Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88880.t1 | XP_003592016.1 | 98.3 | 300 | 5 | 0 | 1 | 300 | 1 | 300 | 1.70E-137 | 498.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88880.t1 | Q9SV84 | 65.1 | 281 | 88 | 3 | 25 | 300 | 29 | 304 | 9.5e-84 | 311.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88880.t1 | G7IAK3 | 98.3 | 300 | 5 | 0 | 1 | 300 | 1 | 300 | 1.3e-137 | 498.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene88880 | -0.844357 | 7.95E-59 | -1.69E-46 |
| MS.gene049217 | MS.gene88880 | -0.817328 | 3.49E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene88880 | -0.819701 | 1.01E-52 | -1.69E-46 |
| MS.gene049265 | MS.gene88880 | 0.806935 | 6.46E-50 | -1.69E-46 |
| MS.gene049281 | MS.gene88880 | 0.817215 | 3.70E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene88880 | -0.812798 | 3.54E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene88880 | -0.827555 | 1.47E-54 | -1.69E-46 |
| MS.gene049549 | MS.gene88880 | 0.825471 | 4.60E-54 | -1.69E-46 |
| MS.gene049611 | MS.gene88880 | 0.822059 | 2.90E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene88880 | -0.811812 | 5.81E-51 | -1.69E-46 |
| MS.gene049634 | MS.gene88880 | 0.817924 | 2.56E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene88880 | -0.821972 | 3.04E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene88880 | -0.821545 | 3.81E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene88880 | -0.815914 | 7.24E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene88880 | -0.804569 | 2.03E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene88880 | 0.829831 | 4.13E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene88880 | -0.802994 | 4.31E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene88880 | -0.811703 | 6.13E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene88880 | -0.833855 | 4.20E-56 | -1.69E-46 |
| MS.gene050518 | MS.gene88880 | -0.800379 | 1.48E-48 | -1.69E-46 |
| MS.gene050577 | MS.gene88880 | -0.821817 | 3.30E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene88880 | -0.841171 | 5.59E-58 | -1.69E-46 |
| MS.gene050647 | MS.gene88880 | 0.826984 | 2.01E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene88880 | -0.835687 | 1.45E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene88880 | -0.828313 | 9.64E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene88880 | -0.803369 | 3.60E-49 | -1.69E-46 |
| MS.gene05079 | MS.gene88880 | 0.803823 | 2.90E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene88880 | -0.804851 | 1.77E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene88880 | -0.802788 | 4.75E-49 | -1.69E-46 |
| MS.gene050883 | MS.gene88880 | 0.812492 | 4.13E-51 | -1.69E-46 |
| MS.gene051044 | MS.gene88880 | 0.818153 | 2.27E-52 | -1.69E-46 |
| MS.gene05104 | MS.gene88880 | 0.811393 | 7.16E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene88880 | 0.846043 | 2.78E-59 | -1.69E-46 |
| MS.gene051131 | MS.gene88880 | 0.819024 | 1.44E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene88880 | 0.833405 | 5.43E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene88880 | -0.811293 | 7.53E-51 | -1.69E-46 |
| MS.gene051364 | MS.gene88880 | 0.86288 | 3.71E-64 | -1.69E-46 |
| MS.gene051366 | MS.gene88880 | 0.856321 | 3.48E-62 | -1.69E-46 |
| MS.gene051367 | MS.gene88880 | 0.822504 | 2.29E-53 | -1.69E-46 |
| MS.gene051422 | MS.gene88880 | 0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene051632 | MS.gene88880 | 0.833527 | 5.07E-56 | -1.69E-46 |
| MS.gene051651 | MS.gene88880 | 0.812507 | 4.09E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene88880 | -0.80983 | 1.56E-50 | -1.69E-46 |
| MS.gene051973 | MS.gene88880 | 0.829721 | 4.39E-55 | -1.69E-46 |
| MS.gene052211 | MS.gene88880 | 0.819083 | 1.40E-52 | -1.69E-46 |
| MS.gene05240 | MS.gene88880 | 0.812625 | 3.86E-51 | -1.69E-46 |
| MS.gene05244 | MS.gene88880 | 0.830287 | 3.20E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene88880 | -0.803269 | 3.78E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene88880 | -0.803667 | 3.13E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene88880 | 0.857307 | 1.78E-62 | -1.69E-46 |
| MS.gene052615 | MS.gene88880 | -0.808344 | 3.24E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene88880 | -0.806066 | 9.85E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene88880 | -0.804518 | 2.08E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene88880 | -0.813402 | 2.61E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene88880 | 0.858182 | 9.82E-63 | -1.69E-46 |
| MS.gene053421 | MS.gene88880 | 0.812499 | 4.11E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene88880 | -0.802822 | 4.67E-49 | -1.69E-46 |
| MS.gene053488 | MS.gene88880 | 0.814097 | 1.83E-51 | -1.69E-46 |
| MS.gene053887 | MS.gene88880 | 0.821049 | 4.96E-53 | -1.69E-46 |
| MS.gene054146 | MS.gene88880 | 0.817838 | 2.68E-52 | -1.69E-46 |
| MS.gene054290 | MS.gene88880 | 0.813982 | 1.94E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene88880 | -0.801673 | 8.06E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene88880 | 0.82586 | 3.72E-54 | -1.69E-46 |
| MS.gene054707 | MS.gene88880 | 0.819659 | 1.03E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene88880 | -0.840982 | 6.26E-58 | -1.69E-46 |
| MS.gene054884 | MS.gene88880 | 0.816862 | 4.44E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene88880 | -0.817129 | 3.87E-52 | -1.69E-46 |
| MS.gene054959 | MS.gene88880 | 0.809662 | 1.69E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene88880 | 0.819677 | 1.02E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene88880 | 0.85576 | 5.08E-62 | -1.69E-46 |
| MS.gene055202 | MS.gene88880 | 0.817398 | 3.37E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene88880 | -0.805995 | 1.02E-49 | -1.69E-46 |
| MS.gene055240 | MS.gene88880 | 0.803198 | 3.91E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene88880 | -0.823852 | 1.11E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene88880 | -0.849004 | 4.27E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene88880 | -0.840368 | 9.07E-58 | -1.69E-46 |
| MS.gene055748 | MS.gene88880 | -0.812309 | 4.52E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene88880 | -0.81073 | 9.97E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene88880 | -0.835066 | 2.08E-56 | -1.69E-46 |
| MS.gene055942 | MS.gene88880 | 0.804092 | 2.55E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene88880 | 0.802196 | 6.29E-49 | -1.69E-46 |
| MS.gene056224 | MS.gene88880 | 0.833736 | 4.49E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene88880 | -0.837152 | 6.15E-57 | -1.69E-46 |
| MS.gene056590 | MS.gene88880 | 0.852302 | 5.05E-61 | -1.69E-46 |
| MS.gene056591 | MS.gene88880 | 0.848923 | 4.50E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene88880 | -0.805058 | 1.60E-49 | -1.69E-46 |
| MS.gene056692 | MS.gene88880 | -0.83444 | 2.99E-56 | -1.69E-46 |
| MS.gene056697 | MS.gene88880 | 0.810116 | 1.35E-50 | -1.69E-46 |
| MS.gene056748 | MS.gene88880 | 0.861443 | 1.02E-63 | -1.69E-46 |
| MS.gene056856 | MS.gene88880 | 0.870667 | 1.23E-66 | -1.69E-46 |
| MS.gene056988 | MS.gene88880 | 0.825572 | 4.36E-54 | -1.69E-46 |
| MS.gene057261 | MS.gene88880 | 0.823716 | 1.19E-53 | -1.69E-46 |
| MS.gene057544 | MS.gene88880 | 0.848198 | 7.14E-60 | -1.69E-46 |
| MS.gene057548 | MS.gene88880 | 0.806718 | 7.18E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene88880 | 0.831795 | 1.36E-55 | -1.69E-46 |
| MS.gene057768 | MS.gene88880 | 0.825421 | 4.73E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene88880 | -0.806108 | 9.66E-50 | -1.69E-46 |
| MS.gene058068 | MS.gene88880 | 0.830946 | 2.20E-55 | -1.69E-46 |
| MS.gene058093 | MS.gene88880 | 0.81626 | 6.06E-52 | -1.69E-46 |
| MS.gene058099 | MS.gene88880 | 0.832615 | 8.54E-56 | -1.69E-46 |
| MS.gene058109 | MS.gene88880 | 0.819102 | 1.39E-52 | -1.69E-46 |
| MS.gene058111 | MS.gene88880 | 0.831966 | 1.24E-55 | -1.69E-46 |
| MS.gene058117 | MS.gene88880 | 0.82325 | 1.53E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene88880 | 0.830323 | 3.13E-55 | -1.69E-46 |
| MS.gene058173 | MS.gene88880 | 0.815638 | 8.34E-52 | -1.69E-46 |
| MS.gene058175 | MS.gene88880 | 0.828665 | 7.92E-55 | -1.69E-46 |
| MS.gene058268 | MS.gene88880 | 0.834603 | 2.73E-56 | -1.69E-46 |
| MS.gene058269 | MS.gene88880 | 0.826843 | 2.17E-54 | -1.69E-46 |
| MS.gene058334 | MS.gene88880 | 0.849609 | 2.90E-60 | -1.69E-46 |
| MS.gene05837 | MS.gene88880 | -0.824795 | 6.65E-54 | -1.69E-46 |
| MS.gene058382 | MS.gene88880 | 0.80009 | 1.70E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene88880 | -0.848888 | 4.60E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene88880 | -0.828712 | 7.72E-55 | -1.69E-46 |
| MS.gene058603 | MS.gene88880 | 0.839025 | 2.03E-57 | -1.69E-46 |
| MS.gene058838 | MS.gene88880 | -0.829102 | 6.21E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene88880 | -0.83051 | 2.82E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene88880 | -0.830526 | 2.79E-55 | -1.69E-46 |
| MS.gene059045 | MS.gene88880 | 0.810399 | 1.18E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene88880 | -0.814892 | 1.22E-51 | -1.69E-46 |
| MS.gene059315 | MS.gene88880 | 0.820261 | 7.53E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene88880 | -0.841943 | 3.50E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene88880 | -0.822419 | 2.39E-53 | -1.69E-46 |
| MS.gene059756 | MS.gene88880 | -0.817401 | 3.36E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene88880 | -0.822573 | 2.20E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene88880 | -0.811875 | 5.62E-51 | -1.69E-46 |
| MS.gene059953 | MS.gene88880 | 0.840321 | 9.33E-58 | -1.69E-46 |
| MS.gene059955 | MS.gene88880 | 0.845979 | 2.90E-59 | -1.69E-46 |
| MS.gene060405 | MS.gene88880 | 0.824289 | 8.75E-54 | -1.69E-46 |
| MS.gene060593 | MS.gene88880 | 0.826476 | 2.66E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene88880 | 0.817156 | 3.82E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene88880 | -0.83924 | 1.78E-57 | -1.69E-46 |
| MS.gene060778 | MS.gene88880 | -0.811781 | 5.90E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene88880 | -0.838731 | 2.42E-57 | -1.69E-46 |
| MS.gene060823 | MS.gene88880 | 0.815299 | 9.93E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene88880 | -0.818611 | 1.79E-52 | -1.69E-46 |
| MS.gene061044 | MS.gene88880 | 0.835859 | 1.31E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene88880 | -0.811724 | 6.07E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene56256 | MS.gene88880 | PPI |
| MS.gene63514 | MS.gene88880 | PPI |
| MS.gene009458 | MS.gene88880 | PPI |
| MS.gene51627 | MS.gene88880 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88880.t1 | MTR_1g097840 | 98.333 | 300 | 5 | 0 | 1 | 300 | 1 | 300 | 0.0 | 596 |
| MS.gene88880.t1 | MTR_1g097840 | 98.729 | 236 | 3 | 0 | 1 | 236 | 1 | 236 | 3.88e-168 | 467 |
| MS.gene88880.t1 | MTR_4g006730 | 59.220 | 282 | 112 | 1 | 9 | 287 | 7 | 288 | 6.31e-114 | 331 |
| MS.gene88880.t1 | MTR_2g104940 | 57.877 | 292 | 105 | 3 | 13 | 290 | 11 | 298 | 1.38e-107 | 315 |
| MS.gene88880.t1 | MTR_4g006630 | 70.647 | 201 | 59 | 0 | 87 | 287 | 1 | 201 | 1.90e-98 | 288 |
| MS.gene88880.t1 | MTR_4g006730 | 70.149 | 201 | 60 | 0 | 87 | 287 | 1 | 201 | 1.01e-97 | 286 |
| MS.gene88880.t1 | MTR_4g006730 | 57.576 | 231 | 95 | 1 | 9 | 236 | 7 | 237 | 8.29e-85 | 256 |
| MS.gene88880.t1 | MTR_8g087710 | 48.193 | 249 | 114 | 4 | 52 | 297 | 21 | 257 | 1.01e-69 | 218 |
| MS.gene88880.t1 | MTR_8g087720 | 49.785 | 233 | 106 | 3 | 71 | 300 | 35 | 259 | 2.12e-69 | 216 |
| MS.gene88880.t1 | MTR_2g017570 | 45.421 | 273 | 126 | 5 | 35 | 300 | 3 | 259 | 4.78e-67 | 211 |
| MS.gene88880.t1 | MTR_2g017610 | 47.600 | 250 | 112 | 4 | 54 | 300 | 26 | 259 | 6.27e-67 | 210 |
| MS.gene88880.t1 | MTR_2g017660 | 50.673 | 223 | 108 | 2 | 62 | 283 | 28 | 249 | 1.43e-66 | 209 |
| MS.gene88880.t1 | MTR_2g017590 | 48.718 | 234 | 109 | 3 | 70 | 300 | 32 | 257 | 1.47e-65 | 207 |
| MS.gene88880.t1 | MTR_7g010650 | 45.205 | 219 | 120 | 0 | 72 | 290 | 35 | 253 | 8.15e-65 | 205 |
| MS.gene88880.t1 | MTR_2g017620 | 48.696 | 230 | 113 | 2 | 74 | 300 | 38 | 265 | 2.16e-64 | 204 |
| MS.gene88880.t1 | MTR_2g017620 | 48.696 | 230 | 113 | 2 | 74 | 300 | 24 | 251 | 2.17e-64 | 203 |
| MS.gene88880.t1 | MTR_4g084880 | 44.492 | 236 | 118 | 4 | 70 | 300 | 31 | 258 | 7.65e-61 | 195 |
| MS.gene88880.t1 | MTR_5g063930 | 40.072 | 277 | 140 | 6 | 28 | 299 | 6 | 261 | 1.58e-58 | 188 |
| MS.gene88880.t1 | MTR_2g017620 | 49.468 | 188 | 86 | 2 | 118 | 300 | 1 | 184 | 1.93e-54 | 176 |
| MS.gene88880.t1 | MTR_4g006650 | 64.539 | 141 | 41 | 1 | 75 | 215 | 5 | 136 | 6.73e-53 | 176 |
| MS.gene88880.t1 | MTR_5g079570 | 43.056 | 216 | 121 | 2 | 69 | 283 | 35 | 249 | 1.22e-51 | 171 |
| MS.gene88880.t1 | MTR_1g070385 | 43.304 | 224 | 127 | 0 | 69 | 292 | 57 | 280 | 3.01e-51 | 180 |
| MS.gene88880.t1 | MTR_3g008920 | 41.004 | 239 | 135 | 4 | 47 | 283 | 1 | 235 | 6.68e-49 | 164 |
| MS.gene88880.t1 | MTR_8g087720 | 50.888 | 169 | 78 | 2 | 71 | 236 | 35 | 201 | 3.77e-46 | 154 |
| MS.gene88880.t1 | MTR_8g087720 | 48.322 | 149 | 72 | 2 | 71 | 216 | 35 | 181 | 1.24e-34 | 125 |
| MS.gene88880.t1 | MTR_7g010650 | 41.379 | 145 | 85 | 0 | 72 | 216 | 35 | 179 | 1.51e-33 | 122 |
| MS.gene88880.t1 | MTR_2g101370 | 39.189 | 222 | 114 | 7 | 69 | 275 | 15 | 230 | 5.12e-31 | 117 |
| MS.gene88880.t1 | MTR_1g006490 | 36.916 | 214 | 116 | 7 | 74 | 275 | 19 | 225 | 3.28e-28 | 109 |
| MS.gene88880.t1 | MTR_8g013680 | 37.089 | 213 | 113 | 7 | 78 | 275 | 23 | 229 | 1.12e-27 | 108 |
| MS.gene88880.t1 | MTR_1g006590 | 35.981 | 214 | 118 | 7 | 74 | 275 | 19 | 225 | 1.77e-27 | 107 |
| MS.gene88880.t1 | MTR_1g115405 | 33.333 | 228 | 132 | 7 | 78 | 291 | 25 | 246 | 1.47e-22 | 94.4 |
| MS.gene88880.t1 | MTR_5g012810 | 33.333 | 234 | 134 | 5 | 78 | 298 | 23 | 247 | 3.39e-21 | 90.5 |
| MS.gene88880.t1 | MTR_2g094270 | 30.677 | 251 | 148 | 7 | 71 | 297 | 37 | 285 | 3.76e-19 | 85.9 |
| MS.gene88880.t1 | MTR_4g063090 | 32.870 | 216 | 123 | 8 | 79 | 279 | 26 | 234 | 9.29e-19 | 84.0 |
| MS.gene88880.t1 | MTR_7g023350 | 31.140 | 228 | 137 | 7 | 78 | 291 | 25 | 246 | 1.82e-18 | 83.2 |
| MS.gene88880.t1 | MTR_6g069040 | 28.571 | 224 | 149 | 4 | 78 | 293 | 25 | 245 | 7.03e-18 | 81.6 |
| MS.gene88880.t1 | MTR_7g103030 | 31.250 | 224 | 143 | 6 | 78 | 292 | 25 | 246 | 2.76e-17 | 80.1 |
| MS.gene88880.t1 | MTR_1g077540 | 30.357 | 224 | 145 | 5 | 78 | 293 | 25 | 245 | 1.05e-16 | 78.6 |
| MS.gene88880.t1 | MTR_3g118010 | 29.060 | 234 | 148 | 7 | 66 | 282 | 29 | 261 | 5.11e-16 | 77.0 |
| MS.gene88880.t1 | MTR_2g094270 | 30.476 | 210 | 124 | 5 | 71 | 259 | 37 | 245 | 1.44e-15 | 75.5 |
| MS.gene88880.t1 | MTR_2g060360 | 33.714 | 175 | 96 | 5 | 127 | 293 | 77 | 239 | 6.36e-15 | 73.6 |
| MS.gene88880.t1 | MTR_4g415300 | 27.143 | 280 | 180 | 11 | 27 | 285 | 6 | 282 | 9.23e-14 | 70.5 |
| MS.gene88880.t1 | MTR_3g070210 | 26.577 | 222 | 146 | 6 | 78 | 282 | 59 | 280 | 1.41e-13 | 70.1 |
| MS.gene88880.t1 | MTR_8g098375 | 29.204 | 226 | 140 | 8 | 78 | 285 | 56 | 279 | 1.83e-13 | 69.7 |
| MS.gene88880.t1 | MTR_7g101190 | 27.309 | 249 | 158 | 7 | 71 | 297 | 36 | 283 | 2.07e-13 | 69.7 |
| MS.gene88880.t1 | MTR_5g082070 | 24.727 | 275 | 189 | 6 | 28 | 285 | 9 | 282 | 2.11e-13 | 69.7 |
| MS.gene88880.t1 | MTR_5g010150 | 28.319 | 226 | 142 | 8 | 78 | 285 | 56 | 279 | 1.01e-12 | 67.4 |
| MS.gene88880.t1 | MTR_4g059390 | 25.591 | 254 | 166 | 7 | 66 | 297 | 31 | 283 | 3.77e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88880.t1 | AT4G10380 | 70.463 | 281 | 73 | 3 | 25 | 300 | 29 | 304 | 1.26e-141 | 401 |
| MS.gene88880.t1 | AT1G80760 | 57.667 | 300 | 118 | 4 | 9 | 300 | 7 | 305 | 5.94e-111 | 323 |
| MS.gene88880.t1 | AT4G19030 | 49.167 | 240 | 108 | 3 | 69 | 300 | 50 | 283 | 1.23e-68 | 216 |
| MS.gene88880.t1 | AT5G37820 | 43.173 | 271 | 138 | 4 | 35 | 300 | 11 | 270 | 1.38e-68 | 215 |
| MS.gene88880.t1 | AT5G37820 | 43.866 | 269 | 139 | 4 | 35 | 300 | 47 | 306 | 3.14e-68 | 215 |
| MS.gene88880.t1 | AT5G37810 | 42.066 | 271 | 141 | 4 | 35 | 300 | 11 | 270 | 2.62e-67 | 212 |
| MS.gene88880.t1 | AT4G18910 | 46.694 | 242 | 111 | 3 | 69 | 300 | 47 | 280 | 2.90e-65 | 207 |
| MS.gene88880.t1 | AT1G31885 | 50.224 | 223 | 103 | 2 | 69 | 283 | 38 | 260 | 1.36e-64 | 206 |
| MS.gene88880.t1 | AT1G31885 | 49.029 | 206 | 97 | 2 | 86 | 283 | 1 | 206 | 4.31e-57 | 185 |
| MS.gene88880.t1 | AT2G34390 | 43.777 | 233 | 117 | 4 | 69 | 291 | 43 | 271 | 3.02e-52 | 173 |
| MS.gene88880.t1 | AT2G34390 | 43.172 | 227 | 115 | 4 | 75 | 291 | 7 | 229 | 1.85e-50 | 167 |
| MS.gene88880.t1 | AT3G06100 | 44.762 | 210 | 113 | 3 | 78 | 285 | 50 | 258 | 2.65e-47 | 160 |
| MS.gene88880.t1 | AT3G06100 | 44.340 | 212 | 115 | 3 | 78 | 287 | 2 | 212 | 3.01e-47 | 158 |
| MS.gene88880.t1 | AT4G19030 | 49.143 | 175 | 81 | 2 | 69 | 235 | 50 | 224 | 3.31e-45 | 153 |
| MS.gene88880.t1 | AT4G18910 | 48.315 | 178 | 80 | 2 | 69 | 236 | 47 | 222 | 2.82e-44 | 150 |
| MS.gene88880.t1 | AT4G19030 | 46.795 | 156 | 75 | 2 | 69 | 216 | 50 | 205 | 1.96e-34 | 125 |
| MS.gene88880.t1 | AT2G34390 | 41.573 | 178 | 91 | 3 | 69 | 236 | 43 | 217 | 6.12e-32 | 118 |
| MS.gene88880.t1 | AT3G16240 | 38.028 | 213 | 111 | 8 | 78 | 275 | 23 | 229 | 9.96e-29 | 110 |
| MS.gene88880.t1 | AT2G29870 | 50.980 | 102 | 49 | 1 | 190 | 291 | 22 | 122 | 6.53e-26 | 100 |
| MS.gene88880.t1 | AT2G34390 | 40.625 | 160 | 82 | 3 | 69 | 218 | 43 | 199 | 2.34e-25 | 101 |
| MS.gene88880.t1 | AT5G47450 | 35.146 | 239 | 129 | 8 | 69 | 286 | 14 | 247 | 1.94e-24 | 99.4 |
| MS.gene88880.t1 | AT2G25810 | 36.842 | 209 | 113 | 7 | 79 | 275 | 24 | 225 | 4.90e-24 | 98.6 |
| MS.gene88880.t1 | AT4G17340 | 35.849 | 212 | 117 | 6 | 78 | 275 | 23 | 229 | 6.40e-24 | 98.2 |
| MS.gene88880.t1 | AT3G06100 | 39.855 | 138 | 82 | 1 | 149 | 285 | 40 | 177 | 1.94e-22 | 92.8 |
| MS.gene88880.t1 | AT2G36830 | 34.783 | 230 | 128 | 8 | 78 | 292 | 25 | 247 | 7.12e-22 | 92.8 |
| MS.gene88880.t1 | AT3G26520 | 33.186 | 226 | 133 | 7 | 78 | 290 | 26 | 246 | 1.38e-21 | 92.0 |
| MS.gene88880.t1 | AT4G01470 | 31.760 | 233 | 129 | 8 | 78 | 291 | 25 | 246 | 3.32e-19 | 85.5 |
| MS.gene88880.t1 | AT1G17810 | 29.258 | 229 | 148 | 5 | 78 | 293 | 28 | 255 | 1.90e-17 | 80.9 |
| MS.gene88880.t1 | AT1G31885 | 50.000 | 80 | 40 | 0 | 69 | 148 | 38 | 117 | 2.40e-17 | 77.4 |
| MS.gene88880.t1 | AT4G35100 | 29.032 | 248 | 159 | 6 | 66 | 297 | 30 | 276 | 8.88e-17 | 79.0 |
| MS.gene88880.t1 | AT4G35100 | 29.032 | 248 | 159 | 6 | 66 | 297 | 30 | 276 | 8.88e-17 | 79.0 |
| MS.gene88880.t1 | AT2G16850 | 29.386 | 228 | 145 | 5 | 71 | 282 | 33 | 260 | 9.42e-16 | 76.3 |
| MS.gene88880.t1 | AT1G73190 | 28.509 | 228 | 147 | 5 | 78 | 292 | 28 | 252 | 1.21e-15 | 75.9 |
| MS.gene88880.t1 | AT3G53420 | 27.037 | 270 | 170 | 8 | 52 | 297 | 17 | 283 | 7.85e-15 | 73.6 |
| MS.gene88880.t1 | AT3G53420 | 27.037 | 270 | 170 | 8 | 52 | 297 | 17 | 283 | 7.85e-15 | 73.6 |
| MS.gene88880.t1 | AT5G60660 | 27.311 | 238 | 146 | 8 | 72 | 285 | 37 | 271 | 4.61e-14 | 71.6 |
| MS.gene88880.t1 | AT2G37170 | 27.092 | 251 | 156 | 8 | 71 | 297 | 34 | 281 | 1.34e-13 | 70.1 |
| MS.gene88880.t1 | AT2G37170 | 26.908 | 249 | 159 | 7 | 71 | 297 | 77 | 324 | 2.70e-13 | 69.7 |
| MS.gene88880.t1 | AT3G54820 | 27.111 | 225 | 140 | 7 | 71 | 272 | 35 | 258 | 9.64e-13 | 67.8 |
| MS.gene88880.t1 | AT2G37180 | 26.104 | 249 | 161 | 7 | 71 | 297 | 34 | 281 | 2.75e-12 | 66.2 |
| MS.gene88880.t1 | AT2G45960 | 28.444 | 225 | 142 | 8 | 78 | 285 | 56 | 278 | 5.24e-12 | 65.5 |
| MS.gene88880.t1 | AT3G61430 | 28.000 | 225 | 143 | 8 | 78 | 285 | 56 | 278 | 8.04e-12 | 65.1 |
| MS.gene88880.t1 | AT3G61430 | 28.000 | 225 | 143 | 8 | 78 | 285 | 56 | 278 | 8.04e-12 | 65.1 |
| MS.gene88880.t1 | AT1G01620 | 27.488 | 211 | 137 | 6 | 78 | 272 | 56 | 266 | 1.54e-11 | 64.3 |
| MS.gene88880.t1 | AT3G47440 | 27.876 | 226 | 140 | 6 | 78 | 287 | 27 | 245 | 1.55e-11 | 63.9 |
| MS.gene88880.t1 | AT4G00430 | 27.232 | 224 | 146 | 7 | 78 | 285 | 57 | 279 | 2.64e-11 | 63.5 |
| MS.gene88880.t1 | AT4G23400 | 27.556 | 225 | 144 | 8 | 78 | 285 | 57 | 279 | 2.82e-11 | 63.5 |
Find 88 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGCATCTCTGGATATATT+TGG | 0.216287 | 1.1:+70392993 | MS.gene88880:CDS |
| GGTGTCCCTGACTCCGATTC+TGG | 0.274084 | 1.1:-70388157 | None:intergenic |
| TTGTATTTGTTGTTCACTAT+TGG | 0.275818 | 1.1:-70391938 | None:intergenic |
| CAATGGAGTAGAAACTCTTA+TGG | 0.319532 | 1.1:+70391958 | MS.gene88880:CDS |
| CTTGGTGCTCTAGCTGGTTC+TGG | 0.336743 | 1.1:+70393027 | MS.gene88880:CDS |
| TTGCTCAACATTCTTATCTC+AGG | 0.361959 | 1.1:+70392550 | MS.gene88880:CDS |
| GAACATGTGCCCACGGGAAA+TGG | 0.378646 | 1.1:-70392090 | None:intergenic |
| ATGAATCCGGTGCGCACCTT+AGG | 0.389490 | 1.1:+70392946 | MS.gene88880:CDS |
| GTTTACCATCCTTTCCTCTC+TGG | 0.391500 | 1.1:+70392172 | MS.gene88880:CDS |
| TGCAATGCAGGTTGGTGAAT+TGG | 0.400837 | 1.1:+70392501 | MS.gene88880:intron |
| ATGTTCATTATTCTATCAAT+TGG | 0.408502 | 1.1:+70392010 | MS.gene88880:CDS |
| ATCACTCACCATTGCCTTCG+CGG | 0.410120 | 1.1:+70392060 | MS.gene88880:CDS |
| TAAGGTGCGCACCGGATTCA+TGG | 0.410875 | 1.1:-70392944 | None:intergenic |
| CAGGAAATTACAAGCATCTC+TGG | 0.418374 | 1.1:+70392983 | MS.gene88880:CDS |
| TAATTTCCTGCTGCAACGGC+TGG | 0.421426 | 1.1:-70392970 | None:intergenic |
| CCGACGCTTGGTGCTCTAGC+TGG | 0.422426 | 1.1:+70393021 | MS.gene88880:CDS |
| AAAATGCCAGAATCGGAGTC+AGG | 0.425265 | 1.1:+70388151 | None:intergenic |
| AATGGCCCTCCGGGAGTATC+CGG | 0.425506 | 1.1:-70388205 | None:intergenic |
| TGCATCGCTAATTTCTCTGC+TGG | 0.426344 | 1.1:+70388322 | MS.gene88880:CDS |
| ATTCTTATAGATGAGAATAA+TGG | 0.431504 | 1.1:-70388223 | None:intergenic |
| CGGAGCTGAACCACCTCAAC+CGG | 0.432157 | 1.1:+70393080 | MS.gene88880:CDS |
| TGCTGCAACGGCTGGACCTA+AGG | 0.434795 | 1.1:-70392962 | None:intergenic |
| GTTATCAAGCTTCGTGATAA+CGG | 0.441696 | 1.1:+70393060 | MS.gene88880:CDS |
| CAACGTGAGTCATTTGCAAT+GGG | 0.443310 | 1.1:+70388259 | MS.gene88880:CDS |
| CTATCAATTGGTCATATCTC+AGG | 0.449732 | 1.1:+70392022 | MS.gene88880:CDS |
| ATGGGAAATGCAGCTTGTGC+TGG | 0.464614 | 1.1:+70391977 | MS.gene88880:CDS |
| AATGGAGTAGAAACTCTTAT+GGG | 0.469616 | 1.1:+70391959 | MS.gene88880:CDS |
| TTCATGGAACCACCACTTGT+TGG | 0.473364 | 1.1:-70392928 | None:intergenic |
| CTGAACCACCTCAACCGGTT+AGG | 0.481691 | 1.1:+70393085 | MS.gene88880:CDS |
| AAGTGGTGGTTCCATGAATC+CGG | 0.485536 | 1.1:+70392933 | MS.gene88880:CDS |
| TAGCGATGGAAGCTCCTAAC+CGG | 0.490530 | 1.1:-70393099 | None:intergenic |
| CTTGTAATTTCCTGCTGCAA+CGG | 0.491803 | 1.1:-70392974 | None:intergenic |
| CGGCGTTTCGCCATTTCCCG+TGG | 0.493217 | 1.1:+70392080 | MS.gene88880:CDS |
| ACTTGTGCTGCAATGTAGGC+TGG | 0.494118 | 1.1:-70392112 | None:intergenic |
| GAGGTGCAACATGTGTATGC+CGG | 0.494142 | 1.1:+70388282 | MS.gene88880:CDS |
| ACAGATTGGAGCAGAGTTTG+TGG | 0.494648 | 1.1:+70391880 | MS.gene88880:intron |
| TATTTGGTGGCACCGACGCT+TGG | 0.495981 | 1.1:+70393009 | MS.gene88880:CDS |
| TTAGGTCCAGCCGTTGCAGC+AGG | 0.497485 | 1.1:+70392964 | MS.gene88880:CDS |
| AGGTGCAACATGTGTATGCC+GGG | 0.499379 | 1.1:+70388283 | MS.gene88880:CDS |
| TACCATCCTTTCCTCTCTGG+TGG | 0.500750 | 1.1:+70392175 | MS.gene88880:CDS |
| TGGAAGCTCCTAACCGGTTG+AGG | 0.502143 | 1.1:-70393093 | None:intergenic |
| TGCTCAACATTCTTATCTCA+GGG | 0.505305 | 1.1:+70392551 | MS.gene88880:CDS |
| AGCGTCGGTGCCGGCGACAC+CGG | 0.511138 | 1.1:+70388186 | MS.gene88880:CDS |
| CAGATTGGAGCAGAGTTTGT+GGG | 0.519331 | 1.1:+70391881 | MS.gene88880:intron |
| GAATTGGCTGGTATTGCTGT+TGG | 0.524769 | 1.1:+70392517 | MS.gene88880:CDS |
| GATGAGAATAATGGCCCTCC+GGG | 0.524874 | 1.1:-70388214 | None:intergenic |
| AGATGAGAATAATGGCCCTC+CGG | 0.525358 | 1.1:-70388215 | None:intergenic |
| AAGTGTCTCTCTTTCTCAGA+AGG | 0.536928 | 1.1:+70388357 | MS.gene88880:CDS |
| CCGGGAGTATCCGGTGTCGC+CGG | 0.538656 | 1.1:-70388196 | None:intergenic |
| AGAGACTTGTGCTGCAATGT+AGG | 0.541162 | 1.1:-70392116 | None:intergenic |
| ACCGACGGCAGCGTCGGTGC+CGG | 0.542854 | 1.1:+70388177 | MS.gene88880:CDS |
| TCAACGTGAGTCATTTGCAA+TGG | 0.548537 | 1.1:+70388258 | MS.gene88880:CDS |
| TGCGCTTGTTATGCGCTCAA+AGG | 0.549531 | 1.1:+70392148 | MS.gene88880:CDS |
| GGCGTTTCGCCATTTCCCGT+GGG | 0.558137 | 1.1:+70392081 | MS.gene88880:CDS |
| GCGAAACGCCGCGAAGGCAA+TGG | 0.561703 | 1.1:-70392068 | None:intergenic |
| GTCGCAGCCAGCTCTAGCGA+TGG | 0.563389 | 1.1:-70393113 | None:intergenic |
| TTCTGAGAAAGAGAGACACT+TGG | 0.567115 | 1.1:-70388355 | None:intergenic |
| GCTTGTCCAACGCTAACAGT+AGG | 0.567496 | 1.1:-70392208 | None:intergenic |
| GCCGGCACCGACGCTGCCGT+CGG | 0.571291 | 1.1:-70388178 | None:intergenic |
| CTAATATATGCAGCAACAGC+AGG | 0.571804 | 1.1:+70391914 | MS.gene88880:CDS |
| AAATGCCAGAATCGGAGTCA+GGG | 0.577507 | 1.1:+70388152 | None:intergenic |
| GTTATCACGAAGCTTGATAA+CGG | 0.579391 | 1.1:-70393058 | None:intergenic |
| CCGGCGACACCGGATACTCC+CGG | 0.580871 | 1.1:+70388196 | MS.gene88880:CDS |
| CTTGTCCAACGCTAACAGTA+GGG | 0.582924 | 1.1:-70392207 | None:intergenic |
| GCGAAGGCAATGGTGAGTGA+TGG | 0.584999 | 1.1:-70392058 | None:intergenic |
| GCATCTCTGGATATATTTGG+TGG | 0.589329 | 1.1:+70392996 | MS.gene88880:CDS |
| GAAATGGCGAAACGCCGCGA+AGG | 0.592464 | 1.1:-70392074 | None:intergenic |
| ATGCAGGTTGGTGAATTGGC+TGG | 0.597369 | 1.1:+70392505 | MS.gene88880:intron |
| ATGAATTGAACGTACCGCAC+GGG | 0.604011 | 1.1:-70392296 | None:intergenic |
| GCTGGACCTAAGGTGCGCAC+CGG | 0.614709 | 1.1:-70392952 | None:intergenic |
| TAGGCTGGAACATGTGCCCA+CGG | 0.616186 | 1.1:-70392097 | None:intergenic |
| ACTGTCCCTACTGTTAGCGT+TGG | 0.619097 | 1.1:+70392202 | MS.gene88880:CDS |
| ATAGTGAACAACAAATACAA+TGG | 0.626790 | 1.1:+70391941 | MS.gene88880:CDS |
| CCAGCTAGAGCACCAAGCGT+CGG | 0.629619 | 1.1:-70393021 | None:intergenic |
| AATGCTAGGCCAACAAGTGG+TGG | 0.629751 | 1.1:+70392919 | MS.gene88880:intron |
| AGGCTGGAACATGTGCCCAC+GGG | 0.634760 | 1.1:-70392096 | None:intergenic |
| CACCACCAGAGAGGAAAGGA+TGG | 0.636860 | 1.1:-70392177 | None:intergenic |
| AGGGACACCGACGGCAGCGT+CGG | 0.638264 | 1.1:+70388171 | MS.gene88880:CDS |
| GTGAGTCATTTGCAATGGGG+AGG | 0.644380 | 1.1:+70388263 | MS.gene88880:CDS |
| GTGACACCACCAGAGAGGAA+AGG | 0.645575 | 1.1:-70392181 | None:intergenic |
| AAGCTCCTAACCGGTTGAGG+TGG | 0.652704 | 1.1:-70393090 | None:intergenic |
| ATCGGAGTCAGGGACACCGA+CGG | 0.669278 | 1.1:+70388162 | MS.gene88880:CDS |
| GTAAATGCTAGGCCAACAAG+TGG | 0.679378 | 1.1:+70392916 | MS.gene88880:intron |
| CGACACCGGATACTCCCGGA+GGG | 0.703914 | 1.1:+70388200 | MS.gene88880:CDS |
| AACGTGAGTCATTTGCAATG+GGG | 0.719998 | 1.1:+70388260 | MS.gene88880:CDS |
| GGACAGTGACACCACCAGAG+AGG | 0.725765 | 1.1:-70392186 | None:intergenic |
| GCGACACCGGATACTCCCGG+AGG | 0.726349 | 1.1:+70388199 | MS.gene88880:CDS |
| TGTTGCTACTGATTCCCGTG+CGG | 0.778451 | 1.1:+70392282 | MS.gene88880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTAATTTAATTAACAATT+GGG | + | chr1.1:70389079-70389098 | MS.gene88880:intron | 10.0% |
| !! | TAAAATAAAAAAGATTAATG+CGG | + | chr1.1:70390121-70390140 | MS.gene88880:intron | 10.0% |
| !! | TAGTTAATTTAATTAACAAT+TGG | + | chr1.1:70389078-70389097 | MS.gene88880:intron | 10.0% |
| !! | TTATATTGAAATGAAATATA+TGG | + | chr1.1:70389680-70389699 | MS.gene88880:intron | 10.0% |
| !!! | ATTTCAATATATAATTTTGT+CGG | + | chr1.1:70389732-70389751 | MS.gene88880:intron | 10.0% |
| !!! | TAATAAAAAAATTGTTTTCA+AGG | - | chr1.1:70389456-70389475 | None:intergenic | 10.0% |
| !!! | TACTTTTCTTTTTTAAAATA+CGG | - | chr1.1:70390707-70390726 | None:intergenic | 10.0% |
| !! | AAAACTATTCAATATACTTT+CGG | - | chr1.1:70390019-70390038 | None:intergenic | 15.0% |
| !! | AGAAAAAATATAGTTTCTAT+CGG | - | chr1.1:70388911-70388930 | None:intergenic | 15.0% |
| !! | ATTCAGACAAAATTTATATT+CGG | - | chr1.1:70392752-70392771 | None:intergenic | 15.0% |
| !! | CTTTATTAGATAAAAATGAT+CGG | - | chr1.1:70388681-70388700 | None:intergenic | 15.0% |
| !!! | AAATAGATAGCATTTTTTTA+GGG | + | chr1.1:70388571-70388590 | MS.gene88880:intron | 15.0% |
| !!! | AACTTATTGATTTATGAAAT+AGG | - | chr1.1:70388657-70388676 | None:intergenic | 15.0% |
| !!! | GAAATTACATAGATTTTTTT+TGG | + | chr1.1:70391286-70391305 | MS.gene88880:intron | 15.0% |
| !!! | GAATGTATATTTTTTTTTGA+AGG | - | chr1.1:70389370-70389389 | None:intergenic | 15.0% |
| !!! | TAAAAAAGTTGATTAAATGA+GGG | + | chr1.1:70390817-70390836 | MS.gene88880:intron | 15.0% |
| !!! | TAAGCAAAAATTGATTTTTT+AGG | + | chr1.1:70390338-70390357 | MS.gene88880:intron | 15.0% |
| !!! | TATAAGTTGTTTGTTTTTTT+TGG | - | chr1.1:70391438-70391457 | None:intergenic | 15.0% |
| !!! | TTAAAAAAGTTGATTAAATG+AGG | + | chr1.1:70390816-70390835 | MS.gene88880:intron | 15.0% |
| !! | AAACTCAAAGTTTAAGTATT+CGG | - | chr1.1:70390868-70390887 | None:intergenic | 20.0% |
| !! | ACAAAATTAAATCAACTACA+TGG | - | chr1.1:70391521-70391540 | None:intergenic | 20.0% |
| !! | ATGTTCATTATTCTATCAAT+TGG | + | chr1.1:70392010-70392029 | MS.gene88880:CDS | 20.0% |
| !! | ATTACAAATACAAAAACAAG+TGG | - | chr1.1:70389110-70389129 | None:intergenic | 20.0% |
| !! | ATTCTTATAGATGAGAATAA+TGG | - | chr1.1:70388226-70388245 | None:intergenic | 20.0% |
| !! | ATTGTTTAAACAACTAAAAG+TGG | - | chr1.1:70391180-70391199 | None:intergenic | 20.0% |
| !! | GTACTAATAGTATATAACAT+TGG | - | chr1.1:70389017-70389036 | None:intergenic | 20.0% |
| !! | TACATATACTATATTACACA+CGG | - | chr1.1:70389489-70389508 | None:intergenic | 20.0% |
| !!! | AAAAAAGTTGATTAAATGAG+GGG | + | chr1.1:70390818-70390837 | MS.gene88880:intron | 20.0% |
| !!! | AAATGTATTTTGACATAGAT+GGG | + | chr1.1:70389760-70389779 | MS.gene88880:intron | 20.0% |
| !!! | AAATTTCAAGTTCTCTAAAT+TGG | + | chr1.1:70392396-70392415 | MS.gene88880:intron | 20.0% |
| !!! | AACATGTTTGATATTTTCTT+AGG | - | chr1.1:70390776-70390795 | None:intergenic | 20.0% |
| !!! | AATTTCAAGTTCTCTAAATT+GGG | + | chr1.1:70392397-70392416 | MS.gene88880:intron | 20.0% |
| !!! | ACATGTTTGATATTTTCTTA+GGG | - | chr1.1:70390775-70390794 | None:intergenic | 20.0% |
| !!! | AGGAAATAAATTTTATTTGC+TGG | - | chr1.1:70389392-70389411 | None:intergenic | 20.0% |
| !!! | ATTCAATGATAATGTTTCAA+AGG | + | chr1.1:70392662-70392681 | MS.gene88880:intron | 20.0% |
| !!! | ATTGAGTTTTTTATGAGTTA+AGG | + | chr1.1:70392446-70392465 | MS.gene88880:intron | 20.0% |
| !!! | ATTTAATTTTGTAAGCTTTG+GGG | + | chr1.1:70391529-70391548 | MS.gene88880:intron | 20.0% |
| !!! | CAAATAGATAGCATTTTTTT+AGG | + | chr1.1:70388570-70388589 | MS.gene88880:intron | 20.0% |
| !!! | GATTTAATTTTGTAAGCTTT+GGG | + | chr1.1:70391528-70391547 | MS.gene88880:intron | 20.0% |
| !!! | TACTTTTCCTTTTTCATTAA+GGG | - | chr1.1:70391825-70391844 | None:intergenic | 20.0% |
| !!! | TAGGATTTATTTTTTTTGAG+AGG | + | chr1.1:70390957-70390976 | MS.gene88880:intron | 20.0% |
| !!! | TCTATTTGATATTTTAGTCA+AGG | - | chr1.1:70388558-70388577 | None:intergenic | 20.0% |
| !!! | TGATGTTATTGATTTGTATT+TGG | + | chr1.1:70392596-70392615 | MS.gene88880:intron | 20.0% |
| !!! | TGATTTAATTTTGTAAGCTT+TGG | + | chr1.1:70391527-70391546 | MS.gene88880:intron | 20.0% |
| !!! | TTACTTTTCCTTTTTCATTA+AGG | - | chr1.1:70391826-70391845 | None:intergenic | 20.0% |
| !!! | TTGTATTTGGTTTTCATAAT+AGG | + | chr1.1:70392609-70392628 | MS.gene88880:intron | 20.0% |
| !!! | TTTTTATTTCTCAAAAGTGT+CGG | - | chr1.1:70388868-70388887 | None:intergenic | 20.0% |
| !!! | TTTTTCCAAAAATCTACATT+TGG | + | chr1.1:70391695-70391714 | MS.gene88880:intron | 20.0% |
| !!! | TTTTTGTTTGCTTCTTTTTT+AGG | - | chr1.1:70389412-70389431 | None:intergenic | 20.0% |
| ! | AATGTTATAGGGAATTTCTA+CGG | + | chr1.1:70388601-70388620 | MS.gene88880:intron | 25.0% |
| ! | AGGGAATAGATAATGTTATA+GGG | + | chr1.1:70388590-70388609 | MS.gene88880:intron | 25.0% |
| ! | ATAGTGAACAACAAATACAA+TGG | + | chr1.1:70391941-70391960 | MS.gene88880:CDS | 25.0% |
| ! | ATCATGAAAAACTATTCCTA+AGG | + | chr1.1:70392690-70392709 | MS.gene88880:intron | 25.0% |
| ! | CTATGTCAAAATACATTTGA+AGG | - | chr1.1:70389758-70389777 | None:intergenic | 25.0% |
| ! | CTCAAAAAAATTAAGTGTAC+CGG | - | chr1.1:70388978-70388997 | None:intergenic | 25.0% |
| ! | TAACATCAATTCATGAGAAA+AGG | - | chr1.1:70392584-70392603 | None:intergenic | 25.0% |
| ! | TAGGGAATAGATAATGTTAT+AGG | + | chr1.1:70388589-70388608 | MS.gene88880:intron | 25.0% |
| ! | TATAACATTGGCAATTTCTA+CGG | - | chr1.1:70389005-70389024 | None:intergenic | 25.0% |
| ! | TGATGTATGTAGTCTATATA+TGG | - | chr1.1:70390390-70390409 | None:intergenic | 25.0% |
| ! | TGTCAAATGTTATATTCAGT+TGG | + | chr1.1:70392638-70392657 | MS.gene88880:intron | 25.0% |
| !! | AAACAGTCTCAAAGTATTTA+TGG | - | chr1.1:70391383-70391402 | None:intergenic | 25.0% |
| !! | AACCAAATGGAATTAATTTG+TGG | - | chr1.1:70388463-70388482 | None:intergenic | 25.0% |
| !! | AATTTTGTCTGAATAATGAC+AGG | + | chr1.1:70392758-70392777 | MS.gene88880:intron | 25.0% |
| !! | ATCTCTCTCTTTATGATTTT+TGG | + | chr1.1:70388384-70388403 | MS.gene88880:intron | 25.0% |
| !! | ATGTTCCAAATGTAGATTTT+TGG | - | chr1.1:70391703-70391722 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr1.1:70390328-70390347 | None:intergenic | 25.0% |
| !!! | ACCAAATGGAATTAATTTGT+GGG | - | chr1.1:70388462-70388481 | None:intergenic | 25.0% |
| !!! | ACTTTTCCTTTTTCATTAAG+GGG | - | chr1.1:70391824-70391843 | None:intergenic | 25.0% |
| !!! | AGGAGGTATATATTTTACTA+AGG | + | chr1.1:70390512-70390531 | MS.gene88880:intron | 25.0% |
| !!! | ATTTTTTTTGAGAGGAACTT+GGG | + | chr1.1:70390965-70390984 | MS.gene88880:intron | 25.0% |
| !!! | CAAATGTATTTTGACATAGA+TGG | + | chr1.1:70389759-70389778 | MS.gene88880:intron | 25.0% |
| !!! | GGAGGTATATATTTTACTAA+GGG | + | chr1.1:70390513-70390532 | MS.gene88880:intron | 25.0% |
| !!! | GGTTCGACTTTTTTTTTTAA+GGG | + | chr1.1:70390986-70391005 | MS.gene88880:intron | 25.0% |
| !!! | GTTAAGGTTGTTTTAATTCA+TGG | + | chr1.1:70392462-70392481 | MS.gene88880:intron | 25.0% |
| !!! | TATTTTTGTATATGCAATGC+AGG | + | chr1.1:70392489-70392508 | MS.gene88880:intron | 25.0% |
| !!! | TATTTTTTTTGAGAGGAACT+TGG | + | chr1.1:70390964-70390983 | MS.gene88880:intron | 25.0% |
| !!! | TTGTATTTGTTGTTCACTAT+TGG | - | chr1.1:70391941-70391960 | None:intergenic | 25.0% |
| !!! | TTTTTGGAAAAATCCACATT+TGG | - | chr1.1:70391687-70391706 | None:intergenic | 25.0% |
| !!! | TTTTTTAAGGGAATGAACTT+GGG | + | chr1.1:70390998-70391017 | MS.gene88880:intron | 25.0% |
| !!! | TTTTTTTAAGGGAATGAACT+TGG | + | chr1.1:70390997-70391016 | MS.gene88880:intron | 25.0% |
| !!! | TTTTTTTTGAAGGAATTTGC+TGG | - | chr1.1:70389360-70389379 | None:intergenic | 25.0% |
| AACAAATGCAACTAGTAACA+TGG | - | chr1.1:70389955-70389974 | None:intergenic | 30.0% | |
| AATGGAGTAGAAACTCTTAT+GGG | + | chr1.1:70391959-70391978 | MS.gene88880:CDS | 30.0% | |
| ACAAATGCAACTAGTAACAT+GGG | - | chr1.1:70389954-70389973 | None:intergenic | 30.0% | |
| ACCAGTACACCTTAATTTAA+GGG | - | chr1.1:70388631-70388650 | None:intergenic | 30.0% | |
| ATATGACAGCCAAAATTTCA+GGG | + | chr1.1:70390466-70390485 | MS.gene88880:intron | 30.0% | |
| CATTTAATTCATGAGTGTAC+CGG | + | chr1.1:70388956-70388975 | MS.gene88880:intron | 30.0% | |
| GGATTAGAATAATGTGACAA+TGG | - | chr1.1:70391802-70391821 | None:intergenic | 30.0% | |
| GTCAGATTTAACTGTTTCAT+GGG | + | chr1.1:70388496-70388515 | MS.gene88880:intron | 30.0% | |
| GTCATGTCATTAAAAACCTT+AGG | - | chr1.1:70392709-70392728 | None:intergenic | 30.0% | |
| TAAATAGTATTGTTTGCACG+TGG | + | chr1.1:70389198-70389217 | MS.gene88880:intron | 30.0% | |
| TAAGATTGTGAGTAATGTTG+TGG | + | chr1.1:70392891-70392910 | MS.gene88880:intron | 30.0% | |
| TACCAGTACACCTTAATTTA+AGG | - | chr1.1:70388632-70388651 | None:intergenic | 30.0% | |
| TAGGTTAACAAGTGTCATAA+GGG | + | chr1.1:70391094-70391113 | MS.gene88880:intron | 30.0% | |
| TATATGACAGCCAAAATTTC+AGG | + | chr1.1:70390465-70390484 | MS.gene88880:intron | 30.0% | |
| TGTTAAAATGTGTCACAGAT+TGG | + | chr1.1:70391866-70391885 | MS.gene88880:intron | 30.0% | |
| TTAGAGAACTTGAAATTTCG+CGG | - | chr1.1:70392394-70392413 | None:intergenic | 30.0% | |
| TTAGGTTAACAAGTGTCATA+AGG | + | chr1.1:70391093-70391112 | MS.gene88880:intron | 30.0% | |
| TTCAAAAGTTCTCCAAACAA+AGG | + | chr1.1:70391491-70391510 | MS.gene88880:intron | 30.0% | |
| ! | AGGAGTATGAGTTAAGTAAA+TGG | - | chr1.1:70390305-70390324 | None:intergenic | 30.0% |
| ! | ATATTTTCTTAGGGTGTGTT+TGG | - | chr1.1:70390766-70390785 | None:intergenic | 30.0% |
| ! | ATGTTTTCTCAATATCAAGG+AGG | + | chr1.1:70390495-70390514 | MS.gene88880:intron | 30.0% |
| ! | CTTTTGCTTATAATAGTGAC+CGG | + | chr1.1:70390436-70390455 | MS.gene88880:intron | 30.0% |
| ! | CTTTTGCTTATAATAGTGAC+CGG | - | chr1.1:70390455-70390436 | None:intergenic | 30.0% |
| ! | GACATGTTTTCTCAATATCA+AGG | + | chr1.1:70390492-70390511 | MS.gene88880:intron | 30.0% |
| !! | AAATGGAATTAATTTGTGGG+CGG | - | chr1.1:70388459-70388478 | None:intergenic | 30.0% |
| !! | CTTTTCCTTTTTCATTAAGG+GGG | - | chr1.1:70391823-70391842 | None:intergenic | 30.0% |
| !! | TATATTTTACTAAGGGTGTG+TGG | + | chr1.1:70390520-70390539 | MS.gene88880:intron | 30.0% |
| !!! | GGGTTCGACTTTTTTTTTTA+AGG | + | chr1.1:70390985-70391004 | MS.gene88880:intron | 30.0% |
| !!! | TTTTGACATAGATGGGTTAT+TGG | + | chr1.1:70389767-70389786 | MS.gene88880:intron | 30.0% |
| AACATTCTTATCTCAGGGTA+TGG | + | chr1.1:70392556-70392575 | MS.gene88880:intron | 35.0% | |
| ACCCTTAAATTAAGGTGTAC+TGG | + | chr1.1:70388627-70388646 | MS.gene88880:intron | 35.0% | |
| AGCATTGCTTGAGTTATTAG+TGG | + | chr1.1:70391606-70391625 | MS.gene88880:intron | 35.0% | |
| ATATTCGGAGACTAACTTGA+TGG | - | chr1.1:70392737-70392756 | None:intergenic | 35.0% | |
| ATCGTGTCAATCTGAAAACT+TGG | + | chr1.1:70390932-70390951 | MS.gene88880:intron | 35.0% | |
| ATGTTGTGGTTGTAAATGCT+AGG | + | chr1.1:70392905-70392924 | MS.gene88880:intron | 35.0% | |
| CAAGCATCTCTGGATATATT+TGG | + | chr1.1:70392993-70393012 | MS.gene88880:CDS | 35.0% | |
| CAATGGAGTAGAAACTCTTA+TGG | + | chr1.1:70391958-70391977 | MS.gene88880:CDS | 35.0% | |
| CACATAGAATGTTCCAAATG+TGG | + | chr1.1:70391671-70391690 | MS.gene88880:intron | 35.0% | |
| CTAATCCCCCTTAATGAAAA+AGG | + | chr1.1:70391815-70391834 | MS.gene88880:intron | 35.0% | |
| CTACATGGTTAACCTTTGTT+TGG | - | chr1.1:70391506-70391525 | None:intergenic | 35.0% | |
| CTATCAATTGGTCATATCTC+AGG | + | chr1.1:70392022-70392041 | MS.gene88880:CDS | 35.0% | |
| GAAACAGTGCAAAAACATGT+AGG | + | chr1.1:70389849-70389868 | MS.gene88880:intron | 35.0% | |
| GCCCACAAATTAATTCCATT+TGG | + | chr1.1:70388458-70388477 | MS.gene88880:intron | 35.0% | |
| GGTCAGATTTAACTGTTTCA+TGG | + | chr1.1:70388495-70388514 | MS.gene88880:intron | 35.0% | |
| GTAGAATGAAAGAGCTACTT+TGG | - | chr1.1:70391737-70391756 | None:intergenic | 35.0% | |
| GTTATCAAGCTTCGTGATAA+CGG | + | chr1.1:70393060-70393079 | MS.gene88880:CDS | 35.0% | |
| GTTATCACGAAGCTTGATAA+CGG | - | chr1.1:70393061-70393080 | None:intergenic | 35.0% | |
| TAAACGTGAACGAGTTGTTA+AGG | + | chr1.1:70390043-70390062 | MS.gene88880:intron | 35.0% | |
| TACGGTACACCCTTAAATTA+AGG | + | chr1.1:70388619-70388638 | MS.gene88880:intron | 35.0% | |
| TCAATCTGAAAACTTGGGTT+AGG | + | chr1.1:70390938-70390957 | MS.gene88880:intron | 35.0% | |
| TCGTGTCAATCTGAAAACTT+GGG | + | chr1.1:70390933-70390952 | MS.gene88880:intron | 35.0% | |
| TGCTCAACATTCTTATCTCA+GGG | + | chr1.1:70392551-70392570 | MS.gene88880:CDS | 35.0% | |
| TGTAGGATATTAAGCTACAC+TGG | + | chr1.1:70389866-70389885 | MS.gene88880:intron | 35.0% | |
| TGTGTTTGGATTGAGAGTTT+AGG | - | chr1.1:70390752-70390771 | None:intergenic | 35.0% | |
| TTACTTAACTCATACTCCTC+CGG | + | chr1.1:70390306-70390325 | MS.gene88880:intron | 35.0% | |
| TTGCTCAACATTCTTATCTC+AGG | + | chr1.1:70392550-70392569 | MS.gene88880:CDS | 35.0% | |
| TTTGGATTGAGAGTTTAGGA+GGG | - | chr1.1:70390748-70390767 | None:intergenic | 35.0% | |
| TTTGTATATGCAATGCAGGT+TGG | + | chr1.1:70392493-70392512 | MS.gene88880:intron | 35.0% | |
| ! | AAGTTGATTAAATGAGGGGT+AGG | + | chr1.1:70390822-70390841 | MS.gene88880:intron | 35.0% |
| ! | GAATGATGATGTGTGTACAT+AGG | + | chr1.1:70391555-70391574 | MS.gene88880:intron | 35.0% |
| ! | TTAAGCTACACTGGTTATCT+TGG | + | chr1.1:70389875-70389894 | MS.gene88880:intron | 35.0% |
| !! | AGAGCTACTTTGGAGTTTAT+TGG | - | chr1.1:70391727-70391746 | None:intergenic | 35.0% |
| !! | CAACTATTGCTTTTATCACC+CGG | - | chr1.1:70388304-70388323 | None:intergenic | 35.0% |
| !! | TGTCATAAGGGCATTGTTTA+AGG | + | chr1.1:70391106-70391125 | MS.gene88880:intron | 35.0% |
| !!! | GATTTTTGGTCAACGAGTTT+TGG | + | chr1.1:70388398-70388417 | MS.gene88880:intron | 35.0% |
| AACGTGAGTCATTTGCAATG+GGG | + | chr1.1:70388260-70388279 | MS.gene88880:CDS | 40.0% | |
| AAGTGTCTCTCTTTCTCAGA+AGG | + | chr1.1:70388357-70388376 | MS.gene88880:CDS | 40.0% | |
| AATGAATTGAACGTACCGCA+CGG | - | chr1.1:70392300-70392319 | None:intergenic | 40.0% | |
| AGTTTAGGAGGGAAAAGGAA+GGG | - | chr1.1:70390737-70390756 | None:intergenic | 40.0% | |
| ATGGAGAGTTTAAGAGAGGA+TGG | + | chr1.1:70390543-70390562 | MS.gene88880:intron | 40.0% | |
| CAACGTGAGTCATTTGCAAT+GGG | + | chr1.1:70388259-70388278 | MS.gene88880:CDS | 40.0% | |
| CAGGAAATTACAAGCATCTC+TGG | + | chr1.1:70392983-70393002 | MS.gene88880:CDS | 40.0% | |
| CATGCAAGCTAGAAACCAAA+TGG | - | chr1.1:70388476-70388495 | None:intergenic | 40.0% | |
| CTAATATATGCAGCAACAGC+AGG | + | chr1.1:70391914-70391933 | MS.gene88880:CDS | 40.0% | |
| CTTGTAATTTCCTGCTGCAA+CGG | - | chr1.1:70392977-70392996 | None:intergenic | 40.0% | |
| GCATCTCTGGATATATTTGG+TGG | + | chr1.1:70392996-70393015 | MS.gene88880:CDS | 40.0% | |
| GTCTGAATAATGACAGGATC+AGG | + | chr1.1:70392764-70392783 | MS.gene88880:intron | 40.0% | |
| GTGATGAGATGTGCATGATT+GGG | + | chr1.1:70389156-70389175 | MS.gene88880:intron | 40.0% | |
| GTTTGGATTGAGAGTTTAGG+AGG | - | chr1.1:70390749-70390768 | None:intergenic | 40.0% | |
| TCAACGTGAGTCATTTGCAA+TGG | + | chr1.1:70388258-70388277 | MS.gene88880:CDS | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr1.1:70390459-70390440 | None:intergenic | 40.0% | |
| TGGAGAGTTTAAGAGAGGAT+GGG | + | chr1.1:70390544-70390563 | MS.gene88880:intron | 40.0% | |
| TGTGATGAGATGTGCATGAT+TGG | + | chr1.1:70389155-70389174 | MS.gene88880:intron | 40.0% | |
| TTGAGAGTTTAGGAGGGAAA+AGG | - | chr1.1:70390742-70390761 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr1.1:70390439-70390458 | MS.gene88880:intron | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr1.1:70390458-70390439 | None:intergenic | 40.0% | |
| ! | GGGAGTACGAGTTAAGTAAA+TGG | - | chr1.1:70390148-70390167 | None:intergenic | 40.0% |
| ! | TTCTGAGAAAGAGAGACACT+TGG | - | chr1.1:70388358-70388377 | None:intergenic | 40.0% |
| !! | CATTTGGTTTCTAGCTTGCA+TGG | + | chr1.1:70388474-70388493 | MS.gene88880:intron | 40.0% |
| !! | TTTCGCGGCAACTTTTTAAG+TGG | - | chr1.1:70392379-70392398 | None:intergenic | 40.0% |
| !! | TTTTACTAAGGGTGTGTGGA+TGG | + | chr1.1:70390524-70390543 | MS.gene88880:intron | 40.0% |
| AAGTGGTGGTTCCATGAATC+CGG | + | chr1.1:70392933-70392952 | MS.gene88880:CDS | 45.0% | |
| ACAGATTGGAGCAGAGTTTG+TGG | + | chr1.1:70391880-70391899 | MS.gene88880:intron | 45.0% | |
| AGAGACTTGTGCTGCAATGT+AGG | - | chr1.1:70392119-70392138 | None:intergenic | 45.0% | |
| AGAGTTTAAGAGAGGATGGG+AGG | + | chr1.1:70390547-70390566 | MS.gene88880:intron | 45.0% | |
| AGATGAGAATAATGGCCCTC+CGG | - | chr1.1:70388218-70388237 | None:intergenic | 45.0% | |
| AGTTTAAGAGAGGATGGGAG+GGG | + | chr1.1:70390549-70390568 | MS.gene88880:intron | 45.0% | |
| ATGAATTGAACGTACCGCAC+GGG | - | chr1.1:70392299-70392318 | None:intergenic | 45.0% | |
| CAGATTGGAGCAGAGTTTGT+GGG | + | chr1.1:70391881-70391900 | MS.gene88880:intron | 45.0% | |
| CTTGTCCAACGCTAACAGTA+GGG | - | chr1.1:70392210-70392229 | None:intergenic | 45.0% | |
| GAATTGGCTGGTATTGCTGT+TGG | + | chr1.1:70392517-70392536 | MS.gene88880:CDS | 45.0% | |
| GACAGCCAAAATTTCAGGGA+CGG | + | chr1.1:70390470-70390489 | MS.gene88880:intron | 45.0% | |
| GAGTTTAAGAGAGGATGGGA+GGG | + | chr1.1:70390548-70390567 | MS.gene88880:intron | 45.0% | |
| GAGTTTAGGAGGGAAAAGGA+AGG | - | chr1.1:70390738-70390757 | None:intergenic | 45.0% | |
| GTAAATGCTAGGCCAACAAG+TGG | + | chr1.1:70392916-70392935 | MS.gene88880:intron | 45.0% | |
| GTGGATGGAGAGTTTAAGAG+AGG | + | chr1.1:70390539-70390558 | MS.gene88880:intron | 45.0% | |
| GTTTACCATCCTTTCCTCTC+TGG | + | chr1.1:70392172-70392191 | MS.gene88880:CDS | 45.0% | |
| GTTTAGGAGGGAAAAGGAAG+GGG | - | chr1.1:70390736-70390755 | None:intergenic | 45.0% | |
| TACTTAACTCGTACTCCCTC+CGG | + | chr1.1:70390150-70390169 | MS.gene88880:intron | 45.0% | |
| TGCATCGCTAATTTCTCTGC+TGG | + | chr1.1:70388322-70388341 | MS.gene88880:CDS | 45.0% | |
| TGGCTGTCATATACTTCCTC+CGG | - | chr1.1:70390458-70390477 | None:intergenic | 45.0% | |
| TTCATGGAACCACCACTTGT+TGG | - | chr1.1:70392931-70392950 | None:intergenic | 45.0% | |
| ! | CATGTCCGTCCCTGAAATTT+TGG | - | chr1.1:70390478-70390497 | None:intergenic | 45.0% |
| !! | TGCAATGCAGGTTGGTGAAT+TGG | + | chr1.1:70392501-70392520 | MS.gene88880:intron | 45.0% |
| !! | TGGAATTAATTTGTGGGCGG+TGG | - | chr1.1:70388456-70388475 | None:intergenic | 45.0% |
| !! | AAAATTAAAAAAAAAAAGTT+AGG | + | chr1.1:70391075-70391094 | MS.gene88880:intron | 5.0% |
| !!! | TTTATTTTACATTTATTTTT+AGG | - | chr1.1:70391228-70391247 | None:intergenic | 5.0% |
| AATGCTAGGCCAACAAGTGG+TGG | + | chr1.1:70392919-70392938 | MS.gene88880:intron | 50.0% | |
| ACTGTCCCTACTGTTAGCGT+TGG | + | chr1.1:70392202-70392221 | MS.gene88880:CDS | 50.0% | |
| ACTTGTGCTGCAATGTAGGC+TGG | - | chr1.1:70392115-70392134 | None:intergenic | 50.0% | |
| AGGTGCAACATGTGTATGCC+GGG | + | chr1.1:70388283-70388302 | MS.gene88880:CDS | 50.0% | |
| ATCACTCACCATTGCCTTCG+CGG | + | chr1.1:70392060-70392079 | MS.gene88880:CDS | 50.0% | |
| ATGGGAAATGCAGCTTGTGC+TGG | + | chr1.1:70391977-70391996 | MS.gene88880:CDS | 50.0% | |
| GAGGTGCAACATGTGTATGC+CGG | + | chr1.1:70388282-70388301 | MS.gene88880:CDS | 50.0% | |
| GATGAGAATAATGGCCCTCC+GGG | - | chr1.1:70388217-70388236 | None:intergenic | 50.0% | |
| GCTTGTCCAACGCTAACAGT+AGG | - | chr1.1:70392211-70392230 | None:intergenic | 50.0% | |
| GTGAGTCATTTGCAATGGGG+AGG | + | chr1.1:70388263-70388282 | MS.gene88880:CDS | 50.0% | |
| TAATTTCCTGCTGCAACGGC+TGG | - | chr1.1:70392973-70392992 | None:intergenic | 50.0% | |
| TACCATCCTTTCCTCTCTGG+TGG | + | chr1.1:70392175-70392194 | MS.gene88880:CDS | 50.0% | |
| TAGCGATGGAAGCTCCTAAC+CGG | - | chr1.1:70393102-70393121 | None:intergenic | 50.0% | |
| !! | ATGCAGGTTGGTGAATTGGC+TGG | + | chr1.1:70392505-70392524 | MS.gene88880:intron | 50.0% |
| !! | TGTTGCTACTGATTCCCGTG+CGG | + | chr1.1:70392282-70392301 | MS.gene88880:CDS | 50.0% |
| AAGCTCCTAACCGGTTGAGG+TGG | - | chr1.1:70393093-70393112 | None:intergenic | 55.0% | |
| ATGAATCCGGTGCGCACCTT+AGG | + | chr1.1:70392946-70392965 | MS.gene88880:CDS | 55.0% | |
| CACCACCAGAGAGGAAAGGA+TGG | - | chr1.1:70392180-70392199 | None:intergenic | 55.0% | |
| CTGAACCACCTCAACCGGTT+AGG | + | chr1.1:70393085-70393104 | MS.gene88880:CDS | 55.0% | |
| GAACATGTGCCCACGGGAAA+TGG | - | chr1.1:70392093-70392112 | None:intergenic | 55.0% | |
| GCGAAGGCAATGGTGAGTGA+TGG | - | chr1.1:70392061-70392080 | None:intergenic | 55.0% | |
| GTGACACCACCAGAGAGGAA+AGG | - | chr1.1:70392184-70392203 | None:intergenic | 55.0% | |
| TAAGGTGCGCACCGGATTCA+TGG | - | chr1.1:70392947-70392966 | None:intergenic | 55.0% | |
| TAGGCTGGAACATGTGCCCA+CGG | - | chr1.1:70392100-70392119 | None:intergenic | 55.0% | |
| TGGAAGCTCCTAACCGGTTG+AGG | - | chr1.1:70393096-70393115 | None:intergenic | 55.0% | |
| !! | CTTGGTGCTCTAGCTGGTTC+TGG | + | chr1.1:70393027-70393046 | MS.gene88880:CDS | 55.0% |
| !! | TATTTGGTGGCACCGACGCT+TGG | + | chr1.1:70393009-70393028 | MS.gene88880:CDS | 55.0% |
| AGGCTGGAACATGTGCCCAC+GGG | - | chr1.1:70392099-70392118 | None:intergenic | 60.0% | |
| ATCGGAGTCAGGGACACCGA+CGG | + | chr1.1:70388162-70388181 | MS.gene88880:CDS | 60.0% | |
| CGGAGCTGAACCACCTCAAC+CGG | + | chr1.1:70393080-70393099 | MS.gene88880:CDS | 60.0% | |
| GAAATGGCGAAACGCCGCGA+AGG | - | chr1.1:70392077-70392096 | None:intergenic | 60.0% | |
| GGACAGTGACACCACCAGAG+AGG | - | chr1.1:70392189-70392208 | None:intergenic | 60.0% | |
| GGCGTTTCGCCATTTCCCGT+GGG | + | chr1.1:70392081-70392100 | MS.gene88880:CDS | 60.0% | |
| GGTGTCCCTGACTCCGATTC+TGG | - | chr1.1:70388160-70388179 | None:intergenic | 60.0% | |
| TGCTGCAACGGCTGGACCTA+AGG | - | chr1.1:70392965-70392984 | None:intergenic | 60.0% | |
| TTAGGTCCAGCCGTTGCAGC+AGG | + | chr1.1:70392964-70392983 | MS.gene88880:CDS | 60.0% | |
| ! | CCAGCTAGAGCACCAAGCGT+CGG | - | chr1.1:70393024-70393043 | None:intergenic | 60.0% |
| !! | AATGGCCCTCCGGGAGTATC+CGG | - | chr1.1:70388208-70388227 | None:intergenic | 60.0% |
| CGACACCGGATACTCCCGGA+GGG | + | chr1.1:70388200-70388219 | MS.gene88880:CDS | 65.0% | |
| CGGCGTTTCGCCATTTCCCG+TGG | + | chr1.1:70392080-70392099 | MS.gene88880:CDS | 65.0% | |
| GCGAAACGCCGCGAAGGCAA+TGG | - | chr1.1:70392071-70392090 | None:intergenic | 65.0% | |
| GCTGGACCTAAGGTGCGCAC+CGG | - | chr1.1:70392955-70392974 | None:intergenic | 65.0% | |
| !! | CCGACGCTTGGTGCTCTAGC+TGG | + | chr1.1:70393021-70393040 | MS.gene88880:CDS | 65.0% |
| AGGGACACCGACGGCAGCGT+CGG | + | chr1.1:70388171-70388190 | MS.gene88880:CDS | 70.0% | |
| CCGGCGACACCGGATACTCC+CGG | + | chr1.1:70388196-70388215 | MS.gene88880:CDS | 70.0% | |
| GCGACACCGGATACTCCCGG+AGG | + | chr1.1:70388199-70388218 | MS.gene88880:CDS | 70.0% | |
| !! | CCGGGAGTATCCGGTGTCGC+CGG | - | chr1.1:70388199-70388218 | None:intergenic | 70.0% |
| !! | ACCGACGGCAGCGTCGGTGC+CGG | + | chr1.1:70388177-70388196 | MS.gene88880:CDS | 75.0% |
| !! | AGCGTCGGTGCCGGCGACAC+CGG | + | chr1.1:70388186-70388205 | MS.gene88880:CDS | 75.0% |
| !!! | GCCGGCACCGACGCTGCCGT+CGG | - | chr1.1:70388181-70388200 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 70388154 | 70393122 | 70388154 | ID=MS.gene88880 |
| chr1.1 | mRNA | 70388154 | 70393122 | 70388154 | ID=MS.gene88880.t1;Parent=MS.gene88880 |
| chr1.1 | exon | 70388154 | 70388378 | 70388154 | ID=MS.gene88880.t1.exon1;Parent=MS.gene88880.t1 |
| chr1.1 | CDS | 70388154 | 70388378 | 70388154 | ID=cds.MS.gene88880.t1;Parent=MS.gene88880.t1 |
| chr1.1 | exon | 70391884 | 70392303 | 70391884 | ID=MS.gene88880.t1.exon2;Parent=MS.gene88880.t1 |
| chr1.1 | CDS | 70391884 | 70392303 | 70391884 | ID=cds.MS.gene88880.t1;Parent=MS.gene88880.t1 |
| chr1.1 | exon | 70392511 | 70392572 | 70392511 | ID=MS.gene88880.t1.exon3;Parent=MS.gene88880.t1 |
| chr1.1 | CDS | 70392511 | 70392572 | 70392511 | ID=cds.MS.gene88880.t1;Parent=MS.gene88880.t1 |
| chr1.1 | exon | 70392927 | 70393122 | 70392927 | ID=MS.gene88880.t1.exon4;Parent=MS.gene88880.t1 |
| chr1.1 | CDS | 70392927 | 70393122 | 70392927 | ID=cds.MS.gene88880.t1;Parent=MS.gene88880.t1 |
| Gene Sequence |
| Protein sequence |
