Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81370.t1 | AET00701.1 | 45.6 | 562 | 190 | 12 | 1 | 494 | 1 | 514 | 3.40E-43 | 186.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81370.t1 | G7K4I5 | 45.6 | 562 | 190 | 12 | 1 | 494 | 1 | 514 | 2.4e-43 | 186.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene81370 | 0.840492 | 8.42E-58 | -1.69E-46 |
| MS.gene049159 | MS.gene81370 | 0.841588 | 4.34E-58 | -1.69E-46 |
| MS.gene049254 | MS.gene81370 | 0.802333 | 5.90E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene81370 | 0.829046 | 6.41E-55 | -1.69E-46 |
| MS.gene049501 | MS.gene81370 | 0.840558 | 8.09E-58 | -1.69E-46 |
| MS.gene049585 | MS.gene81370 | 0.808421 | 3.12E-50 | -1.69E-46 |
| MS.gene049647 | MS.gene81370 | 0.821317 | 4.31E-53 | -1.69E-46 |
| MS.gene049821 | MS.gene81370 | 0.808578 | 2.89E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene81370 | 0.856478 | 3.13E-62 | -1.69E-46 |
| MS.gene050137 | MS.gene81370 | 0.802331 | 5.90E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene81370 | 0.829394 | 5.28E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene81370 | 0.805035 | 1.62E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene81370 | 0.804975 | 1.67E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene81370 | 0.839457 | 1.57E-57 | -1.69E-46 |
| MS.gene050657 | MS.gene81370 | 0.805082 | 1.58E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene81370 | 0.836668 | 8.18E-57 | -1.69E-46 |
| MS.gene050721 | MS.gene81370 | 0.834586 | 2.75E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene81370 | 0.834741 | 2.52E-56 | -1.69E-46 |
| MS.gene050780 | MS.gene81370 | 0.800701 | 1.27E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene81370 | 0.831329 | 1.78E-55 | -1.69E-46 |
| MS.gene050808 | MS.gene81370 | 0.807765 | 4.31E-50 | -1.69E-46 |
| MS.gene050815 | MS.gene81370 | 0.801223 | 9.97E-49 | -1.69E-46 |
| MS.gene050826 | MS.gene81370 | 0.807089 | 5.99E-50 | -1.69E-46 |
| MS.gene050844 | MS.gene81370 | 0.830925 | 2.23E-55 | -1.69E-46 |
| MS.gene050959 | MS.gene81370 | 0.824922 | 6.21E-54 | -1.69E-46 |
| MS.gene051147 | MS.gene81370 | 0.804154 | 2.48E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene81370 | 0.817858 | 2.65E-52 | -1.69E-46 |
| MS.gene051210 | MS.gene81370 | 0.831036 | 2.10E-55 | -1.69E-46 |
| MS.gene051247 | MS.gene81370 | 0.859988 | 2.83E-63 | -1.69E-46 |
| MS.gene051265 | MS.gene81370 | 0.833362 | 5.57E-56 | -1.69E-46 |
| MS.gene051388 | MS.gene81370 | 0.831143 | 1.97E-55 | -1.69E-46 |
| MS.gene051490 | MS.gene81370 | 0.81106 | 8.46E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene81370 | 0.802524 | 5.38E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene81370 | 0.803806 | 2.92E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene81370 | 0.832235 | 1.06E-55 | -1.69E-46 |
| MS.gene051705 | MS.gene81370 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene81370 | 0.835578 | 1.55E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene81370 | 0.851143 | 1.07E-60 | -1.69E-46 |
| MS.gene051744 | MS.gene81370 | 0.820759 | 5.79E-53 | -1.69E-46 |
| MS.gene051800 | MS.gene81370 | 0.821054 | 4.95E-53 | -1.69E-46 |
| MS.gene051933 | MS.gene81370 | 0.807728 | 4.39E-50 | -1.69E-46 |
| MS.gene052012 | MS.gene81370 | 0.807094 | 5.98E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene81370 | 0.835553 | 1.57E-56 | -1.69E-46 |
| MS.gene052042 | MS.gene81370 | 0.824661 | 7.15E-54 | -1.69E-46 |
| MS.gene052323 | MS.gene81370 | 0.827983 | 1.16E-54 | -1.69E-46 |
| MS.gene052384 | MS.gene81370 | 0.81332 | 2.72E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene81370 | 0.834015 | 3.83E-56 | -1.69E-46 |
| MS.gene052519 | MS.gene81370 | 0.825196 | 5.35E-54 | -1.69E-46 |
| MS.gene052561 | MS.gene81370 | 0.806184 | 9.31E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene81370 | 0.805249 | 1.46E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene81370 | 0.822684 | 2.08E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene81370 | 0.814639 | 1.39E-51 | -1.69E-46 |
| MS.gene052673 | MS.gene81370 | -0.820643 | 6.16E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene81370 | 0.820355 | 7.17E-53 | -1.69E-46 |
| MS.gene052863 | MS.gene81370 | 0.844505 | 7.25E-59 | -1.69E-46 |
| MS.gene052896 | MS.gene81370 | 0.86842 | 6.62E-66 | -1.69E-46 |
| MS.gene053008 | MS.gene81370 | 0.826085 | 3.29E-54 | -1.69E-46 |
| MS.gene053054 | MS.gene81370 | -0.809279 | 2.05E-50 | -1.69E-46 |
| MS.gene053147 | MS.gene81370 | 0.802028 | 6.81E-49 | -1.69E-46 |
| MS.gene053164 | MS.gene81370 | 0.823659 | 1.23E-53 | -1.69E-46 |
| MS.gene053221 | MS.gene81370 | 0.836099 | 1.14E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene81370 | 0.841093 | 5.86E-58 | -1.69E-46 |
| MS.gene053331 | MS.gene81370 | 0.800153 | 1.65E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene81370 | 0.801601 | 8.34E-49 | -1.69E-46 |
| MS.gene054139 | MS.gene81370 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene81370 | 0.8286 | 8.22E-55 | -1.69E-46 |
| MS.gene05415 | MS.gene81370 | 0.823088 | 1.67E-53 | -1.69E-46 |
| MS.gene054236 | MS.gene81370 | 0.812078 | 5.08E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene81370 | 0.816288 | 5.97E-52 | -1.69E-46 |
| MS.gene054291 | MS.gene81370 | -0.828207 | 1.02E-54 | -1.69E-46 |
| MS.gene054467 | MS.gene81370 | 0.848796 | 4.88E-60 | -1.69E-46 |
| MS.gene054468 | MS.gene81370 | 0.822209 | 2.68E-53 | -1.69E-46 |
| MS.gene054472 | MS.gene81370 | 0.83057 | 2.73E-55 | -1.69E-46 |
| MS.gene05458 | MS.gene81370 | 0.814207 | 1.73E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene81370 | 0.819761 | 9.80E-53 | -1.69E-46 |
| MS.gene05468 | MS.gene81370 | 0.846033 | 2.80E-59 | -1.69E-46 |
| MS.gene054775 | MS.gene81370 | 0.853634 | 2.10E-61 | -1.69E-46 |
| MS.gene054801 | MS.gene81370 | 0.80405 | 2.60E-49 | -1.69E-46 |
| MS.gene054875 | MS.gene81370 | 0.811361 | 7.28E-51 | -1.69E-46 |
| MS.gene054991 | MS.gene81370 | 0.818395 | 2.00E-52 | -1.69E-46 |
| MS.gene055227 | MS.gene81370 | 0.821813 | 3.31E-53 | -1.69E-46 |
| MS.gene055228 | MS.gene81370 | 0.804998 | 1.65E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene81370 | 0.809866 | 1.53E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene81370 | 0.813704 | 2.24E-51 | -1.69E-46 |
| MS.gene055357 | MS.gene81370 | 0.811737 | 6.03E-51 | -1.69E-46 |
| MS.gene055363 | MS.gene81370 | 0.828885 | 7.01E-55 | -1.69E-46 |
| MS.gene055465 | MS.gene81370 | 0.844504 | 7.25E-59 | -1.69E-46 |
| MS.gene055466 | MS.gene81370 | 0.850313 | 1.84E-60 | -1.69E-46 |
| MS.gene055468 | MS.gene81370 | 0.830988 | 2.15E-55 | -1.69E-46 |
| MS.gene055469 | MS.gene81370 | 0.810601 | 1.06E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene81370 | 0.81125 | 7.69E-51 | -1.69E-46 |
| MS.gene055608 | MS.gene81370 | 0.827026 | 1.96E-54 | -1.69E-46 |
| MS.gene055778 | MS.gene81370 | 0.836414 | 9.49E-57 | -1.69E-46 |
| MS.gene055818 | MS.gene81370 | 0.859392 | 4.27E-63 | -1.69E-46 |
| MS.gene055926 | MS.gene81370 | 0.852069 | 5.88E-61 | -1.69E-46 |
| MS.gene05604 | MS.gene81370 | 0.841529 | 4.50E-58 | -1.69E-46 |
| MS.gene056050 | MS.gene81370 | 0.81327 | 2.79E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene81370 | 0.844606 | 6.81E-59 | -1.69E-46 |
| MS.gene056174 | MS.gene81370 | 0.827318 | 1.67E-54 | -1.69E-46 |
| MS.gene056308 | MS.gene81370 | 0.832028 | 1.19E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene81370 | 0.801946 | 7.08E-49 | -1.69E-46 |
| MS.gene056373 | MS.gene81370 | 0.81494 | 1.19E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene81370 | 0.802125 | 6.51E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene81370 | 0.826229 | 3.04E-54 | -1.69E-46 |
| MS.gene056595 | MS.gene81370 | 0.800356 | 1.50E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene81370 | 0.830874 | 2.30E-55 | -1.69E-46 |
| MS.gene057028 | MS.gene81370 | 0.816651 | 4.96E-52 | -1.69E-46 |
| MS.gene057060 | MS.gene81370 | 0.806323 | 8.70E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene81370 | 0.816907 | 4.34E-52 | -1.69E-46 |
| MS.gene057360 | MS.gene81370 | 0.803901 | 2.79E-49 | -1.69E-46 |
| MS.gene057414 | MS.gene81370 | 0.800357 | 1.50E-48 | -1.69E-46 |
| MS.gene057444 | MS.gene81370 | 0.831108 | 2.01E-55 | -1.69E-46 |
| MS.gene057446 | MS.gene81370 | 0.813797 | 2.13E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene81370 | 0.801944 | 7.09E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene81370 | 0.814873 | 1.23E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene81370 | 0.876476 | 1.35E-68 | -1.69E-46 |
| MS.gene058037 | MS.gene81370 | 0.811123 | 8.19E-51 | -1.69E-46 |
| MS.gene058168 | MS.gene81370 | 0.80818 | 3.51E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene81370 | 0.805207 | 1.49E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene81370 | 0.847761 | 9.43E-60 | -1.69E-46 |
| MS.gene058636 | MS.gene81370 | 0.832277 | 1.04E-55 | -1.69E-46 |
| MS.gene058647 | MS.gene81370 | 0.802579 | 5.25E-49 | -1.69E-46 |
| MS.gene058829 | MS.gene81370 | 0.819638 | 1.05E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene81370 | 0.822483 | 2.31E-53 | -1.69E-46 |
| MS.gene05897 | MS.gene81370 | 0.809453 | 1.88E-50 | -1.69E-46 |
| MS.gene059272 | MS.gene81370 | 0.814796 | 1.28E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene81370 | 0.805872 | 1.08E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene81370 | 0.827182 | 1.80E-54 | -1.69E-46 |
| MS.gene059570 | MS.gene81370 | 0.81895 | 1.50E-52 | -1.69E-46 |
| MS.gene059625 | MS.gene81370 | 0.820225 | 7.68E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene81370 | 0.802491 | 5.47E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene81370 | 0.853518 | 2.27E-61 | -1.69E-46 |
| MS.gene059789 | MS.gene81370 | 0.821523 | 3.86E-53 | -1.69E-46 |
| MS.gene059842 | MS.gene81370 | 0.837702 | 4.45E-57 | -1.69E-46 |
| MS.gene059937 | MS.gene81370 | 0.812918 | 3.33E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene81370 | -0.837172 | 6.08E-57 | -1.69E-46 |
| MS.gene060167 | MS.gene81370 | 0.814252 | 1.69E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene81370 | 0.822658 | 2.11E-53 | -1.69E-46 |
| MS.gene06052 | MS.gene81370 | 0.832756 | 7.88E-56 | -1.69E-46 |
| MS.gene060572 | MS.gene81370 | 0.805076 | 1.59E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene81370 | 0.812958 | 3.26E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene81370 | 0.836232 | 1.06E-56 | -1.69E-46 |
| MS.gene060683 | MS.gene81370 | 0.824723 | 6.92E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene81370 | 0.827807 | 1.28E-54 | -1.69E-46 |
| MS.gene060802 | MS.gene81370 | 0.812569 | 3.97E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene81370 | 0.847776 | 9.34E-60 | -1.69E-46 |
| MS.gene060998 | MS.gene81370 | 0.835743 | 1.40E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81370.t1 | MTR_5g094950 | 58.730 | 441 | 126 | 9 | 1 | 429 | 1 | 397 | 1.12e-133 | 399 |
| MS.gene81370.t1 | MTR_5g094970 | 59.816 | 326 | 94 | 6 | 78 | 396 | 10 | 305 | 1.63e-105 | 320 |
| MS.gene81370.t1 | MTR_5g095050 | 48.182 | 440 | 143 | 10 | 1 | 398 | 1 | 397 | 1.52e-100 | 314 |
| MS.gene81370.t1 | MTR_5g094960 | 37.500 | 536 | 193 | 15 | 1 | 498 | 1 | 432 | 9.48e-80 | 258 |
| MS.gene81370.t1 | MTR_5g094920 | 37.162 | 592 | 256 | 17 | 1 | 531 | 1 | 537 | 7.71e-76 | 249 |
| MS.gene81370.t1 | MTR_5g094910 | 41.226 | 359 | 157 | 13 | 149 | 495 | 30 | 346 | 1.36e-58 | 199 |
| MS.gene81370.t1 | MTR_5g094850 | 33.451 | 565 | 189 | 16 | 3 | 496 | 1 | 449 | 3.98e-58 | 201 |
| MS.gene81370.t1 | MTR_5g094850 | 32.143 | 588 | 189 | 16 | 3 | 496 | 1 | 472 | 3.85e-54 | 191 |
| MS.gene81370.t1 | MTR_5g094990 | 43.042 | 309 | 128 | 7 | 236 | 498 | 127 | 433 | 6.97e-51 | 181 |
| MS.gene81370.t1 | MTR_5g077500 | 53.052 | 213 | 63 | 3 | 186 | 398 | 74 | 249 | 4.13e-41 | 149 |
| MS.gene81370.t1 | MTR_5g095390 | 39.370 | 254 | 111 | 8 | 258 | 495 | 119 | 345 | 1.91e-23 | 102 |
| MS.gene81370.t1 | MTR_5g095390 | 32.456 | 228 | 111 | 7 | 3 | 209 | 1 | 206 | 1.98e-16 | 81.6 |
| MS.gene81370.t1 | MTR_5g095370 | 33.908 | 174 | 86 | 4 | 1 | 171 | 1 | 148 | 1.28e-16 | 79.7 |
| MS.gene81370.t1 | MTR_1g071620 | 44.715 | 123 | 55 | 2 | 267 | 389 | 65 | 174 | 2.22e-15 | 75.9 |
| MS.gene81370.t1 | MTR_5g095400 | 38.346 | 133 | 69 | 4 | 41 | 167 | 6 | 131 | 2.85e-11 | 66.2 |
| MS.gene81370.t1 | MTR_5g095430 | 37.984 | 129 | 67 | 4 | 45 | 167 | 1 | 122 | 5.71e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 95 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGAAAAGAATGTCATTTC+TGG | 0.196713 | 5.2:-80047279 | MS.gene81370:CDS |
| TAACAAGTTGAAGGATAAAA+TGG | 0.296417 | 5.2:-80049792 | MS.gene81370:CDS |
| TAGCAAAATGAATGAGGATT+TGG | 0.304422 | 5.2:-80049825 | MS.gene81370:CDS |
| GGAAACAGTGAACACAAATT+TGG | 0.305436 | 5.2:-80049354 | MS.gene81370:CDS |
| GTCAGCAACATTTGCAAACT+TGG | 0.306954 | 5.2:+80047197 | None:intergenic |
| GAGATCAAATTTGTCAGAAA+TGG | 0.314011 | 5.2:-80050024 | MS.gene81370:CDS |
| TTGATGAGTTTCTTGCAATT+TGG | 0.348899 | 5.2:+80050000 | None:intergenic |
| TGAGAAATTGAAGGAGAAAA+TGG | 0.358585 | 5.2:-80049573 | MS.gene81370:CDS |
| TTTCCATACCGTGAAATTGA+TGG | 0.362457 | 5.2:+80049069 | None:intergenic |
| AATGCATTTGATGTGCTAAA+AGG | 0.364291 | 5.2:-80049539 | MS.gene81370:CDS |
| TCGAAACAAGGTTGGTGTAT+TGG | 0.381680 | 5.2:-80049429 | MS.gene81370:CDS |
| TGATAAGGTTGAAGGTGTTT+TGG | 0.381818 | 5.2:-80050149 | MS.gene81370:CDS |
| TGAGCTAGAATCTAAAGTTT+TGG | 0.385801 | 5.2:-80049507 | MS.gene81370:CDS |
| AGCAGATCCGGTGGTGGTGG+AGG | 0.421551 | 5.2:-80050266 | MS.gene81370:CDS |
| AGATCCGGTGGTGGTGGAGG+AGG | 0.422313 | 5.2:-80050263 | MS.gene81370:CDS |
| TCAAGAGTTGGAGAAGTTGA+AGG | 0.432096 | 5.2:-80049750 | MS.gene81370:CDS |
| TTTGGAGTTGGAAAAGTTGA+AGG | 0.432548 | 5.2:-80049489 | MS.gene81370:CDS |
| TTCAAAATGAGAAAATTTCA+AGG | 0.437344 | 5.2:-80050075 | MS.gene81370:CDS |
| GTGTCGGTGGAAGGTGAGTT+AGG | 0.444103 | 5.2:+80050316 | None:intergenic |
| AATAGAGGTTTCACTGTTGT+CGG | 0.446667 | 5.2:+80047149 | None:intergenic |
| TCCGGTGGTGGTGGAGGAGG+AGG | 0.449005 | 5.2:-80050260 | MS.gene81370:CDS |
| ATAGAGGTTTCACTGTTGTC+GGG | 0.452113 | 5.2:+80047150 | None:intergenic |
| AACAGAGGAACTAGAAATAG+AGG | 0.480923 | 5.2:+80047134 | None:intergenic |
| CAAAATGAATGAGGATTTGG+AGG | 0.483467 | 5.2:-80049822 | MS.gene81370:CDS |
| TGGAAATGTAGTTCAAGAGT+TGG | 0.485439 | 5.2:-80049762 | MS.gene81370:CDS |
| GAACGAAAACAGAAAATTAG+TGG | 0.485865 | 5.2:-80049312 | MS.gene81370:CDS |
| TGAAGTGCTATTGATGAACT+TGG | 0.486913 | 5.2:+80047228 | None:intergenic |
| TCCTCCTCCTCCACCACCAC+CGG | 0.487853 | 5.2:+80050259 | None:intergenic |
| GGAGGATGAAAAGAATGCTT+TGG | 0.493328 | 5.2:-80049408 | MS.gene81370:CDS |
| AAGGAGAAAATGGTGGAAGA+TGG | 0.497085 | 5.2:-80049563 | MS.gene81370:CDS |
| GATGTTGGTGGCAATGAGGT+TGG | 0.498941 | 5.2:-80049140 | MS.gene81370:CDS |
| TGGAGCAGATCCGGTGGTGG+TGG | 0.500632 | 5.2:-80050269 | MS.gene81370:CDS |
| GAAGATGGCCATCAATTTCA+CGG | 0.502087 | 5.2:-80049077 | MS.gene81370:intron |
| CCATCTTCATTTCTTTGCAA+AGG | 0.504483 | 5.2:+80049092 | None:intergenic |
| GATGAAAAGAATGCTTTGGC+TGG | 0.508133 | 5.2:-80049404 | MS.gene81370:CDS |
| AAGGATAAAATGGTGGAAGA+TGG | 0.511454 | 5.2:-80049782 | MS.gene81370:CDS |
| TATGGTGGTGGAAGCAATGA+GGG | 0.513770 | 5.2:-80049173 | MS.gene81370:CDS |
| GCTATTGATGAACTTGGAGT+TGG | 0.518099 | 5.2:+80047234 | None:intergenic |
| TGGAAAAGTTGAAGGAAAAG+TGG | 0.518880 | 5.2:-80049481 | MS.gene81370:CDS |
| ACACGAGAACAAGTAGAGGC+TGG | 0.519826 | 5.2:-80049866 | MS.gene81370:CDS |
| AAAGAATGCAGAGTTAGAGC+AGG | 0.521553 | 5.2:-80049684 | MS.gene81370:CDS |
| TGATGATGTTGGAGCAGATC+CGG | 0.522711 | 5.2:-80050278 | MS.gene81370:CDS |
| GAATGCAGAGTTAGAGCAGG+AGG | 0.527723 | 5.2:-80049681 | MS.gene81370:CDS |
| AGATGAAAGAGTTGCTAGGT+TGG | 0.530629 | 5.2:-80049231 | MS.gene81370:CDS |
| AAACAAGGTTGGTGTATTGG+AGG | 0.530901 | 5.2:-80049426 | MS.gene81370:CDS |
| ACTCTTCTTCATGACTTACA+AGG | 0.531370 | 5.2:-80050232 | MS.gene81370:CDS |
| GAAATCTATGATAAGGTTGA+AGG | 0.531423 | 5.2:-80050157 | MS.gene81370:CDS |
| AGTGCTTAGCAAAATGAATG+AGG | 0.532316 | 5.2:-80049831 | MS.gene81370:CDS |
| AAACACGTTGAACAAGATCA+TGG | 0.537446 | 5.2:+80050200 | None:intergenic |
| GGGTGAGATTAACAAGTTGA+AGG | 0.537450 | 5.2:-80049801 | MS.gene81370:CDS |
| GTTCTTGATGCTGATGATGT+TGG | 0.538791 | 5.2:-80050289 | MS.gene81370:CDS |
| TCTCCATGACCTTCGAAACA+AGG | 0.541730 | 5.2:-80049441 | MS.gene81370:CDS |
| AATTTCAAGGTTACATGTAG+AGG | 0.548212 | 5.2:-80050062 | MS.gene81370:CDS |
| CAACCTTGTTTCGAAGGTCA+TGG | 0.548900 | 5.2:+80049438 | None:intergenic |
| CTCATTGCTTCCACCACCAT+AGG | 0.549111 | 5.2:+80049175 | None:intergenic |
| TGGAAGTTTGAATATGCAAA+AGG | 0.553990 | 5.2:-80047355 | MS.gene81370:CDS |
| ATTAGTGGATGAGAAACGTA+AGG | 0.555462 | 5.2:-80049297 | MS.gene81370:CDS |
| AGTGTAGATGCCTATGGTGG+TGG | 0.558181 | 5.2:-80049185 | MS.gene81370:CDS |
| GGGGATGGAGAGGATGTTGG+TGG | 0.560054 | 5.2:-80049152 | MS.gene81370:CDS |
| CATTAGATGAAAGAGTTGCT+AGG | 0.560226 | 5.2:-80049235 | MS.gene81370:CDS |
| GAGTGATGAGTTGGAGTGTG+AGG | 0.568828 | 5.2:-80049597 | MS.gene81370:CDS |
| CACGAGAACAAGTAGAGGCT+GGG | 0.571363 | 5.2:-80049865 | MS.gene81370:CDS |
| ATACACCAACCTTGTTTCGA+AGG | 0.571683 | 5.2:+80049432 | None:intergenic |
| TCTGTGAGTGTAGATGCCTA+TGG | 0.575324 | 5.2:-80049191 | MS.gene81370:CDS |
| TCGTGCTGAAATCTATGATA+AGG | 0.576606 | 5.2:-80050164 | MS.gene81370:CDS |
| CAAGTTGAAGGATAAAATGG+TGG | 0.577376 | 5.2:-80049789 | MS.gene81370:CDS |
| TGAAAGAGTTGCTAGGTTGG+AGG | 0.583041 | 5.2:-80049228 | MS.gene81370:CDS |
| GATGATCTGTGTATGTCTCA+AGG | 0.597133 | 5.2:-80047300 | MS.gene81370:CDS |
| AGGCATCTACACTCACAGAA+AGG | 0.597249 | 5.2:+80049195 | None:intergenic |
| GAAATTGAAGGAGAAAATGG+TGG | 0.597675 | 5.2:-80049570 | MS.gene81370:CDS |
| CATAAATCTTGACGACGAAG+AGG | 0.599174 | 5.2:-80047322 | MS.gene81370:CDS |
| GTGTGAGGTTGAGAAATTGA+AGG | 0.601115 | 5.2:-80049582 | MS.gene81370:CDS |
| AGAACTATAGTGTCGGTGGA+AGG | 0.614210 | 5.2:+80050307 | None:intergenic |
| CATTTCTGGAATTTGCGTGA+AGG | 0.617154 | 5.2:-80047265 | MS.gene81370:CDS |
| CATGACCTTCGAAACAAGGT+TGG | 0.618629 | 5.2:-80049437 | MS.gene81370:CDS |
| AGAACAAGTAGAGGCTGGGA+AGG | 0.618974 | 5.2:-80049861 | MS.gene81370:CDS |
| TAGAGGTTTCACTGTTGTCG+GGG | 0.619554 | 5.2:+80047151 | None:intergenic |
| TCTTGATACTATAATATCTG+TGG | 0.621035 | 5.2:-80047100 | MS.gene81370:CDS |
| AGATGGAAATGCACTTGATG+TGG | 0.626452 | 5.2:-80049714 | MS.gene81370:CDS |
| AGCATCAAGAACTATAGTGT+CGG | 0.629520 | 5.2:+80050300 | None:intergenic |
| TTAGTGGATGAGAAACGTAA+GGG | 0.632994 | 5.2:-80049296 | MS.gene81370:CDS |
| CCTTTGCAAAGAAATGAAGA+TGG | 0.633874 | 5.2:-80049092 | MS.gene81370:CDS |
| ATGGTGGTGGAAGCAATGAG+GGG | 0.639170 | 5.2:-80049172 | MS.gene81370:CDS |
| CTATGGTGGTGGAAGCAATG+AGG | 0.642450 | 5.2:-80049174 | MS.gene81370:CDS |
| ATCAAGAACTATAGTGTCGG+TGG | 0.642606 | 5.2:+80050303 | None:intergenic |
| TGTTGGAGCAGATCCGGTGG+TGG | 0.643207 | 5.2:-80050272 | MS.gene81370:CDS |
| TGGCAATTATAAGCAAGCTG+AGG | 0.646585 | 5.2:-80049334 | MS.gene81370:CDS |
| AAAATGAATGAGGATTTGGA+GGG | 0.663728 | 5.2:-80049821 | MS.gene81370:CDS |
| GAATGTTAAGTTGATGTGTG+AGG | 0.668750 | 5.2:-80049900 | MS.gene81370:CDS |
| GTGAGTGTAGATGCCTATGG+TGG | 0.673058 | 5.2:-80049188 | MS.gene81370:CDS |
| TGGTGGTGGAAGCAATGAGG+GGG | 0.676872 | 5.2:-80049171 | MS.gene81370:CDS |
| AGAGGATGTTGGTGGCAATG+AGG | 0.682533 | 5.2:-80049144 | MS.gene81370:CDS |
| GCTGACACGAGAACAAGTAG+AGG | 0.695991 | 5.2:-80049870 | MS.gene81370:CDS |
| TGATGTTGGAGCAGATCCGG+TGG | 0.706405 | 5.2:-80050275 | MS.gene81370:CDS |
| AAGATACGATGAATCAACAG+AGG | 0.711060 | 5.2:+80047119 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAACAAGAAAAAACA+CGG | + | chr5.2:80048481-80048500 | None:intergenic | 15.0% |
| !! | TGAAATTATAATAGCTATTT+AGG | - | chr5.2:80049700-80049719 | MS.gene81370:CDS | 15.0% |
| !! | TTCAAAGAATAAACTATAAA+TGG | + | chr5.2:80049420-80049439 | None:intergenic | 15.0% |
| !!! | TTTTTATAAATTCTTTGAAC+TGG | - | chr5.2:80048520-80048539 | MS.gene81370:intron | 15.0% |
| !! | AAATTATGATTACTAGCTAT+AGG | + | chr5.2:80048584-80048603 | None:intergenic | 20.0% |
| !! | ATAATGTAACAAACAAAAGT+AGG | - | chr5.2:80049843-80049862 | MS.gene81370:CDS | 20.0% |
| !! | CAAAAACTTAAAATAAGGAA+TGG | + | chr5.2:80049969-80049988 | None:intergenic | 20.0% |
| !! | CATATCTTATCAATTCATTA+TGG | + | chr5.2:80049000-80049019 | None:intergenic | 20.0% |
| !! | TATAGCTAGTAATCATAATT+TGG | - | chr5.2:80048583-80048602 | MS.gene81370:intron | 20.0% |
| !! | TGAATTGATAAGATATGTAT+TGG | - | chr5.2:80049003-80049022 | MS.gene81370:intron | 20.0% |
| !! | TTCAAAATGAGAAAATTTCA+AGG | - | chr5.2:80047336-80047355 | MS.gene81370:CDS | 20.0% |
| !! | TTGGATTATATCTATACATT+AGG | + | chr5.2:80049482-80049501 | None:intergenic | 20.0% |
| !!! | AAGGAATAGTTTAATTTGAA+TGG | - | chr5.2:80049293-80049312 | MS.gene81370:CDS | 20.0% |
| !!! | TTAATTTGAATGGTTATGTA+GGG | - | chr5.2:80049303-80049322 | MS.gene81370:CDS | 20.0% |
| !!! | TTATAATAGCTATTTAGGTT+AGG | - | chr5.2:80049705-80049724 | MS.gene81370:CDS | 20.0% |
| !!! | TTTAATTTGAATGGTTATGT+AGG | - | chr5.2:80049302-80049321 | MS.gene81370:CDS | 20.0% |
| !!! | TTTGTTACATTATTGTTTTC+TGG | + | chr5.2:80049836-80049855 | None:intergenic | 20.0% |
| ! | ATATAATCCAACACTTGATA+TGG | - | chr5.2:80049491-80049510 | MS.gene81370:CDS | 25.0% |
| ! | TAATTTGAATGGTTATGTAG+GGG | - | chr5.2:80049304-80049323 | MS.gene81370:CDS | 25.0% |
| ! | TATAATCCAACACTTGATAT+GGG | - | chr5.2:80049492-80049511 | MS.gene81370:CDS | 25.0% |
| ! | TATAATTTCATTATGCCTTC+TGG | + | chr5.2:80049690-80049709 | None:intergenic | 25.0% |
| ! | TCAAATTAAACTATTCCTTC+TGG | + | chr5.2:80049292-80049311 | None:intergenic | 25.0% |
| ! | TCGAAAATGCATATCTTTAT+AGG | + | chr5.2:80048388-80048407 | None:intergenic | 25.0% |
| ! | TCGAGCAAAAACTTAAAATA+AGG | + | chr5.2:80049974-80049993 | None:intergenic | 25.0% |
| ! | TCTTGATACTATAATATCTG+TGG | - | chr5.2:80050311-80050330 | MS.gene81370:CDS | 25.0% |
| ! | TGATAACTAGTCATCATATT+TGG | - | chr5.2:80048648-80048667 | MS.gene81370:intron | 25.0% |
| ! | TTAGCTGAATTTGATTCATA+TGG | - | chr5.2:80048897-80048916 | MS.gene81370:intron | 25.0% |
| ! | TTATCAATTCATTATGGTGA+AGG | + | chr5.2:80048994-80049013 | None:intergenic | 25.0% |
| ! | TTGATTCATATGGAAGTTTA+AGG | - | chr5.2:80048907-80048926 | MS.gene81370:intron | 25.0% |
| !! | TAACAAGTTGAAGGATAAAA+TGG | - | chr5.2:80047619-80047638 | MS.gene81370:intron | 25.0% |
| !!! | ATAGGTATTTTAATGTGGTA+TGG | + | chr5.2:80048566-80048585 | None:intergenic | 25.0% |
| !!! | GTTTTATTTAAGCAATGAGT+AGG | - | chr5.2:80048492-80048511 | MS.gene81370:intron | 25.0% |
| !!! | TAGCTATAGGTATTTTAATG+TGG | + | chr5.2:80048571-80048590 | None:intergenic | 25.0% |
| AAAAAACATTGAGGAGAAGT+CGG | - | chr5.2:80048294-80048313 | MS.gene81370:intron | 30.0% | |
| AAAAACAAAGAGTGATGAGT+TGG | - | chr5.2:80047805-80047824 | MS.gene81370:intron | 30.0% | |
| AAAATGAATGAGGATTTGGA+GGG | - | chr5.2:80047590-80047609 | MS.gene81370:intron | 30.0% | |
| AAATGTTTGGTTAGATTGCT+AGG | - | chr5.2:80048440-80048459 | MS.gene81370:intron | 30.0% | |
| AATGCATTTGATGTGCTAAA+AGG | - | chr5.2:80047872-80047891 | MS.gene81370:intron | 30.0% | |
| AATTATCCCATATCAAGTGT+TGG | + | chr5.2:80049501-80049520 | None:intergenic | 30.0% | |
| AATTTCAAGGTTACATGTAG+AGG | - | chr5.2:80047349-80047368 | MS.gene81370:CDS | 30.0% | |
| GAAATCTATGATAAGGTTGA+AGG | - | chr5.2:80047254-80047273 | MS.gene81370:CDS | 30.0% | |
| GAACGAAAACAGAAAATTAG+TGG | - | chr5.2:80048099-80048118 | MS.gene81370:intron | 30.0% | |
| GAGATCAAATTTGTCAGAAA+TGG | - | chr5.2:80047387-80047406 | MS.gene81370:intron | 30.0% | |
| GATTAAAAATGGCGAATTGA+AGG | - | chr5.2:80048036-80048055 | MS.gene81370:intron | 30.0% | |
| GCTGGAATTGAGATTAAAAA+TGG | - | chr5.2:80048025-80048044 | MS.gene81370:intron | 30.0% | |
| TAAATTCTTTGAACTGGTGA+AGG | - | chr5.2:80048526-80048545 | MS.gene81370:intron | 30.0% | |
| TAGCAAAATGAATGAGGATT+TGG | - | chr5.2:80047586-80047605 | MS.gene81370:intron | 30.0% | |
| TCCTAGGTAAACATTATTAC+AGG | - | chr5.2:80049887-80049906 | MS.gene81370:CDS | 30.0% | |
| TCCTGTAATAATGTTTACCT+AGG | + | chr5.2:80049891-80049910 | None:intergenic | 30.0% | |
| TGAGAAATTGAAGGAGAAAA+TGG | - | chr5.2:80047838-80047857 | MS.gene81370:intron | 30.0% | |
| TGGAAGTTTGAATATGCAAA+AGG | - | chr5.2:80050056-80050075 | MS.gene81370:CDS | 30.0% | |
| TGTCCTTAACACTGAAATTT+GGG | + | chr5.2:80049090-80049109 | None:intergenic | 30.0% | |
| TTGATGAGTTTCTTGCAATT+TGG | + | chr5.2:80047414-80047433 | None:intergenic | 30.0% | |
| TTTATTCAGTAGTTTCCAGA+AGG | - | chr5.2:80049672-80049691 | MS.gene81370:CDS | 30.0% | |
| ! | ATATGATGACTAGTTATCAC+TGG | + | chr5.2:80048647-80048666 | None:intergenic | 30.0% |
| ! | CTAGTCATCATATTTGGAAT+TGG | - | chr5.2:80048654-80048673 | MS.gene81370:intron | 30.0% |
| ! | CTCAAACAAATCTTAGTTCT+GGG | - | chr5.2:80048959-80048978 | MS.gene81370:intron | 30.0% |
| ! | CTGAAAATCTGAAATTGATG+AGG | - | chr5.2:80049930-80049949 | MS.gene81370:CDS | 30.0% |
| ! | TATGATGACTAGTTATCACT+GGG | + | chr5.2:80048646-80048665 | None:intergenic | 30.0% |
| ! | TCTGGTAAAGTATTTGGATA+TGG | - | chr5.2:80049347-80049366 | MS.gene81370:CDS | 30.0% |
| ! | TTTCTGCTGATGAAAAGTAT+TGG | - | chr5.2:80049586-80049605 | MS.gene81370:CDS | 30.0% |
| !! | AAACACATTTTGTTTCTCCT+AGG | - | chr5.2:80049871-80049890 | MS.gene81370:CDS | 30.0% |
| !! | AAAGATCTTTTGGAAGCTAA+TGG | - | chr5.2:80047464-80047483 | MS.gene81370:intron | 30.0% |
| !! | TAGCTCTTTTCTATTTCTCT+TGG | - | chr5.2:80049377-80049396 | MS.gene81370:CDS | 30.0% |
| !! | TCAAACAAATCTTAGTTCTG+GGG | - | chr5.2:80048960-80048979 | MS.gene81370:intron | 30.0% |
| !! | TCTTTTGAAAGATTCCAAGA+AGG | - | chr5.2:80047436-80047455 | MS.gene81370:intron | 30.0% |
| !! | TGAGCTAGAATCTAAAGTTT+TGG | - | chr5.2:80047904-80047923 | MS.gene81370:intron | 30.0% |
| !! | TTTCTGAAGTTAAGTGTGAT+CGG | - | chr5.2:80048415-80048434 | MS.gene81370:intron | 30.0% |
| !!! | AGAATCTAAAGTTTTGGAGT+TGG | - | chr5.2:80047910-80047929 | MS.gene81370:intron | 30.0% |
| AAACACGTTGAACAAGATCA+TGG | + | chr5.2:80047214-80047233 | None:intergenic | 35.0% | |
| AACAGAGGAACTAGAAATAG+AGG | + | chr5.2:80050280-80050299 | None:intergenic | 35.0% | |
| AAGATACGATGAATCAACAG+AGG | + | chr5.2:80050295-80050314 | None:intergenic | 35.0% | |
| AAGCCCAAATTTCAGTGTTA+AGG | - | chr5.2:80049084-80049103 | MS.gene81370:CDS | 35.0% | |
| AAGGAAAAAAGGGTTGAAGA+TGG | - | chr5.2:80047680-80047699 | MS.gene81370:intron | 35.0% | |
| AATAGAGGTTTCACTGTTGT+CGG | + | chr5.2:80050265-80050284 | None:intergenic | 35.0% | |
| AATTCACTTTCCATCTAGAG+AGG | + | chr5.2:80048793-80048812 | None:intergenic | 35.0% | |
| ACAAGAAAAAACACGGTTTC+AGG | + | chr5.2:80048474-80048493 | None:intergenic | 35.0% | |
| ACTCTTCTTCATGACTTACA+AGG | - | chr5.2:80047179-80047198 | MS.gene81370:CDS | 35.0% | |
| AGCATCAAGAACTATAGTGT+CGG | + | chr5.2:80047114-80047133 | None:intergenic | 35.0% | |
| AGTGCTTAGCAAAATGAATG+AGG | - | chr5.2:80047580-80047599 | MS.gene81370:intron | 35.0% | |
| AGTGTGATCGGATAAATGTT+TGG | - | chr5.2:80048427-80048446 | MS.gene81370:intron | 35.0% | |
| ATATTATGGTCCTCTCTAGA+TGG | - | chr5.2:80048780-80048799 | MS.gene81370:intron | 35.0% | |
| CAAAATGAATGAGGATTTGG+AGG | - | chr5.2:80047589-80047608 | MS.gene81370:intron | 35.0% | |
| CATCTTTATTCCACGTTACA+TGG | - | chr5.2:80048849-80048868 | MS.gene81370:intron | 35.0% | |
| CATGTAACGTGGAATAAAGA+TGG | + | chr5.2:80048851-80048870 | None:intergenic | 35.0% | |
| CATTAGATGAAAGAGTTGCT+AGG | - | chr5.2:80048176-80048195 | MS.gene81370:intron | 35.0% | |
| CCATCTTCATTTCTTTGCAA+AGG | + | chr5.2:80048322-80048341 | None:intergenic | 35.0% | |
| CCTCAAACAAATCTTAGTTC+TGG | - | chr5.2:80048958-80048977 | MS.gene81370:intron | 35.0% | |
| CCTTTGCAAAGAAATGAAGA+TGG | - | chr5.2:80048319-80048338 | MS.gene81370:intron | 35.0% | |
| CGGAATAACTAACTCCAAAT+AGG | + | chr5.2:80049263-80049282 | None:intergenic | 35.0% | |
| CTGGAAAGAAAACTTCGATA+AGG | + | chr5.2:80049817-80049836 | None:intergenic | 35.0% | |
| CTGTCCTTAACACTGAAATT+TGG | + | chr5.2:80049091-80049110 | None:intergenic | 35.0% | |
| CTTAGGAAGTTAAGTTCATG+AGG | - | chr5.2:80049059-80049078 | MS.gene81370:intron | 35.0% | |
| GAAAACTTCGATAAGGAATG+AGG | + | chr5.2:80049810-80049829 | None:intergenic | 35.0% | |
| GAAATTGAAGGAGAAAATGG+TGG | - | chr5.2:80047841-80047860 | MS.gene81370:intron | 35.0% | |
| GGAAACAGTGAACACAAATT+TGG | - | chr5.2:80048057-80048076 | MS.gene81370:intron | 35.0% | |
| GGAGAAGTTGAAGGAAAAAA+GGG | - | chr5.2:80047670-80047689 | MS.gene81370:intron | 35.0% | |
| TAGAGAGGACCATAATATCA+CGG | + | chr5.2:80048778-80048797 | None:intergenic | 35.0% | |
| TCGTGCTGAAATCTATGATA+AGG | - | chr5.2:80047247-80047266 | MS.gene81370:CDS | 35.0% | |
| TGAGGTTGGAAAAAACATTG+AGG | - | chr5.2:80048285-80048304 | MS.gene81370:intron | 35.0% | |
| TGATTCTAAACCTGCATGTA+TGG | - | chr5.2:80049524-80049543 | MS.gene81370:CDS | 35.0% | |
| TGGAAAAGTTGAAGGAAAAG+TGG | - | chr5.2:80047930-80047949 | MS.gene81370:intron | 35.0% | |
| TGGAAATGTAGTTCAAGAGT+TGG | - | chr5.2:80047649-80047668 | MS.gene81370:intron | 35.0% | |
| TGGAGAAGTTGAAGGAAAAA+AGG | - | chr5.2:80047669-80047688 | MS.gene81370:intron | 35.0% | |
| TGGTCTACAATCTATTCTAC+AGG | + | chr5.2:80049165-80049184 | None:intergenic | 35.0% | |
| TGTTCCAAAAAACTGTCTGA+AGG | + | chr5.2:80049565-80049584 | None:intergenic | 35.0% | |
| TTGATATGAACCATACATGC+AGG | + | chr5.2:80049537-80049556 | None:intergenic | 35.0% | |
| TTTCCATACCGTGAAATTGA+TGG | + | chr5.2:80048345-80048364 | None:intergenic | 35.0% | |
| ! | AAGGATAAAATGGTGGAAGA+TGG | - | chr5.2:80047629-80047648 | MS.gene81370:intron | 35.0% |
| ! | ATTAGGAAGTGCAAAACAGA+AGG | + | chr5.2:80049465-80049484 | None:intergenic | 35.0% |
| ! | ATTAGTGGATGAGAAACGTA+AGG | - | chr5.2:80048114-80048133 | MS.gene81370:intron | 35.0% |
| ! | CAAGTTGAAGGATAAAATGG+TGG | - | chr5.2:80047622-80047641 | MS.gene81370:intron | 35.0% |
| ! | CCAGAACTAAGATTTGTTTG+AGG | + | chr5.2:80048961-80048980 | None:intergenic | 35.0% |
| ! | CTTGTCTCTGGTAAAGTATT+TGG | - | chr5.2:80049341-80049360 | MS.gene81370:CDS | 35.0% |
| ! | GAAGGCTCAAAAAGATCTTT+TGG | - | chr5.2:80047454-80047473 | MS.gene81370:intron | 35.0% |
| ! | GGAGAAAAGAATGTCATTTC+TGG | - | chr5.2:80050132-80050151 | MS.gene81370:CDS | 35.0% |
| ! | TGAAGTGCTATTGATGAACT+TGG | + | chr5.2:80050186-80050205 | None:intergenic | 35.0% |
| ! | TTAGTGGATGAGAAACGTAA+GGG | - | chr5.2:80048115-80048134 | MS.gene81370:intron | 35.0% |
| ! | TTTGAAGCTGAAGGGAAAAA+GGG | - | chr5.2:80047754-80047773 | MS.gene81370:intron | 35.0% |
| ! | TTTGGAGTTGGAAAAGTTGA+AGG | - | chr5.2:80047922-80047941 | MS.gene81370:intron | 35.0% |
| !! | AAGATCTTTTTGAGCCTTCT+TGG | + | chr5.2:80047453-80047472 | None:intergenic | 35.0% |
| !! | AAGTATTGGAAGGTATACAC+TGG | - | chr5.2:80049600-80049619 | MS.gene81370:CDS | 35.0% |
| !! | GAATGTTAAGTTGATGTGTG+AGG | - | chr5.2:80047511-80047530 | MS.gene81370:intron | 35.0% |
| !! | TGCTGATGAAAAGTATTGGA+AGG | - | chr5.2:80049590-80049609 | MS.gene81370:CDS | 35.0% |
| !!! | CATTTTGAAGCTCATGTTGA+AGG | + | chr5.2:80047325-80047344 | None:intergenic | 35.0% |
| !!! | TGATAAGGTTGAAGGTGTTT+TGG | - | chr5.2:80047262-80047281 | MS.gene81370:CDS | 35.0% |
| !!! | TGTTCCTTCAGACAGTTTTT+TGG | - | chr5.2:80049558-80049577 | MS.gene81370:CDS | 35.0% |
| !!! | TTTTGAAGCTGAAGGGAAAA+AGG | - | chr5.2:80047753-80047772 | MS.gene81370:intron | 35.0% |
| AAAGAATGCAGAGTTAGAGC+AGG | - | chr5.2:80047727-80047746 | MS.gene81370:intron | 40.0% | |
| AAGAAAGTGGTTGAGATGAC+AGG | - | chr5.2:80049236-80049255 | MS.gene81370:CDS | 40.0% | |
| AGAAAGTGGTTGAGATGACA+GGG | - | chr5.2:80049237-80049256 | MS.gene81370:CDS | 40.0% | |
| AGAGAGGACCATAATATCAC+GGG | + | chr5.2:80048777-80048796 | None:intergenic | 40.0% | |
| AGATGAAAGAGTTGCTAGGT+TGG | - | chr5.2:80048180-80048199 | MS.gene81370:intron | 40.0% | |
| AGATGGAAATGCACTTGATG+TGG | - | chr5.2:80047697-80047716 | MS.gene81370:intron | 40.0% | |
| ATAGAGGTTTCACTGTTGTC+GGG | + | chr5.2:80050264-80050283 | None:intergenic | 40.0% | |
| ATATTCAAACTTCCACCAGC+TGG | + | chr5.2:80050051-80050070 | None:intergenic | 40.0% | |
| CATAAATCTTGACGACGAAG+AGG | - | chr5.2:80050089-80050108 | MS.gene81370:CDS | 40.0% | |
| CATGGCCAAAAGAAAGCTAT+TGG | - | chr5.2:80048867-80048886 | MS.gene81370:intron | 40.0% | |
| GAAGATGGCCATCAATTTCA+CGG | - | chr5.2:80048334-80048353 | MS.gene81370:intron | 40.0% | |
| GATGAAAAGAATGCTTTGGC+TGG | - | chr5.2:80048007-80048026 | MS.gene81370:intron | 40.0% | |
| GATGATCTGTGTATGTCTCA+AGG | - | chr5.2:80050111-80050130 | MS.gene81370:CDS | 40.0% | |
| GCCATCTCAATTGTTTCACT+GGG | + | chr5.2:80049630-80049649 | None:intergenic | 40.0% | |
| GCTATTGATGAACTTGGAGT+TGG | + | chr5.2:80050180-80050199 | None:intergenic | 40.0% | |
| GGAGGATGAAAAGAATGCTT+TGG | - | chr5.2:80048003-80048022 | MS.gene81370:intron | 40.0% | |
| GTCAGCAACATTTGCAAACT+TGG | + | chr5.2:80050217-80050236 | None:intergenic | 40.0% | |
| GTCATCTCAACCACTTTCTT+GGG | + | chr5.2:80049236-80049255 | None:intergenic | 40.0% | |
| GTGAAACAATTGAGATGGCA+AGG | - | chr5.2:80049631-80049650 | MS.gene81370:CDS | 40.0% | |
| GTGTGAGGTTGAGAAATTGA+AGG | - | chr5.2:80047829-80047848 | MS.gene81370:intron | 40.0% | |
| GTTAGTTAGAAGCTTGTCTC+TGG | - | chr5.2:80049329-80049348 | MS.gene81370:CDS | 40.0% | |
| GTTGAATGGTATACGCAAGA+AGG | - | chr5.2:80049210-80049229 | MS.gene81370:CDS | 40.0% | |
| TAAGGACAGAACTATGCTTC+AGG | - | chr5.2:80049102-80049121 | MS.gene81370:CDS | 40.0% | |
| TCAAGAGTTGGAGAAGTTGA+AGG | - | chr5.2:80047661-80047680 | MS.gene81370:intron | 40.0% | |
| TGCCATCTCAATTGTTTCAC+TGG | + | chr5.2:80049631-80049650 | None:intergenic | 40.0% | |
| TGGCAATTATAAGCAAGCTG+AGG | - | chr5.2:80048077-80048096 | MS.gene81370:intron | 40.0% | |
| TGTCATCTCAACCACTTTCT+TGG | + | chr5.2:80049237-80049256 | None:intergenic | 40.0% | |
| ! | AAGCTTGTTCCTTCTTCTCT+TGG | - | chr5.2:80048823-80048842 | MS.gene81370:intron | 40.0% |
| ! | AAGGAGAAAATGGTGGAAGA+TGG | - | chr5.2:80047848-80047867 | MS.gene81370:intron | 40.0% |
| ! | AGCTTGTTCCTTCTTCTCTT+GGG | - | chr5.2:80048824-80048843 | MS.gene81370:intron | 40.0% |
| ! | ATACACCAACCTTGTTTCGA+AGG | + | chr5.2:80047982-80048001 | None:intergenic | 40.0% |
| ! | ATCAAGAACTATAGTGTCGG+TGG | + | chr5.2:80047111-80047130 | None:intergenic | 40.0% |
| ! | ATTGGAAGGTATACACTGGA+AGG | - | chr5.2:80049604-80049623 | MS.gene81370:CDS | 40.0% |
| ! | CTTGTTCAACGTGTTTTGCT+TGG | - | chr5.2:80047218-80047237 | MS.gene81370:CDS | 40.0% |
| ! | GAGAGCCAATAGCTTTCTTT+TGG | + | chr5.2:80048875-80048894 | None:intergenic | 40.0% |
| ! | GGGTGAGATTAACAAGTTGA+AGG | - | chr5.2:80047610-80047629 | MS.gene81370:intron | 40.0% |
| ! | GGTGAGTTAGGTTCGATTTT+AGG | + | chr5.2:80047086-80047105 | None:intergenic | 40.0% |
| ! | GTTCTTGATGCTGATGATGT+TGG | - | chr5.2:80047122-80047141 | MS.gene81370:CDS | 40.0% |
| ! | TTTCTTTTGGCCATGTAACG+TGG | + | chr5.2:80048862-80048881 | None:intergenic | 40.0% |
| !! | AAACAAGGTTGGTGTATTGG+AGG | - | chr5.2:80047985-80048004 | MS.gene81370:intron | 40.0% |
| !! | AACAAATCTTAGTTCTGGGG+AGG | - | chr5.2:80048963-80048982 | MS.gene81370:intron | 40.0% |
| !! | CATTTCTGGAATTTGCGTGA+AGG | - | chr5.2:80050146-80050165 | MS.gene81370:CDS | 40.0% |
| !! | TCGAAACAAGGTTGGTGTAT+TGG | - | chr5.2:80047982-80048001 | MS.gene81370:intron | 40.0% |
| !!! | ACCAATTGTGTTTTGATCGC+GGG | - | chr5.2:80049181-80049200 | MS.gene81370:CDS | 40.0% |
| !!! | GACCAATTGTGTTTTGATCG+CGG | - | chr5.2:80049180-80049199 | MS.gene81370:CDS | 40.0% |
| !!! | TGAAGGTGTTTTGGTGACAA+GGG | - | chr5.2:80047271-80047290 | MS.gene81370:CDS | 40.0% |
| !!! | TGTTTTGGTGACAAGGGATT+TGG | - | chr5.2:80047277-80047296 | MS.gene81370:CDS | 40.0% |
| !!! | TTGAAGGTGTTTTGGTGACA+AGG | - | chr5.2:80047270-80047289 | MS.gene81370:CDS | 40.0% |
| AAGATGGACCCAAGAGAAGA+AGG | + | chr5.2:80048835-80048854 | None:intergenic | 45.0% | |
| AAGGGAAAAAGGGTGGAAGA+TGG | - | chr5.2:80047764-80047783 | MS.gene81370:intron | 45.0% | |
| ACCCGCGATCAAAACACAAT+TGG | + | chr5.2:80049185-80049204 | None:intergenic | 45.0% | |
| ACCTGCTGTGGAAACTACTT+AGG | - | chr5.2:80049042-80049061 | MS.gene81370:intron | 45.0% | |
| ACTATTCCTTCTGGACGCTA+CGG | + | chr5.2:80049283-80049302 | None:intergenic | 45.0% | |
| AGGCATCTACACTCACAGAA+AGG | + | chr5.2:80048219-80048238 | None:intergenic | 45.0% | |
| ATTGAGATGGCAAGGTGTAG+CGG | - | chr5.2:80049639-80049658 | MS.gene81370:CDS | 45.0% | |
| CAGAACTATGCTTCAGGAAC+TGG | - | chr5.2:80049108-80049127 | MS.gene81370:CDS | 45.0% | |
| CATGACCTTCGAAACAAGGT+TGG | - | chr5.2:80047974-80047993 | MS.gene81370:intron | 45.0% | |
| CCATAATATCACGGGGCTAA+TGG | + | chr5.2:80048769-80048788 | None:intergenic | 45.0% | |
| CCATTAGCCCCGTGATATTA+TGG | - | chr5.2:80048766-80048785 | MS.gene81370:intron | 45.0% | |
| GAGAGGACCATAATATCACG+GGG | + | chr5.2:80048776-80048795 | None:intergenic | 45.0% | |
| GCCCAGTGAAACAATTGAGA+TGG | - | chr5.2:80049626-80049645 | MS.gene81370:CDS | 45.0% | |
| TAGAGGTTTCACTGTTGTCG+GGG | + | chr5.2:80050263-80050282 | None:intergenic | 45.0% | |
| TCCTAAGTAGTTTCCACAGC+AGG | + | chr5.2:80049046-80049065 | None:intergenic | 45.0% | |
| TCTCCATGACCTTCGAAACA+AGG | - | chr5.2:80047970-80047989 | MS.gene81370:intron | 45.0% | |
| TCTGTGAGTGTAGATGCCTA+TGG | - | chr5.2:80048220-80048239 | MS.gene81370:intron | 45.0% | |
| TGGCCATCAATTTCACGGTA+TGG | - | chr5.2:80048339-80048358 | MS.gene81370:intron | 45.0% | |
| TTGAGATGACAGGGCCTATT+TGG | - | chr5.2:80049246-80049265 | MS.gene81370:CDS | 45.0% | |
| ! | ATCTCTCATTTTGTGCCAGC+TGG | - | chr5.2:80050033-80050052 | MS.gene81370:CDS | 45.0% |
| ! | CAACCTTGTTTCGAAGGTCA+TGG | + | chr5.2:80047976-80047995 | None:intergenic | 45.0% |
| ! | GCTATTTAGGTTAGGCAGAG+AGG | - | chr5.2:80049713-80049732 | MS.gene81370:CDS | 45.0% |
| ! | TGAAAGAGTTGCTAGGTTGG+AGG | - | chr5.2:80048183-80048202 | MS.gene81370:intron | 45.0% |
| ! | TGATGATGTTGGAGCAGATC+CGG | - | chr5.2:80047133-80047152 | MS.gene81370:CDS | 45.0% |
| !! | AGAACTATAGTGTCGGTGGA+AGG | + | chr5.2:80047107-80047126 | None:intergenic | 45.0% |
| !! | TAAGGAGCATTGAGAGTGAC+AGG | - | chr5.2:80048925-80048944 | MS.gene81370:intron | 45.0% |
| !! | TATGGTGGTGGAAGCAATGA+GGG | - | chr5.2:80048238-80048257 | MS.gene81370:intron | 45.0% |
| !!! | CAGGAGGTTTTGAAGCTGAA+GGG | - | chr5.2:80047746-80047765 | MS.gene81370:intron | 45.0% |
| ACACGAGAACAAGTAGAGGC+TGG | - | chr5.2:80047545-80047564 | MS.gene81370:intron | 50.0% | |
| AGAACAAGTAGAGGCTGGGA+AGG | - | chr5.2:80047550-80047569 | MS.gene81370:intron | 50.0% | |
| AGTGTAGATGCCTATGGTGG+TGG | - | chr5.2:80048226-80048245 | MS.gene81370:intron | 50.0% | |
| CACGAGAACAAGTAGAGGCT+GGG | - | chr5.2:80047546-80047565 | MS.gene81370:intron | 50.0% | |
| CTCATTGCTTCCACCACCAT+AGG | + | chr5.2:80048239-80048258 | None:intergenic | 50.0% | |
| GAAGCTGAAGGGAAAAAGGG+TGG | - | chr5.2:80047757-80047776 | MS.gene81370:intron | 50.0% | |
| GAATGCAGAGTTAGAGCAGG+AGG | - | chr5.2:80047730-80047749 | MS.gene81370:intron | 50.0% | |
| GCTGACACGAGAACAAGTAG+AGG | - | chr5.2:80047541-80047560 | MS.gene81370:intron | 50.0% | |
| GTGAGTGTAGATGCCTATGG+TGG | - | chr5.2:80048223-80048242 | MS.gene81370:intron | 50.0% | |
| GTTATTCCGTAGCGTCCAGA+AGG | - | chr5.2:80049274-80049293 | MS.gene81370:CDS | 50.0% | |
| TAGGTTAGGCAGAGAGGAGA+GGG | - | chr5.2:80049719-80049738 | MS.gene81370:CDS | 50.0% | |
| TTAGGTTAGGCAGAGAGGAG+AGG | - | chr5.2:80049718-80049737 | MS.gene81370:CDS | 50.0% | |
| ! | AGAGGAGAGGGTGTGAATTG+AGG | - | chr5.2:80049731-80049750 | MS.gene81370:CDS | 50.0% |
| ! | GAGTGATGAGTTGGAGTGTG+AGG | - | chr5.2:80047814-80047833 | MS.gene81370:intron | 50.0% |
| ! | TCTCATTTTGTGCCAGCTGG+TGG | - | chr5.2:80050036-80050055 | MS.gene81370:CDS | 50.0% |
| !! | AGAGGATGTTGGTGGCAATG+AGG | - | chr5.2:80048267-80048286 | MS.gene81370:intron | 50.0% |
| !! | ATGGTGGTGGAAGCAATGAG+GGG | - | chr5.2:80048239-80048258 | MS.gene81370:intron | 50.0% |
| !! | CTATGGTGGTGGAAGCAATG+AGG | - | chr5.2:80048237-80048256 | MS.gene81370:intron | 50.0% |
| !! | GATGTTGGTGGCAATGAGGT+TGG | - | chr5.2:80048271-80048290 | MS.gene81370:intron | 50.0% |
| !!! | GCAGGAGGTTTTGAAGCTGA+AGG | - | chr5.2:80047745-80047764 | MS.gene81370:intron | 50.0% |
| !!! | GTGTTTTGATCGCGGGTCAA+GGG | - | chr5.2:80049188-80049207 | MS.gene81370:CDS | 50.0% |
| !!! | TGTGTTTTGATCGCGGGTCA+AGG | - | chr5.2:80049187-80049206 | MS.gene81370:CDS | 50.0% |
| AAGCAATGAGGGGGATGGAG+AGG | - | chr5.2:80048249-80048268 | MS.gene81370:intron | 55.0% | |
| ATCGCGGGTCAAGGGTTGAA+TGG | - | chr5.2:80049196-80049215 | MS.gene81370:CDS | 55.0% | |
| CGCAAGAAGGCCCAAGAAAG+TGG | - | chr5.2:80049223-80049242 | MS.gene81370:CDS | 55.0% | |
| GTTGCAGAACAGACCTGCTG+TGG | - | chr5.2:80049030-80049049 | MS.gene81370:intron | 55.0% | |
| TGATGTTGGAGCAGATCCGG+TGG | - | chr5.2:80047136-80047155 | MS.gene81370:CDS | 55.0% | |
| ! | GTGTCGGTGGAAGGTGAGTT+AGG | + | chr5.2:80047098-80047117 | None:intergenic | 55.0% |
| !! | TGGTGGTGGAAGCAATGAGG+GGG | - | chr5.2:80048240-80048259 | MS.gene81370:intron | 55.0% |
| GAGGGGGATGGAGAGGATGT+TGG | - | chr5.2:80048256-80048275 | MS.gene81370:intron | 60.0% | |
| GGGGATGGAGAGGATGTTGG+TGG | - | chr5.2:80048259-80048278 | MS.gene81370:intron | 60.0% | |
| GGTGGAAGCAATGAGGGGGA+TGG | - | chr5.2:80048244-80048263 | MS.gene81370:intron | 60.0% | |
| TGTTGGAGCAGATCCGGTGG+TGG | - | chr5.2:80047139-80047158 | MS.gene81370:CDS | 60.0% | |
| TCCTCCTCCTCCACCACCAC+CGG | + | chr5.2:80047155-80047174 | None:intergenic | 65.0% | |
| ! | TGGAGCAGATCCGGTGGTGG+TGG | - | chr5.2:80047142-80047161 | MS.gene81370:CDS | 65.0% |
| !! | AGATCCGGTGGTGGTGGAGG+AGG | - | chr5.2:80047148-80047167 | MS.gene81370:CDS | 65.0% |
| !! | AGCAGATCCGGTGGTGGTGG+AGG | - | chr5.2:80047145-80047164 | MS.gene81370:CDS | 65.0% |
| !! | TCCGGTGGTGGTGGAGGAGG+AGG | - | chr5.2:80047151-80047170 | MS.gene81370:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 80047071 | 80050362 | 80047071 | ID=MS.gene81370 |
| chr5.2 | mRNA | 80047071 | 80050362 | 80047071 | ID=MS.gene81370.t1;Parent=MS.gene81370 |
| chr5.2 | exon | 80049078 | 80050362 | 80049078 | ID=MS.gene81370.t1.exon1;Parent=MS.gene81370.t1 |
| chr5.2 | CDS | 80049078 | 80050362 | 80049078 | ID=cds.MS.gene81370.t1;Parent=MS.gene81370.t1 |
| chr5.2 | exon | 80047071 | 80047381 | 80047071 | ID=MS.gene81370.t1.exon2;Parent=MS.gene81370.t1 |
| chr5.2 | CDS | 80047071 | 80047381 | 80047071 | ID=cds.MS.gene81370.t1;Parent=MS.gene81370.t1 |
| Gene Sequence |
| Protein sequence |
