Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84406.t1 | KEH38065.1 | 89.6 | 528 | 28 | 2 | 1 | 503 | 21 | 546 | 2.20E-249 | 871.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84406.t1 | Q9XQU4 | 83.5 | 528 | 60 | 3 | 2 | 503 | 1 | 527 | 5.8e-235 | 814.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84406.t1 | A0A072VIS8 | 89.6 | 528 | 28 | 2 | 1 | 503 | 21 | 546 | 1.6e-249 | 871.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene84406 | 0.802091 | 6.61E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene84406 | 0.844941 | 5.53E-59 | -1.69E-46 |
| MS.gene049356 | MS.gene84406 | 0.831221 | 1.89E-55 | -1.69E-46 |
| MS.gene049389 | MS.gene84406 | 0.830996 | 2.14E-55 | -1.69E-46 |
| MS.gene049427 | MS.gene84406 | 0.857128 | 2.01E-62 | -1.69E-46 |
| MS.gene049491 | MS.gene84406 | 0.814378 | 1.59E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene84406 | 0.82188 | 3.19E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene84406 | 0.821454 | 4.00E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene84406 | 0.819483 | 1.13E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene84406 | 0.805535 | 1.27E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene84406 | 0.803481 | 3.42E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene84406 | 0.807275 | 5.47E-50 | -1.69E-46 |
| MS.gene050099 | MS.gene84406 | 0.805141 | 1.54E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene84406 | 0.807872 | 4.09E-50 | -1.69E-46 |
| MS.gene050231 | MS.gene84406 | 0.816913 | 4.33E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene84406 | 0.913943 | 3.42E-84 | -1.69E-46 |
| MS.gene050406 | MS.gene84406 | 0.803076 | 4.14E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene84406 | 0.822699 | 2.06E-53 | -1.69E-46 |
| MS.gene050464 | MS.gene84406 | 0.812229 | 4.71E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene84406 | 0.831061 | 2.07E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene84406 | 0.80401 | 2.65E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene84406 | 0.890146 | 1.28E-73 | -1.69E-46 |
| MS.gene050767 | MS.gene84406 | 0.815798 | 7.69E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene84406 | 0.816975 | 4.19E-52 | -1.69E-46 |
| MS.gene050783 | MS.gene84406 | 0.864283 | 1.36E-64 | -1.69E-46 |
| MS.gene050812 | MS.gene84406 | 0.889529 | 2.23E-73 | -1.69E-46 |
| MS.gene05101 | MS.gene84406 | 0.868904 | 4.62E-66 | -1.69E-46 |
| MS.gene05105 | MS.gene84406 | 0.853995 | 1.65E-61 | -1.69E-46 |
| MS.gene051387 | MS.gene84406 | 0.862253 | 5.78E-64 | -1.69E-46 |
| MS.gene051471 | MS.gene84406 | 0.860411 | 2.11E-63 | -1.69E-46 |
| MS.gene051525 | MS.gene84406 | 0.832626 | 8.49E-56 | -1.69E-46 |
| MS.gene051582 | MS.gene84406 | 0.891999 | 2.38E-74 | -1.69E-46 |
| MS.gene051605 | MS.gene84406 | 0.804983 | 1.66E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene84406 | 0.814196 | 1.74E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene84406 | 0.825678 | 4.11E-54 | -1.69E-46 |
| MS.gene052178 | MS.gene84406 | 0.810965 | 8.87E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene84406 | 0.899563 | 1.75E-77 | -1.69E-46 |
| MS.gene052207 | MS.gene84406 | 0.815809 | 7.64E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene84406 | 0.843388 | 1.44E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene84406 | 0.876171 | 1.73E-68 | -1.69E-46 |
| MS.gene052322 | MS.gene84406 | 0.807552 | 4.78E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene84406 | 0.851235 | 1.01E-60 | -1.69E-46 |
| MS.gene052340 | MS.gene84406 | 0.861668 | 8.73E-64 | -1.69E-46 |
| MS.gene052421 | MS.gene84406 | 0.854763 | 9.91E-62 | -1.69E-46 |
| MS.gene052481 | MS.gene84406 | 0.80689 | 6.60E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene84406 | 0.862599 | 4.52E-64 | -1.69E-46 |
| MS.gene052767 | MS.gene84406 | 0.80301 | 4.28E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene84406 | 0.809357 | 1.97E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene84406 | 0.817769 | 2.78E-52 | -1.69E-46 |
| MS.gene053107 | MS.gene84406 | 0.827982 | 1.16E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene84406 | 0.810855 | 9.37E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene84406 | 0.824255 | 8.91E-54 | -1.69E-46 |
| MS.gene053557 | MS.gene84406 | 0.833406 | 5.43E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene84406 | 0.800841 | 1.19E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene84406 | 0.852498 | 4.44E-61 | -1.69E-46 |
| MS.gene053907 | MS.gene84406 | 0.810457 | 1.14E-50 | -1.69E-46 |
| MS.gene053928 | MS.gene84406 | 0.841037 | 6.06E-58 | -1.69E-46 |
| MS.gene054010 | MS.gene84406 | 0.80469 | 1.91E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene84406 | 0.889651 | 2.00E-73 | -1.69E-46 |
| MS.gene054183 | MS.gene84406 | 0.806174 | 9.35E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene84406 | 0.832404 | 9.64E-56 | -1.69E-46 |
| MS.gene05455 | MS.gene84406 | 0.872976 | 2.10E-67 | -1.69E-46 |
| MS.gene054719 | MS.gene84406 | 0.82552 | 4.48E-54 | -1.69E-46 |
| MS.gene054802 | MS.gene84406 | 0.816687 | 4.86E-52 | -1.69E-46 |
| MS.gene054803 | MS.gene84406 | 0.819641 | 1.04E-52 | -1.69E-46 |
| MS.gene054804 | MS.gene84406 | 0.818305 | 2.10E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene84406 | 0.809511 | 1.83E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene84406 | 0.870183 | 1.77E-66 | -1.69E-46 |
| MS.gene055277 | MS.gene84406 | 0.831728 | 1.42E-55 | -1.69E-46 |
| MS.gene055369 | MS.gene84406 | 0.823882 | 1.09E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene84406 | 0.857722 | 1.34E-62 | -1.69E-46 |
| MS.gene055412 | MS.gene84406 | 0.859799 | 3.22E-63 | -1.69E-46 |
| MS.gene055422 | MS.gene84406 | 0.863163 | 3.03E-64 | -1.69E-46 |
| MS.gene055428 | MS.gene84406 | 0.85053 | 1.60E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene84406 | 0.802969 | 4.36E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene84406 | 0.817599 | 3.03E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene84406 | 0.850704 | 1.43E-60 | -1.69E-46 |
| MS.gene055564 | MS.gene84406 | 0.810283 | 1.24E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene84406 | 0.827774 | 1.30E-54 | -1.69E-46 |
| MS.gene05594 | MS.gene84406 | 0.800044 | 1.73E-48 | -1.69E-46 |
| MS.gene05602 | MS.gene84406 | 0.810554 | 1.09E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene84406 | 0.813847 | 2.08E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene84406 | 0.896167 | 4.78E-76 | -1.69E-46 |
| MS.gene056410 | MS.gene84406 | 0.817486 | 3.22E-52 | -1.69E-46 |
| MS.gene056497 | MS.gene84406 | 0.800084 | 1.70E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene84406 | 0.804222 | 2.40E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene84406 | 0.802967 | 4.36E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene84406 | 0.845471 | 3.98E-59 | -1.69E-46 |
| MS.gene056659 | MS.gene84406 | 0.836623 | 8.39E-57 | -1.69E-46 |
| MS.gene056723 | MS.gene84406 | 0.836578 | 8.62E-57 | -1.69E-46 |
| MS.gene056796 | MS.gene84406 | 0.812057 | 5.13E-51 | -1.69E-46 |
| MS.gene056902 | MS.gene84406 | 0.803789 | 2.95E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene84406 | 0.857429 | 1.64E-62 | -1.69E-46 |
| MS.gene05702 | MS.gene84406 | 0.842389 | 2.66E-58 | -1.69E-46 |
| MS.gene057121 | MS.gene84406 | 0.842846 | 2.01E-58 | -1.69E-46 |
| MS.gene057124 | MS.gene84406 | 0.845374 | 4.23E-59 | -1.69E-46 |
| MS.gene057146 | MS.gene84406 | 0.84839 | 6.32E-60 | -1.69E-46 |
| MS.gene057245 | MS.gene84406 | 0.822467 | 2.33E-53 | -1.69E-46 |
| MS.gene057396 | MS.gene84406 | 0.823028 | 1.73E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene84406 | 0.805489 | 1.30E-49 | -1.69E-46 |
| MS.gene057448 | MS.gene84406 | 0.843301 | 1.52E-58 | -1.69E-46 |
| MS.gene057449 | MS.gene84406 | 0.837676 | 4.52E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene84406 | 0.852389 | 4.77E-61 | -1.69E-46 |
| MS.gene057469 | MS.gene84406 | 0.805275 | 1.44E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene84406 | 0.835882 | 1.30E-56 | -1.69E-46 |
| MS.gene057823 | MS.gene84406 | 0.839838 | 1.25E-57 | -1.69E-46 |
| MS.gene057825 | MS.gene84406 | 0.804831 | 1.79E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene84406 | 0.879119 | 1.62E-69 | -1.69E-46 |
| MS.gene058007 | MS.gene84406 | 0.835484 | 1.63E-56 | -1.69E-46 |
| MS.gene058019 | MS.gene84406 | 0.825845 | 3.75E-54 | -1.69E-46 |
| MS.gene058082 | MS.gene84406 | 0.824078 | 9.81E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene84406 | 0.852362 | 4.85E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene84406 | 0.859423 | 4.18E-63 | -1.69E-46 |
| MS.gene058233 | MS.gene84406 | 0.846365 | 2.27E-59 | -1.69E-46 |
| MS.gene058276 | MS.gene84406 | 0.829941 | 3.88E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene84406 | 0.893502 | 5.92E-75 | -1.69E-46 |
| MS.gene058365 | MS.gene84406 | 0.868438 | 6.53E-66 | -1.69E-46 |
| MS.gene05842 | MS.gene84406 | 0.805928 | 1.05E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene84406 | 0.889374 | 2.56E-73 | -1.69E-46 |
| MS.gene058700 | MS.gene84406 | 0.860499 | 1.98E-63 | -1.69E-46 |
| MS.gene058787 | MS.gene84406 | 0.826155 | 3.17E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene84406 | 0.844898 | 5.68E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene84406 | 0.81204 | 5.18E-51 | -1.69E-46 |
| MS.gene058948 | MS.gene84406 | 0.804346 | 2.26E-49 | -1.69E-46 |
| MS.gene058949 | MS.gene84406 | 0.821286 | 4.38E-53 | -1.69E-46 |
| MS.gene058993 | MS.gene84406 | 0.808735 | 2.68E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene84406 | 0.872618 | 2.77E-67 | -1.69E-46 |
| MS.gene059141 | MS.gene84406 | 0.844247 | 8.51E-59 | -1.69E-46 |
| MS.gene059342 | MS.gene84406 | 0.80836 | 3.22E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene84406 | 0.805524 | 1.28E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene84406 | 0.839359 | 1.66E-57 | -1.69E-46 |
| MS.gene059462 | MS.gene84406 | 0.801601 | 8.34E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene84406 | 0.809775 | 1.60E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene84406 | 0.817347 | 3.46E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene84406 | 0.870222 | 1.72E-66 | -1.69E-46 |
| MS.gene05959 | MS.gene84406 | 0.852 | 6.15E-61 | -1.69E-46 |
| MS.gene059676 | MS.gene84406 | 0.893202 | 7.83E-75 | -1.69E-46 |
| MS.gene059688 | MS.gene84406 | 0.895942 | 5.93E-76 | -1.69E-46 |
| MS.gene059692 | MS.gene84406 | 0.892459 | 1.56E-74 | -1.69E-46 |
| MS.gene059695 | MS.gene84406 | 0.898206 | 6.66E-77 | -1.69E-46 |
| MS.gene059708 | MS.gene84406 | 0.800717 | 1.26E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene84406 | 0.8289 | 6.95E-55 | -1.69E-46 |
| MS.gene059894 | MS.gene84406 | 0.832872 | 7.37E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene84406 | 0.848931 | 4.48E-60 | -1.69E-46 |
| MS.gene06037 | MS.gene84406 | 0.806857 | 6.71E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene84406 | 0.837872 | 4.02E-57 | -1.69E-46 |
| MS.gene060407 | MS.gene84406 | 0.861477 | 9.98E-64 | -1.69E-46 |
| MS.gene060804 | MS.gene84406 | 0.806606 | 7.58E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene84406 | 0.807859 | 4.12E-50 | -1.69E-46 |
| MS.gene06090 | MS.gene84406 | 0.842171 | 3.04E-58 | -1.69E-46 |
| MS.gene061049 | MS.gene84406 | 0.8573 | 1.79E-62 | -1.69E-46 |
| MS.gene061051 | MS.gene84406 | -0.842996 | 1.84E-58 | -1.69E-46 |
| MS.gene061154 | MS.gene84406 | 0.826839 | 2.18E-54 | -1.69E-46 |
| MS.gene061159 | MS.gene84406 | 0.823031 | 1.72E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene84406 | 0.842875 | 1.98E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84406.t1 | MTR_2g460600 | 94.318 | 528 | 3 | 2 | 1 | 503 | 21 | 546 | 0.0 | 976 |
| MS.gene84406.t1 | MTR_7g094800 | 28.199 | 422 | 272 | 13 | 87 | 485 | 118 | 531 | 1.97e-35 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84406.t1 | AT2G18710 | 83.058 | 484 | 72 | 3 | 30 | 503 | 66 | 549 | 0.0 | 804 |
| MS.gene84406.t1 | AT2G31530 | 28.471 | 425 | 266 | 13 | 87 | 485 | 147 | 559 | 1.25e-33 | 134 |
Find 93 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGCTTACCTACCGTTTA+AGG | 0.117513 | 2.4:-37234065 | MS.gene84406:intron |
| GAGGATAGTTCAATTGATTT+TGG | 0.223790 | 2.4:-37235739 | MS.gene84406:CDS |
| TGCACACTTGACTGCATTCC+GGG | 0.270529 | 2.4:-37233141 | MS.gene84406:CDS |
| AGGTTCCATTCCCAAGTTTC+AGG | 0.271250 | 2.4:+37234388 | None:intergenic |
| TCTTACTTGCCAGCTTCTTT+TGG | 0.293036 | 2.4:-37234339 | MS.gene84406:CDS |
| AATCTAGACGCGTAGTTAAT+AGG | 0.304266 | 2.4:+37234115 | None:intergenic |
| TCTTAGTCGAATATCAGTTC+TGG | 0.312877 | 2.4:-37233216 | MS.gene84406:CDS |
| ACTGCATTCCGGGGATTTGC+TGG | 0.320442 | 2.4:-37233131 | MS.gene84406:CDS |
| GCTATCAAAAGTATGTTAAA+TGG | 0.328201 | 2.4:+37233492 | None:intergenic |
| ACATCTATTCTTATTCTTGT+TGG | 0.328592 | 2.4:-37233107 | MS.gene84406:CDS |
| CTGCACACTTGACTGCATTC+CGG | 0.330585 | 2.4:-37233142 | MS.gene84406:CDS |
| AATTGTTCGCTCACATCATC+TGG | 0.339654 | 2.4:+37233432 | None:intergenic |
| TCCTTCTTTCTGTTGGTAGT+TGG | 0.350967 | 2.4:-37234255 | MS.gene84406:CDS |
| ACATCATCGTTAGCTCTTCC+TGG | 0.375335 | 2.4:-37233864 | MS.gene84406:CDS |
| GCAGTCTGCTCAACAATTGC+AGG | 0.392772 | 2.4:+37233161 | None:intergenic |
| CAAATTACTGACCTGAAACT+TGG | 0.408846 | 2.4:-37234399 | MS.gene84406:CDS |
| CCGTGATTACAACGTACATT+GGG | 0.408942 | 2.4:-37234425 | MS.gene84406:CDS |
| CTTAGTCGAATATCAGTTCT+GGG | 0.412406 | 2.4:-37233215 | MS.gene84406:CDS |
| TTCTGAAGATCTTGCAACTT+GGG | 0.415468 | 2.4:+37235460 | None:intergenic |
| TTCTTCAAAGGTCCTCTGCC+AGG | 0.418038 | 2.4:-37235712 | MS.gene84406:CDS |
| CATTGTGTCCTTCTTTCTGT+TGG | 0.429476 | 2.4:-37234262 | MS.gene84406:CDS |
| AGTTGGAATTGTCTATGTTC+AGG | 0.434605 | 2.4:-37234238 | MS.gene84406:intron |
| TTTGGCAGGTCAATAGTTCT+GGG | 0.435453 | 2.4:-37233908 | MS.gene84406:intron |
| CTTCTTGTATTGTCAAGGCT+TGG | 0.442770 | 2.4:-37235667 | MS.gene84406:CDS |
| AGGAGTAGCAGCTGCAATAG+AGG | 0.448637 | 2.4:-37235758 | MS.gene84406:CDS |
| AGACTTGGCATATGCTCTCT+TGG | 0.449449 | 2.4:-37235538 | MS.gene84406:CDS |
| ACCAATACCACCACCAGAAA+AGG | 0.461774 | 2.4:+37235561 | None:intergenic |
| TGTTGGATTCGCCATTGTAC+AGG | 0.467660 | 2.4:-37235383 | MS.gene84406:intron |
| TACACTCGATATGCTTCTGT+TGG | 0.467789 | 2.4:-37235400 | MS.gene84406:CDS |
| TAGGGCTTCTTGTATTGTCA+AGG | 0.468985 | 2.4:-37235672 | MS.gene84406:CDS |
| CGGACACACCACCTGGGAGA+AGG | 0.472296 | 2.4:+37236099 | None:intergenic |
| GATGATGTAGAAAATATGAT+AGG | 0.473627 | 2.4:+37233879 | None:intergenic |
| GGTACTTTAGCACGTTTCAC+TGG | 0.478650 | 2.4:-37233843 | MS.gene84406:CDS |
| GGACACACCACCTGGGAGAA+GGG | 0.478694 | 2.4:+37236100 | None:intergenic |
| AAAGATGAGAGGACCTTAAA+CGG | 0.479005 | 2.4:+37234052 | None:intergenic |
| TTTCTGAAGATCTTGCAACT+TGG | 0.479036 | 2.4:+37235459 | None:intergenic |
| TATGTTAAATGGAAGATAGA+AGG | 0.481243 | 2.4:+37233503 | None:intergenic |
| TGTTGTAAAGTCATTTACAT+AGG | 0.488090 | 2.4:+37234488 | None:intergenic |
| AAGAAGAGTTAATACCTAAC+GGG | 0.496614 | 2.4:+37235854 | None:intergenic |
| TCTGTTATCTTATTGACACT+TGG | 0.501427 | 2.4:-37234450 | MS.gene84406:CDS |
| CAGAAAAGAGAAGGTGAGGC+TGG | 0.502761 | 2.4:-37235442 | MS.gene84406:CDS |
| AGTGTAATAGTAGTTGAAGA+AGG | 0.517143 | 2.4:+37233470 | None:intergenic |
| GCAGAGCCACTCTCTCTGTC+CGG | 0.519848 | 2.4:-37236011 | MS.gene84406:intron |
| TCCGTGATTACAACGTACAT+TGG | 0.519948 | 2.4:-37234426 | MS.gene84406:CDS |
| TTGAGAAACTTCCCTGGCAG+AGG | 0.521457 | 2.4:+37235700 | None:intergenic |
| GTAGCGAATTTCGACCCGTT+AGG | 0.521598 | 2.4:-37235868 | MS.gene84406:CDS |
| GCTGCAGTAGCTTTGAATCC+AGG | 0.527425 | 2.4:-37233801 | MS.gene84406:CDS |
| AATGTAGCTGTACTTCTGCC+TGG | 0.528569 | 2.4:+37233375 | None:intergenic |
| GTTGTAAAGTCATTTACATA+GGG | 0.531063 | 2.4:+37234489 | None:intergenic |
| AAATTACTGACCTGAAACTT+GGG | 0.532762 | 2.4:-37234398 | MS.gene84406:CDS |
| GACACACCACCTGGGAGAAG+GGG | 0.533277 | 2.4:+37236101 | None:intergenic |
| GGTGGTGGTATTGGTAGACT+TGG | 0.533736 | 2.4:-37235553 | MS.gene84406:CDS |
| CTCAACCTCATCTCTCTACC+AGG | 0.538600 | 2.4:-37235975 | MS.gene84406:intron |
| CCCAATGTACGTTGTAATCA+CGG | 0.539847 | 2.4:+37234425 | None:intergenic |
| TCCAACTACCAACAGAAAGA+AGG | 0.539872 | 2.4:+37234254 | None:intergenic |
| GAAGAAGAGTTAATACCTAA+CGG | 0.545383 | 2.4:+37235853 | None:intergenic |
| CTTGGTGTGTATATACCTCT+AGG | 0.546349 | 2.4:-37235649 | MS.gene84406:CDS |
| CAGAAAGAAGGACACAATGA+TGG | 0.551543 | 2.4:+37234266 | None:intergenic |
| ACTGACCTGAAACTTGGGAA+TGG | 0.555203 | 2.4:-37234393 | MS.gene84406:CDS |
| ACAATCTGTGCATTGATGAA+AGG | 0.557062 | 2.4:+37235508 | None:intergenic |
| AATGTCCGACCAAAAGAAGC+TGG | 0.561861 | 2.4:+37234330 | None:intergenic |
| GGTAACAAGTCCGACATAGT+TGG | 0.563139 | 2.4:+37234287 | None:intergenic |
| GTTGAGTGGTAGATATTCTC+CGG | 0.567019 | 2.4:+37235992 | None:intergenic |
| TCTTCAGAAAAGAGAAGGTG+AGG | 0.569860 | 2.4:-37235446 | MS.gene84406:CDS |
| AAGAAGCTTCCCCTTCTCCC+AGG | 0.570059 | 2.4:-37236110 | MS.gene84406:intron |
| CAAGATCTTCAGAAAAGAGA+AGG | 0.570295 | 2.4:-37235451 | MS.gene84406:CDS |
| TCAATTCCACTTGTCAGACC+AGG | 0.572539 | 2.4:-37233393 | MS.gene84406:CDS |
| TTTAATGATGCCAACTATGT+CGG | 0.578808 | 2.4:-37234297 | MS.gene84406:CDS |
| GCACACTTGACTGCATTCCG+GGG | 0.581736 | 2.4:-37233140 | MS.gene84406:CDS |
| TAGATGTTCCAGCAAATCCC+CGG | 0.583086 | 2.4:+37233123 | None:intergenic |
| TCTTCAAAGGTCCTCTGCCA+GGG | 0.584956 | 2.4:-37235711 | MS.gene84406:CDS |
| CTTCTGCCTGGTCTGACAAG+TGG | 0.593403 | 2.4:+37233387 | None:intergenic |
| AGCGAACAATTGAAACGTCA+AGG | 0.598941 | 2.4:-37233420 | MS.gene84406:CDS |
| GTTTGTGAATATCAAAAGAG+AGG | 0.599776 | 2.4:+37234368 | None:intergenic |
| AGGGACGCAGGAAAAGAACT+TGG | 0.600736 | 2.4:+37234508 | None:intergenic |
| ATGAGAGGACCTTAAACGGT+AGG | 0.606091 | 2.4:+37234056 | None:intergenic |
| TAAATTTCTGACCTGTACAA+TGG | 0.607947 | 2.4:+37235372 | None:intergenic |
| TCTAGATTCACCAGCAAAAG+CGG | 0.612020 | 2.4:-37234100 | MS.gene84406:CDS |
| GTGAAACGTGCTAAAGTACC+AGG | 0.612842 | 2.4:+37233846 | None:intergenic |
| AAAAGCTTGAGAAACTTCCC+TGG | 0.613913 | 2.4:+37235694 | None:intergenic |
| TATTCTCCGGACAGAGAGAG+TGG | 0.622305 | 2.4:+37236005 | None:intergenic |
| GGTAGAGAGATGAGGTTGAG+TGG | 0.627551 | 2.4:+37235978 | None:intergenic |
| AAATGACTTTACAACAGAGT+GGG | 0.636424 | 2.4:-37234481 | MS.gene84406:CDS |
| TTGGCAGGTCAATAGTTCTG+GGG | 0.643969 | 2.4:-37233907 | MS.gene84406:intron |
| AGTCATTTACATAGGGACGC+AGG | 0.644501 | 2.4:+37234496 | None:intergenic |
| TAAATGACTTTACAACAGAG+TGG | 0.657979 | 2.4:-37234482 | MS.gene84406:CDS |
| GCTGCTACTCCTCCTCCTCG+AGG | 0.659044 | 2.4:+37235769 | None:intergenic |
| AGATTCACCAGCAAAAGCGG+TGG | 0.659232 | 2.4:-37234097 | MS.gene84406:CDS |
| CGTGATTACAACGTACATTG+GGG | 0.663302 | 2.4:-37234424 | MS.gene84406:CDS |
| GGTGTGTATATACCTCTAGG+TGG | 0.698321 | 2.4:-37235646 | MS.gene84406:CDS |
| GCAGTAGCTTTGAATCCAGG+AGG | 0.714613 | 2.4:-37233798 | MS.gene84406:intron |
| TCTCTGTTAACTCCACCTAG+AGG | 0.718674 | 2.4:+37235634 | None:intergenic |
| TCTAGGTGGAGTTAACAGAG+AGG | 0.738479 | 2.4:-37235632 | MS.gene84406:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATAAAATATAATATA+TGG | - | chr2.4:37235899-37235918 | MS.gene84406:intron | 0.0% |
| !! | AAAAATGTACATTTAAGTAA+AGG | + | chr2.4:37235611-37235630 | None:intergenic | 15.0% |
| !! | AAAATGTACATTTAAGTAAA+GGG | + | chr2.4:37235610-37235629 | None:intergenic | 15.0% |
| !! | ACAAAAACAAAATTATAAAC+TGG | + | chr2.4:37234590-37234609 | None:intergenic | 15.0% |
| !! | ATACAATTCATTTGAAAATT+AGG | + | chr2.4:37233246-37233265 | None:intergenic | 15.0% |
| !! | TTGATTTCAAAATTAATTCA+TGG | + | chr2.4:37234227-37234246 | None:intergenic | 15.0% |
| !!! | AAATGTACATTTTTTTTTGT+AGG | - | chr2.4:37235617-37235636 | MS.gene84406:CDS | 15.0% |
| !!! | ATGAATTAATTTTGAAATCA+AGG | - | chr2.4:37234226-37234245 | MS.gene84406:intron | 15.0% |
| !!! | CAATTTTATTATTATAAACC+CGG | + | chr2.4:37235391-37235410 | None:intergenic | 15.0% |
| !!! | TGAATTAATTTTGAAATCAA+GGG | - | chr2.4:37234227-37234246 | MS.gene84406:intron | 15.0% |
| !! | AAACTTTGAATAAATCATGA+AGG | + | chr2.4:37234051-37234070 | None:intergenic | 20.0% |
| !! | AGAAATGTTTGATGAAATAT+AGG | - | chr2.4:37235503-37235522 | MS.gene84406:CDS | 20.0% |
| !! | AGTAGAAAAAGATTTATGTT+AGG | - | chr2.4:37234179-37234198 | MS.gene84406:intron | 20.0% |
| !! | ATATTGTAATTACTGCATTT+AGG | - | chr2.4:37234306-37234325 | MS.gene84406:CDS | 20.0% |
| !! | ATTAAGTGATGTAAAATGAA+TGG | + | chr2.4:37235884-37235903 | None:intergenic | 20.0% |
| !! | ATTTGAAAATTAGGCAAAAA+TGG | + | chr2.4:37233237-37233256 | None:intergenic | 20.0% |
| !! | GTAGAAAAAGATTTATGTTA+GGG | - | chr2.4:37234180-37234199 | MS.gene84406:intron | 20.0% |
| !! | TAAAATATAATATATGGTGC+AGG | - | chr2.4:37235905-37235924 | MS.gene84406:intron | 20.0% |
| !! | TATTGTAATTACTGCATTTA+GGG | - | chr2.4:37234307-37234326 | MS.gene84406:CDS | 20.0% |
| !! | TATTTGAATTCATGAAGAAA+AGG | + | chr2.4:37233863-37233882 | None:intergenic | 20.0% |
| ! | AACATCTACATTGTCAAATT+TGG | + | chr2.4:37235213-37235232 | None:intergenic | 25.0% |
| ! | AAGTAAAGGGAATCAATTTA+TGG | + | chr2.4:37235597-37235616 | None:intergenic | 25.0% |
| ! | ACATCTATTCTTATTCTTGT+TGG | - | chr2.4:37236038-37236057 | MS.gene84406:intron | 25.0% |
| ! | AGTAATTACAATATAGAGGA+GGG | + | chr2.4:37234300-37234319 | None:intergenic | 25.0% |
| ! | ATGCAGTAATTACAATATAG+AGG | + | chr2.4:37234304-37234323 | None:intergenic | 25.0% |
| ! | ATTAATCAGTAAGGAAATCA+AGG | + | chr2.4:37235837-37235856 | None:intergenic | 25.0% |
| ! | CTTGTTGAGATAATGTTAAA+AGG | - | chr2.4:37234101-37234120 | MS.gene84406:CDS | 25.0% |
| ! | GATGATGTAGAAAATATGAT+AGG | + | chr2.4:37235269-37235288 | None:intergenic | 25.0% |
| ! | GTACTACAGTAACATAAAAA+AGG | + | chr2.4:37235125-37235144 | None:intergenic | 25.0% |
| ! | GTTGTAAAGTCATTTACATA+GGG | + | chr2.4:37234659-37234678 | None:intergenic | 25.0% |
| ! | TACAGTAACATAAAAAAGGT+TGG | + | chr2.4:37235121-37235140 | None:intergenic | 25.0% |
| ! | TATAACCAAGAGTCATTAAT+AGG | + | chr2.4:37234347-37234366 | None:intergenic | 25.0% |
| ! | TATCAAATACTATTCGAGTA+AGG | + | chr2.4:37235147-37235166 | None:intergenic | 25.0% |
| ! | TATGTTAAATGGAAGATAGA+AGG | + | chr2.4:37235645-37235664 | None:intergenic | 25.0% |
| ! | TGTTGTAAAGTCATTTACAT+AGG | + | chr2.4:37234660-37234679 | None:intergenic | 25.0% |
| !! | ACAATGTAGATGTTCTATTT+TGG | - | chr2.4:37235219-37235238 | MS.gene84406:intron | 25.0% |
| !! | GCTATCAAAAGTATGTTAAA+TGG | + | chr2.4:37235656-37235675 | None:intergenic | 25.0% |
| !! | TAACTTTAAAGAGTTACTCT+TGG | - | chr2.4:37234263-37234282 | MS.gene84406:CDS | 25.0% |
| !! | TGTTCTTCAATTTTCATTAC+AGG | - | chr2.4:37234607-37234626 | MS.gene84406:intron | 25.0% |
| !!! | TCTTATTCTTTGAGATTCAT+AGG | - | chr2.4:37234017-37234036 | MS.gene84406:intron | 25.0% |
| AAATGACTTTACAACAGAGT+GGG | - | chr2.4:37234664-37234683 | MS.gene84406:intron | 30.0% | |
| AAATTACTGACCTGAAACTT+GGG | - | chr2.4:37234747-37234766 | MS.gene84406:intron | 30.0% | |
| AACCAGCATATTAATCAGTA+AGG | + | chr2.4:37235846-37235865 | None:intergenic | 30.0% | |
| AAGAAGAGTTAATACCTAAC+GGG | + | chr2.4:37233294-37233313 | None:intergenic | 30.0% | |
| AGTGTAATAGTAGTTGAAGA+AGG | + | chr2.4:37235678-37235697 | None:intergenic | 30.0% | |
| ATCTACATTGTCAAATTTGG+AGG | + | chr2.4:37235210-37235229 | None:intergenic | 30.0% | |
| ATGGAAGAGACAAAAGTTTA+AGG | + | chr2.4:37235578-37235597 | None:intergenic | 30.0% | |
| ATTGAACGACTCCTATAATT+TGG | + | chr2.4:37233949-37233968 | None:intergenic | 30.0% | |
| ATTGTCCTATTAATGACTCT+TGG | - | chr2.4:37234339-37234358 | MS.gene84406:CDS | 30.0% | |
| CAAGTGAAAAATGTCTTCAT+AGG | - | chr2.4:37233885-37233904 | MS.gene84406:CDS | 30.0% | |
| CAGTAATTACAATATAGAGG+AGG | + | chr2.4:37234301-37234320 | None:intergenic | 30.0% | |
| GAAGAAGAAGAAGAAGAATA+TGG | + | chr2.4:37233100-37233119 | None:intergenic | 30.0% | |
| GAAGAAGAGTTAATACCTAA+CGG | + | chr2.4:37233295-37233314 | None:intergenic | 30.0% | |
| GCGACTAAATTACATATTGA+TGG | + | chr2.4:37234376-37234395 | None:intergenic | 30.0% | |
| GTTTGTGAATATCAAAAGAG+AGG | + | chr2.4:37234780-37234799 | None:intergenic | 30.0% | |
| TAAATGACTTTACAACAGAG+TGG | - | chr2.4:37234663-37234682 | MS.gene84406:intron | 30.0% | |
| TAAATTTCTGACCTGTACAA+TGG | + | chr2.4:37233776-37233795 | None:intergenic | 30.0% | |
| TCTGTTATCTTATTGACACT+TGG | - | chr2.4:37234695-37234714 | MS.gene84406:intron | 30.0% | |
| TCTTCATGAATGATTCGTAA+AGG | - | chr2.4:37233916-37233935 | MS.gene84406:intron | 30.0% | |
| TGAAATCAAGGGATATGATT+TGG | - | chr2.4:37234238-37234257 | MS.gene84406:intron | 30.0% | |
| TGGAAGAGACAAAAGTTTAA+GGG | + | chr2.4:37235577-37235596 | None:intergenic | 30.0% | |
| TTTAATGATGCCAACTATGT+CGG | - | chr2.4:37234848-37234867 | MS.gene84406:intron | 30.0% | |
| ! | AAGGTATCACACCAAATTAT+AGG | - | chr2.4:37233935-37233954 | MS.gene84406:intron | 30.0% |
| ! | CAATTTTCATTACAGGCTAT+TGG | - | chr2.4:37234614-37234633 | MS.gene84406:intron | 30.0% |
| ! | CTATTACACTTTTCTACAAC+TGG | - | chr2.4:37235688-37235707 | MS.gene84406:CDS | 30.0% |
| ! | GAAGAAGAAGAATATGGTTT+TGG | + | chr2.4:37233094-37233113 | None:intergenic | 30.0% |
| ! | GATGTTAAACCTTTTGCATT+TGG | - | chr2.4:37235441-37235460 | MS.gene84406:CDS | 30.0% |
| ! | TATGCTGGTTAAAGAACTAT+TGG | - | chr2.4:37235856-37235875 | MS.gene84406:CDS | 30.0% |
| ! | TTCCTTACTGATTAATATGC+TGG | - | chr2.4:37235841-37235860 | MS.gene84406:CDS | 30.0% |
| ! | TTCTTGGAAAGTGTAAATGA+GGG | - | chr2.4:37234427-37234446 | MS.gene84406:CDS | 30.0% |
| ! | TTTCTTGGAAAGTGTAAATG+AGG | - | chr2.4:37234426-37234445 | MS.gene84406:CDS | 30.0% |
| !! | ACTCTATGTTTTTGTACTTC+TGG | + | chr2.4:37236109-37236128 | None:intergenic | 30.0% |
| !! | ATCCATGCTTTTTAATAGCT+AGG | - | chr2.4:37234520-37234539 | MS.gene84406:intron | 30.0% |
| !! | CTCTATGTTTTTGTACTTCT+GGG | + | chr2.4:37236108-37236127 | None:intergenic | 30.0% |
| !! | GAGGATAGTTCAATTGATTT+TGG | - | chr2.4:37233406-37233425 | MS.gene84406:CDS | 30.0% |
| !!! | TTCAACATTTTTGGCAATCT+TGG | - | chr2.4:37235953-37235972 | MS.gene84406:intron | 30.0% |
| AAAGATGAGAGGACCTTAAA+CGG | + | chr2.4:37235096-37235115 | None:intergenic | 35.0% | |
| AAGGTTTAACATCGAATGTC+AGG | + | chr2.4:37235434-37235453 | None:intergenic | 35.0% | |
| AATCTAGACGCGTAGTTAAT+AGG | + | chr2.4:37235033-37235052 | None:intergenic | 35.0% | |
| AGTTGGAATTGTCTATGTTC+AGG | - | chr2.4:37234907-37234926 | MS.gene84406:intron | 35.0% | |
| ATATATGCCTTCAACCTCAA+AGG | + | chr2.4:37233976-37233995 | None:intergenic | 35.0% | |
| ATTGTTCTGCTTGAAATGTC+TGG | - | chr2.4:37235407-37235426 | MS.gene84406:CDS | 35.0% | |
| CAAATTACTGACCTGAAACT+TGG | - | chr2.4:37234746-37234765 | MS.gene84406:intron | 35.0% | |
| CAAGATCTTCAGAAAAGAGA+AGG | - | chr2.4:37233694-37233713 | MS.gene84406:intron | 35.0% | |
| CATCTTCTTCTTCTTCTACA+TGG | - | chr2.4:37233317-37233336 | MS.gene84406:intron | 35.0% | |
| CTTAGTCGAATATCAGTTCT+GGG | - | chr2.4:37235930-37235949 | MS.gene84406:intron | 35.0% | |
| GACCTAGCTATTAAAAAGCA+TGG | + | chr2.4:37234525-37234544 | None:intergenic | 35.0% | |
| TATATGCCTTCAACCTCAAA+GGG | + | chr2.4:37233975-37233994 | None:intergenic | 35.0% | |
| TCTTAGTCGAATATCAGTTC+TGG | - | chr2.4:37235929-37235948 | MS.gene84406:intron | 35.0% | |
| TGTGCACTAGGAAAACATAT+CGG | - | chr2.4:37234482-37234501 | MS.gene84406:CDS | 35.0% | |
| ! | ACAATCTGTGCATTGATGAA+AGG | + | chr2.4:37233640-37233659 | None:intergenic | 35.0% |
| ! | AGAGGCTTTTCTTGGAAATT+TGG | - | chr2.4:37233531-37233550 | MS.gene84406:intron | 35.0% |
| ! | GGAAGTTTCTCAAGCTTTTA+GGG | - | chr2.4:37233455-37233474 | MS.gene84406:CDS | 35.0% |
| ! | GTTGCAATACATTCTGGAAA+TGG | - | chr2.4:37235532-37235551 | MS.gene84406:CDS | 35.0% |
| ! | TTCTGAAGATCTTGCAACTT+GGG | + | chr2.4:37233688-37233707 | None:intergenic | 35.0% |
| ! | TTTCTGAAGATCTTGCAACT+TGG | + | chr2.4:37233689-37233708 | None:intergenic | 35.0% |
| !! | AAAGGTTGGTAAAAGATGAG+AGG | + | chr2.4:37235107-37235126 | None:intergenic | 35.0% |
| !! | CAGACAGATTTGATTTTACC+TGG | + | chr2.4:37233191-37233210 | None:intergenic | 35.0% |
| !! | GATTTTGGTGACTTCTTCAA+AGG | - | chr2.4:37233421-37233440 | MS.gene84406:CDS | 35.0% |
| !! | TGCTTTCAAGTTCTCTTTCT+TGG | - | chr2.4:37234411-37234430 | MS.gene84406:CDS | 35.0% |
| !!! | AGTTCTGGGTTCAACATTTT+TGG | - | chr2.4:37235944-37235963 | MS.gene84406:intron | 35.0% |
| !!! | GAATATGGTTTTGGTATGAG+AGG | + | chr2.4:37233085-37233104 | None:intergenic | 35.0% |
| !!! | TGTAGATGTTCTATTTTGGC+AGG | - | chr2.4:37235223-37235242 | MS.gene84406:intron | 35.0% |
| AAAAGCTTGAGAAACTTCCC+TGG | + | chr2.4:37233454-37233473 | None:intergenic | 40.0% | |
| AATTGTTCGCTCACATCATC+TGG | + | chr2.4:37235716-37235735 | None:intergenic | 40.0% | |
| AGCGAACAATTGAAACGTCA+AGG | - | chr2.4:37235725-37235744 | MS.gene84406:CDS | 40.0% | |
| AGGCATATATGCAGGTTCAT+AGG | - | chr2.4:37233986-37234005 | MS.gene84406:intron | 40.0% | |
| ATCTGCTTACCTACCGTTTA+AGG | - | chr2.4:37235080-37235099 | MS.gene84406:intron | 40.0% | |
| CAGAAAGAAGGACACAATGA+TGG | + | chr2.4:37234882-37234901 | None:intergenic | 40.0% | |
| CAGTGCTAGTATGTTTAGGA+AGG | - | chr2.4:37234156-37234175 | MS.gene84406:intron | 40.0% | |
| CATTGTGTCCTTCTTTCTGT+TGG | - | chr2.4:37234883-37234902 | MS.gene84406:intron | 40.0% | |
| CCAGAATGTATTGCAACAGA+AGG | + | chr2.4:37235529-37235548 | None:intergenic | 40.0% | |
| CCCAATGTACGTTGTAATCA+CGG | + | chr2.4:37234723-37234742 | None:intergenic | 40.0% | |
| CCGTGATTACAACGTACATT+GGG | - | chr2.4:37234720-37234739 | MS.gene84406:intron | 40.0% | |
| CCTTCTGTTGCAATACATTC+TGG | - | chr2.4:37235526-37235545 | MS.gene84406:CDS | 40.0% | |
| CGTGATTACAACGTACATTG+GGG | - | chr2.4:37234721-37234740 | MS.gene84406:intron | 40.0% | |
| CTTCCTAAACATACTAGCAC+TGG | + | chr2.4:37234158-37234177 | None:intergenic | 40.0% | |
| CTTCTTGTATTGTCAAGGCT+TGG | - | chr2.4:37233478-37233497 | MS.gene84406:CDS | 40.0% | |
| GTTGAGTGGTAGATATTCTC+CGG | + | chr2.4:37233156-37233175 | None:intergenic | 40.0% | |
| TACACTCGATATGCTTCTGT+TGG | - | chr2.4:37233745-37233764 | MS.gene84406:intron | 40.0% | |
| TAGGGCTTCTTGTATTGTCA+AGG | - | chr2.4:37233473-37233492 | MS.gene84406:CDS | 40.0% | |
| TATATGCAGGTTCATAGGTG+TGG | - | chr2.4:37233991-37234010 | MS.gene84406:intron | 40.0% | |
| TCACCAGTGCTAGTATGTTT+AGG | - | chr2.4:37234152-37234171 | MS.gene84406:intron | 40.0% | |
| TCCAACTACCAACAGAAAGA+AGG | + | chr2.4:37234894-37234913 | None:intergenic | 40.0% | |
| TCCGTGATTACAACGTACAT+TGG | - | chr2.4:37234719-37234738 | MS.gene84406:intron | 40.0% | |
| TCTAGATTCACCAGCAAAAG+CGG | - | chr2.4:37235045-37235064 | MS.gene84406:intron | 40.0% | |
| TCTTCAGAAAAGAGAAGGTG+AGG | - | chr2.4:37233699-37233718 | MS.gene84406:intron | 40.0% | |
| TGTGATGTAGTGTTAAGTGC+TGG | + | chr2.4:37234547-37234566 | None:intergenic | 40.0% | |
| TTGCAACACTGATGATTCTC+AGG | - | chr2.4:37234990-37235009 | MS.gene84406:intron | 40.0% | |
| TTTGGCAGGTCAATAGTTCT+GGG | - | chr2.4:37235237-37235256 | MS.gene84406:intron | 40.0% | |
| ! | AGAAGGGGAAGCTTCTTTTA+CGG | + | chr2.4:37233032-37233051 | None:intergenic | 40.0% |
| ! | CATAGAGCACCAAATGCAAA+AGG | + | chr2.4:37235453-37235472 | None:intergenic | 40.0% |
| ! | CTTGGTGTGTATATACCTCT+AGG | - | chr2.4:37233496-37233515 | MS.gene84406:CDS | 40.0% |
| ! | GGGAAGTTTCTCAAGCTTTT+AGG | - | chr2.4:37233454-37233473 | MS.gene84406:CDS | 40.0% |
| ! | GTTAACAGAGAGGCTTTTCT+TGG | - | chr2.4:37233523-37233542 | MS.gene84406:intron | 40.0% |
| ! | TCTTACTTGCCAGCTTCTTT+TGG | - | chr2.4:37234806-37234825 | MS.gene84406:intron | 40.0% |
| ! | TTTTACCTGGTAGAGAGATG+AGG | + | chr2.4:37233178-37233197 | None:intergenic | 40.0% |
| ! | TTTTGGCAGGTCAATAGTTC+TGG | - | chr2.4:37235236-37235255 | MS.gene84406:intron | 40.0% |
| !! | AATTAGCCCTTTGAGGTTGA+AGG | - | chr2.4:37233966-37233985 | MS.gene84406:intron | 40.0% |
| !! | GTATGTGGTTGGTTTATCTC+CGG | - | chr2.4:37235369-37235388 | MS.gene84406:intron | 40.0% |
| !! | TATGTGGTTGGTTTATCTCC+GGG | - | chr2.4:37235370-37235389 | MS.gene84406:intron | 40.0% |
| !! | TCCTTCTTTCTGTTGGTAGT+TGG | - | chr2.4:37234890-37234909 | MS.gene84406:intron | 40.0% |
| AATGTAGCTGTACTTCTGCC+TGG | + | chr2.4:37235773-37235792 | None:intergenic | 45.0% | |
| AATGTCCGACCAAAAGAAGC+TGG | + | chr2.4:37234818-37234837 | None:intergenic | 45.0% | |
| ACCAATACCACCACCAGAAA+AGG | + | chr2.4:37233587-37233606 | None:intergenic | 45.0% | |
| ACTGACCTGAAACTTGGGAA+TGG | - | chr2.4:37234752-37234771 | MS.gene84406:intron | 45.0% | |
| AGACTTGGCATATGCTCTCT+TGG | - | chr2.4:37233607-37233626 | MS.gene84406:intron | 45.0% | |
| AGGTTCCATTCCCAAGTTTC+AGG | + | chr2.4:37234760-37234779 | None:intergenic | 45.0% | |
| AGTAAGGAAATCAAGGAGCG+TGG | + | chr2.4:37235830-37235849 | None:intergenic | 45.0% | |
| AGTCATTTACATAGGGACGC+AGG | + | chr2.4:37234652-37234671 | None:intergenic | 45.0% | |
| ATGAGAGGACCTTAAACGGT+AGG | + | chr2.4:37235092-37235111 | None:intergenic | 45.0% | |
| GGTAACAAGTCCGACATAGT+TGG | + | chr2.4:37234861-37234880 | None:intergenic | 45.0% | |
| GGTACTTTAGCACGTTTCAC+TGG | - | chr2.4:37235302-37235321 | MS.gene84406:intron | 45.0% | |
| GGTGTGTATATACCTCTAGG+TGG | - | chr2.4:37233499-37233518 | MS.gene84406:CDS | 45.0% | |
| GTCGTTCAATTAGCCCTTTG+AGG | - | chr2.4:37233959-37233978 | MS.gene84406:intron | 45.0% | |
| TAAACCAACCACATACCTCC+TGG | + | chr2.4:37235365-37235384 | None:intergenic | 45.0% | |
| TAGATGTTCCAGCAAATCCC+CGG | + | chr2.4:37236025-37236044 | None:intergenic | 45.0% | |
| TCAATTCCACTTGTCAGACC+AGG | - | chr2.4:37235752-37235771 | MS.gene84406:CDS | 45.0% | |
| TCTAGGTGGAGTTAACAGAG+AGG | - | chr2.4:37233513-37233532 | MS.gene84406:intron | 45.0% | |
| TCTCTGTTAACTCCACCTAG+AGG | + | chr2.4:37233514-37233533 | None:intergenic | 45.0% | |
| TGAGAGGACGATTATTCAGC+CGG | + | chr2.4:37233069-37233088 | None:intergenic | 45.0% | |
| TGTTGGATTCGCCATTGTAC+AGG | - | chr2.4:37233762-37233781 | MS.gene84406:intron | 45.0% | |
| ! | ACATCATCGTTAGCTCTTCC+TGG | - | chr2.4:37235281-37235300 | MS.gene84406:intron | 45.0% |
| ! | ACTCTAGACTCCTTTTCTGG+TGG | - | chr2.4:37233574-37233593 | MS.gene84406:intron | 45.0% |
| ! | ACTTGCCAGCTTCTTTTGGT+CGG | - | chr2.4:37234810-37234829 | MS.gene84406:intron | 45.0% |
| ! | AGCACTCTAGACTCCTTTTC+TGG | - | chr2.4:37233571-37233590 | MS.gene84406:intron | 45.0% |
| ! | CTTTGAATCCAGGAGGTATG+TGG | - | chr2.4:37235354-37235373 | MS.gene84406:intron | 45.0% |
| ! | GAGGTTGAAGGCATATATGC+AGG | - | chr2.4:37233978-37233997 | MS.gene84406:intron | 45.0% |
| ! | GTAAGGAAATCAAGGAGCGT+GGG | + | chr2.4:37235829-37235848 | None:intergenic | 45.0% |
| ! | GTGAAACGTGCTAAAGTACC+AGG | + | chr2.4:37235302-37235321 | None:intergenic | 45.0% |
| ! | GTTTTCCTAGTGCACAACAG+TGG | + | chr2.4:37234478-37234497 | None:intergenic | 45.0% |
| ! | TAAGGAAATCAAGGAGCGTG+GGG | + | chr2.4:37235828-37235847 | None:intergenic | 45.0% |
| ! | TTGGCAGGTCAATAGTTCTG+GGG | - | chr2.4:37235238-37235257 | MS.gene84406:intron | 45.0% |
| !! | ACATACTAGCACTGGTGAGA+CGG | + | chr2.4:37234150-37234169 | None:intergenic | 45.0% |
| !! | TTTTTGGCAATCTTGGCTGC+TGG | - | chr2.4:37235960-37235979 | MS.gene84406:intron | 45.0% |
| !!! | TCCTTTTCTGGTGGTGGTAT+TGG | - | chr2.4:37233583-37233602 | MS.gene84406:intron | 45.0% |
| AGATTCACCAGCAAAAGCGG+TGG | - | chr2.4:37235048-37235067 | MS.gene84406:intron | 50.0% | |
| AGCTCAGAAAAACCTCGAGG+AGG | - | chr2.4:37233364-37233383 | MS.gene84406:intron | 50.0% | |
| AGGAGTAGCAGCTGCAATAG+AGG | - | chr2.4:37233387-37233406 | MS.gene84406:CDS | 50.0% | |
| AGGGACGCAGGAAAAGAACT+TGG | + | chr2.4:37234640-37234659 | None:intergenic | 50.0% | |
| CAGAAAAGAGAAGGTGAGGC+TGG | - | chr2.4:37233703-37233722 | MS.gene84406:intron | 50.0% | |
| CTCAACCACTGTTGTGCACT+AGG | - | chr2.4:37234470-37234489 | MS.gene84406:CDS | 50.0% | |
| CTCAACCTCATCTCTCTACC+AGG | - | chr2.4:37233170-37233189 | MS.gene84406:CDS | 50.0% | |
| CTGCACACTTGACTGCATTC+CGG | - | chr2.4:37236003-37236022 | MS.gene84406:CDS | 50.0% | |
| GAGAGCTCAGAAAAACCTCG+AGG | - | chr2.4:37233361-37233380 | MS.gene84406:intron | 50.0% | |
| GCAGTCTGCTCAACAATTGC+AGG | + | chr2.4:37235987-37236006 | None:intergenic | 50.0% | |
| GGTAGAGAGATGAGGTTGAG+TGG | + | chr2.4:37233170-37233189 | None:intergenic | 50.0% | |
| GTAGCGAATTTCGACCCGTT+AGG | - | chr2.4:37233277-37233296 | MS.gene84406:intron | 50.0% | |
| TATTCTCCGGACAGAGAGAG+TGG | + | chr2.4:37233143-37233162 | None:intergenic | 50.0% | |
| TCAGAAAAACCTCGAGGAGG+AGG | - | chr2.4:37233367-37233386 | MS.gene84406:CDS | 50.0% | |
| TCTTCAAAGGTCCTCTGCCA+GGG | - | chr2.4:37233434-37233453 | MS.gene84406:CDS | 50.0% | |
| TGCACACTTGACTGCATTCC+GGG | - | chr2.4:37236004-37236023 | MS.gene84406:CDS | 50.0% | |
| TTCTTCAAAGGTCCTCTGCC+AGG | - | chr2.4:37233433-37233452 | MS.gene84406:CDS | 50.0% | |
| TTGAGAAACTTCCCTGGCAG+AGG | + | chr2.4:37233448-37233467 | None:intergenic | 50.0% | |
| ! | GAATCCAGGAGGTATGTGGT+TGG | - | chr2.4:37235358-37235377 | MS.gene84406:intron | 50.0% |
| !! | CTAGACTCCTTTTCTGGTGG+TGG | - | chr2.4:37233577-37233596 | MS.gene84406:intron | 50.0% |
| !! | GCAGTAGCTTTGAATCCAGG+AGG | - | chr2.4:37235347-37235366 | MS.gene84406:intron | 50.0% |
| !! | GCTGCAGTAGCTTTGAATCC+AGG | - | chr2.4:37235344-37235363 | MS.gene84406:intron | 50.0% |
| !! | GGTGGTGGTATTGGTAGACT+TGG | - | chr2.4:37233592-37233611 | MS.gene84406:intron | 50.0% |
| !! | TTCAAGTCCACCGCTTTTGC+TGG | + | chr2.4:37235058-37235077 | None:intergenic | 50.0% |
| AAGAAGCTTCCCCTTCTCCC+AGG | - | chr2.4:37233035-37233054 | MS.gene84406:CDS | 55.0% | |
| ACTGCATTCCGGGGATTTGC+TGG | - | chr2.4:37236014-37236033 | MS.gene84406:intron | 55.0% | |
| CTTCTGCCTGGTCTGACAAG+TGG | + | chr2.4:37235761-37235780 | None:intergenic | 55.0% | |
| GCACACTTGACTGCATTCCG+GGG | - | chr2.4:37236005-37236024 | MS.gene84406:CDS | 55.0% | |
| AAGCTTCCCCTTCTCCCAGG+TGG | - | chr2.4:37233038-37233057 | MS.gene84406:CDS | 60.0% | |
| ATTCAGCCGGACACACCACC+TGG | + | chr2.4:37233056-37233075 | None:intergenic | 60.0% | |
| CTTCTCCCAGGTGGTGTGTC+CGG | - | chr2.4:37233047-37233066 | MS.gene84406:CDS | 60.0% | |
| GACACACCACCTGGGAGAAG+GGG | + | chr2.4:37233047-37233066 | None:intergenic | 60.0% | |
| GCAGAGCCACTCTCTCTGTC+CGG | - | chr2.4:37233134-37233153 | MS.gene84406:CDS | 60.0% | |
| GGACACACCACCTGGGAGAA+GGG | + | chr2.4:37233048-37233067 | None:intergenic | 60.0% | |
| TTCAGCCGGACACACCACCT+GGG | + | chr2.4:37233055-37233074 | None:intergenic | 60.0% | |
| CGGACACACCACCTGGGAGA+AGG | + | chr2.4:37233049-37233068 | None:intergenic | 65.0% | |
| GCTGCTACTCCTCCTCCTCG+AGG | + | chr2.4:37233379-37233398 | None:intergenic | 65.0% | |
| GGAGCGTGGGGCTAGAGAGA+AGG | + | chr2.4:37235816-37235835 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 37233016 | 37236151 | 37233016 | ID=MS.gene84406 |
| chr2.4 | mRNA | 37233016 | 37236151 | 37233016 | ID=MS.gene84406.t1;Parent=MS.gene84406 |
| chr2.4 | exon | 37236111 | 37236151 | 37236111 | ID=MS.gene84406.t1.exon1;Parent=MS.gene84406.t1 |
| chr2.4 | CDS | 37236111 | 37236151 | 37236111 | ID=cds.MS.gene84406.t1;Parent=MS.gene84406.t1 |
| chr2.4 | exon | 37235976 | 37236029 | 37235976 | ID=MS.gene84406.t1.exon2;Parent=MS.gene84406.t1 |
| chr2.4 | CDS | 37235976 | 37236029 | 37235976 | ID=cds.MS.gene84406.t1;Parent=MS.gene84406.t1 |
| chr2.4 | exon | 37235384 | 37235897 | 37235384 | ID=MS.gene84406.t1.exon3;Parent=MS.gene84406.t1 |
| chr2.4 | CDS | 37235384 | 37235897 | 37235384 | ID=cds.MS.gene84406.t1;Parent=MS.gene84406.t1 |
| chr2.4 | exon | 37234239 | 37234538 | 37234239 | ID=MS.gene84406.t1.exon4;Parent=MS.gene84406.t1 |
| chr2.4 | CDS | 37234239 | 37234538 | 37234239 | ID=cds.MS.gene84406.t1;Parent=MS.gene84406.t1 |
| chr2.4 | exon | 37234066 | 37234155 | 37234066 | ID=MS.gene84406.t1.exon5;Parent=MS.gene84406.t1 |
| chr2.4 | CDS | 37234066 | 37234155 | 37234066 | ID=cds.MS.gene84406.t1;Parent=MS.gene84406.t1 |
| chr2.4 | exon | 37233799 | 37233922 | 37233799 | ID=MS.gene84406.t1.exon6;Parent=MS.gene84406.t1 |
| chr2.4 | CDS | 37233799 | 37233922 | 37233799 | ID=cds.MS.gene84406.t1;Parent=MS.gene84406.t1 |
| chr2.4 | exon | 37233365 | 37233528 | 37233365 | ID=MS.gene84406.t1.exon7;Parent=MS.gene84406.t1 |
| chr2.4 | CDS | 37233365 | 37233528 | 37233365 | ID=cds.MS.gene84406.t1;Parent=MS.gene84406.t1 |
| chr2.4 | exon | 37233016 | 37233240 | 37233016 | ID=MS.gene84406.t1.exon8;Parent=MS.gene84406.t1 |
| chr2.4 | CDS | 37233016 | 37233240 | 37233016 | ID=cds.MS.gene84406.t1;Parent=MS.gene84406.t1 |
| Gene Sequence |
| Protein sequence |
