Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004643.01.T01 | AES61445.2 | 89.958 | 239 | 4 | 1 | 1 | 239 | 1 | 219 | 9.16E-153 | 433 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004643.01.T01 | Q84J70 | 56.612 | 242 | 83 | 4 | 1 | 239 | 1 | 223 | 5.64E-87 | 260 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004643.01.T01 | G7I9F4 | 89.958 | 239 | 4 | 1 | 1 | 239 | 1 | 219 | 4.38e-153 | 433 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048887.01 | MsG0180004643.01 | -0.802800 | 4.723121e-49 | 2.335156e-46 |
| MsG0080049024.01 | MsG0180004643.01 | -0.837986 | 3.759812e-57 | 4.967387e-54 |
| MsG0180000183.01 | MsG0180004643.01 | 0.806138 | 9.514112e-50 | 5.124700e-47 |
| MsG0180000367.01 | MsG0180004643.01 | 0.802129 | 6.494821e-49 | 3.156515e-46 |
| MsG0180000423.01 | MsG0180004643.01 | -0.834085 | 3.675521e-56 | 4.315668e-53 |
| MsG0180000556.01 | MsG0180004643.01 | 0.801440 | 8.994083e-49 | 4.295503e-46 |
| MsG0180001513.01 | MsG0180004643.01 | 0.800204 | 1.608504e-48 | 7.445110e-46 |
| MsG0180001614.01 | MsG0180004643.01 | -0.812391 | 4.340297e-51 | 2.756278e-48 |
| MsG0180002006.01 | MsG0180004643.01 | 0.839645 | 1.400177e-57 | 1.945811e-54 |
| MsG0180002809.01 | MsG0180004643.01 | -0.809437 | 1.893469e-50 | 1.111664e-47 |
| MsG0180003114.01 | MsG0180004643.01 | -0.815462 | 9.132281e-52 | 6.300655e-49 |
| MsG0180003249.01 | MsG0180004643.01 | 0.800252 | 1.572730e-48 | 7.288569e-46 |
| MsG0180003351.01 | MsG0180004643.01 | -0.812763 | 3.599759e-51 | 2.308389e-48 |
| MsG0180003758.01 | MsG0180004643.01 | -0.827164 | 1.820143e-54 | 1.743183e-51 |
| MsG0180004322.01 | MsG0180004643.01 | -0.805235 | 1.472372e-49 | 7.749027e-47 |
| MsG0180004553.01 | MsG0180004643.01 | -0.803693 | 3.085600e-49 | 1.560792e-46 |
| MsG0180004580.01 | MsG0180004643.01 | -0.801486 | 8.803761e-49 | 4.209430e-46 |
| MsG0180004581.01 | MsG0180004643.01 | -0.815219 | 1.034254e-51 | 7.087383e-49 |
| MsG0180004643.01 | MsG0180004757.01 | 0.813657 | 2.290800e-51 | 1.504906e-48 |
| MsG0180004643.01 | MsG0280006381.01 | -0.804327 | 2.278336e-49 | 1.171352e-46 |
| MsG0180004643.01 | MsG0280007017.01 | -0.812811 | 3.513943e-51 | 2.256056e-48 |
| MsG0180004643.01 | MsG0280007201.01 | 0.801653 | 8.134040e-49 | 3.905595e-46 |
| MsG0180004643.01 | MsG0280007216.01 | 0.813845 | 2.082861e-51 | 1.375234e-48 |
| MsG0180004643.01 | MsG0280007418.01 | -0.805687 | 1.183473e-49 | 6.301719e-47 |
| MsG0180004643.01 | MsG0280007426.01 | 0.807413 | 5.117391e-50 | 2.848513e-47 |
| MsG0180004643.01 | MsG0280007653.01 | -0.817930 | 2.553460e-52 | 1.884882e-49 |
| MsG0180004643.01 | MsG0280007786.01 | 0.804038 | 2.616305e-49 | 1.335222e-46 |
| MsG0180004643.01 | MsG0280009079.01 | -0.808835 | 2.547443e-50 | 1.471719e-47 |
| MsG0180004643.01 | MsG0280009094.01 | -0.810973 | 8.832841e-51 | 5.401392e-48 |
| MsG0180004643.01 | MsG0280009167.01 | 0.809964 | 1.458390e-50 | 8.682765e-48 |
| MsG0180004643.01 | MsG0280009287.01 | -0.800280 | 1.551765e-48 | 7.196676e-46 |
| MsG0180004643.01 | MsG0280009445.01 | -0.823341 | 1.459310e-53 | 1.252996e-50 |
| MsG0180004643.01 | MsG0280010149.01 | -0.823509 | 1.332854e-53 | 1.149965e-50 |
| MsG0180004643.01 | MsG0280010584.01 | -0.807885 | 4.062167e-50 | 2.288971e-47 |
| MsG0180004643.01 | MsG0280011017.01 | 0.843375 | 1.456347e-58 | 2.274281e-55 |
| MsG0180004643.01 | MsG0280011281.01 | -0.812444 | 4.226329e-51 | 2.687795e-48 |
| MsG0180004643.01 | MsG0280011475.01 | -0.805812 | 1.114218e-49 | 5.951821e-47 |
| MsG0180004643.01 | MsG0380012065.01 | -0.800483 | 1.411016e-48 | 6.577465e-46 |
| MsG0180004643.01 | MsG0380013272.01 | 0.816623 | 5.026603e-52 | 3.579799e-49 |
| MsG0180004643.01 | MsG0380014231.01 | -0.803372 | 3.596942e-49 | 1.804427e-46 |
| MsG0180004643.01 | MsG0380014642.01 | -0.801226 | 9.952552e-49 | 4.727587e-46 |
| MsG0180004643.01 | MsG0380015271.01 | -0.833026 | 6.753552e-56 | 7.682790e-53 |
| MsG0180004643.01 | MsG0380015369.01 | 0.833773 | 4.397771e-56 | 5.115889e-53 |
| MsG0180004643.01 | MsG0380015619.01 | -0.809605 | 1.741882e-50 | 1.027332e-47 |
| MsG0180004643.01 | MsG0380015719.01 | -0.819081 | 1.400302e-52 | 1.066952e-49 |
| MsG0180004643.01 | MsG0380016354.01 | -0.800835 | 1.196355e-48 | 5.626883e-46 |
| MsG0180004643.01 | MsG0380016456.01 | -0.824643 | 7.223733e-54 | 6.437070e-51 |
| MsG0180004643.01 | MsG0380016700.01 | 0.802421 | 5.654362e-49 | 2.768746e-46 |
| MsG0180004643.01 | MsG0380016839.01 | 0.805969 | 1.032470e-49 | 5.537515e-47 |
| MsG0180004643.01 | MsG0380016934.01 | -0.830729 | 2.492513e-55 | 2.648679e-52 |
| MsG0180004643.01 | MsG0380016935.01 | -0.828910 | 6.911604e-55 | 6.964337e-52 |
| MsG0180004643.01 | MsG0380016960.01 | -0.812392 | 4.338838e-51 | 2.755426e-48 |
| MsG0180004643.01 | MsG0380016993.01 | 0.824223 | 9.069658e-54 | 7.984123e-51 |
| MsG0180004643.01 | MsG0380017405.01 | -0.806811 | 6.862996e-50 | 3.760898e-47 |
| MsG0180004643.01 | MsG0380017928.01 | -0.825951 | 3.543005e-54 | 3.277095e-51 |
| MsG0180004643.01 | MsG0480018201.01 | -0.808052 | 3.742110e-50 | 2.117991e-47 |
| MsG0180004643.01 | MsG0480018202.01 | -0.836870 | 7.261815e-57 | 9.271386e-54 |
| MsG0180004643.01 | MsG0480018203.01 | -0.829131 | 6.111913e-55 | 6.199249e-52 |
| MsG0180004643.01 | MsG0480018406.01 | 0.800832 | 1.197491e-48 | 5.631957e-46 |
| MsG0180004643.01 | MsG0480018440.01 | 0.806866 | 6.680369e-50 | 3.666062e-47 |
| MsG0180004643.01 | MsG0480018629.01 | -0.804731 | 1.876308e-49 | 9.748486e-47 |
| MsG0180004643.01 | MsG0480019017.01 | 0.839932 | 1.178748e-57 | 1.652902e-54 |
| MsG0180004643.01 | MsG0480020960.01 | 0.804704 | 1.901468e-49 | 9.871419e-47 |
| MsG0180004643.01 | MsG0480021308.01 | -0.815130 | 1.082310e-51 | 7.398920e-49 |
| MsG0180004643.01 | MsG0480022638.01 | 0.812434 | 4.248312e-51 | 2.701040e-48 |
| MsG0180004643.01 | MsG0480022687.01 | -0.801022 | 1.095279e-48 | 5.176366e-46 |
| MsG0180004643.01 | MsG0480023067.01 | 0.824757 | 6.790699e-54 | 6.071016e-51 |
| MsG0180004643.01 | MsG0480023103.01 | -0.803448 | 3.469568e-49 | 1.743983e-46 |
| MsG0180004643.01 | MsG0480023152.01 | -0.803197 | 3.910046e-49 | 1.952779e-46 |
| MsG0180004643.01 | MsG0480023695.01 | -0.811482 | 6.848649e-51 | 4.244355e-48 |
| MsG0180004643.01 | MsG0480023850.01 | -0.801059 | 1.076611e-48 | 5.092820e-46 |
| MsG0180004643.01 | MsG0480023987.01 | 0.820865 | 5.472486e-53 | 4.382008e-50 |
| MsG0180004643.01 | MsG0580024408.01 | 0.801165 | 1.024014e-48 | 4.856860e-46 |
| MsG0180004643.01 | MsG0580024442.01 | -0.815901 | 7.289889e-52 | 5.089941e-49 |
| MsG0180004643.01 | MsG0580024493.01 | -0.809616 | 1.733170e-50 | 1.022504e-47 |
| MsG0180004643.01 | MsG0580025105.01 | -0.807688 | 4.472166e-50 | 2.507151e-47 |
| MsG0180004643.01 | MsG0580025317.01 | -0.813787 | 2.144983e-51 | 1.414051e-48 |
| MsG0180004643.01 | MsG0580025447.01 | -0.815592 | 8.544807e-52 | 5.916130e-49 |
| MsG0180004643.01 | MsG0580025486.01 | -0.815094 | 1.102353e-51 | 7.528531e-49 |
| MsG0180004643.01 | MsG0580026362.01 | -0.811248 | 7.698091e-51 | 4.741328e-48 |
| MsG0180004643.01 | MsG0580027325.01 | -0.824948 | 6.120075e-54 | 5.501315e-51 |
| MsG0180004643.01 | MsG0580027646.01 | 0.804294 | 2.314399e-49 | 1.188911e-46 |
| MsG0180004643.01 | MsG0580029918.01 | -0.803803 | 2.927870e-49 | 1.485196e-46 |
| MsG0180004643.01 | MsG0580030014.01 | -0.825859 | 3.725678e-54 | 3.437107e-51 |
| MsG0180004643.01 | MsG0680030635.01 | -0.814040 | 1.886339e-51 | 1.252144e-48 |
| MsG0180004643.01 | MsG0680030878.01 | -0.822889 | 1.860530e-53 | 1.577332e-50 |
| MsG0180004643.01 | MsG0680030902.01 | -0.800682 | 1.285169e-48 | 6.021131e-46 |
| MsG0180004643.01 | MsG0680031804.01 | 0.829349 | 5.411412e-55 | 5.524693e-52 |
| MsG0180004643.01 | MsG0680033754.01 | 0.827086 | 1.900187e-54 | 1.815720e-51 |
| MsG0180004643.01 | MsG0780035994.01 | -0.806447 | 8.191328e-50 | 4.447026e-47 |
| MsG0180004643.01 | MsG0780036661.01 | 0.803996 | 2.670240e-49 | 1.361288e-46 |
| MsG0180004643.01 | MsG0780038848.01 | -0.819314 | 1.239268e-52 | 9.502851e-50 |
| MsG0180004643.01 | MsG0780038860.01 | 0.808378 | 3.190142e-50 | 1.821233e-47 |
| MsG0180004643.01 | MsG0780038922.01 | 0.800182 | 1.624744e-48 | 7.516211e-46 |
| MsG0180004643.01 | MsG0780039287.01 | -0.826041 | 3.372020e-54 | 3.126813e-51 |
| MsG0180004643.01 | MsG0780039431.01 | 0.812250 | 4.658890e-51 | 2.947411e-48 |
| MsG0180004643.01 | MsG0780039839.01 | -0.807588 | 4.698018e-50 | 2.626744e-47 |
| MsG0180004643.01 | MsG0780039902.01 | -0.811900 | 5.555045e-51 | 3.480780e-48 |
| MsG0180004643.01 | MsG0780040685.01 | -0.805372 | 1.377860e-49 | 7.277263e-47 |
| MsG0180004643.01 | MsG0780040805.01 | 0.807383 | 5.192436e-50 | 2.887997e-47 |
| MsG0180004643.01 | MsG0780040892.01 | -0.843400 | 1.433973e-58 | 2.241163e-55 |
| MsG0180004643.01 | MsG0780040977.01 | 0.823360 | 1.444784e-53 | 1.241129e-50 |
| MsG0180004643.01 | MsG0780041060.01 | 0.861178 | 1.231623e-63 | 3.453660e-60 |
| MsG0180004643.01 | MsG0780041075.01 | -0.804515 | 2.082122e-49 | 1.075605e-46 |
| MsG0180004643.01 | MsG0780041119.01 | 0.816677 | 4.888057e-52 | 3.486230e-49 |
| MsG0180004643.01 | MsG0780041663.01 | 0.824680 | 7.079809e-54 | 6.315641e-51 |
| MsG0180004643.01 | MsG0880041835.01 | -0.829011 | 6.533955e-55 | 6.603440e-52 |
| MsG0180004643.01 | MsG0880041908.01 | -0.823472 | 1.360309e-53 | 1.172355e-50 |
| MsG0180004643.01 | MsG0880042694.01 | 0.812280 | 4.589027e-51 | 2.905544e-48 |
| MsG0180004643.01 | MsG0880043017.01 | 0.802252 | 6.127740e-49 | 2.987524e-46 |
| MsG0180004643.01 | MsG0880043343.01 | -0.805064 | 1.598678e-49 | 8.377088e-47 |
| MsG0180004643.01 | MsG0880043364.01 | 0.803579 | 3.259257e-49 | 1.643892e-46 |
| MsG0180004643.01 | MsG0880045369.01 | -0.811563 | 6.577935e-51 | 4.085171e-48 |
| MsG0180004643.01 | MsG0880045385.01 | -0.815779 | 7.760477e-52 | 5.401158e-49 |
| MsG0180004643.01 | MsG0880045458.01 | 0.803025 | 4.243382e-49 | 2.109857e-46 |
| MsG0180004643.01 | MsG0880045703.01 | -0.827357 | 1.635611e-54 | 1.575530e-51 |
| MsG0180004643.01 | MsG0880045968.01 | -0.844520 | 7.185424e-59 | 1.163045e-55 |
| MsG0180004643.01 | MsG0880046010.01 | -0.820378 | 7.081712e-53 | 5.594346e-50 |
| MsG0180004643.01 | MsG0880046092.01 | 0.803562 | 3.285015e-49 | 1.656186e-46 |
| MsG0180004643.01 | MsG0880046151.01 | -0.800827 | 1.200612e-48 | 5.645678e-46 |
| MsG0180004643.01 | MsG0880046158.01 | 0.814550 | 1.455187e-51 | 9.793968e-49 |
| MsG0180004643.01 | MsG0880046759.01 | -0.802451 | 5.575704e-49 | 2.732156e-46 |
| MsG0180004643.01 | MsG0880046863.01 | 0.874328 | 7.361659e-68 | 3.299920e-64 |
| MsG0180004643.01 | MsG0880046876.01 | -0.819191 | 1.321762e-52 | 1.010159e-49 |
| MsG0180004643.01 | MsG0880047318.01 | -0.801554 | 8.525421e-49 | 4.083309e-46 |
| MsG0180004643.01 | MsG0880047493.01 | 0.809862 | 1.534323e-50 | 9.110071e-48 |
| MsG0180004643.01 | MsG0880047568.01 | 0.822710 | 2.047760e-53 | 1.727308e-50 |
| MsG0180004643.01 | MsG0880047697.01 | 0.801877 | 7.319086e-49 | 3.534537e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004643.01.T01 | MTR_1g083780 | 89.958 | 239 | 4 | 1 | 1 | 239 | 1 | 219 | 1.11e-156 | 433 |
| MsG0180004643.01.T01 | MTR_2g035070 | 49.776 | 223 | 90 | 9 | 24 | 239 | 20 | 227 | 6.05e-57 | 181 |
| MsG0180004643.01.T01 | MTR_7g112403 | 73.984 | 123 | 30 | 1 | 119 | 239 | 1 | 123 | 1.27e-54 | 171 |
| MsG0180004643.01.T01 | MTR_7g112400 | 64.602 | 113 | 23 | 4 | 1 | 96 | 1 | 113 | 3.38e-42 | 140 |
| MsG0180004643.01.T01 | MTR_7g109145 | 34.348 | 230 | 106 | 5 | 14 | 239 | 5 | 193 | 4.73e-28 | 105 |
| MsG0180004643.01.T01 | MTR_7g109145 | 37.278 | 169 | 80 | 4 | 75 | 239 | 3 | 149 | 5.89e-21 | 86.3 |
| MsG0180004643.01.T01 | MTR_7g109145 | 35.583 | 163 | 79 | 4 | 81 | 239 | 1 | 141 | 1.94e-15 | 71.2 |
| MsG0180004643.01.T01 | MTR_4g104770 | 27.193 | 228 | 124 | 7 | 15 | 238 | 11 | 200 | 1.15e-13 | 67.8 |
| MsG0180004643.01.T01 | MTR_4g088430 | 42.029 | 69 | 34 | 2 | 7 | 71 | 6 | 72 | 8.04e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004643.01.T01 | AT3G05700 | 56.612 | 242 | 83 | 4 | 1 | 239 | 1 | 223 | 5.75e-88 | 260 |
| MsG0180004643.01.T01 | AT5G26990 | 52.282 | 241 | 94 | 4 | 1 | 239 | 1 | 222 | 6.51e-79 | 237 |
| MsG0180004643.01.T01 | AT3G05700 | 58.173 | 208 | 65 | 4 | 1 | 205 | 1 | 189 | 3.23e-77 | 232 |
| MsG0180004643.01.T01 | AT1G56280 | 49.561 | 228 | 85 | 4 | 11 | 237 | 1 | 199 | 4.88e-66 | 203 |
| MsG0180004643.01.T01 | AT1G56280 | 50.000 | 212 | 75 | 5 | 27 | 237 | 24 | 205 | 2.68e-58 | 184 |
| MsG0180004643.01.T01 | AT5G49230 | 45.972 | 211 | 86 | 6 | 27 | 237 | 27 | 209 | 6.18e-54 | 173 |
| MsG0180004643.01.T01 | AT3G06760 | 47.465 | 217 | 91 | 5 | 27 | 239 | 27 | 224 | 7.09e-53 | 171 |
| MsG0180004643.01.T01 | AT5G49230 | 45.024 | 211 | 83 | 5 | 27 | 237 | 27 | 204 | 8.72e-53 | 170 |
| MsG0180004643.01.T01 | AT3G06760 | 42.986 | 221 | 105 | 6 | 27 | 239 | 27 | 234 | 1.38e-36 | 129 |
| MsG0180004643.01.T01 | AT4G02200 | 33.333 | 204 | 109 | 4 | 34 | 236 | 32 | 209 | 4.57e-26 | 101 |
| MsG0180004643.01.T01 | AT1G02750 | 32.143 | 224 | 121 | 5 | 19 | 238 | 20 | 216 | 7.85e-26 | 100 |
| MsG0180004643.01.T01 | AT4G02200 | 31.193 | 218 | 109 | 5 | 34 | 236 | 32 | 223 | 4.93e-22 | 91.3 |
| MsG0180004643.01.T01 | AT4G02200 | 31.633 | 196 | 107 | 4 | 34 | 228 | 32 | 201 | 1.75e-21 | 89.0 |
| MsG0180004643.01.T01 | AT1G02750 | 31.222 | 221 | 111 | 5 | 19 | 238 | 20 | 200 | 6.44e-21 | 87.4 |
Find 74 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATATGTAGATATGTTTA+TGG | 0.158593 | 1:-80694476 | MsG0180004643.01.T01:intron |
| CTGAAAGAGGATTAGGGTTT+TGG | 0.201422 | 1:+80695228 | None:intergenic |
| AACCTCATCTGATAATTTCT+TGG | 0.251118 | 1:+80693525 | None:intergenic |
| TACATGGAGATCCGCCAAAA+AGG | 0.298414 | 1:+80693659 | None:intergenic |
| TCGTCATTTATATCACCTTT+AGG | 0.299231 | 1:-80693598 | MsG0180004643.01.T01:CDS |
| TTGTGATCTGAAAGAGGATT+AGG | 0.304223 | 1:+80695221 | None:intergenic |
| TCAAAATACTCAGAACAAAA+TGG | 0.307531 | 1:+80694403 | None:intergenic |
| ACGACGCGGATGAAGATATA+AGG | 0.313415 | 1:-80694441 | MsG0180004643.01.T01:CDS |
| TAAATATACTTCCATGTTGT+AGG | 0.329218 | 1:+80694001 | None:intergenic |
| TCATCAAGATGTGATGCTTC+AGG | 0.332282 | 1:-80692629 | MsG0180004643.01.T01:three_prime_UTR |
| TTCAACCAAGTAATAGAGTA+TGG | 0.333111 | 1:+80693790 | None:intergenic |
| CAATCAATAATAAGATAAAA+AGG | 0.341792 | 1:-80693827 | MsG0180004643.01.T01:intron |
| TTTACCCTTTGTTGTTGTTA+GGG | 0.345934 | 1:-80695344 | MsG0180004643.01.T01:five_prime_UTR |
| CAGATGAGGTTGTATCAAAA+AGG | 0.348269 | 1:-80693513 | MsG0180004643.01.T01:intron |
| TCATATGTAGATATGTTTAT+GGG | 0.364564 | 1:-80694475 | MsG0180004643.01.T01:intron |
| CCCACCCTCAATGCACAAAC+TGG | 0.369022 | 1:+80694048 | None:intergenic |
| TGTGATCTGAAAGAGGATTA+GGG | 0.375527 | 1:+80695222 | None:intergenic |
| CTGCATGTATTCTCTTGTTA+AGG | 0.382098 | 1:+80693765 | None:intergenic |
| CAGTTTGTGCATTGAGGGTG+GGG | 0.399469 | 1:-80694047 | MsG0180004643.01.T01:CDS |
| GAGATGCAATCTGCAATCTA+TGG | 0.403146 | 1:-80692590 | MsG0180004643.01.T01:three_prime_UTR |
| AAAAGATGTGAGTTTGTTCA+AGG | 0.426089 | 1:-80692697 | MsG0180004643.01.T01:CDS |
| AATGACGACAGCAGCGGATC+AGG | 0.429498 | 1:+80693613 | None:intergenic |
| CCAGTTTGTGCATTGAGGGT+GGG | 0.436557 | 1:-80694048 | MsG0180004643.01.T01:CDS |
| GGCACCAACCATGTCAGTTA+AGG | 0.449654 | 1:-80692737 | MsG0180004643.01.T01:CDS |
| ATTCTACACTTTCATTATTG+AGG | 0.450122 | 1:-80693711 | MsG0180004643.01.T01:CDS |
| CTCCTTGTCCTTAACTGACA+TGG | 0.453146 | 1:+80692729 | None:intergenic |
| CATCAAGATGTGATGCTTCA+GGG | 0.471749 | 1:-80692628 | MsG0180004643.01.T01:three_prime_UTR |
| TCCAGTTTGTGCATTGAGGG+TGG | 0.471839 | 1:-80694049 | MsG0180004643.01.T01:CDS |
| AGATGTGATGCTTCAGGGGC+GGG | 0.475467 | 1:-80692623 | MsG0180004643.01.T01:three_prime_UTR |
| TGAAACCATACTCTATTACT+TGG | 0.476376 | 1:-80693795 | MsG0180004643.01.T01:CDS |
| ATGTCCAGTTTGTGCATTGA+GGG | 0.478451 | 1:-80694052 | MsG0180004643.01.T01:CDS |
| AAATATACTTCCATGTTGTA+GGG | 0.478691 | 1:+80694002 | None:intergenic |
| TTCACCCTAACAACAACAAA+GGG | 0.483780 | 1:+80695340 | None:intergenic |
| AGAAGAAGAAAAGAAGAAGA+AGG | 0.491005 | 1:+80695296 | None:intergenic |
| CGACGCGGATGAAGATATAA+GGG | 0.493789 | 1:-80694440 | MsG0180004643.01.T01:CDS |
| TACACTTTCATTATTGAGGA+AGG | 0.495459 | 1:-80693707 | MsG0180004643.01.T01:CDS |
| GCCGCTCTTCAATCCCGATC+AGG | 0.499368 | 1:-80695139 | MsG0180004643.01.T01:intron |
| GAAGAAGAAGGAACCTGATC+GGG | 0.499752 | 1:+80695126 | None:intergenic |
| CCTCTTTCAGATCACAATCA+TGG | 0.517741 | 1:-80695215 | MsG0180004643.01.T01:exon |
| AAGAGCGGCTTGATAACGTC+TGG | 0.519588 | 1:+80695153 | None:intergenic |
| TTGAGGAAGGAGCTGAGAGA+AGG | 0.522683 | 1:-80693694 | MsG0180004643.01.T01:CDS |
| TCATGGACGGTGATTCCTCT+TGG | 0.522705 | 1:-80695198 | MsG0180004643.01.T01:CDS |
| ACATGGTTGGTGCCTCTACA+TGG | 0.523150 | 1:+80692746 | None:intergenic |
| AGTTTGTGCATTGAGGGTGG+GGG | 0.526173 | 1:-80694046 | MsG0180004643.01.T01:CDS |
| GAGAATACATGCAGCGCAAG+AGG | 0.529554 | 1:-80693756 | MsG0180004643.01.T01:CDS |
| AAGTGAGAGAGTGAGAGAGA+AGG | 0.539872 | 1:+80695269 | None:intergenic |
| AGAAGAAGAAGGAACCTGAT+CGG | 0.544190 | 1:+80695125 | None:intergenic |
| CTCGCAGATTCATTACCTAA+AGG | 0.546009 | 1:+80693583 | None:intergenic |
| CCATGATTGTGATCTGAAAG+AGG | 0.548620 | 1:+80695215 | None:intergenic |
| ATTTCTTTAAGCTTTATGAT+CGG | 0.553997 | 1:+80692443 | None:intergenic |
| TAAATCGTCATCAAATATTG+TGG | 0.557897 | 1:+80692663 | None:intergenic |
| AAAACAAGTTGCAGCAGCGA+AGG | 0.557920 | 1:+80692410 | None:intergenic |
| ATCCAAGAAATTATCAGATG+AGG | 0.560831 | 1:-80693527 | MsG0180004643.01.T01:CDS |
| TATGTCCAGTTTGTGCATTG+AGG | 0.571210 | 1:-80694053 | MsG0180004643.01.T01:CDS |
| GGCTTGATAACGTCTGGAAG+CGG | 0.576629 | 1:+80695159 | None:intergenic |
| TTTCACCCTAACAACAACAA+AGG | 0.579874 | 1:+80695339 | None:intergenic |
| CGCAAGAGGAAATCACGTAA+AGG | 0.589197 | 1:-80693742 | MsG0180004643.01.T01:CDS |
| TTGTCCTTAACTGACATGGT+TGG | 0.595748 | 1:+80692733 | None:intergenic |
| ATCAAGATGTGATGCTTCAG+GGG | 0.611725 | 1:-80692627 | MsG0180004643.01.T01:three_prime_UTR |
| TTGGGTGTTCTTCATCAATG+TGG | 0.616285 | 1:+80694362 | None:intergenic |
| CATTGATGAAGAACACCCAA+TGG | 0.620331 | 1:-80694359 | MsG0180004643.01.T01:CDS |
| TTAGACGAGGACACTATACA+TGG | 0.625691 | 1:+80693643 | None:intergenic |
| TTTGGATTGTGATGATGAGG+AGG | 0.647857 | 1:+80695246 | None:intergenic |
| AAGATGTGATGCTTCAGGGG+CGG | 0.652551 | 1:-80692624 | MsG0180004643.01.T01:three_prime_UTR |
| AAGAGGAAATCACGTAAAGG+TGG | 0.657544 | 1:-80693739 | MsG0180004643.01.T01:CDS |
| ACCTGATCGGGATTGAAGAG+CGG | 0.658265 | 1:+80695138 | None:intergenic |
| AGAGAGACGAGAAGACCAAG+AGG | 0.660889 | 1:+80695183 | None:intergenic |
| TTTCAGATCACAATCATGGA+CGG | 0.662516 | 1:-80695211 | MsG0180004643.01.T01:exon |
| GATATAAATGACGACAGCAG+CGG | 0.665482 | 1:+80693607 | None:intergenic |
| TGATGAAGAACACCCAATGG+AGG | 0.674724 | 1:-80694356 | MsG0180004643.01.T01:CDS |
| AACCATGTCAGTTAAGGACA+AGG | 0.681006 | 1:-80692731 | MsG0180004643.01.T01:CDS |
| ATCAGGTGCTGCATTAGACG+AGG | 0.688052 | 1:+80693630 | None:intergenic |
| CATGTCAGTTAAGGACAAGG+AGG | 0.702100 | 1:-80692728 | MsG0180004643.01.T01:CDS |
| GCTCACATAACCCTACAACA+TGG | 0.721119 | 1:-80694012 | MsG0180004643.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAGAATTATATATGTAAT+CGG | - | Chr1:80692895-80692914 | MsG0180004643.01.T01:intron | 10.0% |
| !! | CAATCAATAATAAGATAAAA+AGG | - | Chr1:80693941-80693960 | MsG0180004643.01.T01:intron | 15.0% |
| !! | TACATACAAAGTAAATAAAA+TGG | + | Chr1:80694829-80694848 | None:intergenic | 15.0% |
| !! | TGTAAAAATCATTTAAGAAT+TGG | + | Chr1:80693833-80693852 | None:intergenic | 15.0% |
| !!! | TATGAAGTTTACTTATTTTA+AGG | - | Chr1:80693917-80693936 | MsG0180004643.01.T01:intron | 15.0% |
| !!! | TTTCATAAATTTTCTAAGAT+AGG | + | Chr1:80693127-80693146 | None:intergenic | 15.0% |
| !! | AACATTTCTTCAAACTTAAA+TGG | - | Chr1:80694598-80694617 | MsG0180004643.01.T01:intron | 20.0% |
| !! | AACTGAATTGATATATGATA+TGG | - | Chr1:80694311-80694330 | MsG0180004643.01.T01:intron | 20.0% |
| !! | ATATGAAATGTTCAAGAAAT+TGG | - | Chr1:80694382-80694401 | MsG0180004643.01.T01:CDS | 20.0% |
| !! | ATGTTTATGATAGAACATTA+TGG | - | Chr1:80694709-80694728 | MsG0180004643.01.T01:intron | 20.0% |
| !! | TATCATATATCAATTCAGTT+AGG | + | Chr1:80694311-80694330 | None:intergenic | 20.0% |
| !! | TCATATGTAGATATGTTTAT+GGG | - | Chr1:80693293-80693312 | MsG0180004643.01.T01:intron | 20.0% |
| !! | TTCATATGTAGATATGTTTA+TGG | - | Chr1:80693292-80693311 | MsG0180004643.01.T01:intron | 20.0% |
| !!! | ATTTCTTTAAGCTTTATGAT+CGG | + | Chr1:80695328-80695347 | None:intergenic | 20.0% |
| !!! | CTACTTTTTATTTTTTCACT+AGG | + | Chr1:80695233-80695252 | None:intergenic | 20.0% |
| ! | AAATACTTGCACATAAACAT+AGG | + | Chr1:80693251-80693270 | None:intergenic | 25.0% |
| ! | AAATATACTTCCATGTTGTA+GGG | + | Chr1:80693769-80693788 | None:intergenic | 25.0% |
| ! | AACAATTTAAATTCCACTGA+TGG | + | Chr1:80692955-80692974 | None:intergenic | 25.0% |
| ! | ACAATATTTAGTATTCTCAC+AGG | + | Chr1:80694354-80694373 | None:intergenic | 25.0% |
| ! | ATTAAGCTGTTTATTCCAAA+AGG | + | Chr1:80693035-80693054 | None:intergenic | 25.0% |
| ! | ATTCTACACTTTCATTATTG+AGG | - | Chr1:80694057-80694076 | MsG0180004643.01.T01:CDS | 25.0% |
| ! | TAAATATACTTCCATGTTGT+AGG | + | Chr1:80693770-80693789 | None:intergenic | 25.0% |
| ! | TAAATCGTCATCAAATATTG+TGG | + | Chr1:80695108-80695127 | None:intergenic | 25.0% |
| ! | TCAAAATACTCAGAACAAAA+TGG | + | Chr1:80693368-80693387 | None:intergenic | 25.0% |
| ! | TCACCTATATGAAATAAACA+GGG | + | Chr1:80693581-80693600 | None:intergenic | 25.0% |
| ! | TCAGTGGAATTTAAATTGTT+TGG | - | Chr1:80692955-80692974 | MsG0180004643.01.T01:intron | 25.0% |
| ! | TTAAGCTGTTTATTCCAAAA+GGG | + | Chr1:80693034-80693053 | None:intergenic | 25.0% |
| ! | TTATATATGTAATCGGCAAT+TGG | - | Chr1:80692902-80692921 | MsG0180004643.01.T01:intron | 25.0% |
| ! | TTATCTGTGAATTTAGTTAC+AGG | - | Chr1:80694683-80694702 | MsG0180004643.01.T01:intron | 25.0% |
| ! | TTCACCTATATGAAATAAAC+AGG | + | Chr1:80693582-80693601 | None:intergenic | 25.0% |
| ! | TTTCCAATAACATTACACAA+TGG | - | Chr1:80694948-80694967 | MsG0180004643.01.T01:intron | 25.0% |
| ! | TTTCCCTGTTTATTTCATAT+AGG | - | Chr1:80693575-80693594 | MsG0180004643.01.T01:CDS | 25.0% |
| !!! | TCTGAGTATTTTGATATTGT+TGG | - | Chr1:80693374-80693393 | MsG0180004643.01.T01:intron | 25.0% |
| AAACAGGGAAATATATGTAG+AGG | + | Chr1:80693566-80693585 | None:intergenic | 30.0% | |
| AAATGGTCAATTGAATAAGC+TGG | + | Chr1:80694812-80694831 | None:intergenic | 30.0% | |
| AACCTCATCTGATAATTTCT+TGG | + | Chr1:80694246-80694265 | None:intergenic | 30.0% | |
| ACATAAACATAGGAGTAAAG+AGG | + | Chr1:80693241-80693260 | None:intergenic | 30.0% | |
| ACTAAATTGATTGATCGTTC+AGG | + | Chr1:80694886-80694905 | None:intergenic | 30.0% | |
| AGAAGAAGAAAAGAAGAAGA+AGG | + | Chr1:80692475-80692494 | None:intergenic | 30.0% | |
| AGGAATGAACAAAAGCTTTA+CGG | + | Chr1:80693546-80693565 | None:intergenic | 30.0% | |
| ATATAGATACTAGCTCAGTT+AGG | - | Chr1:80692734-80692753 | MsG0180004643.01.T01:CDS | 30.0% | |
| ATCCAAGAAATTATCAGATG+AGG | - | Chr1:80694241-80694260 | MsG0180004643.01.T01:intron | 30.0% | |
| ATGCCATTGTGTAATGTTAT+TGG | + | Chr1:80694954-80694973 | None:intergenic | 30.0% | |
| CTCAAATAAGTCAATCCTAA+CGG | - | Chr1:80693201-80693220 | MsG0180004643.01.T01:intron | 30.0% | |
| GAAATGTTCAAGAAATTGGT+AGG | - | Chr1:80694386-80694405 | MsG0180004643.01.T01:CDS | 30.0% | |
| GAGCTAGTATCTATATGTAA+AGG | + | Chr1:80692730-80692749 | None:intergenic | 30.0% | |
| TACACTTTCATTATTGAGGA+AGG | - | Chr1:80694061-80694080 | MsG0180004643.01.T01:intron | 30.0% | |
| TATTTGTGGTTATTGATGTG+AGG | - | Chr1:80693266-80693285 | MsG0180004643.01.T01:intron | 30.0% | |
| TCAAATAAGTCAATCCTAAC+GGG | - | Chr1:80693202-80693221 | MsG0180004643.01.T01:intron | 30.0% | |
| TCGTCATTTATATCACCTTT+AGG | - | Chr1:80694170-80694189 | MsG0180004643.01.T01:intron | 30.0% | |
| TGAAACCATACTCTATTACT+TGG | - | Chr1:80693973-80693992 | MsG0180004643.01.T01:intron | 30.0% | |
| TGTTTATGTGCAAGTATTTG+TGG | - | Chr1:80693252-80693271 | MsG0180004643.01.T01:intron | 30.0% | |
| TTATTCCAAAAGGGTTTAAG+TGG | + | Chr1:80693025-80693044 | None:intergenic | 30.0% | |
| TTCAACCAAGTAATAGAGTA+TGG | + | Chr1:80693981-80694000 | None:intergenic | 30.0% | |
| ! | AAAAGATGTGAGTTTGTTCA+AGG | - | Chr1:80695071-80695090 | MsG0180004643.01.T01:intron | 30.0% |
| ! | AATTTACAATCCCTTTTTGG+CGG | - | Chr1:80694098-80694117 | MsG0180004643.01.T01:intron | 30.0% |
| ! | ACAGTGAAATAAAGCTTTTC+AGG | + | Chr1:80694494-80694513 | None:intergenic | 30.0% |
| ! | AGAACTTGGTGAGAAAAAAA+AGG | + | Chr1:80693799-80693818 | None:intergenic | 30.0% |
| ! | ATTATGACATTTTTGTGTGC+AGG | - | Chr1:80693692-80693711 | MsG0180004643.01.T01:CDS | 30.0% |
| ! | CTTACAAGGTTTTCAGTATT+GGG | - | Chr1:80693492-80693511 | MsG0180004643.01.T01:intron | 30.0% |
| ! | GGAAATTTACAATCCCTTTT+TGG | - | Chr1:80694095-80694114 | MsG0180004643.01.T01:intron | 30.0% |
| ! | TTTTCTCACCAAGTTCTATT+CGG | - | Chr1:80693802-80693821 | MsG0180004643.01.T01:CDS | 30.0% |
| !! | AAGCTTTATTTCACTGTTTC+TGG | - | Chr1:80694497-80694516 | MsG0180004643.01.T01:intron | 30.0% |
| !! | TTTACCCTTTGTTGTTGTTA+GGG | - | Chr1:80692424-80692443 | MsG0180004643.01.T01:three_prime_UTR | 30.0% |
| !!! | GTGTTTTAGTTGTTGCTAAT+AGG | - | Chr1:80692865-80692884 | MsG0180004643.01.T01:intron | 30.0% |
| !!! | TTTTACCCTTTGTTGTTGTT+AGG | - | Chr1:80692423-80692442 | MsG0180004643.01.T01:three_prime_UTR | 30.0% |
| AGATTATTGAGATCCATCAG+TGG | - | Chr1:80692939-80692958 | MsG0180004643.01.T01:intron | 35.0% | |
| ATACTGAAAACCTTGTAAGC+TGG | + | Chr1:80693491-80693510 | None:intergenic | 35.0% | |
| ATTGAGCTAGAGAGAGAAAT+TGG | + | Chr1:80692687-80692706 | None:intergenic | 35.0% | |
| CACAGACAATATTTGCAACA+AGG | + | Chr1:80694910-80694929 | None:intergenic | 35.0% | |
| CAGATGAGGTTGTATCAAAA+AGG | - | Chr1:80694255-80694274 | MsG0180004643.01.T01:intron | 35.0% | |
| CTCACAGGAAAAACAATGAT+GGG | + | Chr1:80694339-80694358 | None:intergenic | 35.0% | |
| CTGCATGTATTCTCTTGTTA+AGG | + | Chr1:80694006-80694025 | None:intergenic | 35.0% | |
| CTGGTTGGAAAAACAACATA+AGG | + | Chr1:80693472-80693491 | None:intergenic | 35.0% | |
| GAAAGGCTACAAATACAATC+AGG | + | Chr1:80694862-80694881 | None:intergenic | 35.0% | |
| GCAAATAATTAGAACCCGTT+AGG | + | Chr1:80693219-80693238 | None:intergenic | 35.0% | |
| TCTCACAGGAAAAACAATGA+TGG | + | Chr1:80694340-80694359 | None:intergenic | 35.0% | |
| TGGTACTAGTGTTTGAAAAC+AGG | - | Chr1:80694517-80694536 | MsG0180004643.01.T01:intron | 35.0% | |
| TGTAATTTGATCCATGTAGC+CGG | - | Chr1:80694732-80694751 | MsG0180004643.01.T01:intron | 35.0% | |
| TGTGATCTGAAAGAGGATTA+GGG | + | Chr1:80692549-80692568 | None:intergenic | 35.0% | |
| TTAAACATGCCAACATCATG+CGG | + | Chr1:80694662-80694681 | None:intergenic | 35.0% | |
| TTCACCCTAACAACAACAAA+GGG | + | Chr1:80692431-80692450 | None:intergenic | 35.0% | |
| TTGAGCTAGAGAGAGAAATT+GGG | + | Chr1:80692686-80692705 | None:intergenic | 35.0% | |
| TTGTGATCTGAAAGAGGATT+AGG | + | Chr1:80692550-80692569 | None:intergenic | 35.0% | |
| TTTCACCCTAACAACAACAA+AGG | + | Chr1:80692432-80692451 | None:intergenic | 35.0% | |
| TTTCAGATCACAATCATGGA+CGG | - | Chr1:80692557-80692576 | MsG0180004643.01.T01:three_prime_UTR | 35.0% | |
| ! | GCTTACAAGGTTTTCAGTAT+TGG | - | Chr1:80693491-80693510 | MsG0180004643.01.T01:intron | 35.0% |
| ! | TAAGCCTTATCCCACTAAAT+GGG | + | Chr1:80694759-80694778 | None:intergenic | 35.0% |
| ! | TTGTACCACTTAAACCCTTT+TGG | - | Chr1:80693017-80693036 | MsG0180004643.01.T01:intron | 35.0% |
| ! | TTTTCTTTTCAGCCATGTAG+AGG | - | Chr1:80695010-80695029 | MsG0180004643.01.T01:intron | 35.0% |
| AAAAAGGGGAGAGAAGAAGA+AGG | + | Chr1:80692657-80692676 | None:intergenic | 40.0% | |
| AAATTGGGGGAAGGAAAAAG+GGG | + | Chr1:80692671-80692690 | None:intergenic | 40.0% | |
| AACCATGTCAGTTAAGGACA+AGG | - | Chr1:80695037-80695056 | MsG0180004643.01.T01:intron | 40.0% | |
| AAGAGGAAATCACGTAAAGG+TGG | - | Chr1:80694029-80694048 | MsG0180004643.01.T01:CDS | 40.0% | |
| ACCCAATGGAGGCAAAAAAT+GGG | - | Chr1:80693423-80693442 | MsG0180004643.01.T01:intron | 40.0% | |
| AGAAATTGGGGGAAGGAAAA+AGG | + | Chr1:80692673-80692692 | None:intergenic | 40.0% | |
| AGAAGAAGAAGGAACCTGAT+CGG | + | Chr1:80692646-80692665 | None:intergenic | 40.0% | |
| ATATTGTCTGTGCCTTGCTA+AGG | - | Chr1:80694918-80694937 | MsG0180004643.01.T01:intron | 40.0% | |
| ATCAAGATGTGATGCTTCAG+GGG | - | Chr1:80695141-80695160 | MsG0180004643.01.T01:CDS | 40.0% | |
| ATGTCCAGTTTGTGCATTGA+GGG | - | Chr1:80693716-80693735 | MsG0180004643.01.T01:CDS | 40.0% | |
| CATCAAGATGTGATGCTTCA+GGG | - | Chr1:80695140-80695159 | MsG0180004643.01.T01:CDS | 40.0% | |
| CATTGATGAAGAACACCCAA+TGG | - | Chr1:80693409-80693428 | MsG0180004643.01.T01:intron | 40.0% | |
| CATTTAGTGGGATAAGGCTT+AGG | - | Chr1:80694758-80694777 | MsG0180004643.01.T01:intron | 40.0% | |
| CCATGATTGTGATCTGAAAG+AGG | + | Chr1:80692556-80692575 | None:intergenic | 40.0% | |
| CCTCTTTCAGATCACAATCA+TGG | - | Chr1:80692553-80692572 | MsG0180004643.01.T01:three_prime_UTR | 40.0% | |
| CTCGCAGATTCATTACCTAA+AGG | + | Chr1:80694188-80694207 | None:intergenic | 40.0% | |
| GAAATTGGGGGAAGGAAAAA+GGG | + | Chr1:80692672-80692691 | None:intergenic | 40.0% | |
| GAGATGCAATCTGCAATCTA+TGG | - | Chr1:80695178-80695197 | MsG0180004643.01.T01:CDS | 40.0% | |
| GATATAAATGACGACAGCAG+CGG | + | Chr1:80694164-80694183 | None:intergenic | 40.0% | |
| GCATGAGTTCTATTGTCAAC+TGG | - | Chr1:80694970-80694989 | MsG0180004643.01.T01:intron | 40.0% | |
| GGAAAATTATGCCCTTAGCA+AGG | + | Chr1:80694933-80694952 | None:intergenic | 40.0% | |
| GTGCGACAGAAATGATAAGT+AGG | + | Chr1:80694463-80694482 | None:intergenic | 40.0% | |
| TATGTCCAGTTTGTGCATTG+AGG | - | Chr1:80693715-80693734 | MsG0180004643.01.T01:CDS | 40.0% | |
| TATTGTCTGTGCCTTGCTAA+GGG | - | Chr1:80694919-80694938 | MsG0180004643.01.T01:intron | 40.0% | |
| TCATCAAGATGTGATGCTTC+AGG | - | Chr1:80695139-80695158 | MsG0180004643.01.T01:intron | 40.0% | |
| TGAAAACCTTGTAAGCTGGT+TGG | + | Chr1:80693487-80693506 | None:intergenic | 40.0% | |
| TGAGCTAGAGAGAGAAATTG+GGG | + | Chr1:80692685-80692704 | None:intergenic | 40.0% | |
| TGATTGATCGTTCAGGTGAA+AGG | + | Chr1:80694879-80694898 | None:intergenic | 40.0% | |
| TTAGACGAGGACACTATACA+TGG | + | Chr1:80694128-80694147 | None:intergenic | 40.0% | |
| TTGGGTGTTCTTCATCAATG+TGG | + | Chr1:80693409-80693428 | None:intergenic | 40.0% | |
| TTGTCCTTAACTGACATGGT+TGG | + | Chr1:80695038-80695057 | None:intergenic | 40.0% | |
| ! | AAGCCTTATCCCACTAAATG+GGG | + | Chr1:80694758-80694777 | None:intergenic | 40.0% |
| ! | CGCGAAACATTTGACAGTTT+TGG | - | Chr1:80694544-80694563 | MsG0180004643.01.T01:intron | 40.0% |
| ! | CTAAGCCTTATCCCACTAAA+TGG | + | Chr1:80694760-80694779 | None:intergenic | 40.0% |
| ! | CTGAAAGAGGATTAGGGTTT+TGG | + | Chr1:80692543-80692562 | None:intergenic | 40.0% |
| ! | GTTTTTCCAACCAGCTTACA+AGG | - | Chr1:80693478-80693497 | MsG0180004643.01.T01:intron | 40.0% |
| ! | TTTGGATTGTGATGATGAGG+AGG | + | Chr1:80692525-80692544 | None:intergenic | 40.0% |
| !!! | GGTTTTGGATTGTGATGATG+AGG | + | Chr1:80692528-80692547 | None:intergenic | 40.0% |
| AAGTGAGAGAGTGAGAGAGA+AGG | + | Chr1:80692502-80692521 | None:intergenic | 45.0% | |
| ACATGGAGATCCGCCAAAAA+GGG | + | Chr1:80694111-80694130 | None:intergenic | 45.0% | |
| ACGACGCGGATGAAGATATA+AGG | - | Chr1:80693327-80693346 | MsG0180004643.01.T01:intron | 45.0% | |
| CACCCAATGGAGGCAAAAAA+TGG | - | Chr1:80693422-80693441 | MsG0180004643.01.T01:intron | 45.0% | |
| CATGTCAGTTAAGGACAAGG+AGG | - | Chr1:80695040-80695059 | MsG0180004643.01.T01:intron | 45.0% | |
| CCCAATGGAGGCAAAAAATG+GGG | - | Chr1:80693424-80693443 | MsG0180004643.01.T01:intron | 45.0% | |
| CGACGCGGATGAAGATATAA+GGG | - | Chr1:80693328-80693347 | MsG0180004643.01.T01:intron | 45.0% | |
| CGCAAGAGGAAATCACGTAA+AGG | - | Chr1:80694026-80694045 | MsG0180004643.01.T01:CDS | 45.0% | |
| CTCCTTGTCCTTAACTGACA+TGG | + | Chr1:80695042-80695061 | None:intergenic | 45.0% | |
| GAAGAAGAAGGAACCTGATC+GGG | + | Chr1:80692645-80692664 | None:intergenic | 45.0% | |
| GAGCTAGAGAGAGAAATTGG+GGG | + | Chr1:80692684-80692703 | None:intergenic | 45.0% | |
| GCTCACATAACCCTACAACA+TGG | - | Chr1:80693756-80693775 | MsG0180004643.01.T01:CDS | 45.0% | |
| TACATGGAGATCCGCCAAAA+AGG | + | Chr1:80694112-80694131 | None:intergenic | 45.0% | |
| TAGAGAGAGAAATTGGGGGA+AGG | + | Chr1:80692680-80692699 | None:intergenic | 45.0% | |
| TAGTACCAACCGCATGATGT+TGG | - | Chr1:80694650-80694669 | MsG0180004643.01.T01:intron | 45.0% | |
| TGATGAAGAACACCCAATGG+AGG | - | Chr1:80693412-80693431 | MsG0180004643.01.T01:intron | 45.0% | |
| TGGCTGAACCGAATAGAACT+TGG | + | Chr1:80693813-80693832 | None:intergenic | 45.0% | |
| TTAGTGGGATAAGGCTTAGG+TGG | - | Chr1:80694761-80694780 | MsG0180004643.01.T01:intron | 45.0% | |
| ! | ATGCGGTTGGTACTAATAGC+GGG | + | Chr1:80694645-80694664 | None:intergenic | 45.0% |
| ! | CATGCGGTTGGTACTAATAG+CGG | + | Chr1:80694646-80694665 | None:intergenic | 45.0% |
| !! | TAGGTGGTGGTGTTGTTAGT+TGG | - | Chr1:80694777-80694796 | MsG0180004643.01.T01:intron | 45.0% |
| !!! | ACCCCATTTTTTGCCTCCAT+TGG | + | Chr1:80693428-80693447 | None:intergenic | 45.0% |
| !!! | CCCCATTTTTTGCCTCCATT+GGG | + | Chr1:80693427-80693446 | None:intergenic | 45.0% |
| !!! | AATTTTTTTAGATTAATTTT+TGG | + | Chr1:80692799-80692818 | None:intergenic | 5.0% |
| AAGATGTGATGCTTCAGGGG+CGG | - | Chr1:80695144-80695163 | MsG0180004643.01.T01:CDS | 50.0% | |
| ACATGCCAACATCATGCGGT+TGG | + | Chr1:80694658-80694677 | None:intergenic | 50.0% | |
| ACCTGATCGGGATTGAAGAG+CGG | + | Chr1:80692633-80692652 | None:intergenic | 50.0% | |
| AGAGAGACGAGAAGACCAAG+AGG | + | Chr1:80692588-80692607 | None:intergenic | 50.0% | |
| AGTTTGTGCATTGAGGGTGG+GGG | - | Chr1:80693722-80693741 | MsG0180004643.01.T01:CDS | 50.0% | |
| CAGTTTGTGCATTGAGGGTG+GGG | - | Chr1:80693721-80693740 | MsG0180004643.01.T01:CDS | 50.0% | |
| CCAGTTTGTGCATTGAGGGT+GGG | - | Chr1:80693720-80693739 | MsG0180004643.01.T01:CDS | 50.0% | |
| CTTATCCCACTAAATGGGGC+CGG | + | Chr1:80694754-80694773 | None:intergenic | 50.0% | |
| GAGAATACATGCAGCGCAAG+AGG | - | Chr1:80694012-80694031 | MsG0180004643.01.T01:CDS | 50.0% | |
| GGCACCAACCATGTCAGTTA+AGG | - | Chr1:80695031-80695050 | MsG0180004643.01.T01:intron | 50.0% | |
| TCATGGACGGTGATTCCTCT+TGG | - | Chr1:80692570-80692589 | MsG0180004643.01.T01:three_prime_UTR | 50.0% | |
| TCCAGTTTGTGCATTGAGGG+TGG | - | Chr1:80693719-80693738 | MsG0180004643.01.T01:CDS | 50.0% | |
| TTGAGGAAGGAGCTGAGAGA+AGG | - | Chr1:80694074-80694093 | MsG0180004643.01.T01:intron | 50.0% | |
| ! | ACATGGTTGGTGCCTCTACA+TGG | + | Chr1:80695025-80695044 | None:intergenic | 50.0% |
| ! | ATCAGGTGCTGCATTAGACG+AGG | + | Chr1:80694141-80694160 | None:intergenic | 50.0% |
| !! | AAGAGCGGCTTGATAACGTC+TGG | + | Chr1:80692618-80692637 | None:intergenic | 50.0% |
| !! | ATTGAGGGTGGGGGTTGATA+TGG | - | Chr1:80693731-80693750 | MsG0180004643.01.T01:CDS | 50.0% |
| !! | GGCTTGATAACGTCTGGAAG+CGG | + | Chr1:80692612-80692631 | None:intergenic | 50.0% |
| !! | GGGTTTTGATGAGAACGACG+CGG | - | Chr1:80693313-80693332 | MsG0180004643.01.T01:intron | 50.0% |
| AATGACGACAGCAGCGGATC+AGG | + | Chr1:80694158-80694177 | None:intergenic | 55.0% | |
| ACTAAATGGGGCCGGCTACA+TGG | + | Chr1:80694746-80694765 | None:intergenic | 55.0% | |
| AGATGTGATGCTTCAGGGGC+GGG | - | Chr1:80695145-80695164 | MsG0180004643.01.T01:CDS | 55.0% | |
| ATGTAGCCGGCCCCATTTAG+TGG | - | Chr1:80694745-80694764 | MsG0180004643.01.T01:intron | 55.0% | |
| CCCACCCTCAATGCACAAAC+TGG | + | Chr1:80693723-80693742 | None:intergenic | 55.0% | |
| CGGCCCCATTTAGTGGGATA+AGG | - | Chr1:80694752-80694771 | MsG0180004643.01.T01:intron | 55.0% | |
| GTGGGATAAGGCTTAGGTGG+TGG | - | Chr1:80694764-80694783 | MsG0180004643.01.T01:intron | 55.0% | |
| TGTAGCCGGCCCCATTTAGT+GGG | - | Chr1:80694746-80694765 | MsG0180004643.01.T01:intron | 55.0% | |
| GCCGCTCTTCAATCCCGATC+AGG | - | Chr1:80692629-80692648 | MsG0180004643.01.T01:three_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 80692418 | 80695372 | 80692418 | ID=MsG0180004643.01;Name=MsG0180004643.01 |
| Chr1 | mRNA | 80692418 | 80695372 | 80692418 | ID=MsG0180004643.01.T01;Parent=MsG0180004643.01;Name=MsG0180004643.01.T01;_AED=0.32;_eAED=0.32;_QI=154|0.75|0.6|1|0.75|0.6|5|242|239 |
| Chr1 | exon | 80692418 | 80692768 | 80692418 | ID=MsG0180004643.01.T01:exon:34126;Parent=MsG0180004643.01.T01 |
| Chr1 | exon | 80693514 | 80693835 | 80693514 | ID=MsG0180004643.01.T01:exon:34125;Parent=MsG0180004643.01.T01 |
| Chr1 | exon | 80694010 | 80694076 | 80694010 | ID=MsG0180004643.01.T01:exon:34124;Parent=MsG0180004643.01.T01 |
| Chr1 | exon | 80694345 | 80694487 | 80694345 | ID=MsG0180004643.01.T01:exon:34123;Parent=MsG0180004643.01.T01 |
| Chr1 | exon | 80695140 | 80695372 | 80695140 | ID=MsG0180004643.01.T01:exon:34122;Parent=MsG0180004643.01.T01 |
| Chr1 | five_prime_UTR | 80695219 | 80695372 | 80695219 | ID=MsG0180004643.01.T01:five_prime_utr;Parent=MsG0180004643.01.T01 |
| Chr1 | CDS | 80695140 | 80695218 | 80695140 | ID=MsG0180004643.01.T01:cds;Parent=MsG0180004643.01.T01 |
| Chr1 | CDS | 80694345 | 80694487 | 80694345 | ID=MsG0180004643.01.T01:cds;Parent=MsG0180004643.01.T01 |
| Chr1 | CDS | 80694010 | 80694076 | 80694010 | ID=MsG0180004643.01.T01:cds;Parent=MsG0180004643.01.T01 |
| Chr1 | CDS | 80693514 | 80693835 | 80693514 | ID=MsG0180004643.01.T01:cds;Parent=MsG0180004643.01.T01 |
| Chr1 | CDS | 80692660 | 80692768 | 80692660 | ID=MsG0180004643.01.T01:cds;Parent=MsG0180004643.01.T01 |
| Chr1 | three_prime_UTR | 80692418 | 80692659 | 80692418 | ID=MsG0180004643.01.T01:three_prime_utr;Parent=MsG0180004643.01.T01 |
| Gene Sequence |
| Protein sequence |
