Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005657.01.T01 | XP_003592476.2 | 98.754 | 321 | 3 | 1 | 1 | 320 | 1 | 321 | 0 | 644 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005657.01.T01 | Q9MA90 | 69.579 | 309 | 92 | 2 | 1 | 308 | 1 | 308 | 7.76E-157 | 444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005657.01.T01 | G7IE57 | 98.754 | 321 | 3 | 1 | 1 | 320 | 1 | 321 | 0.0 | 644 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048896.01 | MsG0180005657.01 | 0.820832 | 5.567548e-53 | 4.454035e-50 |
| MsG0080049016.01 | MsG0180005657.01 | 0.809645 | 1.708449e-50 | 1.008666e-47 |
| MsG0080049018.01 | MsG0180005657.01 | 0.808794 | 2.600170e-50 | 1.500534e-47 |
| MsG0080049062.01 | MsG0180005657.01 | 0.813907 | 2.017741e-51 | 1.334516e-48 |
| MsG0180000322.01 | MsG0180005657.01 | 0.831740 | 1.406149e-55 | 1.539845e-52 |
| MsG0180001907.01 | MsG0180005657.01 | 0.814829 | 1.262187e-51 | 8.558859e-49 |
| MsG0180002099.01 | MsG0180005657.01 | 0.803856 | 2.854986e-49 | 1.450226e-46 |
| MsG0180002425.01 | MsG0180005657.01 | 0.803076 | 4.141859e-49 | 2.062006e-46 |
| MsG0180002982.01 | MsG0180005657.01 | 0.847253 | 1.299823e-59 | 2.296766e-56 |
| MsG0180003442.01 | MsG0180005657.01 | 0.802933 | 4.434563e-49 | 2.199799e-46 |
| MsG0180003758.01 | MsG0180005657.01 | 0.804324 | 2.281532e-49 | 1.172917e-46 |
| MsG0180003880.01 | MsG0180005657.01 | 0.813491 | 2.492149e-51 | 1.629890e-48 |
| MsG0180004177.01 | MsG0180005657.01 | 0.800600 | 1.335541e-48 | 6.244296e-46 |
| MsG0180004292.01 | MsG0180005657.01 | 0.801000 | 1.107023e-48 | 5.228985e-46 |
| MsG0180004458.01 | MsG0180005657.01 | 0.832325 | 1.008376e-55 | 1.123158e-52 |
| MsG0180004502.01 | MsG0180005657.01 | 0.824313 | 8.635344e-54 | 7.620936e-51 |
| MsG0180004504.01 | MsG0180005657.01 | 0.836467 | 9.199563e-57 | 1.160389e-53 |
| MsG0180004553.01 | MsG0180005657.01 | 0.801841 | 7.444050e-49 | 3.591494e-46 |
| MsG0180004580.01 | MsG0180005657.01 | 0.817650 | 2.954786e-52 | 2.164283e-49 |
| MsG0180004581.01 | MsG0180005657.01 | 0.817389 | 3.382758e-52 | 2.460266e-49 |
| MsG0180004865.01 | MsG0180005657.01 | 0.815005 | 1.153901e-51 | 7.862082e-49 |
| MsG0180005283.01 | MsG0180005657.01 | 0.810382 | 1.184916e-50 | 7.131662e-48 |
| MsG0180005516.01 | MsG0180005657.01 | 0.819005 | 1.457620e-52 | 1.108412e-49 |
| MsG0180005657.01 | MsG0180005811.01 | 0.822526 | 2.259503e-53 | 1.896060e-50 |
| MsG0180005657.01 | MsG0180006227.01 | 0.805694 | 1.179875e-49 | 6.283616e-47 |
| MsG0180005657.01 | MsG0180006239.01 | 0.802520 | 5.396818e-49 | 2.649004e-46 |
| MsG0180005657.01 | MsG0280006534.01 | 0.803901 | 2.793681e-49 | 1.420792e-46 |
| MsG0180005657.01 | MsG0280006973.01 | 0.804340 | 2.264614e-49 | 1.164679e-46 |
| MsG0180005657.01 | MsG0280007017.01 | 0.812183 | 4.818184e-51 | 3.042528e-48 |
| MsG0180005657.01 | MsG0280008430.01 | 0.802770 | 4.791563e-49 | 2.367171e-46 |
| MsG0180005657.01 | MsG0280009103.01 | 0.806856 | 6.713443e-50 | 3.683284e-47 |
| MsG0180005657.01 | MsG0280009287.01 | 0.820622 | 6.223853e-53 | 4.949363e-50 |
| MsG0180005657.01 | MsG0280009434.01 | 0.807391 | 5.171328e-50 | 2.876892e-47 |
| MsG0180005657.01 | MsG0280009776.01 | 0.801634 | 8.207279e-49 | 3.938902e-46 |
| MsG0180005657.01 | MsG0280010461.01 | 0.801568 | 8.466556e-49 | 4.056584e-46 |
| MsG0180005657.01 | MsG0280010803.01 | 0.825884 | 3.674724e-54 | 3.392476e-51 |
| MsG0180005657.01 | MsG0280011475.01 | 0.803551 | 3.302669e-49 | 1.664579e-46 |
| MsG0180005657.01 | MsG0380013501.01 | 0.835592 | 1.533746e-56 | 1.884156e-53 |
| MsG0180005657.01 | MsG0380014795.01 | 0.804343 | 2.260945e-49 | 1.162907e-46 |
| MsG0180005657.01 | MsG0380015077.01 | 0.815881 | 7.366893e-52 | 5.140835e-49 |
| MsG0180005657.01 | MsG0380015103.01 | 0.804857 | 1.766003e-49 | 9.205254e-47 |
| MsG0180005657.01 | MsG0380015439.01 | 0.814205 | 1.734618e-51 | 1.156533e-48 |
| MsG0180005657.01 | MsG0380015619.01 | 0.806830 | 6.800189e-50 | 3.728229e-47 |
| MsG0180005657.01 | MsG0380015974.01 | 0.806671 | 7.343653e-50 | 4.009613e-47 |
| MsG0180005657.01 | MsG0380015985.01 | 0.813859 | 2.067607e-51 | 1.365699e-48 |
| MsG0180005657.01 | MsG0380016231.01 | 0.800536 | 1.376309e-48 | 6.424359e-46 |
| MsG0180005657.01 | MsG0380016354.01 | 0.830907 | 2.254777e-55 | 2.408687e-52 |
| MsG0180005657.01 | MsG0380016478.01 | 0.809181 | 2.148526e-50 | 1.252852e-47 |
| MsG0180005657.01 | MsG0380017317.01 | 0.816272 | 6.024690e-52 | 4.249779e-49 |
| MsG0180005657.01 | MsG0380017647.01 | 0.806488 | 8.027649e-50 | 4.362768e-47 |
| MsG0180005657.01 | MsG0380017773.01 | 0.813499 | 2.481264e-51 | 1.623136e-48 |
| MsG0180005657.01 | MsG0380017928.01 | 0.813182 | 2.913023e-51 | 1.888990e-48 |
| MsG0180005657.01 | MsG0480018098.01 | 0.826730 | 2.310565e-54 | 2.184951e-51 |
| MsG0180005657.01 | MsG0480018100.01 | 0.819054 | 1.420604e-52 | 1.081637e-49 |
| MsG0180005657.01 | MsG0480018101.01 | 0.822860 | 1.889664e-53 | 1.600775e-50 |
| MsG0180005657.01 | MsG0480018108.01 | 0.816520 | 5.301647e-52 | 3.765005e-49 |
| MsG0180005657.01 | MsG0480018328.01 | 0.818702 | 1.707580e-52 | 1.287484e-49 |
| MsG0180005657.01 | MsG0480018329.01 | 0.803253 | 3.807662e-49 | 1.904377e-46 |
| MsG0180005657.01 | MsG0480018330.01 | 0.814468 | 1.517052e-51 | 1.018824e-48 |
| MsG0180005657.01 | MsG0480018494.01 | 0.843478 | 1.366750e-58 | 2.141090e-55 |
| MsG0180005657.01 | MsG0480018658.01 | 0.815646 | 8.309653e-52 | 5.762238e-49 |
| MsG0180005657.01 | MsG0480019376.01 | 0.819847 | 9.365756e-53 | 7.290089e-50 |
| MsG0180005657.01 | MsG0480019485.01 | 0.825607 | 4.275211e-54 | 3.915596e-51 |
| MsG0180005657.01 | MsG0480019836.01 | 0.804031 | 2.625535e-49 | 1.339669e-46 |
| MsG0180005657.01 | MsG0480020269.01 | 0.821395 | 4.130554e-53 | 3.356467e-50 |
| MsG0180005657.01 | MsG0480020393.01 | 0.821403 | 4.112820e-53 | 3.342728e-50 |
| MsG0180005657.01 | MsG0480021654.01 | 0.808020 | 3.802653e-50 | 2.150419e-47 |
| MsG0180005657.01 | MsG0480022297.01 | 0.802731 | 4.880817e-49 | 2.408871e-46 |
| MsG0180005657.01 | MsG0480022458.01 | 0.809275 | 2.050355e-50 | 1.198633e-47 |
| MsG0180005657.01 | MsG0480022626.01 | 0.835276 | 1.843601e-56 | 2.243728e-53 |
| MsG0180005657.01 | MsG0480023056.01 | 0.821026 | 5.024620e-53 | 4.041662e-50 |
| MsG0180005657.01 | MsG0480023211.01 | 0.806163 | 9.400361e-50 | 5.066772e-47 |
| MsG0180005657.01 | MsG0480023376.01 | 0.802040 | 6.775845e-49 | 3.285568e-46 |
| MsG0180005657.01 | MsG0480023482.01 | 0.812187 | 4.809047e-51 | 3.037092e-48 |
| MsG0180005657.01 | MsG0480023483.01 | 0.806259 | 8.972374e-50 | 4.847988e-47 |
| MsG0180005657.01 | MsG0480023502.01 | 0.819890 | 9.156996e-53 | 7.136224e-50 |
| MsG0180005657.01 | MsG0480023695.01 | 0.810102 | 1.362242e-50 | 8.139481e-48 |
| MsG0180005657.01 | MsG0480023850.01 | 0.822988 | 1.763798e-53 | 1.499585e-50 |
| MsG0180005657.01 | MsG0580024278.01 | 0.824612 | 7.345872e-54 | 6.540233e-51 |
| MsG0180005657.01 | MsG0580024360.01 | 0.805063 | 1.599844e-49 | 8.382799e-47 |
| MsG0180005657.01 | MsG0580024493.01 | 0.805137 | 1.543557e-49 | 8.103458e-47 |
| MsG0180005657.01 | MsG0580025315.01 | 0.803570 | 3.272771e-49 | 1.650355e-46 |
| MsG0180005657.01 | MsG0580025373.01 | 0.810052 | 1.396478e-50 | 8.333083e-48 |
| MsG0180005657.01 | MsG0580025392.01 | 0.809995 | 1.436527e-50 | 8.559565e-48 |
| MsG0180005657.01 | MsG0580025447.01 | 0.826065 | 3.327642e-54 | 3.087684e-51 |
| MsG0180005657.01 | MsG0580026211.01 | 0.804828 | 1.791319e-49 | 9.329993e-47 |
| MsG0180005657.01 | MsG0580026362.01 | 0.804270 | 2.341120e-49 | 1.201864e-46 |
| MsG0180005657.01 | MsG0580027095.01 | 0.808391 | 3.169003e-50 | 1.809791e-47 |
| MsG0180005657.01 | MsG0580029719.01 | 0.811064 | 8.436959e-51 | 5.171418e-48 |
| MsG0180005657.01 | MsG0680030441.01 | 0.834606 | 2.720287e-56 | 3.244511e-53 |
| MsG0180005657.01 | MsG0680030878.01 | 0.801032 | 1.090097e-48 | 5.153193e-46 |
| MsG0180005657.01 | MsG0680031204.01 | 0.812369 | 4.389894e-51 | 2.786004e-48 |
| MsG0180005657.01 | MsG0680033901.01 | 0.806260 | 8.967984e-50 | 4.845778e-47 |
| MsG0180005657.01 | MsG0680033902.01 | 0.815829 | 7.566461e-52 | 5.272662e-49 |
| MsG0180005657.01 | MsG0780036067.01 | 0.800313 | 1.528071e-48 | 7.092940e-46 |
| MsG0180005657.01 | MsG0780036583.01 | 0.805627 | 1.218143e-49 | 6.476118e-47 |
| MsG0180005657.01 | MsG0780037698.01 | 0.801977 | 6.981004e-49 | 3.379488e-46 |
| MsG0180005657.01 | MsG0780038834.01 | 0.814845 | 1.252115e-51 | 8.494187e-49 |
| MsG0180005657.01 | MsG0780039704.01 | 0.814949 | 1.187485e-51 | 8.078100e-49 |
| MsG0180005657.01 | MsG0780039839.01 | 0.812576 | 3.954183e-51 | 2.523329e-48 |
| MsG0180005657.01 | MsG0780039859.01 | 0.812397 | 4.327440e-51 | 2.748606e-48 |
| MsG0180005657.01 | MsG0780039860.01 | 0.829489 | 5.002908e-55 | 5.127891e-52 |
| MsG0180005657.01 | MsG0780039879.01 | 0.825136 | 5.526331e-54 | 4.994326e-51 |
| MsG0180005657.01 | MsG0780040073.01 | 0.813081 | 3.065139e-51 | 1.982228e-48 |
| MsG0180005657.01 | MsG0780040159.01 | 0.811332 | 7.382413e-51 | 4.556725e-48 |
| MsG0180005657.01 | MsG0780040319.01 | 0.801317 | 9.533207e-49 | 4.538856e-46 |
| MsG0180005657.01 | MsG0780040429.01 | 0.828575 | 8.329201e-55 | 8.312017e-52 |
| MsG0180005657.01 | MsG0780040437.01 | 0.811583 | 6.511925e-51 | 4.046231e-48 |
| MsG0180005657.01 | MsG0780040838.01 | 0.816243 | 6.115215e-52 | 4.310115e-49 |
| MsG0180005657.01 | MsG0780041478.01 | 0.830162 | 3.429047e-55 | 3.584189e-52 |
| MsG0180005657.01 | MsG0780041706.01 | 0.803346 | 3.642817e-49 | 1.826190e-46 |
| MsG0180005657.01 | MsG0880042043.01 | 0.839214 | 1.811027e-57 | 2.483943e-54 |
| MsG0180005657.01 | MsG0880042588.01 | 0.823564 | 1.294276e-53 | 1.118362e-50 |
| MsG0180005657.01 | MsG0880043069.01 | 0.832199 | 1.083409e-55 | 1.202333e-52 |
| MsG0180005657.01 | MsG0880043515.01 | 0.823258 | 1.526032e-53 | 1.307270e-50 |
| MsG0180005657.01 | MsG0880045073.01 | 0.815220 | 1.033430e-51 | 7.082125e-49 |
| MsG0180005657.01 | MsG0880045261.01 | 0.827306 | 1.682889e-54 | 1.618487e-51 |
| MsG0180005657.01 | MsG0880046105.01 | 0.802090 | 6.615527e-49 | 3.212026e-46 |
| MsG0180005657.01 | MsG0880046584.01 | 0.839322 | 1.698052e-57 | 2.336646e-54 |
| MsG0180005657.01 | MsG0880046639.01 | 0.834565 | 2.784480e-56 | 3.317199e-53 |
| MsG0180005657.01 | MsG0880047627.01 | 0.829647 | 4.578937e-55 | 4.715303e-52 |
| MsG0180005657.01 | MsG0880047669.01 | 0.818893 | 1.545491e-52 | 1.171566e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005657.01.T01 | MTR_1g105410 | 98.754 | 321 | 3 | 1 | 1 | 320 | 1 | 321 | 0.0 | 644 |
| MsG0180005657.01.T01 | MTR_5g039730 | 68.710 | 310 | 95 | 2 | 1 | 310 | 1 | 308 | 1.07e-150 | 426 |
| MsG0180005657.01.T01 | MTR_7g039810 | 67.816 | 261 | 82 | 2 | 1 | 261 | 1 | 259 | 1.14e-121 | 350 |
| MsG0180005657.01.T01 | MTR_7g445250 | 67.433 | 261 | 83 | 2 | 1 | 261 | 1 | 259 | 5.92e-121 | 348 |
| MsG0180005657.01.T01 | MTR_5g081910 | 26.899 | 316 | 182 | 6 | 24 | 303 | 21 | 323 | 2.78e-27 | 109 |
| MsG0180005657.01.T01 | MTR_5g081910 | 28.326 | 233 | 126 | 4 | 99 | 303 | 30 | 249 | 1.08e-22 | 95.5 |
| MsG0180005657.01.T01 | MTR_8g096050 | 29.333 | 300 | 173 | 13 | 12 | 298 | 228 | 501 | 3.64e-19 | 88.2 |
| MsG0180005657.01.T01 | MTR_8g076760 | 23.860 | 285 | 196 | 7 | 25 | 297 | 28 | 303 | 4.43e-19 | 86.3 |
| MsG0180005657.01.T01 | MTR_7g445270 | 70.000 | 50 | 15 | 0 | 1 | 50 | 1 | 50 | 1.05e-18 | 78.6 |
| MsG0180005657.01.T01 | MTR_1g036280 | 24.198 | 343 | 185 | 10 | 26 | 302 | 25 | 358 | 2.38e-17 | 82.0 |
| MsG0180005657.01.T01 | MTR_7g109135 | 24.503 | 302 | 200 | 7 | 8 | 297 | 19 | 304 | 1.18e-13 | 70.9 |
| MsG0180005657.01.T01 | MTR_7g109135 | 24.232 | 293 | 205 | 6 | 8 | 297 | 19 | 297 | 4.40e-13 | 69.3 |
| MsG0180005657.01.T01 | MTR_7g084400 | 27.425 | 299 | 177 | 14 | 12 | 298 | 214 | 484 | 4.60e-13 | 70.1 |
| MsG0180005657.01.T01 | MTR_3g104500 | 21.683 | 309 | 192 | 12 | 10 | 293 | 33 | 316 | 6.44e-13 | 68.9 |
| MsG0180005657.01.T01 | MTR_1g012030 | 23.569 | 297 | 190 | 10 | 7 | 293 | 135 | 404 | 3.24e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005657.01.T01 | AT3G05290 | 69.579 | 309 | 92 | 2 | 1 | 308 | 1 | 308 | 7.91e-158 | 444 |
| MsG0180005657.01.T01 | AT5G27520 | 69.231 | 312 | 92 | 3 | 1 | 310 | 3 | 312 | 1.13e-155 | 438 |
| MsG0180005657.01.T01 | AT2G39970 | 24.522 | 314 | 190 | 6 | 26 | 303 | 23 | 325 | 5.38e-26 | 105 |
| MsG0180005657.01.T01 | AT5G66380 | 23.077 | 299 | 210 | 6 | 10 | 297 | 9 | 298 | 8.37e-19 | 85.5 |
| MsG0180005657.01.T01 | AT4G32400 | 22.667 | 300 | 197 | 8 | 7 | 297 | 110 | 383 | 9.65e-13 | 68.9 |
| MsG0180005657.01.T01 | AT5G51050 | 26.667 | 300 | 178 | 12 | 12 | 298 | 224 | 494 | 2.78e-11 | 64.7 |
| MsG0180005657.01.T01 | AT1G34065 | 22.917 | 288 | 177 | 11 | 12 | 294 | 83 | 330 | 4.80e-11 | 63.5 |
| MsG0180005657.01.T01 | AT1G34065 | 22.917 | 288 | 177 | 11 | 12 | 294 | 76 | 323 | 5.00e-11 | 63.2 |
Find 92 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCAAGATGCTTTCAATT+TGG | 0.135005 | 1:-94564625 | None:intergenic |
| CTACTTTAAGAGACTATATT+TGG | 0.166458 | 1:+94563156 | MsG0180005657.01.T01:CDS |
| TCATTGTCTGAAGCTATTTC+TGG | 0.192958 | 1:+94562026 | MsG0180005657.01.T01:CDS |
| ACAAATGAAAATTCAAATAT+TGG | 0.224270 | 1:+94564790 | MsG0180005657.01.T01:three_prime_UTR |
| CTGGAGCACTCTATACTATT+TGG | 0.239300 | 1:+94564445 | MsG0180005657.01.T01:CDS |
| ATTCAAGATGCTTTCAATTT+GGG | 0.243894 | 1:-94564624 | None:intergenic |
| TTGAACTTCAGCTTGATATT+TGG | 0.253052 | 1:-94562105 | None:intergenic |
| TCGTCGTTTATTTATTTCTA+TGG | 0.253599 | 1:+94563127 | MsG0180005657.01.T01:CDS |
| AGGATGCAGACAAGTGAATT+TGG | 0.266292 | 1:+94563708 | MsG0180005657.01.T01:CDS |
| AACAACAAACCCATCTATTC+AGG | 0.272652 | 1:+94563812 | MsG0180005657.01.T01:CDS |
| CCTTGAGGATGCTGTATCTA+AGG | 0.273262 | 1:-94563688 | None:intergenic |
| GGGAAGTGAGGCACGATAAT+TGG | 0.278278 | 1:-94561904 | None:intergenic |
| AAGATCGTGTTTCTAAAATA+AGG | 0.288502 | 1:+94564762 | MsG0180005657.01.T01:three_prime_UTR |
| CTTTCATTGTACCAAGGCTT+GGG | 0.297703 | 1:+94563079 | MsG0180005657.01.T01:CDS |
| GAGAAAGCAGAAAGTGATTC+CGG | 0.301391 | 1:-94564022 | None:intergenic |
| AAGAGTGATACCTGAATAGA+TGG | 0.321223 | 1:-94563822 | None:intergenic |
| GTTAAGCACTTCCAATCATT+TGG | 0.332402 | 1:+94564910 | MsG0180005657.01.T01:three_prime_UTR |
| GAAGCTATTTCTGGGGCTAT+TGG | 0.341199 | 1:+94562035 | MsG0180005657.01.T01:CDS |
| TTATGAGTTAAGAGTTAGTT+AGG | 0.346754 | 1:-94561840 | None:intergenic |
| TTCAGCATTCGCCAAATGAT+TGG | 0.350365 | 1:-94564921 | None:intergenic |
| TGTTGTTAAAAGAATAGATA+TGG | 0.354667 | 1:-94563796 | None:intergenic |
| GCTTGACATACCCAGCTATC+AGG | 0.393298 | 1:+94564086 | MsG0180005657.01.T01:CDS |
| TAGGTGTAAAGTCACTATTC+AGG | 0.395494 | 1:+94564362 | MsG0180005657.01.T01:intron |
| TTGATAATCCACCTGATAGC+TGG | 0.413991 | 1:-94564097 | None:intergenic |
| CATTGTCTGAAGCTATTTCT+GGG | 0.423042 | 1:+94562027 | MsG0180005657.01.T01:CDS |
| TAATTATTTGTGATATGAAA+CGG | 0.437253 | 1:-94561925 | None:intergenic |
| AATTATTTGTGATATGAAAC+GGG | 0.437742 | 1:-94561924 | None:intergenic |
| TGGAAAAGAGAAGGCCTCTT+GGG | 0.439214 | 1:+94564465 | MsG0180005657.01.T01:CDS |
| GCTTTCATTGTACCAAGGCT+TGG | 0.441061 | 1:+94563078 | MsG0180005657.01.T01:CDS |
| TGGATTCTGATGCTCATCAT+TGG | 0.448309 | 1:+94564579 | MsG0180005657.01.T01:CDS |
| AAAATTGGCTTTGTTTGCTA+TGG | 0.449058 | 1:+94564692 | MsG0180005657.01.T01:three_prime_UTR |
| ATTGGCTTTGTTTGCTATGG+AGG | 0.460281 | 1:+94564695 | MsG0180005657.01.T01:three_prime_UTR |
| GCATTGAACGTAAGTGTTGC+TGG | 0.462957 | 1:+94564734 | MsG0180005657.01.T01:three_prime_UTR |
| TTGATTGCCGCTACTATGTC+CGG | 0.467353 | 1:+94563217 | MsG0180005657.01.T01:CDS |
| AGAAAGCAGAAAGTGATTCC+GGG | 0.471336 | 1:-94564021 | None:intergenic |
| TAACTAACTCTTAACTCATA+AGG | 0.471379 | 1:+94561842 | MsG0180005657.01.T01:five_prime_UTR |
| TTGGAAAAGAGAAGGCCTCT+TGG | 0.475034 | 1:+94564464 | MsG0180005657.01.T01:CDS |
| AAGGCGCAGAGGACAATCTC+TGG | 0.476185 | 1:+94564426 | MsG0180005657.01.T01:CDS |
| GCTGAAACACAGACTACTAA+AGG | 0.477004 | 1:+94563964 | MsG0180005657.01.T01:CDS |
| ATAAATAAACGACGAAATGA+AGG | 0.484849 | 1:-94563119 | None:intergenic |
| ACCTGGAGTGATGCATTTGA+TGG | 0.490024 | 1:+94563768 | MsG0180005657.01.T01:CDS |
| CAGCTCTGCATTACTTCTGA+TGG | 0.493278 | 1:+94564530 | MsG0180005657.01.T01:CDS |
| AGACCTTATCAGAGGGTACC+TGG | 0.496284 | 1:+94563751 | MsG0180005657.01.T01:CDS |
| ACTCCAGGTACCCTCTGATA+AGG | 0.497971 | 1:-94563754 | None:intergenic |
| TTGGAAAATCCAAGGGACTC+TGG | 0.499445 | 1:+94563727 | MsG0180005657.01.T01:CDS |
| CTGAAACACAGACTACTAAA+GGG | 0.499748 | 1:+94563965 | MsG0180005657.01.T01:CDS |
| GGAAGCAATTTCTAAACGTC+AGG | 0.508035 | 1:+94563054 | MsG0180005657.01.T01:CDS |
| TAAGGTCTGCCAGAGTCCCT+TGG | 0.511250 | 1:-94563736 | None:intergenic |
| GAGTACAGAAGCTGAAAAGA+AGG | 0.511723 | 1:+94564407 | MsG0180005657.01.T01:CDS |
| CCAGCCATCAAAGAAAATAC+AGG | 0.513015 | 1:+94562129 | MsG0180005657.01.T01:CDS |
| GAAAATCATATTATCAGAAG+AGG | 0.517665 | 1:-94564819 | None:intergenic |
| ACAAGACGGTGGTGCTAACA+AGG | 0.523486 | 1:-94562061 | None:intergenic |
| TTCCGGGGATGACTTTGCAT+CGG | 0.531292 | 1:-94564005 | None:intergenic |
| TGCATTACTTCTGATGGTAA+AGG | 0.540385 | 1:+94564536 | MsG0180005657.01.T01:CDS |
| TAAACGACGAAATGAAGGAT+TGG | 0.543647 | 1:-94563114 | None:intergenic |
| TTCAAGATGCTTTCAATTTG+GGG | 0.544526 | 1:-94564623 | None:intergenic |
| CAAGATGCTTTCAATTTGGG+GGG | 0.545334 | 1:-94564621 | None:intergenic |
| GAACGAAGAATGAATAGAGT+AGG | 0.545583 | 1:-94561964 | None:intergenic |
| CTTGAGGATGCTGTATCTAA+GGG | 0.556289 | 1:-94563687 | None:intergenic |
| AAAAGTGGAAACAAGAACAT+TGG | 0.557206 | 1:+94563181 | MsG0180005657.01.T01:CDS |
| TTCACTTGTCTGCATCCTTG+AGG | 0.559298 | 1:-94563703 | None:intergenic |
| AAGTGAATTTGGAAAATCCA+AGG | 0.561327 | 1:+94563719 | MsG0180005657.01.T01:CDS |
| AACCGATGCAAAGTCATCCC+CGG | 0.568341 | 1:+94564003 | MsG0180005657.01.T01:CDS |
| ACCATCAAATGCATCACTCC+AGG | 0.576816 | 1:-94563769 | None:intergenic |
| TGATAATCCACCTGATAGCT+GGG | 0.581837 | 1:-94564096 | None:intergenic |
| TTGGATGAATTGAATCCTCA+TGG | 0.582535 | 1:-94561885 | None:intergenic |
| GAATTGAATCCTCATGGTCA+TGG | 0.587426 | 1:-94561879 | None:intergenic |
| TATACTATTTGGAAAAGAGA+AGG | 0.590261 | 1:+94564456 | MsG0180005657.01.T01:CDS |
| TTTCATTGTACCAAGGCTTG+GGG | 0.595728 | 1:+94563080 | MsG0180005657.01.T01:CDS |
| TCAAGATGCTTTCAATTTGG+GGG | 0.597677 | 1:-94564622 | None:intergenic |
| CTAACTCTTAACTCATAAGG+TGG | 0.610380 | 1:+94561845 | MsG0180005657.01.T01:five_prime_UTR |
| CCTTAGATACAGCATCCTCA+AGG | 0.614597 | 1:+94563688 | MsG0180005657.01.T01:CDS |
| GTGATATGAAACGGGAAGTG+AGG | 0.614905 | 1:-94561916 | None:intergenic |
| AGTGAATTTGGAAAATCCAA+GGG | 0.635743 | 1:+94563720 | MsG0180005657.01.T01:CDS |
| AGAAGATCACAAAGTCGACA+TGG | 0.636206 | 1:+94564559 | MsG0180005657.01.T01:CDS |
| CAGGTGCTTTCATTGTACCA+AGG | 0.638706 | 1:+94563073 | MsG0180005657.01.T01:CDS |
| CTCTGGCAGACCTTATCAGA+GGG | 0.640935 | 1:+94563744 | MsG0180005657.01.T01:CDS |
| AAGCTGAAAAGAAGGCGCAG+AGG | 0.642022 | 1:+94564415 | MsG0180005657.01.T01:CDS |
| ATTGTCTGAAGCTATTTCTG+GGG | 0.648570 | 1:+94562028 | MsG0180005657.01.T01:CDS |
| CTGTACAATACTAATAACAC+AGG | 0.650569 | 1:+94563243 | MsG0180005657.01.T01:CDS |
| GAAAGCAGAAAGTGATTCCG+GGG | 0.652721 | 1:-94564020 | None:intergenic |
| AGAGTGATACCTGAATAGAT+GGG | 0.654045 | 1:-94563821 | None:intergenic |
| GCTCTCTCGCCATGACCATG+AGG | 0.658217 | 1:+94561870 | MsG0180005657.01.T01:five_prime_UTR |
| ACTCTGGCAGACCTTATCAG+AGG | 0.672915 | 1:+94563743 | MsG0180005657.01.T01:CDS |
| GCAATAGCAAGTCTACGTCA+AGG | 0.675067 | 1:-94564858 | None:intergenic |
| AGTATCAAGTGGATACAAGA+CGG | 0.683516 | 1:-94562075 | None:intergenic |
| TATTAGTATTGTACAGACGC+CGG | 0.694097 | 1:-94563236 | None:intergenic |
| CAAGACGGTGGTGCTAACAA+GGG | 0.715250 | 1:-94562060 | None:intergenic |
| TTGCTATGGAGGTAAAAGAG+CGG | 0.721282 | 1:+94564706 | MsG0180005657.01.T01:three_prime_UTR |
| ACAGACGCCGGACATAGTAG+CGG | 0.747106 | 1:-94563224 | None:intergenic |
| ATCAAGTGGATACAAGACGG+TGG | 0.749245 | 1:-94562072 | None:intergenic |
| TTGAACGTAAGTGTTGCTGG+CGG | 0.779699 | 1:+94564737 | MsG0180005657.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAATATCATTTTTTAACT+TGG | - | Chr1:94564950-94564969 | MsG0180005656.01.T01:three_prime_UTR | 10.0% |
| !! | AATCTAGAGATAAATAATTT+AGG | - | Chr1:94564123-94564142 | None:intergenic | 15.0% |
| !! | ACAAATGAAAATTCAAATAT+TGG | + | Chr1:94564790-94564809 | MsG0180005657.01.T01:three_prime_UTR | 15.0% |
| !! | AGTTAATAGTAAAATTCAAA+AGG | + | Chr1:94564193-94564212 | MsG0180005657.01.T01:intron | 15.0% |
| !! | ATACAAAACTACTAAAAAAA+AGG | - | Chr1:94564889-94564908 | None:intergenic | 15.0% |
| !! | ATTTAATCATATGCAAAAAT+TGG | + | Chr1:94564677-94564696 | MsG0180005657.01.T01:three_prime_UTR | 15.0% |
| !! | TAATTATTTGTGATATGAAA+CGG | - | Chr1:94561928-94561947 | None:intergenic | 15.0% |
| !! | TATAATTCATGAAACAATTT+AGG | + | Chr1:94562193-94562212 | MsG0180005657.01.T01:intron | 15.0% |
| !! | TTGAAATTAAGTTTATCAAA+GGG | + | Chr1:94563371-94563390 | MsG0180005657.01.T01:intron | 15.0% |
| !!! | ACTTAATTTCAAGTTAATTT+AGG | - | Chr1:94563363-94563382 | None:intergenic | 15.0% |
| !!! | CTTAATTTCAAGTTAATTTA+GGG | - | Chr1:94563362-94563381 | None:intergenic | 15.0% |
| !!! | TAATTGAAAAGTACAATATT+TGG | + | Chr1:94563420-94563439 | MsG0180005657.01.T01:intron | 15.0% |
| !!! | TTTATCATATTGTTTTATTG+TGG | + | Chr1:94562959-94562978 | MsG0180005657.01.T01:intron | 15.0% |
| !!! | TTTTGAATTTTACTATTAAC+TGG | - | Chr1:94564194-94564213 | None:intergenic | 15.0% |
| !! | AATTATTTGTGATATGAAAC+GGG | - | Chr1:94561927-94561946 | None:intergenic | 20.0% |
| !! | ATGTAGTTTATGAAAAAAAC+AGG | + | Chr1:94562585-94562604 | MsG0180005657.01.T01:intron | 20.0% |
| !! | CAAAAGAAAACTTGTAATAT+TGG | - | Chr1:94562937-94562956 | None:intergenic | 20.0% |
| !! | CTTGAAATTAAGTTTATCAA+AGG | + | Chr1:94563370-94563389 | MsG0180005657.01.T01:intron | 20.0% |
| !! | TAATTAGCCAATAATCAATT+TGG | - | Chr1:94562175-94562194 | None:intergenic | 20.0% |
| !! | TGTTGTTAAAAGAATAGATA+TGG | - | Chr1:94563799-94563818 | None:intergenic | 20.0% |
| !!! | TAAATTTTTTCACAGATATG+TGG | + | Chr1:94564233-94564252 | MsG0180005657.01.T01:intron | 20.0% |
| !!! | TGCATTTTTATCAGAAATAT+TGG | - | Chr1:94561993-94562012 | None:intergenic | 20.0% |
| !!! | TGTGTTAATATACAGATTTT+GGG | + | Chr1:94564149-94564168 | MsG0180005657.01.T01:intron | 20.0% |
| !!! | TTTGAAGATATAATTTGTGT+TGG | + | Chr1:94562609-94562628 | MsG0180005657.01.T01:intron | 20.0% |
| ! | AATCTGCAAAGAAAACAAAT+TGG | + | Chr1:94563578-94563597 | MsG0180005657.01.T01:intron | 25.0% |
| ! | AATTCAAGATGCTTTCAATT+TGG | - | Chr1:94564628-94564647 | None:intergenic | 25.0% |
| ! | AGAATCAATTATTCCAGATT+AGG | + | Chr1:94563875-94563894 | MsG0180005657.01.T01:intron | 25.0% |
| ! | AGACTATATTTGGAAAAAAG+TGG | + | Chr1:94563166-94563185 | MsG0180005657.01.T01:CDS | 25.0% |
| ! | ATAAATAAACGACGAAATGA+AGG | - | Chr1:94563122-94563141 | None:intergenic | 25.0% |
| ! | ATTCAAGATGCTTTCAATTT+GGG | - | Chr1:94564627-94564646 | None:intergenic | 25.0% |
| ! | CAAAAATAAGCCAATACAAA+CGG | + | Chr1:94562693-94562712 | MsG0180005657.01.T01:intron | 25.0% |
| ! | CTACAATTAAAGAGAAAATG+TGG | - | Chr1:94562811-94562830 | None:intergenic | 25.0% |
| ! | GAAAATCATATTATCAGAAG+AGG | - | Chr1:94564822-94564841 | None:intergenic | 25.0% |
| ! | TAACTAACTCTTAACTCATA+AGG | + | Chr1:94561842-94561861 | MsG0180005657.01.T01:five_prime_UTR | 25.0% |
| ! | TATACTATTTGGAAAAGAGA+AGG | + | Chr1:94564456-94564475 | MsG0180005657.01.T01:CDS | 25.0% |
| ! | TGAATGTTATCATTACCATT+TGG | - | Chr1:94562909-94562928 | None:intergenic | 25.0% |
| ! | TGACATACTTATTTGTGATA+TGG | + | Chr1:94563307-94563326 | MsG0180005657.01.T01:intron | 25.0% |
| ! | TTATGAGTTAAGAGTTAGTT+AGG | - | Chr1:94561843-94561862 | None:intergenic | 25.0% |
| ! | TTTACTATTAACTGGAATCA+TGG | - | Chr1:94564186-94564205 | None:intergenic | 25.0% |
| !! | AATATGATTTTCTGTCATCA+AGG | + | Chr1:94564830-94564849 | MsG0180005657.01.T01:three_prime_UTR | 25.0% |
| !! | AGGAAAACAAATGATAATGT+CGG | + | Chr1:94562337-94562356 | MsG0180005657.01.T01:intron | 25.0% |
| !! | ATAACCTGTATTTTCTTTGA+TGG | - | Chr1:94562136-94562155 | None:intergenic | 25.0% |
| !! | CTACTTTAAGAGACTATATT+TGG | + | Chr1:94563156-94563175 | MsG0180005657.01.T01:CDS | 25.0% |
| !! | CTGTGTTAATATACAGATTT+TGG | + | Chr1:94564148-94564167 | MsG0180005657.01.T01:intron | 25.0% |
| !! | CTTTAAGAACATCTTGTATT+TGG | + | Chr1:94562371-94562390 | MsG0180005657.01.T01:intron | 25.0% |
| !! | GAGAATTTCTGATGTTTTAT+GGG | + | Chr1:94563033-94563052 | MsG0180005657.01.T01:CDS | 25.0% |
| !!! | AAGATCGTGTTTCTAAAATA+AGG | + | Chr1:94564762-94564781 | MsG0180005657.01.T01:three_prime_UTR | 25.0% |
| !!! | ACAGGTTATTTTCCTTTTAT+TGG | + | Chr1:94562147-94562166 | MsG0180005657.01.T01:intron | 25.0% |
| !!! | AGATGTTTTGAATTTCCAAT+AGG | + | Chr1:94564343-94564362 | MsG0180005657.01.T01:intron | 25.0% |
| !!! | ATTTTTTACCAAATACAGAC+AGG | - | Chr1:94562245-94562264 | None:intergenic | 25.0% |
| !!! | CAGGTTATTTTCCTTTTATT+GGG | + | Chr1:94562148-94562167 | MsG0180005657.01.T01:intron | 25.0% |
| !!! | TCGTCGTTTATTTATTTCTA+TGG | + | Chr1:94563127-94563146 | MsG0180005657.01.T01:CDS | 25.0% |
| AAAAGTGGAAACAAGAACAT+TGG | + | Chr1:94563181-94563200 | MsG0180005657.01.T01:CDS | 30.0% | |
| AAGTGAATTTGGAAAATCCA+AGG | + | Chr1:94563719-94563738 | MsG0180005657.01.T01:CDS | 30.0% | |
| AATAGTGACTTTACACCTAT+TGG | - | Chr1:94564361-94564380 | None:intergenic | 30.0% | |
| ACGAAAACATCTTACAGTTT+AGG | + | Chr1:94562771-94562790 | MsG0180005657.01.T01:intron | 30.0% | |
| AGAACATCTTGTATTTGGAT+TGG | + | Chr1:94562376-94562395 | MsG0180005657.01.T01:intron | 30.0% | |
| AGTGAATTTGGAAAATCCAA+GGG | + | Chr1:94563720-94563739 | MsG0180005657.01.T01:CDS | 30.0% | |
| ATCAATTTGGACCCAATAAA+AGG | - | Chr1:94562162-94562181 | None:intergenic | 30.0% | |
| ATTGGGTCCAAATTGATTAT+TGG | + | Chr1:94562165-94562184 | MsG0180005657.01.T01:intron | 30.0% | |
| CTGTACAATACTAATAACAC+AGG | + | Chr1:94563243-94563262 | MsG0180005657.01.T01:CDS | 30.0% | |
| CTTATCACAATAACTACTCT+AGG | + | Chr1:94562467-94562486 | MsG0180005657.01.T01:intron | 30.0% | |
| TCAATTAATGTCATGTTTGC+AGG | - | Chr1:94563407-94563426 | None:intergenic | 30.0% | |
| TCATATAGTGTAACCTAATC+TGG | - | Chr1:94563891-94563910 | None:intergenic | 30.0% | |
| TTATTGTGGCAAGATTAACA+AGG | + | Chr1:94562973-94562992 | MsG0180005657.01.T01:intron | 30.0% | |
| TTCAAGATGCTTTCAATTTG+GGG | - | Chr1:94564626-94564645 | None:intergenic | 30.0% | |
| TTGAACTTCAGCTTGATATT+TGG | - | Chr1:94562108-94562127 | None:intergenic | 30.0% | |
| ! | ATTTAGGTTAAGTGTGTGTT+TGG | + | Chr1:94562209-94562228 | MsG0180005657.01.T01:intron | 30.0% |
| ! | GGAGAATTTCTGATGTTTTA+TGG | + | Chr1:94563032-94563051 | MsG0180005657.01.T01:intron | 30.0% |
| !! | AAAATTGGCTTTGTTTGCTA+TGG | + | Chr1:94564692-94564711 | MsG0180005657.01.T01:three_prime_UTR | 30.0% |
| !!! | TTGGTTTTACAAGTATCAAG+TGG | - | Chr1:94562089-94562108 | None:intergenic | 30.0% |
| AAACATCTTTCATCAGCATG+TGG | - | Chr1:94564331-94564350 | None:intergenic | 35.0% | |
| AACAACAAACCCATCTATTC+AGG | + | Chr1:94563812-94563831 | MsG0180005657.01.T01:CDS | 35.0% | |
| AAGAGTGATACCTGAATAGA+TGG | - | Chr1:94563825-94563844 | None:intergenic | 35.0% | |
| AGAGTGATACCTGAATAGAT+GGG | - | Chr1:94563824-94563843 | None:intergenic | 35.0% | |
| AGTATCAAGTGGATACAAGA+CGG | - | Chr1:94562078-94562097 | None:intergenic | 35.0% | |
| ATCCATTGAAAAATCCCAAG+AGG | - | Chr1:94564482-94564501 | None:intergenic | 35.0% | |
| ATCCTTGTCTAAAAAGAACG+CGG | + | Chr1:94563519-94563538 | MsG0180005657.01.T01:intron | 35.0% | |
| ATCTTTAGCAGAACTAGGTA+CGG | + | Chr1:94563470-94563489 | MsG0180005657.01.T01:intron | 35.0% | |
| CAGCAAGGAAATAATGAGTT+TGG | - | Chr1:94563628-94563647 | None:intergenic | 35.0% | |
| CTAACTCTTAACTCATAAGG+TGG | + | Chr1:94561845-94561864 | MsG0180005657.01.T01:five_prime_UTR | 35.0% | |
| CTGAAACACAGACTACTAAA+GGG | + | Chr1:94563965-94563984 | MsG0180005657.01.T01:CDS | 35.0% | |
| CTTATCACAATAACTACTCC+AGG | + | Chr1:94562741-94562760 | MsG0180005657.01.T01:intron | 35.0% | |
| GAACGAAGAATGAATAGAGT+AGG | - | Chr1:94561967-94561986 | None:intergenic | 35.0% | |
| GTTAAGCACTTCCAATCATT+TGG | + | Chr1:94564910-94564929 | MsG0180005657.01.T01:three_prime_UTR | 35.0% | |
| GTTGTTGCTCTATCTTATGT+AGG | + | Chr1:94563011-94563030 | MsG0180005657.01.T01:intron | 35.0% | |
| TAAACGACGAAATGAAGGAT+TGG | - | Chr1:94563117-94563136 | None:intergenic | 35.0% | |
| TAGGTGTAAAGTCACTATTC+AGG | + | Chr1:94564362-94564381 | MsG0180005657.01.T01:intron | 35.0% | |
| TATTAGTATTGTACAGACGC+CGG | - | Chr1:94563239-94563258 | None:intergenic | 35.0% | |
| TCAAGATGCTTTCAATTTGG+GGG | - | Chr1:94564625-94564644 | None:intergenic | 35.0% | |
| TGACATACATCCGTTTGTAT+TGG | - | Chr1:94562706-94562725 | None:intergenic | 35.0% | |
| TGCATTACTTCTGATGGTAA+AGG | + | Chr1:94564536-94564555 | MsG0180005657.01.T01:CDS | 35.0% | |
| TTAATGTCATGTTTGCAGGA+CGG | - | Chr1:94563403-94563422 | None:intergenic | 35.0% | |
| TTGGATGAATTGAATCCTCA+TGG | - | Chr1:94561888-94561907 | None:intergenic | 35.0% | |
| ! | CAAATGATAATGTCGGTGTT+TGG | + | Chr1:94562344-94562363 | MsG0180005657.01.T01:intron | 35.0% |
| ! | GATGTTTTCGTAAACTATCC+TGG | - | Chr1:94562762-94562781 | None:intergenic | 35.0% |
| ! | TCATTGTCTGAAGCTATTTC+TGG | + | Chr1:94562026-94562045 | MsG0180005657.01.T01:CDS | 35.0% |
| !! | ATTGTCTGAAGCTATTTCTG+GGG | + | Chr1:94562028-94562047 | MsG0180005657.01.T01:CDS | 35.0% |
| !! | CACTATGAAGTATTGTTCAG+TGG | + | Chr1:94562314-94562333 | MsG0180005657.01.T01:intron | 35.0% |
| !! | CATTGTCTGAAGCTATTTCT+GGG | + | Chr1:94562027-94562046 | MsG0180005657.01.T01:CDS | 35.0% |
| !! | CTCATTATTTCCTTGCTGTT+AGG | + | Chr1:94563630-94563649 | MsG0180005657.01.T01:intron | 35.0% |
| !! | GCTTTCTCTGCTTTTATGTT+GGG | + | Chr1:94564037-94564056 | MsG0180005657.01.T01:CDS | 35.0% |
| !! | TATGAAGTATTGTTCAGTGG+AGG | + | Chr1:94562317-94562336 | MsG0180005657.01.T01:intron | 35.0% |
| !! | TGCTTTCTCTGCTTTTATGT+TGG | + | Chr1:94564036-94564055 | MsG0180005657.01.T01:CDS | 35.0% |
| ACTCGATCTTTAGCAGAACT+AGG | + | Chr1:94563465-94563484 | MsG0180005657.01.T01:intron | 40.0% | |
| AGAAAGCAGAAAGTGATTCC+GGG | - | Chr1:94564024-94564043 | None:intergenic | 40.0% | |
| AGAAGATCACAAAGTCGACA+TGG | + | Chr1:94564559-94564578 | MsG0180005657.01.T01:CDS | 40.0% | |
| AGATTATGCACCTAACAGCA+AGG | - | Chr1:94563643-94563662 | None:intergenic | 40.0% | |
| AGGATGCAGACAAGTGAATT+TGG | + | Chr1:94563708-94563727 | MsG0180005657.01.T01:CDS | 40.0% | |
| CAAGATGCTTTCAATTTGGG+GGG | - | Chr1:94564624-94564643 | None:intergenic | 40.0% | |
| CCAGCCATCAAAGAAAATAC+AGG | + | Chr1:94562129-94562148 | MsG0180005657.01.T01:CDS | 40.0% | |
| CTTGAGGATGCTGTATCTAA+GGG | - | Chr1:94563690-94563709 | None:intergenic | 40.0% | |
| CTTTCATTGTACCAAGGCTT+GGG | + | Chr1:94563079-94563098 | MsG0180005657.01.T01:CDS | 40.0% | |
| GAATTGAATCCTCATGGTCA+TGG | - | Chr1:94561882-94561901 | None:intergenic | 40.0% | |
| GAGAAAGCAGAAAGTGATTC+CGG | - | Chr1:94564025-94564044 | None:intergenic | 40.0% | |
| GAGTACAGAAGCTGAAAAGA+AGG | + | Chr1:94564407-94564426 | MsG0180005657.01.T01:CDS | 40.0% | |
| GATCGAATGCAGTATACTGT+TGG | - | Chr1:94563943-94563962 | None:intergenic | 40.0% | |
| GCTGAAACACAGACTACTAA+AGG | + | Chr1:94563964-94563983 | MsG0180005657.01.T01:CDS | 40.0% | |
| GGAAGCAATTTCTAAACGTC+AGG | + | Chr1:94563054-94563073 | MsG0180005657.01.T01:CDS | 40.0% | |
| GGTTTCTGCAGATGTATCTT+GGG | + | Chr1:94564254-94564273 | MsG0180005657.01.T01:intron | 40.0% | |
| TAGAGACTCCTGTCTGTATT+TGG | + | Chr1:94562234-94562253 | MsG0180005657.01.T01:intron | 40.0% | |
| TGATAATCCACCTGATAGCT+GGG | - | Chr1:94564099-94564118 | None:intergenic | 40.0% | |
| TGGATTCTGATGCTCATCAT+TGG | + | Chr1:94564579-94564598 | MsG0180005657.01.T01:CDS | 40.0% | |
| TGGTTTCTGCAGATGTATCT+TGG | + | Chr1:94564253-94564272 | MsG0180005657.01.T01:intron | 40.0% | |
| TTCAGCATTCGCCAAATGAT+TGG | - | Chr1:94564924-94564943 | None:intergenic | 40.0% | |
| TTGCTATGGAGGTAAAAGAG+CGG | + | Chr1:94564706-94564725 | MsG0180005657.01.T01:three_prime_UTR | 40.0% | |
| TTTCATTGTACCAAGGCTTG+GGG | + | Chr1:94563080-94563099 | MsG0180005657.01.T01:CDS | 40.0% | |
| ! | AACCGCGTTCTTTTTAGACA+AGG | - | Chr1:94563524-94563543 | None:intergenic | 40.0% |
| ! | CTGGAGCACTCTATACTATT+TGG | + | Chr1:94564445-94564464 | MsG0180005657.01.T01:CDS | 40.0% |
| ! | TTGATAATCCACCTGATAGC+TGG | - | Chr1:94564100-94564119 | None:intergenic | 40.0% |
| !! | ATTGGCTTTGTTTGCTATGG+AGG | + | Chr1:94564695-94564714 | MsG0180005657.01.T01:three_prime_UTR | 40.0% |
| !! | CCTGTATTTTCTTTGATGGC+TGG | - | Chr1:94562132-94562151 | None:intergenic | 40.0% |
| !!! | GGGATTTTTCAATGGATTGC+AGG | + | Chr1:94564485-94564504 | MsG0180005657.01.T01:CDS | 40.0% |
| ACCATCAAATGCATCACTCC+AGG | - | Chr1:94563772-94563791 | None:intergenic | 45.0% | |
| ACCTGGAGTGATGCATTTGA+TGG | + | Chr1:94563768-94563787 | MsG0180005657.01.T01:CDS | 45.0% | |
| ATCAAGTGGATACAAGACGG+TGG | - | Chr1:94562075-94562094 | None:intergenic | 45.0% | |
| CAGCTCTGCATTACTTCTGA+TGG | + | Chr1:94564530-94564549 | MsG0180005657.01.T01:CDS | 45.0% | |
| CAGGTGCTTTCATTGTACCA+AGG | + | Chr1:94563073-94563092 | MsG0180005657.01.T01:CDS | 45.0% | |
| CCTTAGATACAGCATCCTCA+AGG | + | Chr1:94563688-94563707 | MsG0180005657.01.T01:CDS | 45.0% | |
| CCTTGAGGATGCTGTATCTA+AGG | - | Chr1:94563691-94563710 | None:intergenic | 45.0% | |
| CGAATGCAGTATACTGTTGG+AGG | - | Chr1:94563940-94563959 | None:intergenic | 45.0% | |
| GAAAGCAGAAAGTGATTCCG+GGG | - | Chr1:94564023-94564042 | None:intergenic | 45.0% | |
| GCAATAGCAAGTCTACGTCA+AGG | - | Chr1:94564861-94564880 | None:intergenic | 45.0% | |
| GCTTTCATTGTACCAAGGCT+TGG | + | Chr1:94563078-94563097 | MsG0180005657.01.T01:CDS | 45.0% | |
| GTGATATGAAACGGGAAGTG+AGG | - | Chr1:94561919-94561938 | None:intergenic | 45.0% | |
| TGCTTTCAATTTGGGGGGAT+TGG | - | Chr1:94564619-94564638 | None:intergenic | 45.0% | |
| TGGAAAAGAGAAGGCCTCTT+GGG | + | Chr1:94564465-94564484 | MsG0180005657.01.T01:CDS | 45.0% | |
| TTCACTTGTCTGCATCCTTG+AGG | - | Chr1:94563706-94563725 | None:intergenic | 45.0% | |
| TTGATTGCCGCTACTATGTC+CGG | + | Chr1:94563217-94563236 | MsG0180005657.01.T01:CDS | 45.0% | |
| TTGGAAAAGAGAAGGCCTCT+TGG | + | Chr1:94564464-94564483 | MsG0180005657.01.T01:CDS | 45.0% | |
| TTGGAAAATCCAAGGGACTC+TGG | + | Chr1:94563727-94563746 | MsG0180005657.01.T01:CDS | 45.0% | |
| ! | GCATTGAACGTAAGTGTTGC+TGG | + | Chr1:94564734-94564753 | MsG0180005657.01.T01:three_prime_UTR | 45.0% |
| ! | TTGAACGTAAGTGTTGCTGG+CGG | + | Chr1:94564737-94564756 | MsG0180005657.01.T01:three_prime_UTR | 45.0% |
| !! | GAAGCTATTTCTGGGGCTAT+TGG | + | Chr1:94562035-94562054 | MsG0180005657.01.T01:CDS | 45.0% |
| !! | GGCCTCTTGGGATTTTTCAA+TGG | + | Chr1:94564477-94564496 | MsG0180005657.01.T01:CDS | 45.0% |
| !!! | CATTTTTTGTCCCCAAGCCT+TGG | - | Chr1:94563093-94563112 | None:intergenic | 45.0% |
| AACCGATGCAAAGTCATCCC+CGG | + | Chr1:94564003-94564022 | MsG0180005657.01.T01:CDS | 50.0% | |
| ACTCCAGGTACCCTCTGATA+AGG | - | Chr1:94563757-94563776 | None:intergenic | 50.0% | |
| ACTCTGGCAGACCTTATCAG+AGG | + | Chr1:94563743-94563762 | MsG0180005657.01.T01:CDS | 50.0% | |
| CAAACGCACACGATGCCAAA+TGG | + | Chr1:94562891-94562910 | MsG0180005657.01.T01:intron | 50.0% | |
| CATTTGGCATCGTGTGCGTT+TGG | - | Chr1:94562893-94562912 | None:intergenic | 50.0% | |
| CTCTGGCAGACCTTATCAGA+GGG | + | Chr1:94563744-94563763 | MsG0180005657.01.T01:CDS | 50.0% | |
| GCTTGACATACCCAGCTATC+AGG | + | Chr1:94564086-94564105 | MsG0180005657.01.T01:CDS | 50.0% | |
| GGGAAGTGAGGCACGATAAT+TGG | - | Chr1:94561907-94561926 | None:intergenic | 50.0% | |
| TGACATACCCAGCTATCAGG+TGG | + | Chr1:94564089-94564108 | MsG0180005657.01.T01:intron | 50.0% | |
| TTCCGGGGATGACTTTGCAT+CGG | - | Chr1:94564008-94564027 | None:intergenic | 50.0% | |
| ! | AAGCTGAAAAGAAGGCGCAG+AGG | + | Chr1:94564415-94564434 | MsG0180005657.01.T01:CDS | 50.0% |
| ! | ACAAGACGGTGGTGCTAACA+AGG | - | Chr1:94562064-94562083 | None:intergenic | 50.0% |
| ! | CAAGACGGTGGTGCTAACAA+GGG | - | Chr1:94562063-94562082 | None:intergenic | 50.0% |
| !! | AGACCTTATCAGAGGGTACC+TGG | + | Chr1:94563751-94563770 | MsG0180005657.01.T01:CDS | 50.0% |
| AAGGCGCAGAGGACAATCTC+TGG | + | Chr1:94564426-94564445 | MsG0180005657.01.T01:CDS | 55.0% | |
| ACAGACGCCGGACATAGTAG+CGG | - | Chr1:94563227-94563246 | None:intergenic | 55.0% | |
| CATCAGCGCAGCACGTGTTT+GGG | + | Chr1:94562399-94562418 | MsG0180005657.01.T01:intron | 55.0% | |
| TAAGGTCTGCCAGAGTCCCT+TGG | - | Chr1:94563739-94563758 | None:intergenic | 55.0% | |
| GCATCAGCGCAGCACGTGTT+TGG | + | Chr1:94562398-94562417 | MsG0180005657.01.T01:intron | 60.0% | |
| GCTCTCTCGCCATGACCATG+AGG | + | Chr1:94561870-94561889 | MsG0180005657.01.T01:five_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 94561836 | 94564984 | 94561836 | ID=MsG0180005657.01;Name=MsG0180005657.01 |
| Chr1 | mRNA | 94561836 | 94564984 | 94561836 | ID=MsG0180005657.01.T01;Parent=MsG0180005657.01;Name=MsG0180005657.01.T01;_AED=0.32;_eAED=0.32;_QI=172|1|1|1|0.5|0.4|5|340|320 |
| Chr1 | exon | 94561836 | 94562150 | 94561836 | ID=MsG0180005657.01.T01:exon:10234;Parent=MsG0180005657.01.T01 |
| Chr1 | exon | 94563033 | 94563264 | 94563033 | ID=MsG0180005657.01.T01:exon:10235;Parent=MsG0180005657.01.T01 |
| Chr1 | exon | 94563687 | 94563833 | 94563687 | ID=MsG0180005657.01.T01:exon:10236;Parent=MsG0180005657.01.T01 |
| Chr1 | exon | 94563947 | 94564107 | 94563947 | ID=MsG0180005657.01.T01:exon:10237;Parent=MsG0180005657.01.T01 |
| Chr1 | exon | 94564365 | 94564984 | 94564365 | ID=MsG0180005657.01.T01:exon:10238;Parent=MsG0180005657.01.T01 |
| Chr1 | five_prime_UTR | 94561836 | 94562007 | 94561836 | ID=MsG0180005657.01.T01:five_prime_utr;Parent=MsG0180005657.01.T01 |
| Chr1 | CDS | 94562008 | 94562150 | 94562008 | ID=MsG0180005657.01.T01:cds;Parent=MsG0180005657.01.T01 |
| Chr1 | CDS | 94563033 | 94563264 | 94563033 | ID=MsG0180005657.01.T01:cds;Parent=MsG0180005657.01.T01 |
| Chr1 | CDS | 94563687 | 94563833 | 94563687 | ID=MsG0180005657.01.T01:cds;Parent=MsG0180005657.01.T01 |
| Chr1 | CDS | 94563947 | 94564107 | 94563947 | ID=MsG0180005657.01.T01:cds;Parent=MsG0180005657.01.T01 |
| Chr1 | CDS | 94564365 | 94564644 | 94564365 | ID=MsG0180005657.01.T01:cds;Parent=MsG0180005657.01.T01 |
| Chr1 | three_prime_UTR | 94564645 | 94564984 | 94564645 | ID=MsG0180005657.01.T01:three_prime_utr;Parent=MsG0180005657.01.T01 |
| Gene Sequence |
| Protein sequence |
