5.1:-52785106 | None:intergenic |
| GTATATTACATTTAGGTTCA+TGG | 0.317756 | 5.1:+52784065 | MS.gene43660:intron |
| GTTCATGGTGCAAGGCTAAA+AGG | 0.331296 | 5.1:+52784080 | MS.gene43660:CDS |
| GGTCTTAAAACCAGGAATAA+AGG | 0.337479 | 5.1:+52784127 | MS.gene43660:CDS |
| TATTCGTACACACTTTCTAT+TGG | 0.340456 | 5.1:-52783929 | None:intergenic |
| AAGGTGTTCAAGCCTTCCTT+GGG | 0.347838 | 5.1:+52781728 | MS.gene43660:CDS |
| ACACATTGAGAGCAGTTATA+AGG | 0.355029 | 5.1:-52785117 | None:intergenic |
| TCCCAATTTGAACATGCTTC+AGG | 0.358785 | 5.1:+52786931 | MS.gene43660:CDS |
| AACAACCTCCTCAAATATAA+GGG | 0.359068 | 5.1:-52782384 | None:intergenic |
| TAAGGCCTTTGCCAGAGATT+TGG | 0.371621 | 5.1:+52785832 | MS.gene43660:CDS |
| TTATGTTGTTGCTCGGATAT+TGG | 0.374406 | 5.1:+52784178 | MS.gene43660:CDS |
| TCCTCGAGGTGTTCTTAGAT+TGG | 0.380487 | 5.1:+52781702 | MS.gene43660:CDS |
| CAGTTATAAGGCTGGCTTCT+GGG | 0.386851 | 5.1:-52785105 | None:intergenic |
| CAGTCAACAAACTCATCTGC+TGG | 0.399811 | 5.1:+52782327 | MS.gene43660:intron |
| GCGGCTATGGAAGTCTTCTT+AGG | 0.407523 | 5.1:+52785731 | MS.gene43660:CDS |
| ATTGATTGAATTACCTCAAA+AGG | 0.414259 | 5.1:-52783884 | None:intergenic |
| ATTCAATCTACAGGAATTGT+TGG | 0.415268 | 5.1:+52785686 | MS.gene43660:intron |
| AGGAGATATTTAGAAGCAAT+GGG | 0.419957 | 5.1:+52784956 | MS.gene43660:CDS |
| AAGCGGAAGCAAGGGGTGTT+GGG | 0.423572 | 5.1:-52783958 | None:intergenic |
| TCCCAAAACATGGGCGGCTA+TGG | 0.429305 | 5.1:+52785718 | MS.gene43660:CDS |
| TCTTACCACATCAAGAAATA+GGG | 0.431652 | 5.1:-52786535 | None:intergenic |
| TGAATTACCTCAAAAGGAAC+TGG | 0.433394 | 5.1:-52783878 | None:intergenic |
| CATCGTCCATGGCGGTTTCA+GGG | 0.436905 | 5.1:+52781028 | None:intergenic |
| ACAGGAGGATGTGGTTATAA+AGG | 0.438191 | 5.1:+52784106 | MS.gene43660:CDS |
| TTCTCCTCTCGTCGATTCCA+AGG | 0.445895 | 5.1:+52781189 | MS.gene43660:CDS |
| AGGAGGTTGTTTGAACGTCT+GGG | 0.446248 | 5.1:+52782396 | MS.gene43660:CDS |
| TTACTGACCTAGACTCAATT+AGG | 0.449505 | 5.1:+52785068 | MS.gene43660:CDS |
| CAGGAGATATTTAGAAGCAA+TGG | 0.452079 | 5.1:+52784955 | MS.gene43660:CDS |
| GAAGCGGAAGCAAGGGGTGT+TGG | 0.452864 | 5.1:-52783959 | None:intergenic |
| GACCAGTATCCACAGATGTC+TGG | 0.456037 | 5.1:-52781681 | None:intergenic |
| GGGGCAACCTACATCAAGTT+AGG | 0.464629 | 5.1:+52782417 | MS.gene43660:CDS |
| TCCTGAAGCATGTTCAAATT+GGG | 0.465530 | 5.1:-52786932 | None:intergenic |
| CTTCTACGTGATGGCCGTAT+CGG | 0.467669 | 5.1:+52785292 | MS.gene43660:CDS |
| GCATCTTCCTTAATTCAAAT+GGG | 0.467989 | 5.1:+52785785 | MS.gene43660:CDS |
| GTCCAGACATCTGTGGATAC+TGG | 0.468329 | 5.1:+52781679 | MS.gene43660:CDS |
| TGACCGGTACACACGGTTGT+TGG | 0.469311 | 5.1:+52786907 | MS.gene43660:CDS |
| ACAATATCCTCTACAAGCTT+AGG | 0.484332 | 5.1:-52781658 | None:intergenic |
| CAAGGAGGCTGCAAATATTG+AGG | 0.488753 | 5.1:+52784928 | MS.gene43660:CDS |
| TGCTATAGAAGCGGAAGCAA+GGG | 0.494091 | 5.1:-52783966 | None:intergenic |
| TGCTTCCGCTTCTATAGCAC+AGG | 0.501296 | 5.1:+52783970 | MS.gene43660:CDS |
| GAACACTTTCTCCAAATCTC+TGG | 0.501529 | 5.1:-52785843 | None:intergenic |
| TTCATGCAGATGTGCATGCT+GGG | 0.511717 | 5.1:+52785260 | MS.gene43660:CDS |
| GCTTCTTCTATTGGAAGCAA+TGG | 0.512791 | 5.1:-52786966 | None:intergenic |
| TAGAAGCAATGGGGCTCACT+AGG | 0.515739 | 5.1:+52784966 | MS.gene43660:CDS |
| TTTCATGCAGATGTGCATGC+TGG | 0.515941 | 5.1:+52785259 | MS.gene43660:CDS |
| TGAAATAAGTCGGACATCAC+TGG | 0.520113 | 5.1:+52784214 | MS.gene43660:CDS |
| CTAATGACCTAATTGAGTCT+AGG | 0.524958 | 5.1:-52785075 | None:intergenic |
| GTGCTATAGAAGCGGAAGCA+AGG | 0.525817 | 5.1:-52783967 | None:intergenic |
| TTGACTTAGAATGAAGATTG+AGG | 0.526856 | 5.1:-52781122 | None:intergenic |
| ACATTTAGGTTCATGGTGCA+AGG | 0.527571 | 5.1:+52784072 | MS.gene43660:intron |
| CATCGATGATTATGACTCAA+TGG | 0.527806 | 5.1:+52785763 | MS.gene43660:CDS |
| ATTGAGTCTAGGTCAGTAAG+AGG | 0.528195 | 5.1:-52785064 | None:intergenic |
| AAAAGGCTCACAGGAGGATG+TGG | 0.532003 | 5.1:+52784097 | MS.gene43660:CDS |
| ACATTAGCAGATATAGCAGC+TGG | 0.532569 | 5.1:-52786486 | None:intergenic |
| GTCGTATATCTCCCAAAACA+TGG | 0.534399 | 5.1:+52785708 | MS.gene43660:CDS |
| ATGTGCATGCTGGGAATCTG+TGG | 0.537590 | 5.1:+52785269 | MS.gene43660:CDS |
| GAAAGTGTTCTCATCAATGA+AGG | 0.538627 | 5.1:+52785856 | MS.gene43660:CDS |
| GGTCGGTCAAGAGTGGTTAA+CGG | 0.543307 | 5.1:+52781750 | MS.gene43660:CDS |
| AACTCTTGTACATACTCAGC+TGG | 0.546332 | 5.1:-52783830 | None:intergenic |
| TACCTGTCCTAACTTGATGT+AGG | 0.546609 | 5.1:-52782424 | None:intergenic |
| TGAACATGCTTCAGGATCAG+AGG | 0.547988 | 5.1:+52786939 | MS.gene43660:CDS |
| AAACAACGATGTTAATGCTA+AGG | 0.548227 | 5.1:+52785814 | MS.gene43660:CDS |
| GTTCAAGCCTTCCTTGGGGT+CGG | 0.552457 | 5.1:+52781733 | MS.gene43660:CDS |
| ATAGTTGTAGCAACTAGAAG+TGG | 0.552586 | 5.1:+52786450 | MS.gene43660:CDS |
| AATTCAATCAATATTGCGTA+AGG | 0.555432 | 5.1:+52783895 | MS.gene43660:CDS |
| GGAGGTTGTTTGAACGTCTG+GGG | 0.556010 | 5.1:+52782397 | MS.gene43660:CDS |
| ATTGAGAGCAGTTATAAGGC+TGG | 0.557275 | 5.1:-52785113 | None:intergenic |
| TGCAAGGCTAAAAGGCTCAC+AGG | 0.564220 | 5.1:+52784088 | MS.gene43660:CDS |
| CTCTTGACCGACCCCAAGGA+AGG | 0.568780 | 5.1:-52781740 | None:intergenic |
| TACTCAGCTGGAAATAGTGT+TGG | 0.570113 | 5.1:-52783818 | None:intergenic |
| CGTATCGGATTTCTTGACTT+CGG | 0.570824 | 5.1:+52785307 | MS.gene43660:CDS |
| TGATTGTGATGATGAATCAA+TGG | 0.583878 | 5.1:-52781072 | None:intergenic |
| ATATACCTGTGCTATAGAAG+CGG | 0.584654 | 5.1:-52783975 | None:intergenic |
| TCCTTGGGGTCGGTCAAGAG+TGG | 0.585588 | 5.1:+52781743 | MS.gene43660:CDS |
| AACCTACATCAAGTTAGGAC+AGG | 0.588211 | 5.1:+52782422 | MS.gene43660:CDS |
| TTTCTCCAAATCTCTGGCAA+AGG | 0.590427 | 5.1:-52785837 | None:intergenic |
| GAGCCAACAACCGTGTGTAC+CGG | 0.591221 | 5.1:-52786910 | None:intergenic |
| AACACCATATAGTCTTTGCA+TGG | 0.591946 | 5.1:-52785041 | None:intergenic |
| ATGAAGATTGAGGTTCGTGA+AGG | 0.592071 | 5.1:-52781112 | None:intergenic |
| GTGGTTAACGGATGTATCGA+AGG | 0.595698 | 5.1:+52781762 | MS.gene43660:CDS |
| GAGGTTGTTTGAACGTCTGG+GGG | 0.598966 | 5.1:+52782398 | MS.gene43660:CDS |
| ACAACCTCCTCAAATATAAG+GGG | 0.605774 | 5.1:-52782383 | None:intergenic |
| TCTTGAATCCTGAAATAAGT+CGG | 0.606783 | 5.1:+52784204 | MS.gene43660:CDS |
| ACCACTCTTGACCGACCCCA+AGG | 0.616609 | 5.1:-52781744 | None:intergenic |
| GGTGTTCTTAGATTGGCTCA+AGG | 0.617101 | 5.1:+52781709 | MS.gene43660:CDS |
| AAAGCTACCTAAGCTTGTAG+AGG | 0.617471 | 5.1:+52781651 | MS.gene43660:CDS |
| AGACCAAGCTGCAGTTCTGT+CGG | 0.617876 | 5.1:-52782354 | None:intergenic |
| TTACCGACAGAACTGCAGCT+TGG | 0.620695 | 5.1:+52782351 | MS.gene43660:CDS |
| TCTCAACCCTGAAACCGCCA+TGG | 0.622476 | 5.1:-52781034 | None:intergenic |
| AGTCAACAAACTCATCTGCT+GGG | 0.623127 | 5.1:+52782328 | MS.gene43660:intron |
| CATTGAGTCATAATCATCGA+TGG | 0.624222 | 5.1:-52785762 | None:intergenic |
| GTTATAAAGGTCTTAAAACC+AGG | 0.626989 | 5.1:+52784119 | MS.gene43660:CDS |
| CGAAGTCAAGAAATCCGATA+CGG | 0.628455 | 5.1:-52785306 | None:intergenic |
| GAATGCCCTATTTCTTGATG+TGG | 0.639985 | 5.1:+52786530 | MS.gene43660:CDS |
| GCTATAGAAGCGGAAGCAAG+GGG | 0.641052 | 5.1:-52783965 | None:intergenic |
| TTATAACTGCTCTCAATGTG+TGG | 0.642384 | 5.1:+52785119 | MS.gene43660:CDS |
| AATCTGTGGCTTCTACGTGA+TGG | 0.642685 | 5.1:+52785283 | MS.gene43660:CDS |
| AGAAGAAGCGCAAATTCTCG+AGG | 0.647530 | 5.1:-52786866 | None:intergenic |
| GGATATTGTCCAGACATCTG+TGG | 0.651728 | 5.1:+52781672 | MS.gene43660:CDS |
| CTAATGTAGTTGTTGATGAG+AGG | 0.654433 | 5.1:+52786502 | MS.gene43660:CDS |
| AGCTGGAAATAGTGTTGGTG+CGG | 0.664408 | 5.1:-52783813 | None:intergenic |
| TGTATCAAAACTGCAGTACG+CGG | 0.673275 | 5.1:+52785008 | MS.gene43660:CDS |
| TCGTATATCTCCCAAAACAT+GGG | 0.675246 | 5.1:+52785709 | MS.gene43660:CDS |
| GAAACCTTGGAATCGACGAG+AGG | 0.676580 | 5.1:-52781193 | None:intergenic |
| CAACCTCCTCAAATATAAGG+GGG | 0.689753 | 5.1:-52782382 | None:intergenic |
| TCTGTGGATACTGGTCCTCG+AGG | 0.693516 | 5.1:+52781688 | MS.gene43660:CDS |
| AGGTGTTCAAGCCTTCCTTG+GGG | 0.700325 | 5.1:+52781729 | MS.gene43660:CDS |
| TATATCTCCCAAAACATGGG+CGG | 0.700368 | 5.1:+52785712 | MS.gene43660:CDS |
| TCAGGGTTGAGAAGTAGCTG+CGG | 0.703044 | 5.1:+52781045 | MS.gene43660:CDS |
| AAGGCTAAAAGGCTCACAGG+AGG | 0.703298 | 5.1:+52784091 | MS.gene43660:CDS |
| GGAGATATTTAGAAGCAATG+GGG | 0.716924 | 5.1:+52784957 | MS.gene43660:CDS |
| GCCAATCTAAGAACACCTCG+AGG | 0.733185 | 5.1:-52781703 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATTGTAAATAGATTT+AGG | + | chr5.1:52782695-52782714 | MS.gene43660:intron | 10.0% |
| !! | ATTTATTGTAAATAGATTTA+GGG | + | chr5.1:52782696-52782715 | MS.gene43660:intron | 10.0% |
| !!! | AATATTACATTTTATATCTA+AGG | - | chr5.1:52783481-52783500 | None:intergenic | 10.0% |
| !! | AAATATTTATCTACAATACA+TGG | - | chr5.1:52786313-52786332 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr5.1:52783202-52783183 | None:intergenic | 15.0% |
| !! | AAGAAAATGAATTTAGTAAA+AGG | - | chr5.1:52784384-52784403 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr5.1:52783184-52783203 | MS.gene43660:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr5.1:52783203-52783184 | None:intergenic | 15.0% |
| !! | AATTGTTGTATATTACATTT+AGG | + | chr5.1:52784058-52784077 | MS.gene43660:intron | 15.0% |
| !! | AGAAAATGAATTTAGTAAAA+GGG | - | chr5.1:52784383-52784402 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr5.1:52782962-52782981 | None:intergenic | 15.0% |
| !! | TGATAAATTAGAAAGAAATA+TGG | + | chr5.1:52783448-52783467 | MS.gene43660:intron | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr5.1:52783093-52783112 | MS.gene43660:intron | 15.0% |
| !! | TTGTGATTGTTAAAATTATT+GGG | + | chr5.1:52782492-52782511 | MS.gene43660:intron | 15.0% |
| !! | TTTGTGATTGTTAAAATTAT+TGG | + | chr5.1:52782491-52782510 | MS.gene43660:intron | 15.0% |
| !!! | AATATTTTACAGTTTTTAGT+TGG | + | chr5.1:52783632-52783651 | MS.gene43660:intron | 15.0% |
| !!! | TCAAAATTGTACATTTTATT+TGG | + | chr5.1:52785424-52785443 | MS.gene43660:intron | 15.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr5.1:52782832-52782851 | None:intergenic | 20.0% |
| !! | AATTTACACCTTAAATCTAT+GGG | - | chr5.1:52783258-52783277 | None:intergenic | 20.0% |
| !! | AGATACATTATCATGTTAAA+AGG | - | chr5.1:52785190-52785209 | None:intergenic | 20.0% |
| !! | ATAATTAACCCATAGATTTA+AGG | + | chr5.1:52783247-52783266 | MS.gene43660:intron | 20.0% |
| !! | ATTTGTTTCCTAATGAAATT+AGG | - | chr5.1:52783429-52783448 | None:intergenic | 20.0% |
| !! | GATACATTATCATGTTAAAA+GGG | - | chr5.1:52785189-52785208 | None:intergenic | 20.0% |
| !! | TAAAACAAAATTCAATCTAC+AGG | + | chr5.1:52785677-52785696 | MS.gene43660:intron | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr5.1:52782833-52782852 | None:intergenic | 20.0% |
| !! | TAATTTACACCTTAAATCTA+TGG | - | chr5.1:52783259-52783278 | None:intergenic | 20.0% |
| !! | TAGAAGATCAGTTATAAATT+AGG | - | chr5.1:52783733-52783752 | None:intergenic | 20.0% |
| !! | TATAAAATATTGTCGTATAG+CGG | + | chr5.1:52782026-52782045 | MS.gene43660:intron | 20.0% |
| !! | TTACAGTAATATTACTTCAT+TGG | + | chr5.1:52783551-52783570 | MS.gene43660:intron | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | chr5.1:52782927-52782946 | None:intergenic | 20.0% |
| !!! | ACATTTTATTCAAATTACTG+TGG | + | chr5.1:52784025-52784044 | MS.gene43660:intron | 20.0% |
| !!! | ATTTTTGAAAAATGAGTATC+TGG | - | chr5.1:52781412-52781431 | None:intergenic | 20.0% |
| !!! | CGACAATATTTTATACTAAA+TGG | - | chr5.1:52782021-52782040 | None:intergenic | 20.0% |
| !!! | TACATTTTATATCTAAGGAT+AGG | - | chr5.1:52783476-52783495 | None:intergenic | 20.0% |
| !!! | TTGGTGTTTTTTTAAATGAT+AGG | + | chr5.1:52782273-52782292 | MS.gene43660:intron | 20.0% |
| ! | AAAAATTACCATTGGTACAA+GGG | - | chr5.1:52783767-52783786 | None:intergenic | 25.0% |
| ! | AACACAAACTACTATTCAAA+AGG | - | chr5.1:52782224-52782243 | None:intergenic | 25.0% |
| ! | AACATAGTTAAAAATTTCCC+TGG | - | chr5.1:52784336-52784355 | None:intergenic | 25.0% |
| ! | AAGAGAGATTTAGAAGTTAA+TGG | - | chr5.1:52784560-52784579 | None:intergenic | 25.0% |
| ! | AATTCAATCAATATTGCGTA+AGG | + | chr5.1:52783895-52783914 | MS.gene43660:CDS | 25.0% |
| ! | ACAATCTAATAAAAAGGTAG+AGG | - | chr5.1:52784614-52784633 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | chr5.1:52782799-52782818 | None:intergenic | 25.0% |
| ! | ATGACCTCAAATTATGATTA+TGG | + | chr5.1:52782545-52782564 | MS.gene43660:intron | 25.0% |
| ! | ATGCTATATGTTTACTTTCT+AGG | + | chr5.1:52781794-52781813 | MS.gene43660:intron | 25.0% |
| ! | ATGTTATAAAAGAGAAAGAC+AGG | - | chr5.1:52784009-52784028 | None:intergenic | 25.0% |
| ! | ATTATCATGTTAAAAGGGAA+AGG | - | chr5.1:52785184-52785203 | None:intergenic | 25.0% |
| ! | ATTGATTGAATTACCTCAAA+AGG | - | chr5.1:52783887-52783906 | None:intergenic | 25.0% |
| ! | ATTTGTTTCCTCAGTAAATT+AGG | - | chr5.1:52782629-52782648 | None:intergenic | 25.0% |
| ! | CAAAACAATATGCTGATAAA+TGG | - | chr5.1:52785474-52785493 | None:intergenic | 25.0% |
| ! | CAATCTAATAAAAAGGTAGA+GGG | - | chr5.1:52784613-52784632 | None:intergenic | 25.0% |
| ! | CTATCATTGAAATGAAACAA+AGG | + | chr5.1:52784723-52784742 | MS.gene43660:intron | 25.0% |
| ! | GAAAAACCAAAAATTACCAT+TGG | - | chr5.1:52783775-52783794 | None:intergenic | 25.0% |
| ! | GAAACCATAATCATAATTTG+AGG | - | chr5.1:52782552-52782571 | None:intergenic | 25.0% |
| ! | GGTTTCTTACATAAAAAACT+AGG | + | chr5.1:52782566-52782585 | MS.gene43660:intron | 25.0% |
| ! | GTAAACTTGTGTTATAAGAA+AGG | - | chr5.1:52784846-52784865 | None:intergenic | 25.0% |
| ! | GTAATATTGAGTCATGTATT+AGG | + | chr5.1:52784518-52784537 | MS.gene43660:intron | 25.0% |
| ! | TAAATATTTCCATCATTGAG+TGG | + | chr5.1:52786324-52786343 | MS.gene43660:intron | 25.0% |
| ! | TTATACTAAATGGCGTATTT+CGG | - | chr5.1:52782011-52782030 | None:intergenic | 25.0% |
| ! | TTCATTGTCAAAACAACAAA+AGG | - | chr5.1:52782176-52782195 | None:intergenic | 25.0% |
| ! | TTGATATAAAATATTGCTGC+AGG | + | chr5.1:52785209-52785228 | MS.gene43660:intron | 25.0% |
| ! | TTTAAATTGTTGTGCTGAAA+TGG | + | chr5.1:52781582-52781601 | MS.gene43660:intron | 25.0% |
| ! | TTTACTGAGGAAACAAATTA+TGG | + | chr5.1:52782631-52782650 | MS.gene43660:intron | 25.0% |
| !! | CAAAATAAATGTTTTCACTG+TGG | + | chr5.1:52781554-52781573 | MS.gene43660:intron | 25.0% |
| !! | GTATATTACATTTAGGTTCA+TGG | + | chr5.1:52784065-52784084 | MS.gene43660:intron | 25.0% |
| !! | TATTTTCATATTGTAGTCGT+AGG | - | chr5.1:52784286-52784305 | None:intergenic | 25.0% |
| !! | TCTTATTTGTCAAAACAGTA+AGG | - | chr5.1:52786645-52786664 | None:intergenic | 25.0% |
| !! | TTAAGTGTCTTGCTAATTTT+TGG | + | chr5.1:52785948-52785967 | MS.gene43660:intron | 25.0% |
| !!! | AAATTATTGGGTTTTAGATG+AGG | + | chr5.1:52782504-52782523 | MS.gene43660:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr5.1:52783122-52783141 | MS.gene43660:intron | 25.0% |
| !!! | AATGTACAATTTTGAAACCT+TGG | - | chr5.1:52785419-52785438 | None:intergenic | 25.0% |
| !!! | AATTATTGGGTTTTAGATGA+GGG | + | chr5.1:52782505-52782524 | MS.gene43660:intron | 25.0% |
| !!! | ACATTTATTTTGAGCTCAAT+TGG | - | chr5.1:52781546-52781565 | None:intergenic | 25.0% |
| !!! | AGGATTACTTTAAGTTGTAT+AGG | + | chr5.1:52782117-52782136 | MS.gene43660:intron | 25.0% |
| !!! | ATTTTGTTTATGTTGTTGCT+CGG | + | chr5.1:52784171-52784190 | MS.gene43660:CDS | 25.0% |
| !!! | CTCTCAACGTATTTTTTTTT+TGG | + | chr5.1:52782254-52782273 | MS.gene43660:intron | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr5.1:52783121-52783140 | MS.gene43660:intron | 25.0% |
| AAACAACCTCCTCAAATATA+AGG | - | chr5.1:52782388-52782407 | None:intergenic | 30.0% | |
| AAACAACGATGTTAATGCTA+AGG | + | chr5.1:52785814-52785833 | MS.gene43660:CDS | 30.0% | |
| AACAACCTCCTCAAATATAA+GGG | - | chr5.1:52782387-52782406 | None:intergenic | 30.0% | |
| AACACAAGTTTACCTTTAGT+AGG | + | chr5.1:52784853-52784872 | MS.gene43660:intron | 30.0% | |
| AACTTCTAAATCTCTCTTGA+CGG | + | chr5.1:52784562-52784581 | MS.gene43660:intron | 30.0% | |
| AAGCTCTTTGTTAGCTATTA+TGG | + | chr5.1:52784758-52784777 | MS.gene43660:intron | 30.0% | |
| AAGGATATGATCAAATCAAG+TGG | - | chr5.1:52783694-52783713 | None:intergenic | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | + | chr5.1:52783199-52783218 | MS.gene43660:intron | 30.0% | |
| AATCACTTTGACACTATGAT+GGG | + | chr5.1:52783357-52783376 | MS.gene43660:intron | 30.0% | |
| ACTAATATGTCCTTTATTCC+TGG | - | chr5.1:52784140-52784159 | None:intergenic | 30.0% | |
| ACTACTATTCAAAAGGAATC+AGG | - | chr5.1:52782217-52782236 | None:intergenic | 30.0% | |
| ACTATATTCTCTCATTGAGA+AGG | - | chr5.1:52781895-52781914 | None:intergenic | 30.0% | |
| AGCTCTTTGTTAGCTATTAT+GGG | + | chr5.1:52784759-52784778 | MS.gene43660:intron | 30.0% | |
| AGGAGATATTTAGAAGCAAT+GGG | + | chr5.1:52784956-52784975 | MS.gene43660:CDS | 30.0% | |
| AGTAAAAGGGACAATAACAA+AGG | - | chr5.1:52784370-52784389 | None:intergenic | 30.0% | |
| ATAAAATATTGCTGCAGGTT+TGG | + | chr5.1:52785214-52785233 | MS.gene43660:intron | 30.0% | |
| ATCACAAAATACAAGCAAAG+AGG | - | chr5.1:52782479-52782498 | None:intergenic | 30.0% | |
| ATCTTACCACATCAAGAAAT+AGG | - | chr5.1:52786539-52786558 | None:intergenic | 30.0% | |
| ATTCAATCTACAGGAATTGT+TGG | + | chr5.1:52785686-52785705 | MS.gene43660:intron | 30.0% | |
| CAAAAATTACCATTGGTACA+AGG | - | chr5.1:52783768-52783787 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr5.1:52783059-52783078 | None:intergenic | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | - | chr5.1:52782800-52782819 | None:intergenic | 30.0% | |
| GCATCTTCCTTAATTCAAAT+GGG | + | chr5.1:52785785-52785804 | MS.gene43660:CDS | 30.0% | |
| GTCATCTATATATATTCCAC+AGG | + | chr5.1:52786811-52786830 | MS.gene43660:intron | 30.0% | |
| GTTATAAAGGTCTTAAAACC+AGG | + | chr5.1:52784119-52784138 | MS.gene43660:CDS | 30.0% | |
| GTTTAGTATTAGTTCGAATG+AGG | - | chr5.1:52782599-52782618 | None:intergenic | 30.0% | |
| TAAAAGCAACCTTAGCATTT+CGG | - | chr5.1:52786579-52786598 | None:intergenic | 30.0% | |
| TAATCACTTTGACACTATGA+TGG | + | chr5.1:52783356-52783375 | MS.gene43660:intron | 30.0% | |
| TACATAAAAAACTAGGCACT+AGG | + | chr5.1:52782573-52782592 | MS.gene43660:intron | 30.0% | |
| TATATATATTCCACAGGTTC+AGG | + | chr5.1:52786817-52786836 | MS.gene43660:intron | 30.0% | |
| TATCACTTTGACACTATGAT+GGG | + | chr5.1:52783277-52783296 | MS.gene43660:intron | 30.0% | |
| TATTAGATTGTCCTCCATTT+GGG | + | chr5.1:52784623-52784642 | MS.gene43660:intron | 30.0% | |
| TATTCGTACACACTTTCTAT+TGG | - | chr5.1:52783932-52783951 | None:intergenic | 30.0% | |
| TCAATATTGCGTAAGGAATT+AGG | + | chr5.1:52783902-52783921 | MS.gene43660:CDS | 30.0% | |
| TCTTACCACATCAAGAAATA+GGG | - | chr5.1:52786538-52786557 | None:intergenic | 30.0% | |
| TCTTGAATCCTGAAATAAGT+CGG | + | chr5.1:52784204-52784223 | MS.gene43660:CDS | 30.0% | |
| TGGAGGACAATCTAATAAAA+AGG | - | chr5.1:52784620-52784639 | None:intergenic | 30.0% | |
| TGTATAGTTGCTTCTTCTAT+TGG | - | chr5.1:52786978-52786997 | None:intergenic | 30.0% | |
| TTAACCATGCAAAGACTATA+TGG | + | chr5.1:52785037-52785056 | MS.gene43660:CDS | 30.0% | |
| TTAATGGTCTATCTATCTCT+AGG | - | chr5.1:52784544-52784563 | None:intergenic | 30.0% | |
| TTATCACTTTGACACTATGA+TGG | + | chr5.1:52783276-52783295 | MS.gene43660:intron | 30.0% | |
| TTATTAGATTGTCCTCCATT+TGG | + | chr5.1:52784622-52784641 | MS.gene43660:intron | 30.0% | |
| TTCCTAATGAAATTAGGACT+AGG | - | chr5.1:52783423-52783442 | None:intergenic | 30.0% | |
| TTCCTCAGTAAATTAGGATT+AGG | - | chr5.1:52782623-52782642 | None:intergenic | 30.0% | |
| TTGACTTAGAATGAAGATTG+AGG | - | chr5.1:52781125-52781144 | None:intergenic | 30.0% | |
| TTGTCAAAACAACAAAAGGT+TGG | - | chr5.1:52782172-52782191 | None:intergenic | 30.0% | |
| ! | CTTGTACCAATGGTAATTTT+TGG | + | chr5.1:52783766-52783785 | MS.gene43660:intron | 30.0% |
| ! | GAAGCATTTATGTAAGTGTT+TGG | - | chr5.1:52784824-52784843 | None:intergenic | 30.0% |
| ! | GAATGCATAGAGAAAGTATA+AGG | - | chr5.1:52781230-52781249 | None:intergenic | 30.0% |
| ! | TAAATTGATCCCTACTGATT+AGG | + | chr5.1:52786367-52786386 | MS.gene43660:intron | 30.0% |
| ! | TGATTGTGATGATGAATCAA+TGG | - | chr5.1:52781075-52781094 | None:intergenic | 30.0% |
| !! | ATCAGCATATTGTTTTGCTA+TGG | + | chr5.1:52785477-52785496 | MS.gene43660:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr5.1:52783215-52783234 | MS.gene43660:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr5.1:52783234-52783215 | None:intergenic | 30.0% |
| !! | TGAAGAAGTTGACTTTTACA+AGG | + | chr5.1:52784910-52784929 | MS.gene43660:CDS | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr5.1:52783214-52783233 | MS.gene43660:intron | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr5.1:52783233-52783214 | None:intergenic | 30.0% |
| !!! | AGAAACAAACTTTTTGAGTC+AGG | - | chr5.1:52786265-52786284 | None:intergenic | 30.0% |
| !!! | GGTAATTTTTGGTTTTTCTC+TGG | + | chr5.1:52783777-52783796 | MS.gene43660:intron | 30.0% |
| !!! | TGTAGGGTTTTGGATAAAAA+AGG | + | chr5.1:52783302-52783321 | MS.gene43660:intron | 30.0% |
| AACACCATATAGTCTTTGCA+TGG | - | chr5.1:52785044-52785063 | None:intergenic | 35.0% | |
| AACCTTGGAAAGTTAACAGA+TGG | - | chr5.1:52785404-52785423 | None:intergenic | 35.0% | |
| AAGCGAGTTTATGTGTGTTA+TGG | - | chr5.1:52785890-52785909 | None:intergenic | 35.0% | |
| AAGGTTGCAAGATGATTTCA+TGG | - | chr5.1:52785508-52785527 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr5.1:52782755-52782774 | None:intergenic | 35.0% | |
| ACAACCTCCTCAAATATAAG+GGG | - | chr5.1:52782386-52782405 | None:intergenic | 35.0% | |
| ACAATATCCTCTACAAGCTT+AGG | - | chr5.1:52781661-52781680 | None:intergenic | 35.0% | |
| ACACATTGAGAGCAGTTATA+AGG | - | chr5.1:52785120-52785139 | None:intergenic | 35.0% | |
| AGCAATAACTCCTAATCAGT+AGG | - | chr5.1:52786380-52786399 | None:intergenic | 35.0% | |
| AGGAACGAACTATAGTATCA+AGG | - | chr5.1:52783713-52783732 | None:intergenic | 35.0% | |
| ATAAAAAAGGAGGGAAGAGA+TGG | + | chr5.1:52783315-52783334 | MS.gene43660:intron | 35.0% | |
| ATAGTTGCTCTCAAACTACT+CGG | + | chr5.1:52786061-52786080 | MS.gene43660:intron | 35.0% | |
| ATAGTTGTAGCAACTAGAAG+TGG | + | chr5.1:52786450-52786469 | MS.gene43660:CDS | 35.0% | |
| ATATACCTGTGCTATAGAAG+CGG | - | chr5.1:52783978-52783997 | None:intergenic | 35.0% | |
| ATCACTTTGACACTATGATG+GGG | + | chr5.1:52783278-52783297 | MS.gene43660:intron | 35.0% | |
| ATCCTGAAGCATGTTCAAAT+TGG | - | chr5.1:52786936-52786955 | None:intergenic | 35.0% | |
| ATTAGATTGTCCTCCATTTG+GGG | + | chr5.1:52784624-52784643 | MS.gene43660:intron | 35.0% | |
| CAAAATACAAGCAAAGAGGA+TGG | - | chr5.1:52782475-52782494 | None:intergenic | 35.0% | |
| CAAAGCAGAACAGTGATTAA+AGG | - | chr5.1:52785527-52785546 | None:intergenic | 35.0% | |
| CAAGTTTACCTTTAGTAGGT+TGG | + | chr5.1:52784857-52784876 | MS.gene43660:intron | 35.0% | |
| CAGGAGATATTTAGAAGCAA+TGG | + | chr5.1:52784955-52784974 | MS.gene43660:CDS | 35.0% | |
| CATCGATGATTATGACTCAA+TGG | + | chr5.1:52785763-52785782 | MS.gene43660:CDS | 35.0% | |
| CATTGAGTCATAATCATCGA+TGG | - | chr5.1:52785765-52785784 | None:intergenic | 35.0% | |
| CTAATGACCTAATTGAGTCT+AGG | - | chr5.1:52785078-52785097 | None:intergenic | 35.0% | |
| CTAGGTTAGATAAGTAGCAA+GGG | + | chr5.1:52786211-52786230 | MS.gene43660:intron | 35.0% | |
| CTCCTAATCCTAATTTACTG+AGG | + | chr5.1:52782618-52782637 | MS.gene43660:intron | 35.0% | |
| CTCCTAGTCCTAATTTCATT+AGG | + | chr5.1:52783418-52783437 | MS.gene43660:intron | 35.0% | |
| CTCTTTGTTAGCTATTATGG+GGG | + | chr5.1:52784761-52784780 | MS.gene43660:intron | 35.0% | |
| GAAATTCAACCACTCAATGA+TGG | - | chr5.1:52786336-52786355 | None:intergenic | 35.0% | |
| GACACTTACTGATACATACA+TGG | + | chr5.1:52784252-52784271 | MS.gene43660:intron | 35.0% | |
| GAGCTCTATCAAAACAATTC+TGG | - | chr5.1:52783856-52783875 | None:intergenic | 35.0% | |
| GCAATAACTCCTAATCAGTA+GGG | - | chr5.1:52786379-52786398 | None:intergenic | 35.0% | |
| GCTCTTTGTTAGCTATTATG+GGG | + | chr5.1:52784760-52784779 | MS.gene43660:intron | 35.0% | |
| GGAGATATTTAGAAGCAATG+GGG | + | chr5.1:52784957-52784976 | MS.gene43660:CDS | 35.0% | |
| GGCATCTTCCTTAATTCAAA+TGG | + | chr5.1:52785784-52785803 | MS.gene43660:CDS | 35.0% | |
| GGTCTTAAAACCAGGAATAA+AGG | + | chr5.1:52784127-52784146 | MS.gene43660:CDS | 35.0% | |
| GTAGGTATGCATCTAATCTA+CGG | - | chr5.1:52781873-52781892 | None:intergenic | 35.0% | |
| TAGCTAACAAAGAGCTTATG+TGG | - | chr5.1:52784755-52784774 | None:intergenic | 35.0% | |
| TAGGTTAGATAAGTAGCAAG+GGG | + | chr5.1:52786212-52786231 | MS.gene43660:intron | 35.0% | |
| TATACAGCATATGTGACTTG+TGG | + | chr5.1:52786727-52786746 | MS.gene43660:intron | 35.0% | |
| TATTCTCTCATTGAGAAGGT+AGG | - | chr5.1:52781891-52781910 | None:intergenic | 35.0% | |
| TCCTGAAGCATGTTCAAATT+GGG | - | chr5.1:52786935-52786954 | None:intergenic | 35.0% | |
| TCGTATATCTCCCAAAACAT+GGG | + | chr5.1:52785709-52785728 | MS.gene43660:CDS | 35.0% | |
| TCTTTGTTAGCTATTATGGG+GGG | + | chr5.1:52784762-52784781 | MS.gene43660:intron | 35.0% | |
| TGAATTACCTCAAAAGGAAC+TGG | - | chr5.1:52783881-52783900 | None:intergenic | 35.0% | |
| TGACAATACCAACCTACTAA+AGG | - | chr5.1:52784868-52784887 | None:intergenic | 35.0% | |
| TGTAGCACCCATTTGAATTA+AGG | - | chr5.1:52785795-52785814 | None:intergenic | 35.0% | |
| TTACTGACCTAGACTCAATT+AGG | + | chr5.1:52785068-52785087 | MS.gene43660:CDS | 35.0% | |
| TTAGTTGCTCTCAAACTACT+CGG | + | chr5.1:52785993-52786012 | MS.gene43660:intron | 35.0% | |
| TTATAACTGCTCTCAATGTG+TGG | + | chr5.1:52785119-52785138 | MS.gene43660:CDS | 35.0% | |
| TTATGTTGTTGCTCGGATAT+TGG | + | chr5.1:52784178-52784197 | MS.gene43660:CDS | 35.0% | |
| ! | CTAATGTAGTTGTTGATGAG+AGG | + | chr5.1:52786502-52786521 | MS.gene43660:CDS | 35.0% |
| ! | CTTTTTGCATGGTTTACAGT+TGG | + | chr5.1:52785343-52785362 | MS.gene43660:intron | 35.0% |
| ! | GAGAAAGTATAAGGAGTTGA+AGG | - | chr5.1:52781221-52781240 | None:intergenic | 35.0% |
| ! | GTTCAGGTTAGTGAATCTTA+TGG | + | chr5.1:52786833-52786852 | MS.gene43660:CDS | 35.0% |
| !! | AGAAGTTGACTTTTACAAGG+AGG | + | chr5.1:52784913-52784932 | MS.gene43660:CDS | 35.0% |
| !! | CTGCAGTTTTGATACACTTT+TGG | - | chr5.1:52785004-52785023 | None:intergenic | 35.0% |
| !! | GAAAGTGTTCTCATCAATGA+AGG | + | chr5.1:52785856-52785875 | MS.gene43660:CDS | 35.0% |
| !! | TCTCTTGACGGTTTTATCAA+TGG | + | chr5.1:52784574-52784593 | MS.gene43660:intron | 35.0% |
| !!! | AGGGTTTTGGATAAAAAAGG+AGG | + | chr5.1:52783305-52783324 | MS.gene43660:intron | 35.0% |
| !!! | GGGTTTTGGATAAAAAAGGA+GGG | + | chr5.1:52783306-52783325 | MS.gene43660:intron | 35.0% |
| AAAGCTACCTAAGCTTGTAG+AGG | + | chr5.1:52781651-52781670 | MS.gene43660:CDS | 40.0% | |
| AACCTACATCAAGTTAGGAC+AGG | + | chr5.1:52782422-52782441 | MS.gene43660:CDS | 40.0% | |
| AACTCTTGTACATACTCAGC+TGG | - | chr5.1:52783833-52783852 | None:intergenic | 40.0% | |
| AATACAAGCAAAGAGGATGG+AGG | - | chr5.1:52782472-52782491 | None:intergenic | 40.0% | |
| ACAGGAGGATGTGGTTATAA+AGG | + | chr5.1:52784106-52784125 | MS.gene43660:CDS | 40.0% | |
| ACATTAGCAGATATAGCAGC+TGG | - | chr5.1:52786489-52786508 | None:intergenic | 40.0% | |
| AGATATAGCAGCTGGATTTC+TGG | - | chr5.1:52786481-52786500 | None:intergenic | 40.0% | |
| AGTATACCAACCTATGGTCA+TGG | - | chr5.1:52781934-52781953 | None:intergenic | 40.0% | |
| AGTCAACAAACTCATCTGCT+GGG | + | chr5.1:52782328-52782347 | MS.gene43660:intron | 40.0% | |
| AGTGATGTCCGACTTATTTC+AGG | - | chr5.1:52784215-52784234 | None:intergenic | 40.0% | |
| ATATGCCATCTTTCATGACC+AGG | + | chr5.1:52784315-52784334 | MS.gene43660:intron | 40.0% | |
| ATCACTGGTATGAGCAACAT+GGG | + | chr5.1:52784229-52784248 | MS.gene43660:intron | 40.0% | |
| ATCCTAAGTGGTTCATGTTC+TGG | + | chr5.1:52786238-52786257 | MS.gene43660:intron | 40.0% | |
| ATGAAGATTGAGGTTCGTGA+AGG | - | chr5.1:52781115-52781134 | None:intergenic | 40.0% | |
| ATGTGTGACTGTGACTACAT+AGG | + | chr5.1:52785919-52785938 | MS.gene43660:intron | 40.0% | |
| ATTGAGAGCAGTTATAAGGC+TGG | - | chr5.1:52785116-52785135 | None:intergenic | 40.0% | |
| ATTGAGTCTAGGTCAGTAAG+AGG | - | chr5.1:52785067-52785086 | None:intergenic | 40.0% | |
| ATTTCCCTGGTCATGAAAGA+TGG | - | chr5.1:52784323-52784342 | None:intergenic | 40.0% | |
| CAACACAGTATACCAACCTA+TGG | - | chr5.1:52781940-52781959 | None:intergenic | 40.0% | |
| CAACCTCCTCAAATATAAGG+GGG | - | chr5.1:52782385-52782404 | None:intergenic | 40.0% | |
| CAAGTTAGGACAGGTATAAG+TGG | + | chr5.1:52782431-52782450 | MS.gene43660:intron | 40.0% | |
| CCTAGGTTAGATAAGTAGCA+AGG | + | chr5.1:52786210-52786229 | MS.gene43660:intron | 40.0% | |
| CGAAGTCAAGAAATCCGATA+CGG | - | chr5.1:52785309-52785328 | None:intergenic | 40.0% | |
| CGTATCGGATTTCTTGACTT+CGG | + | chr5.1:52785307-52785326 | MS.gene43660:CDS | 40.0% | |
| CTGCAAATATTGAGGCTTTC+AGG | + | chr5.1:52784936-52784955 | MS.gene43660:CDS | 40.0% | |
| GAACACTTTCTCCAAATCTC+TGG | - | chr5.1:52785846-52785865 | None:intergenic | 40.0% | |
| GCTTAATGACTGATAGAACC+AGG | + | chr5.1:52786187-52786206 | MS.gene43660:intron | 40.0% | |
| GCTTCTTCTATTGGAAGCAA+TGG | - | chr5.1:52786969-52786988 | None:intergenic | 40.0% | |
| GTATACCAACCTATGGTCAT+GGG | - | chr5.1:52781933-52781952 | None:intergenic | 40.0% | |
| GTCGCTGTTTAGAAGACAAA+AGG | - | chr5.1:52785569-52785588 | None:intergenic | 40.0% | |
| GTCGTATATCTCCCAAAACA+TGG | + | chr5.1:52785708-52785727 | MS.gene43660:CDS | 40.0% | |
| GTTAAATAGCCCATGACCAT+AGG | + | chr5.1:52781921-52781940 | MS.gene43660:intron | 40.0% | |
| TACCTGTCCTAACTTGATGT+AGG | - | chr5.1:52782427-52782446 | None:intergenic | 40.0% | |
| TACTCAGCTGGAAATAGTGT+TGG | - | chr5.1:52783821-52783840 | None:intergenic | 40.0% | |
| TATATCTCCCAAAACATGGG+CGG | + | chr5.1:52785712-52785731 | MS.gene43660:CDS | 40.0% | |
| TATGCCATCTTTCATGACCA+GGG | + | chr5.1:52784316-52784335 | MS.gene43660:intron | 40.0% | |
| TCCCAATTTGAACATGCTTC+AGG | + | chr5.1:52786931-52786950 | MS.gene43660:CDS | 40.0% | |
| TGAAATAAGTCGGACATCAC+TGG | + | chr5.1:52784214-52784233 | MS.gene43660:CDS | 40.0% | |
| TGCATTCTGCTTGAATGATC+TGG | - | chr5.1:52786149-52786168 | None:intergenic | 40.0% | |
| TGCCATCTGTTAACTTTCCA+AGG | + | chr5.1:52785399-52785418 | MS.gene43660:intron | 40.0% | |
| TGTATCAAAACTGCAGTACG+CGG | + | chr5.1:52785008-52785027 | MS.gene43660:CDS | 40.0% | |
| TGTTGTGCTGAAATGGTTCA+TGG | + | chr5.1:52781589-52781608 | MS.gene43660:intron | 40.0% | |
| TTTCTCCAAATCTCTGGCAA+AGG | - | chr5.1:52785840-52785859 | None:intergenic | 40.0% | |
| ! | ACATTTAGGTTCATGGTGCA+AGG | + | chr5.1:52784072-52784091 | MS.gene43660:intron | 40.0% |
| ! | ATGTTAAAAGGGAAAGGCAC+AGG | - | chr5.1:52785178-52785197 | None:intergenic | 40.0% |
| ! | CCTTGCTACTTATCTAACCT+AGG | - | chr5.1:52786213-52786232 | None:intergenic | 40.0% |
| ! | GAATGCCCTATTTCTTGATG+TGG | + | chr5.1:52786530-52786549 | MS.gene43660:CDS | 40.0% |
| ! | TGTTAAAAGGGAAAGGCACA+GGG | - | chr5.1:52785177-52785196 | None:intergenic | 40.0% |
| !!! | AGCAGCTCTTGTATTTTGAC+CGG | + | chr5.1:52786891-52786910 | MS.gene43660:CDS | 40.0% |
| !!! | ATTGGGTTTTAGATGAGGGA+GGG | + | chr5.1:52782509-52782528 | MS.gene43660:intron | 40.0% |
| !!! | TATTGGGTTTTAGATGAGGG+AGG | + | chr5.1:52782508-52782527 | MS.gene43660:intron | 40.0% |
| !!! | TGTAGGGTTTTGGATAAGGA+AGG | + | chr5.1:52783382-52783401 | MS.gene43660:intron | 40.0% |
| !!! | TGTATTTTGACCGGTACACA+CGG | + | chr5.1:52786900-52786919 | MS.gene43660:CDS | 40.0% |
| AATAGCCCATGACCATAGGT+TGG | + | chr5.1:52781925-52781944 | MS.gene43660:intron | 45.0% | |
| AATCTGTGGCTTCTACGTGA+TGG | + | chr5.1:52785283-52785302 | MS.gene43660:CDS | 45.0% | |
| AGGAGGTTGTTTGAACGTCT+GGG | + | chr5.1:52782396-52782415 | MS.gene43660:CDS | 45.0% | |
| ATTCTCGCCAACTAATCCGA+GGG | - | chr5.1:52781388-52781407 | None:intergenic | 45.0% | |
| CAAGGAGGCTGCAAATATTG+AGG | + | chr5.1:52784928-52784947 | MS.gene43660:CDS | 45.0% | |
| CAGTCAACAAACTCATCTGC+TGG | + | chr5.1:52782327-52782346 | MS.gene43660:intron | 45.0% | |
| CATCACTGGTATGAGCAACA+TGG | + | chr5.1:52784228-52784247 | MS.gene43660:intron | 45.0% | |
| CTACTTATCTAACCTAGGCC+TGG | - | chr5.1:52786208-52786227 | None:intergenic | 45.0% | |
| GATTCACTAACCTGAACCTG+TGG | - | chr5.1:52786830-52786849 | None:intergenic | 45.0% | |
| GGAGTTGAAGGAAGAAACCT+TGG | - | chr5.1:52781209-52781228 | None:intergenic | 45.0% | |
| GGATATTGTCCAGACATCTG+TGG | + | chr5.1:52781672-52781691 | MS.gene43660:CDS | 45.0% | |
| GTCCAGAACATGAACCACTT+AGG | - | chr5.1:52786243-52786262 | None:intergenic | 45.0% | |
| GTGTCTATACACGTCTAGAC+AGG | - | chr5.1:52786109-52786128 | None:intergenic | 45.0% | |
| GTTCATGGTGCAAGGCTAAA+AGG | + | chr5.1:52784080-52784099 | MS.gene43660:CDS | 45.0% | |
| GTTCGACTACACTGATGCAA+AGG | + | chr5.1:52782097-52782116 | MS.gene43660:intron | 45.0% | |
| TAAGGCCTTTGCCAGAGATT+TGG | + | chr5.1:52785832-52785851 | MS.gene43660:CDS | 45.0% | |
| TAGCTATTATGGGGGGCTTA+TGG | + | chr5.1:52784769-52784788 | MS.gene43660:intron | 45.0% | |
| TCACTGGTATGAGCAACATG+GGG | + | chr5.1:52784230-52784249 | MS.gene43660:intron | 45.0% | |
| TGAACATGCTTCAGGATCAG+AGG | + | chr5.1:52786939-52786958 | MS.gene43660:CDS | 45.0% | |
| TGCTATAGAAGCGGAAGCAA+GGG | - | chr5.1:52783969-52783988 | None:intergenic | 45.0% | |
| TGCTGTCCCCCTTATATTTG+AGG | + | chr5.1:52782376-52782395 | MS.gene43660:CDS | 45.0% | |
| TGTCAGTGCTACAACTTGCA+AGG | + | chr5.1:52781480-52781499 | MS.gene43660:intron | 45.0% | |
| TGTCCCCCTTATATTTGAGG+AGG | + | chr5.1:52782379-52782398 | MS.gene43660:CDS | 45.0% | |
| TTCATGCAGATGTGCATGCT+GGG | + | chr5.1:52785260-52785279 | MS.gene43660:CDS | 45.0% | |
| TTTACCCAACCATCCCCAAA+TGG | - | chr5.1:52784640-52784659 | None:intergenic | 45.0% | |
| TTTCATGCAGATGTGCATGC+TGG | + | chr5.1:52785259-52785278 | MS.gene43660:CDS | 45.0% | |
| ! | AAGGTGTTCAAGCCTTCCTT+GGG | + | chr5.1:52781728-52781747 | MS.gene43660:CDS | 45.0% |
| ! | AGAAGAAGCGCAAATTCTCG+AGG | - | chr5.1:52786869-52786888 | None:intergenic | 45.0% |
| ! | AGCTCATCCAGTTCCTTTTG+AGG | + | chr5.1:52783871-52783890 | MS.gene43660:CDS | 45.0% |
| ! | GACACTATGATGGGGTTGTA+GGG | + | chr5.1:52783286-52783305 | MS.gene43660:intron | 45.0% |
| ! | GGTGTTCTTAGATTGGCTCA+AGG | + | chr5.1:52781709-52781728 | MS.gene43660:CDS | 45.0% |
| ! | GTGGTTAACGGATGTATCGA+AGG | + | chr5.1:52781762-52781781 | MS.gene43660:CDS | 45.0% |
| ! | TCCTCGAGGTGTTCTTAGAT+TGG | + | chr5.1:52781702-52781721 | MS.gene43660:CDS | 45.0% |
| ! | TGACACTATGATGGGGTTGT+AGG | + | chr5.1:52783285-52783304 | MS.gene43660:intron | 45.0% |
| ! | TTGTGCTGACCGAAATGCTA+AGG | + | chr5.1:52786567-52786586 | MS.gene43660:intron | 45.0% |
| !! | AGCTGGAAATAGTGTTGGTG+CGG | - | chr5.1:52783816-52783835 | None:intergenic | 45.0% |
| !! | ATGATGGGGTTGTAGGGTTT+TGG | + | chr5.1:52783292-52783311 | MS.gene43660:intron | 45.0% |
| !! | CAGTTATAAGGCTGGCTTCT+GGG | - | chr5.1:52785108-52785127 | None:intergenic | 45.0% |
| !! | TGTAGCACTGACACTTCTGA+TGG | - | chr5.1:52781473-52781492 | None:intergenic | 45.0% |
| !!! | AGGGTTTTGGATAAGGAAGG+AGG | + | chr5.1:52783385-52783404 | MS.gene43660:intron | 45.0% |
| !!! | GGGTTGTAGGGTTTTGGATA+AGG | + | chr5.1:52783298-52783317 | MS.gene43660:intron | 45.0% |
| !!! | GGGTTTTGGATAAGGAAGGA+GGG | + | chr5.1:52783386-52783405 | MS.gene43660:intron | 45.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | + | chr5.1:52783154-52783173 | MS.gene43660:intron | 5.0% |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | + | chr5.1:52783155-52783174 | MS.gene43660:intron | 5.0% |
| AAAAGGCTCACAGGAGGATG+TGG | + | chr5.1:52784097-52784116 | MS.gene43660:CDS | 50.0% | |
| AACTCCTGCGCTTGAATAGC+AGG | - | chr5.1:52786420-52786439 | None:intergenic | 50.0% | |
| AAGGCTAAAAGGCTCACAGG+AGG | + | chr5.1:52784091-52784110 | MS.gene43660:CDS | 50.0% | |
| ACAAGCAAAGAGGATGGAGG+AGG | - | chr5.1:52782469-52782488 | None:intergenic | 50.0% | |
| AGACCAAGCTGCAGTTCTGT+CGG | - | chr5.1:52782357-52782376 | None:intergenic | 50.0% | |
| AGGTGTTCAAGCCTTCCTTG+GGG | + | chr5.1:52781729-52781748 | MS.gene43660:CDS | 50.0% | |
| ATGTGCATGCTGGGAATCTG+TGG | + | chr5.1:52785269-52785288 | MS.gene43660:CDS | 50.0% | |
| CATTCTCGCCAACTAATCCG+AGG | - | chr5.1:52781389-52781408 | None:intergenic | 50.0% | |
| CTTCTACGTGATGGCCGTAT+CGG | + | chr5.1:52785292-52785311 | MS.gene43660:CDS | 50.0% | |
| GAAACCTTGGAATCGACGAG+AGG | - | chr5.1:52781196-52781215 | None:intergenic | 50.0% | |
| GACCAGTATCCACAGATGTC+TGG | - | chr5.1:52781684-52781703 | None:intergenic | 50.0% | |
| GAGGAGGTTGTTTGAACGTC+TGG | + | chr5.1:52782395-52782414 | MS.gene43660:CDS | 50.0% | |
| GAGGTTGTTTGAACGTCTGG+GGG | + | chr5.1:52782398-52782417 | MS.gene43660:CDS | 50.0% | |
| GATTGTCCTCCATTTGGGGA+TGG | + | chr5.1:52784628-52784647 | MS.gene43660:intron | 50.0% | |
| GCCAATCTAAGAACACCTCG+AGG | - | chr5.1:52781706-52781725 | None:intergenic | 50.0% | |
| GCGGCTATGGAAGTCTTCTT+AGG | + | chr5.1:52785731-52785750 | MS.gene43660:CDS | 50.0% | |
| GCTATAGAAGCGGAAGCAAG+GGG | - | chr5.1:52783968-52783987 | None:intergenic | 50.0% | |
| GGAGGTTGTTTGAACGTCTG+GGG | + | chr5.1:52782397-52782416 | MS.gene43660:CDS | 50.0% | |
| GGGGCAACCTACATCAAGTT+AGG | + | chr5.1:52782417-52782436 | MS.gene43660:CDS | 50.0% | |
| GGTCGGTCAAGAGTGGTTAA+CGG | + | chr5.1:52781750-52781769 | MS.gene43660:CDS | 50.0% | |
| GTCCAGACATCTGTGGATAC+TGG | + | chr5.1:52781679-52781698 | MS.gene43660:CDS | 50.0% | |
| GTGCGAAGTCTCACACAACA+TGG | - | chr5.1:52781443-52781462 | None:intergenic | 50.0% | |
| GTGCTATAGAAGCGGAAGCA+AGG | - | chr5.1:52783970-52783989 | None:intergenic | 50.0% | |
| TAGAAGCAATGGGGCTCACT+AGG | + | chr5.1:52784966-52784985 | MS.gene43660:CDS | 50.0% | |
| TCAGGGTTGAGAAGTAGCTG+CGG | + | chr5.1:52781045-52781064 | MS.gene43660:CDS | 50.0% | |
| TCCTCCATTTGGGGATGGTT+GGG | + | chr5.1:52784633-52784652 | MS.gene43660:intron | 50.0% | |
| TGACTGATAGAACCAGGCCT+AGG | + | chr5.1:52786193-52786212 | MS.gene43660:intron | 50.0% | |
| TGCAAGGCTAAAAGGCTCAC+AGG | + | chr5.1:52784088-52784107 | MS.gene43660:CDS | 50.0% | |
| TGCTATTCAAGCGCAGGAGT+TGG | + | chr5.1:52786419-52786438 | MS.gene43660:intron | 50.0% | |
| TGCTTCCGCTTCTATAGCAC+AGG | + | chr5.1:52783970-52783989 | MS.gene43660:CDS | 50.0% | |
| TTACCGACAGAACTGCAGCT+TGG | + | chr5.1:52782351-52782370 | MS.gene43660:CDS | 50.0% | |
| TTTGCCTGCTATTCAAGCGC+AGG | + | chr5.1:52786413-52786432 | MS.gene43660:intron | 50.0% | |
| ! | ACCATTGGTACAAGGGTGCA+AGG | - | chr5.1:52783760-52783779 | None:intergenic | 50.0% |
| ! | CAAGGTGTTCAAGCCTTCCT+TGG | + | chr5.1:52781727-52781746 | MS.gene43660:CDS | 50.0% |
| ! | TCCATAGCCGCCCATGTTTT+GGG | - | chr5.1:52785722-52785741 | None:intergenic | 50.0% |
| ! | TTCCATAGCCGCCCATGTTT+TGG | - | chr5.1:52785723-52785742 | None:intergenic | 50.0% |
| !! | GATTGGACCCTCGGATTAGT+TGG | + | chr5.1:52781378-52781397 | MS.gene43660:intron | 50.0% |
| !! | GCAGTTATAAGGCTGGCTTC+TGG | - | chr5.1:52785109-52785128 | None:intergenic | 50.0% |
| !! | TTCTCCTCTCGTCGATTCCA+AGG | + | chr5.1:52781189-52781208 | MS.gene43660:CDS | 50.0% |
| AACAACACCACCACCACTGG+TGG | + | chr5.1:52784469-52784488 | MS.gene43660:intron | 55.0% | |
| ACAACACCACCACCACTGGT+GGG | + | chr5.1:52784470-52784489 | MS.gene43660:intron | 55.0% | |
| ACCCAACCATCCCCAAATGG+AGG | - | chr5.1:52784637-52784656 | None:intergenic | 55.0% | |
| CCGTCCACTTGCAGACAACA+CGG | - | chr5.1:52781355-52781374 | None:intergenic | 55.0% | |
| CCGTGTTGTCTGCAAGTGGA+CGG | + | chr5.1:52781352-52781371 | MS.gene43660:intron | 55.0% | |
| CTGCAAGTGGACGGTGTGAT+TGG | + | chr5.1:52781361-52781380 | MS.gene43660:intron | 55.0% | |
| GAGCCAACAACCGTGTGTAC+CGG | - | chr5.1:52786913-52786932 | None:intergenic | 55.0% | |
| GCCTTGCACCCTTGTACCAA+TGG | + | chr5.1:52783756-52783775 | MS.gene43660:intron | 55.0% | |
| GTCAACAACACCACCACCAC+TGG | + | chr5.1:52784466-52784485 | MS.gene43660:intron | 55.0% | |
| GTCCTCCATTTGGGGATGGT+TGG | + | chr5.1:52784632-52784651 | MS.gene43660:intron | 55.0% | |
| GTGTCCGTGTTGTCTGCAAG+TGG | + | chr5.1:52781348-52781367 | MS.gene43660:intron | 55.0% | |
| GTTCAAGCCTTCCTTGGGGT+CGG | + | chr5.1:52781733-52781752 | MS.gene43660:CDS | 55.0% | |
| TCCCAAAACATGGGCGGCTA+TGG | + | chr5.1:52785718-52785737 | MS.gene43660:CDS | 55.0% | |
| TCTGTGGATACTGGTCCTCG+AGG | + | chr5.1:52781688-52781707 | MS.gene43660:CDS | 55.0% | |
| TGACCGGTACACACGGTTGT+TGG | + | chr5.1:52786907-52786926 | MS.gene43660:CDS | 55.0% | |
| !! | AAGCGGAAGCAAGGGGTGTT+GGG | - | chr5.1:52783961-52783980 | None:intergenic | 55.0% |
| ACCACTCTTGACCGACCCCA+AGG | - | chr5.1:52781747-52781766 | None:intergenic | 60.0% | |
| CAACACCACCACCACTGGTG+GGG | + | chr5.1:52784471-52784490 | MS.gene43660:intron | 60.0% | |
| CTCTTGACCGACCCCAAGGA+AGG | - | chr5.1:52781743-52781762 | None:intergenic | 60.0% | |
| GGACGGTGTGATTGGACCCT+CGG | + | chr5.1:52781369-52781388 | MS.gene43660:intron | 60.0% | |
| TCCTTGGGGTCGGTCAAGAG+TGG | + | chr5.1:52781743-52781762 | MS.gene43660:CDS | 60.0% | |
| ! | AGCAAGGGGCGCATCCTAAG+TGG | + | chr5.1:52786226-52786245 | MS.gene43660:intron | 60.0% |
| ! | GAAGCGGAAGCAAGGGGTGT+TGG | - | chr5.1:52783962-52783981 | None:intergenic | 60.0% |
| ACCACCACCACTGGTGGGGT+CGG | + | chr5.1:52784475-52784494 | MS.gene43660:intron | 65.0% | |
| TCATGAGCCGACCCCACCAG+TGG | - | chr5.1:52784485-52784504 | None:intergenic | 65.0% | |
| TGAGCCGACCCCACCAGTGG+TGG | - | chr5.1:52784482-52784501 | None:intergenic | 70.0% | |
| GCCGACCCCACCAGTGGTGG+TGG | - | chr5.1:52784479-52784498 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 52781036 | 52787000 | 52781036 | ID=MS.gene43660 |
| chr5.1 | mRNA | 52781036 | 52787000 | 52781036 | ID=MS.gene43660.t1;Parent=MS.gene43660 |
| chr5.1 | exon | 52781036 | 52781210 | 52781036 | ID=MS.gene43660.t1.exon1;Parent=MS.gene43660.t1 |
| chr5.1 | CDS | 52781036 | 52781210 | 52781036 | ID=cds.MS.gene43660.t1;Parent=MS.gene43660.t1 |
| chr5.1 | exon | 52781641 | 52781783 | 52781641 | ID=MS.gene43660.t1.exon2;Parent=MS.gene43660.t1 |
| chr5.1 | CDS | 52781641 | 52781783 | 52781641 | ID=cds.MS.gene43660.t1;Parent=MS.gene43660.t1 |
| chr5.1 | exon | 52782330 | 52782443 | 52782330 | ID=MS.gene43660.t1.exon3;Parent=MS.gene43660.t1 |
| chr5.1 | CDS | 52782330 | 52782443 | 52782330 | ID=cds.MS.gene43660.t1;Parent=MS.gene43660.t1 |
| chr5.1 | exon | 52783803 | 52783991 | 52783803 | ID=MS.gene43660.t1.exon4;Parent=MS.gene43660.t1 |
| chr5.1 | CDS | 52783803 | 52783991 | 52783803 | ID=cds.MS.gene43660.t1;Parent=MS.gene43660.t1 |
| chr5.1 | exon | 52784080 | 52784235 | 52784080 | ID=MS.gene43660.t1.exon5;Parent=MS.gene43660.t1 |
| chr5.1 | CDS | 52784080 | 52784235 | 52784080 | ID=cds.MS.gene43660.t1;Parent=MS.gene43660.t1 |
| chr5.1 | exon | 52784875 | 52785140 | 52784875 | ID=MS.gene43660.t1.exon6;Parent=MS.gene43660.t1 |
| chr5.1 | CDS | 52784875 | 52785140 | 52784875 | ID=cds.MS.gene43660.t1;Parent=MS.gene43660.t1 |
| chr5.1 | exon | 52785231 | 52785328 | 52785231 | ID=MS.gene43660.t1.exon7;Parent=MS.gene43660.t1 |
| chr5.1 | CDS | 52785231 | 52785328 | 52785231 | ID=cds.MS.gene43660.t1;Parent=MS.gene43660.t1 |
| chr5.1 | exon | 52785699 | 52785877 | 52785699 | ID=MS.gene43660.t1.exon8;Parent=MS.gene43660.t1 |
| chr5.1 | CDS | 52785699 | 52785877 | 52785699 | ID=cds.MS.gene43660.t1;Parent=MS.gene43660.t1 |
| chr5.1 | exon | 52786435 | 52786551 | 52786435 | ID=MS.gene43660.t1.exon9;Parent=MS.gene43660.t1 |
| chr5.1 | CDS | 52786435 | 52786551 | 52786435 | ID=cds.MS.gene43660.t1;Parent=MS.gene43660.t1 |
| chr5.1 | exon | 52786833 | 52787000 | 52786833 | ID=MS.gene43660.t1.exon10;Parent=MS.gene43660.t1 |
| chr5.1 | CDS | 52786833 | 52787000 | 52786833 | ID=cds.MS.gene43660.t1;Parent=MS.gene43660.t1 |
| Gene Sequence |
| Protein sequence |
