AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042588.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042588.01.T01 MTR_8g017270 93.391 348 15 2 1 347 1 341 0.0 660
MsG0880042588.01.T01 MTR_2g018660 40.367 327 163 13 44 347 3 320 3.15e-62 201
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042588.01.T01 AT3G13800 69.075 346 90 4 12 347 23 361 4.21e-171 480
MsG0880042588.01.T01 AT3G13800 69.075 346 90 4 12 347 23 361 4.21e-171 480
MsG0880042588.01.T01 AT3G13800 77.972 286 55 2 63 347 1 279 6.61e-166 464
MsG0880042588.01.T01 AT3G13800 77.972 286 55 2 63 347 1 279 6.61e-166 464
MsG0880042588.01.T01 AT1G30300 37.888 322 169 12 49 347 11 324 3.92e-56 186
MsG0880042588.01.T01 AT1G30300 37.888 322 169 12 49 347 11 324 3.92e-56 186
MsG0880042588.01.T01 AT1G30300 37.888 322 169 12 49 347 11 324 3.92e-56 186
MsG0880042588.01.T01 AT1G30300 37.888 322 169 12 49 347 11 324 3.92e-56 186
MsG0880042588.01.T01 AT4G03610 38.318 321 158 13 56 347 9 318 1.46e-52 176
MsG0880042588.01.T01 AT4G03610 36.137 321 150 13 56 347 9 303 7.70e-45 156
MsG0880042588.01.T01 AT4G03610 38.163 283 135 13 56 309 9 280 2.75e-42 149
MsG0880042588.01.T01 AT4G03610 38.492 252 117 12 56 280 9 249 9.44e-37 133

Find 84 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCGGTGGTTTCCCGAATT+TGG 0.079143 8:-11037960 MsG0880042588.01.T01:CDS
CGCTCTTCAGCTACACATTT+TGG 0.129908 8:-11035149 MsG0880042588.01.T01:CDS
TGACTACCTTACAAAATTAT+TGG 0.195753 8:-11034549 MsG0880042588.01.T01:CDS
CGGTCCCTTGGTTTCCGTTT+TGG 0.200037 8:-11035496 MsG0880042588.01.T01:CDS
TCACGCTTGGCTACATAAAT+TGG 0.214243 8:+11037159 None:intergenic
TGATACTATACATATGTTAT+AGG 0.281663 8:-11034264 MsG0880042588.01.T01:three_prime_UTR
TTGTATCAACTAAATAATAA+TGG 0.283710 8:+11035993 None:intergenic
AAGAATGGTGATAGGGAAAA+AGG 0.301564 8:+11034315 None:intergenic
TCCGGTGGTTTCCCGAATTT+GGG 0.301656 8:-11037959 MsG0880042588.01.T01:intron
ACTACAGTTTCACTCATAAA+AGG 0.301817 8:-11034465 MsG0880042588.01.T01:three_prime_UTR
AGAGGAAAAGAGATGGAAAA+AGG 0.316239 8:+11039977 None:intergenic
AGGACGCAAACGGCGTGAAT+AGG 0.338658 8:+11039997 None:intergenic
AAGAAATAAAGAATGGTGAT+AGG 0.348889 8:+11034307 None:intergenic
CAGGTAAACTAACCCAAATT+CGG 0.349548 8:+11037947 None:intergenic
CAATCACAAGTTATATTCAT+TGG 0.350082 8:-11039798 MsG0880042588.01.T01:CDS
TGTACCGGACATTTAGTAGA+AGG 0.364562 8:+11039729 None:intergenic
ATAACTTGTGATTGATCAAC+TGG 0.368109 8:+11039807 None:intergenic
TTGTACAAAAGCTGCTAAAC+CGG 0.368677 8:-11038920 MsG0880042588.01.T01:CDS
AGAGAGGTTACTGGAGTGGA+TGG 0.381727 8:+11039949 None:intergenic
CATTCTCATGCTGATGCAAT+TGG 0.382278 8:-11037365 MsG0880042588.01.T01:CDS
GGACGCAAACGGCGTGAATA+GGG 0.386217 8:+11039998 None:intergenic
AAAAGTGGATAAGTTTCTTC+AGG 0.386969 8:+11035337 None:intergenic
CAAGTTATATTCATTGGAAC+TGG 0.391006 8:-11039792 MsG0880042588.01.T01:CDS
TGTATCAACTAAATAATAAT+GGG 0.405339 8:+11035994 None:intergenic
TTGGTAATATATGTTACATA+AGG 0.409235 8:-11035477 MsG0880042588.01.T01:intron
CACAATATTCTTATAGATGC+TGG 0.417952 8:-11038835 MsG0880042588.01.T01:CDS
TGTAGCCAAGCGTGACTTTG+AGG 0.419835 8:-11037151 MsG0880042588.01.T01:intron
ACGAGAGAAGTGAGTGAAGA+AGG 0.420407 8:+11040034 None:intergenic
GGACTGTGAACTTCTAATAA+TGG 0.420963 8:-11035311 MsG0880042588.01.T01:intron
TGTGGCATGGTCAAGGTTAT+CGG 0.423742 8:-11035516 MsG0880042588.01.T01:CDS
GCAGTTTCTTCCAATGGAAT+TGG 0.430423 8:-11039843 MsG0880042588.01.T01:intron
CTAAACCGGGTGATAAGAAT+AGG 0.450434 8:-11038906 MsG0880042588.01.T01:CDS
GATGCGCAACTGAGCTATGA+TGG 0.461379 8:-11034512 MsG0880042588.01.T01:CDS
GGTCAAGGTTATCGGTCCCT+TGG 0.481205 8:-11035508 MsG0880042588.01.T01:CDS
CTGGAGTGGATGGGAGAGAG+AGG 0.482078 8:+11039959 None:intergenic
TTCAACATCACCAATTCCAT+TGG 0.484673 8:+11039833 None:intergenic
TTTGTTGCAGTTTCTTCCAA+TGG 0.485288 8:-11039849 MsG0880042588.01.T01:intron
AGAAATAAAGAATGGTGATA+GGG 0.486767 8:+11034308 None:intergenic
TACAAAATTATTGGAGTCTG+AGG 0.491029 8:-11034540 MsG0880042588.01.T01:CDS
CGAATAGAGTTAACCACCAT+TGG 0.493444 8:+11040067 None:intergenic
GGTAAAGAAGAAATAAAGAA+TGG 0.495634 8:+11034300 None:intergenic
AGTTCACAGTCCTTCAAAAG+TGG 0.504029 8:+11035322 None:intergenic
TGACCATGCCACACTGGTAG+TGG 0.508732 8:+11035526 None:intergenic
TAATCCTTCTACTAAATGTC+CGG 0.513244 8:-11039733 MsG0880042588.01.T01:intron
GGGAGAGAGAGGAAAAGAGA+TGG 0.515010 8:+11039970 None:intergenic
TGTAACATATATTACCAAAA+CGG 0.516666 8:+11035482 None:intergenic
AGGTAAACTAACCCAAATTC+GGG 0.517181 8:+11037948 None:intergenic
GAGAGGTTACTGGAGTGGAT+GGG 0.520388 8:+11039950 None:intergenic
AGAGAGAGAGGTTACTGGAG+TGG 0.522605 8:+11039945 None:intergenic
TCTCATGCTGATGCAATTGG+AGG 0.529678 8:-11037362 MsG0880042588.01.T01:intron
ATGTGTAGCTGAAGAGCGAT+CGG 0.537686 8:+11035154 None:intergenic
ACACAACACAATTGAACCAA+TGG 0.540102 8:-11040083 MsG0880042588.01.T01:exon
CATAGCTCAGTTGCGCATCA+AGG 0.543483 8:+11034516 None:intergenic
ATTCGCCACGCGAATGCCAC+AGG 0.550713 8:-11038862 MsG0880042588.01.T01:CDS
TTGAAATGAATGTCATTACC+AGG 0.551112 8:-11034382 MsG0880042588.01.T01:three_prime_UTR
GTCTTGATGATCTTAGAGAC+TGG 0.552009 8:-11037206 MsG0880042588.01.T01:CDS
GAGGACCTCAAAGTCACGCT+TGG 0.556366 8:+11037146 None:intergenic
CTTGGCTACATAAATTGGAA+TGG 0.558295 8:+11037164 None:intergenic
ATGAGAATGAGTAATAATAA+CGG 0.560983 8:+11037379 None:intergenic
AATGCTGAGACCGCAGCACC+AGG 0.563087 8:+11035959 None:intergenic
TTAGTCAAGCAGCTAACTCT+CGG 0.563225 8:+11039753 None:intergenic
ATTGGAACTGGAACTAGTGA+AGG 0.568637 8:-11039780 MsG0880042588.01.T01:CDS
TGTGTAGCTGAAGAGCGATC+GGG 0.569534 8:+11035155 None:intergenic
TGAAGGTATGATGCATCTGA+TGG 0.575148 8:-11034588 MsG0880042588.01.T01:intron
TGTACAAAAGCTGCTAAACC+GGG 0.576014 8:-11038919 MsG0880042588.01.T01:CDS
GCTACATAAATTGGAATGGA+GGG 0.577865 8:+11037168 None:intergenic
AGTCTCCTATTCTTATCACC+CGG 0.577902 8:+11038901 None:intergenic
ACCCAAATTCGGGAAACCAC+CGG 0.588739 8:+11037958 None:intergenic
CTACCAGTGTGGCATGGTCA+AGG 0.589078 8:-11035523 MsG0880042588.01.T01:CDS
ATGCGCAACTGAGCTATGAT+GGG 0.595409 8:-11034511 MsG0880042588.01.T01:CDS
TATTACCAAAACGGAAACCA+AGG 0.596749 8:+11035491 None:intergenic
TCTATCACAGTGCTCTCCGG+TGG 0.598907 8:-11037974 MsG0880042588.01.T01:CDS
GGCTACATAAATTGGAATGG+AGG 0.601861 8:+11037167 None:intergenic
CAACACAATTGAACCAATGG+TGG 0.605939 8:-11040080 MsG0880042588.01.T01:exon
ACAAAATTATTGGAGTCTGA+GGG 0.606652 8:-11034539 MsG0880042588.01.T01:CDS
TAGTATCATAGTGTTAAGAG+AGG 0.612714 8:+11034279 None:intergenic
AAGAATATTGTGTGTTCCTG+TGG 0.620931 8:+11038846 None:intergenic
TAACCTTGACCATGCCACAC+TGG 0.621640 8:+11035520 None:intergenic
TGTAATCATACCTGGTGCTG+CGG 0.622886 8:-11035969 MsG0880042588.01.T01:CDS
GATACAAGTGTAATCATACC+TGG 0.624797 8:-11035977 MsG0880042588.01.T01:CDS
ACTCCACTACCAGTGTGGCA+TGG 0.653555 8:-11035529 MsG0880042588.01.T01:CDS
ATTACCAAAACGGAAACCAA+GGG 0.656302 8:+11035492 None:intergenic
GTGTTCCTGTGGCATTCGCG+TGG 0.658076 8:+11038857 None:intergenic
AGTTTACTCCACTACCAGTG+TGG 0.676456 8:-11035534 MsG0880042588.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACCAAAATTTATTTATAATA+AGG + Chr8:11034498-11034517 None:intergenic 10.0%
!! TTATTTACTTTAGTTATTAT+CGG - Chr8:11034819-11034838 MsG0880042588.01.T01:intron 10.0%
!!! TCCTTATTATAAATAAATTT+TGG - Chr8:11034494-11034513 MsG0880042588.01.T01:CDS 10.0%
!! ACATTAAAAAATTAGAACTA+TGG - Chr8:11039149-11039168 MsG0880042588.01.T01:intron 15.0%
!! ATTGATGAAATATGTAATTA+TGG + Chr8:11039727-11039746 None:intergenic 15.0%
!! TCAGAAATTACAAATTTAAT+AGG + Chr8:11038769-11038788 None:intergenic 15.0%
!! TGTATCAACTAAATAATAAT+GGG + Chr8:11038391-11038410 None:intergenic 15.0%
!! TTCTCAAATATTATAACTTT+CGG - Chr8:11037922-11037941 MsG0880042588.01.T01:intron 15.0%
!! TTGTATCAACTAAATAATAA+TGG + Chr8:11038392-11038411 None:intergenic 15.0%
!!! AAATTACGAATTTTATGATA+TGG + Chr8:11034697-11034716 None:intergenic 15.0%
!!! AATTTTTTAATGTGAAAATG+AGG + Chr8:11039142-11039161 None:intergenic 15.0%
!!! AGCATTGATTTTTTTTAATA+CGG + Chr8:11037405-11037424 None:intergenic 15.0%
!!! ATACATTTAAGATAATTTTC+AGG - Chr8:11037848-11037867 MsG0880042588.01.T01:intron 15.0%
!!! ATTATTTTTGCCTTTTTTTA+TGG - Chr8:11035428-11035447 MsG0880042588.01.T01:intron 15.0%
!!! GTAATTATGGTTTTAAATAA+AGG + Chr8:11039714-11039733 None:intergenic 15.0%
!!! TAGATTTTCTTTTCTTTTTA+TGG - Chr8:11035701-11035720 MsG0880042588.01.T01:intron 15.0%
!! AAATTAATAGATAGCAATTG+TGG - Chr8:11035753-11035772 MsG0880042588.01.T01:intron 20.0%
!! AAATTATAATACAGAACCTT+TGG + Chr8:11037728-11037747 None:intergenic 20.0%
!! AACAGAAAAAATAATTGAAC+AGG + Chr8:11036457-11036476 None:intergenic 20.0%
!! AAGAAAAGAAAATCTAACTT+TGG + Chr8:11035697-11035716 None:intergenic 20.0%
!! AATTTAGTGAAGATATTGTA+TGG - Chr8:11035909-11035928 MsG0880042588.01.T01:intron 20.0%
!! AGAAAAGAAAATCTAACTTT+GGG + Chr8:11035696-11035715 None:intergenic 20.0%
!! AGATTAATGATAGAACTTTA+TGG - Chr8:11035267-11035286 MsG0880042588.01.T01:intron 20.0%
!! AGTTCATTGATCAAATATTT+AGG - Chr8:11039471-11039490 MsG0880042588.01.T01:intron 20.0%
!! ATAATATAATGAATGATCGA+GGG - Chr8:11038514-11038533 MsG0880042588.01.T01:intron 20.0%
!! ATGAGAATGAGTAATAATAA+CGG + Chr8:11037006-11037025 None:intergenic 20.0%
!! CAATCAATTGATGTATTTAA+AGG - Chr8:11038586-11038605 MsG0880042588.01.T01:intron 20.0%
!! GATTGATATTATTAATGTAC+CGG + Chr8:11034671-11034690 None:intergenic 20.0%
!! GTAGTAACTAAAAAAAATTG+TGG - Chr8:11039526-11039545 MsG0880042588.01.T01:intron 20.0%
!! TAAAAATCAACAAATGTGAA+AGG + Chr8:11039283-11039302 None:intergenic 20.0%
!! TAAACATCAAGAAATCTATT+AGG + Chr8:11038147-11038166 None:intergenic 20.0%
!! TATAATATAATGAATGATCG+AGG - Chr8:11038513-11038532 MsG0880042588.01.T01:intron 20.0%
!! TCTCAAATATTATAACTTTC+GGG - Chr8:11037923-11037942 MsG0880042588.01.T01:intron 20.0%
!! TGATACTATACATATGTTAT+AGG - Chr8:11040118-11040137 MsG0880042588.01.T01:five_prime_UTR 20.0%
!! TGTAACATATATTACCAAAA+CGG + Chr8:11038903-11038922 None:intergenic 20.0%
!! TTAAAATGCAGTTATAAAAG+TGG + Chr8:11038668-11038687 None:intergenic 20.0%
!! TTTATGTCAACATGTTTAAA+TGG - Chr8:11037466-11037485 MsG0880042588.01.T01:intron 20.0%
!! TTTGTAGTTAAAAATTGAGA+AGG - Chr8:11037627-11037646 MsG0880042588.01.T01:intron 20.0%
!! TTTGTGCAAGTATTATAATT+GGG - Chr8:11036729-11036748 MsG0880042588.01.T01:intron 20.0%
!!! ACATTTGTTGATTTTTATCT+TGG - Chr8:11039286-11039305 MsG0880042588.01.T01:intron 20.0%
!!! ATAATAAGCTTGATTTTGTT+AGG - Chr8:11037953-11037972 MsG0880042588.01.T01:intron 20.0%
!!! ATATGTATTGACAAAAAATC+TGG + Chr8:11038980-11038999 None:intergenic 20.0%
!!! GATATTGTTATTGTTATTTG+AGG - Chr8:11036480-11036499 MsG0880042588.01.T01:intron 20.0%
!!! TATACATCTTTTAAATGTTG+AGG + Chr8:11037601-11037620 None:intergenic 20.0%
!!! TATGGTTTTAAATAAAGGTT+CGG + Chr8:11039709-11039728 None:intergenic 20.0%
!!! TCTTTCTAAATAGTTTTTCT+AGG + Chr8:11035242-11035261 None:intergenic 20.0%
!!! TTGGTAATATATGTTACATA+AGG - Chr8:11038905-11038924 MsG0880042588.01.T01:CDS 20.0%
! AAACTGAGAAATTCAATTCA+AGG - Chr8:11036296-11036315 MsG0880042588.01.T01:intron 25.0%
! AAATAGACATGTATACAGTA+TGG - Chr8:11036256-11036275 MsG0880042588.01.T01:intron 25.0%
! AAGAAATAAAGAATGGTGAT+AGG + Chr8:11040078-11040097 None:intergenic 25.0%
! AAGATTAGATGAGATAAGAT+TGG - Chr8:11035064-11035083 MsG0880042588.01.T01:intron 25.0%
! AATTGGGATTATCAAATATC+TGG - Chr8:11036745-11036764 MsG0880042588.01.T01:intron 25.0%
! ACACTTTATCTACTCAATAA+GGG + Chr8:11037982-11038001 None:intergenic 25.0%
! AGAAATAAAGAATGGTGATA+GGG + Chr8:11040077-11040096 None:intergenic 25.0%
! AGTACTCTACAACTTTAATA+AGG - Chr8:11036538-11036557 MsG0880042588.01.T01:intron 25.0%
! AGTTTATGGAAAGATAGATA+AGG + Chr8:11039117-11039136 None:intergenic 25.0%
! ATATATATGTCTAAGAGACT+AGG - Chr8:11037323-11037342 MsG0880042588.01.T01:intron 25.0%
! ATATGTATTGCAATTATGCT+AGG - Chr8:11035597-11035616 MsG0880042588.01.T01:intron 25.0%
! CAATCACAAGTTATATTCAT+TGG - Chr8:11034584-11034603 MsG0880042588.01.T01:CDS 25.0%
! CCTACAATAACCATAAAAAA+AGG + Chr8:11035441-11035460 None:intergenic 25.0%
! CGATTAATATATAGTGTGTT+AGG - Chr8:11036233-11036252 MsG0880042588.01.T01:intron 25.0%
! CTTTGTGCAAGTATTATAAT+TGG - Chr8:11036728-11036747 MsG0880042588.01.T01:intron 25.0%
! GCTATTATTAAGATCAAATG+TGG - Chr8:11037353-11037372 MsG0880042588.01.T01:intron 25.0%
! GGTAAAGAAGAAATAAAGAA+TGG + Chr8:11040085-11040104 None:intergenic 25.0%
! GTACTCTACAACTTTAATAA+GGG - Chr8:11036539-11036558 MsG0880042588.01.T01:intron 25.0%
! TAATACTTTCTAATACTCTG+TGG - Chr8:11037053-11037072 MsG0880042588.01.T01:intron 25.0%
! TATGAATTATTCGTTACTCT+AGG + Chr8:11035993-11036012 None:intergenic 25.0%
! TGACTACCTTACAAAATTAT+TGG - Chr8:11039833-11039852 MsG0880042588.01.T01:CDS 25.0%
! TGCATTAGAAAAACTTTCAA+CGG - Chr8:11035883-11035902 MsG0880042588.01.T01:intron 25.0%
! TGGACTGAAATCAAAATAAA+AGG + Chr8:11035649-11035668 None:intergenic 25.0%
! TGTATAATATCTTGATCCAA+AGG - Chr8:11037709-11037728 MsG0880042588.01.T01:intron 25.0%
! TTATACAAGCAAAATATTCC+AGG + Chr8:11035783-11035802 None:intergenic 25.0%
! TTTGGATCAAGATATTATAC+AGG + Chr8:11037710-11037729 None:intergenic 25.0%
!! ATAATGTGTATACTTTTGAC+AGG - Chr8:11039193-11039212 MsG0880042588.01.T01:intron 25.0%
!! ATTAAGTATCACTTAAGTTG+AGG - Chr8:11034919-11034938 MsG0880042588.01.T01:intron 25.0%
!! CGTTGCAATATTTTATATTG+TGG - Chr8:11039589-11039608 MsG0880042588.01.T01:intron 25.0%
!! CTGTATTATAATTTGTGTGA+TGG - Chr8:11037734-11037753 MsG0880042588.01.T01:intron 25.0%
!! TAAGTTGAGGAAAATTTCTA+GGG - Chr8:11034932-11034951 MsG0880042588.01.T01:intron 25.0%
!! TACGAATTTTATGATATGGT+AGG + Chr8:11034693-11034712 None:intergenic 25.0%
!! TTGAAAGCTTTAATTTCAGA+AGG + Chr8:11037275-11037294 None:intergenic 25.0%
!! TTTTTAATACGGTGATATGT+GGG + Chr8:11037394-11037413 None:intergenic 25.0%
!!! AGAAAAATGAAGTGTTTTCA+GGG - Chr8:11037888-11037907 MsG0880042588.01.T01:intron 25.0%
!!! ATGATAGCTTTTGAAATTCA+GGG - Chr8:11037772-11037791 MsG0880042588.01.T01:intron 25.0%
!!! CAGTGTAAATTAGTTTTACA+CGG + Chr8:11038736-11038755 None:intergenic 25.0%
!!! CCTTTTTTTATGGTTATTGT+AGG - Chr8:11035438-11035457 MsG0880042588.01.T01:intron 25.0%
!!! CTATTTTCCATATTGCTTTT+CGG - Chr8:11036512-11036531 MsG0880042588.01.T01:intron 25.0%
!!! TAGAAAAATGAAGTGTTTTC+AGG - Chr8:11037887-11037906 MsG0880042588.01.T01:intron 25.0%
!!! TATGATAGCTTTTGAAATTC+AGG - Chr8:11037771-11037790 MsG0880042588.01.T01:intron 25.0%
!!! TTAAGTTGAGGAAAATTTCT+AGG - Chr8:11034931-11034950 MsG0880042588.01.T01:intron 25.0%
!!! TTTTTGTCTCTTAAGTTGAT+AGG + Chr8:11036785-11036804 None:intergenic 25.0%
!!! TTTTTTAATACGGTGATATG+TGG + Chr8:11037395-11037414 None:intergenic 25.0%
AAAAAATGAAACACTCCCAT+TGG - Chr8:11038706-11038725 MsG0880042588.01.T01:intron 30.0%
AAAAGTGGATAAGTTTCTTC+AGG + Chr8:11039048-11039067 None:intergenic 30.0%
AAGAGACAAATCCAAAAGAT+TGG + Chr8:11038039-11038058 None:intergenic 30.0%
AAGTGTGATATTAAGCAATG+AGG - Chr8:11037996-11038015 MsG0880042588.01.T01:intron 30.0%
AATCGAGTTATAGTCAAGAT+AGG + Chr8:11036218-11036237 None:intergenic 30.0%
ACAAAATTATTGGAGTCTGA+GGG - Chr8:11039843-11039862 MsG0880042588.01.T01:intron 30.0%
ACATCAAGAAATCACAAACT+TGG + Chr8:11035669-11035688 None:intergenic 30.0%
ACATCAAGAAATCTATTAGG+CGG + Chr8:11038144-11038163 None:intergenic 30.0%
ACTACAGTTTCACTCATAAA+AGG - Chr8:11039917-11039936 MsG0880042588.01.T01:intron 30.0%
AGTCAGGATATGATATATCA+GGG - Chr8:11035955-11035974 MsG0880042588.01.T01:CDS 30.0%
AGTTACTACCTATGAACTTT+AGG + Chr8:11039515-11039534 None:intergenic 30.0%
ATCAAATGTGGAAACTGTAA+GGG - Chr8:11037365-11037384 MsG0880042588.01.T01:CDS 30.0%
ATTATGCTAGGTTACGAATT+AGG - Chr8:11035609-11035628 MsG0880042588.01.T01:intron 30.0%
ATTTCCTGAAATACAAGAAC+AGG + Chr8:11036053-11036072 None:intergenic 30.0%
CAAGTTATATTCATTGGAAC+TGG - Chr8:11034590-11034609 MsG0880042588.01.T01:intron 30.0%
CACAATATTCTTATAGATGC+TGG - Chr8:11035547-11035566 MsG0880042588.01.T01:intron 30.0%
CACACTTTATCTACTCAATA+AGG + Chr8:11037983-11038002 None:intergenic 30.0%
CGAAAAGCAATATGGAAAAT+AGG + Chr8:11036514-11036533 None:intergenic 30.0%
CTACAACTTTAATAAGGGTT+AGG - Chr8:11036544-11036563 MsG0880042588.01.T01:intron 30.0%
GAATATCTCCTAAAGTTCAT+AGG - Chr8:11039504-11039523 MsG0880042588.01.T01:intron 30.0%
GGTTCTTATAAAGTTGTAGT+GGG - Chr8:11036666-11036685 MsG0880042588.01.T01:intron 30.0%
GTATGGATGAGTATAAGAAT+AGG - Chr8:11035926-11035945 MsG0880042588.01.T01:CDS 30.0%
TAACAAATGATTCATGAGTC+CGG + Chr8:11038286-11038305 None:intergenic 30.0%
TAATAGCGGTAATGTTCTAT+GGG - Chr8:11034961-11034980 MsG0880042588.01.T01:intron 30.0%
TAATCCTTCTACTAAATGTC+CGG - Chr8:11034649-11034668 MsG0880042588.01.T01:intron 30.0%
TACAAAATTATTGGAGTCTG+AGG - Chr8:11039842-11039861 MsG0880042588.01.T01:CDS 30.0%
TAGTATCATAGTGTTAAGAG+AGG + Chr8:11040106-11040125 None:intergenic 30.0%
TAGTCAGGATATGATATATC+AGG - Chr8:11035954-11035973 MsG0880042588.01.T01:CDS 30.0%
TATATATAGACAACAAGCAG+AGG + Chr8:11037310-11037329 None:intergenic 30.0%
TATGGAAAGATAGATAAGGT+AGG + Chr8:11039113-11039132 None:intergenic 30.0%
TATGGCATAGTATTTCTCTT+TGG - Chr8:11039167-11039186 MsG0880042588.01.T01:intron 30.0%
TGAGAAAAATTCAACCCAAA+AGG - Chr8:11039353-11039372 MsG0880042588.01.T01:intron 30.0%
TGATATATCATATCCTGACT+AGG + Chr8:11035955-11035974 None:intergenic 30.0%
TGTACATACCATAAAAAACC+TGG + Chr8:11040021-11040040 None:intergenic 30.0%
TTCAATCCGTGTACAAAAAA+AGG + Chr8:11038474-11038493 None:intergenic 30.0%
TTGAAATGAATGTCATTACC+AGG - Chr8:11040000-11040019 MsG0880042588.01.T01:CDS 30.0%
TTTCCTGAAATACAAGAACA+GGG + Chr8:11036052-11036071 None:intergenic 30.0%
! AATTTTTCTCACTTCCTCTA+AGG + Chr8:11039344-11039363 None:intergenic 30.0%
! AATTTTTGATGTCTCGTTGT+TGG - Chr8:11039766-11039785 MsG0880042588.01.T01:CDS 30.0%
! ATAACTTGTGATTGATCAAC+TGG + Chr8:11034578-11034597 None:intergenic 30.0%
! CAGACTCCAATAATTTTGTA+AGG + Chr8:11039842-11039861 None:intergenic 30.0%
! GTTGATTCATTTACAAGTGA+AGG - Chr8:11035831-11035850 MsG0880042588.01.T01:intron 30.0%
! TACTTTTCCGAAAAGCAATA+TGG + Chr8:11036522-11036541 None:intergenic 30.0%
! TTATGGTATGTACATTTTGC+AGG - Chr8:11040027-11040046 MsG0880042588.01.T01:CDS 30.0%
! TTATTCTGATCTTCCTTTTC+AGG - Chr8:11039318-11039337 MsG0880042588.01.T01:intron 30.0%
! TTGGTTTAGGATTTCTATTG+AGG - Chr8:11035389-11035408 MsG0880042588.01.T01:intron 30.0%
!! AGAAACTTATCCACTTTTGA+AGG - Chr8:11039050-11039069 MsG0880042588.01.T01:intron 30.0%
!!! AAGCGAGCTTTATTTTGTAA+CGG + Chr8:11036193-11036212 None:intergenic 30.0%
!!! ATTTTTGTTTTCCTCGAAAC+TGG + Chr8:11036322-11036341 None:intergenic 30.0%
!!! GAAGAACCTTTTTTTGTACA+CGG - Chr8:11038465-11038484 MsG0880042588.01.T01:intron 30.0%
!!! TGTCATTACCAGGTTTTTTA+TGG - Chr8:11040010-11040029 MsG0880042588.01.T01:CDS 30.0%
!!! TTTTTTTGTACACGGATTGA+AGG - Chr8:11038473-11038492 MsG0880042588.01.T01:intron 30.0%
AAAGATAGATAAGGTAGGAG+GGG + Chr8:11039108-11039127 None:intergenic 35.0%
AACAGGAAATCCAAATCCAT+GGG + Chr8:11038205-11038224 None:intergenic 35.0%
AAGAATATTGTGTGTTCCTG+TGG + Chr8:11035539-11035558 None:intergenic 35.0%
AAGAATGGTGATAGGGAAAA+AGG + Chr8:11040070-11040089 None:intergenic 35.0%
ACACAACACAATTGAACCAA+TGG - Chr8:11034299-11034318 MsG0880042588.01.T01:three_prime_UTR 35.0%
AGAGGAAAAGAGATGGAAAA+AGG + Chr8:11034408-11034427 None:intergenic 35.0%
AGCATAACTGTAATGCAAGA+TGG + Chr8:11037809-11037828 None:intergenic 35.0%
AGGTAAACTAACCCAAATTC+GGG + Chr8:11036437-11036456 None:intergenic 35.0%
ATTACCAAAACGGAAACCAA+GGG + Chr8:11038893-11038912 None:intergenic 35.0%
ATTAGAGATTGAGAGAGTTG+GGG - Chr8:11035097-11035116 MsG0880042588.01.T01:intron 35.0%
CAAGCTTAACTCATACACTA+TGG + Chr8:11036705-11036724 None:intergenic 35.0%
CAGAAAAAGAGAGAAAACCA+GGG - Chr8:11036014-11036033 MsG0880042588.01.T01:intron 35.0%
CAGGTAAACTAACCCAAATT+CGG + Chr8:11036438-11036457 None:intergenic 35.0%
CATCAAGAAATCTATTAGGC+GGG + Chr8:11038143-11038162 None:intergenic 35.0%
CATTAGAGATTGAGAGAGTT+GGG - Chr8:11035096-11035115 MsG0880042588.01.T01:intron 35.0%
CGCTTACTTTACTTTCATGT+TGG + Chr8:11035010-11035029 None:intergenic 35.0%
CGGTTCTTATAAAGTTGTAG+TGG - Chr8:11036665-11036684 MsG0880042588.01.T01:intron 35.0%
CTCACGTGTTTGCTTAATTT+GGG - Chr8:11036352-11036371 MsG0880042588.01.T01:intron 35.0%
CTGTTGCACAAAGAAAATCA+AGG + Chr8:11039443-11039462 None:intergenic 35.0%
CTTGGCTACATAAATTGGAA+TGG + Chr8:11037221-11037240 None:intergenic 35.0%
CTTTATAAGAACCGCTCTAA+TGG + Chr8:11036659-11036678 None:intergenic 35.0%
GAAAGATAGATAAGGTAGGA+GGG + Chr8:11039109-11039128 None:intergenic 35.0%
GATACAAGTGTAATCATACC+TGG - Chr8:11038405-11038424 MsG0880042588.01.T01:intron 35.0%
GATCAAATGTGGAAACTGTA+AGG - Chr8:11037364-11037383 MsG0880042588.01.T01:CDS 35.0%
GCTACATAAATTGGAATGGA+GGG + Chr8:11037217-11037236 None:intergenic 35.0%
GGACTGTGAACTTCTAATAA+TGG - Chr8:11039071-11039090 MsG0880042588.01.T01:intron 35.0%
GTAATAGCGGTAATGTTCTA+TGG - Chr8:11034960-11034979 MsG0880042588.01.T01:intron 35.0%
GTAGAATGGAATATTTGAGC+AGG - Chr8:11036575-11036594 MsG0880042588.01.T01:intron 35.0%
TAACAGGAAATCCAAATCCA+TGG + Chr8:11038206-11038225 None:intergenic 35.0%
TAGTGTATGAGTTAAGCTTG+TGG - Chr8:11036705-11036724 MsG0880042588.01.T01:intron 35.0%
TATTACCAAAACGGAAACCA+AGG + Chr8:11038894-11038913 None:intergenic 35.0%
TGACTGAAATTGTTGTGCAT+GGG - Chr8:11038786-11038805 MsG0880042588.01.T01:intron 35.0%
TGGACTCATGAAAACTCTAA+TGG - Chr8:11035721-11035740 MsG0880042588.01.T01:intron 35.0%
TGTTCATTACTGAAATGTGC+AGG - Chr8:11038353-11038372 MsG0880042588.01.T01:intron 35.0%
TTAAAGCTTGTGAAGATCAC+CGG - Chr8:11038264-11038283 MsG0880042588.01.T01:intron 35.0%
TTCAACATCACCAATTCCAT+TGG + Chr8:11034552-11034571 None:intergenic 35.0%
TTGTACAAAAGCTGCTAAAC+CGG - Chr8:11035462-11035481 MsG0880042588.01.T01:intron 35.0%
TTTCATGTAAGTGAACCACA+AGG + Chr8:11039659-11039678 None:intergenic 35.0%
TTTGTTGCAGTTTCTTCCAA+TGG - Chr8:11034533-11034552 MsG0880042588.01.T01:CDS 35.0%
! AGTTTTACACGGATTTCCAA+TGG + Chr8:11038725-11038744 None:intergenic 35.0%
! ATCCAAAAGATTGGTCCATT+AGG + Chr8:11038030-11038049 None:intergenic 35.0%
! ATTGGTGTTTATGCAAAGAG+TGG - Chr8:11036099-11036118 MsG0880042588.01.T01:intron 35.0%
! GATACACATTGCATTGACAT+TGG - Chr8:11036081-11036100 MsG0880042588.01.T01:intron 35.0%
! GCAGGTTATCTATTCTGTTT+TGG + Chr8:11036606-11036625 None:intergenic 35.0%
! GTTTTACACGGATTTCCAAT+GGG + Chr8:11038724-11038743 None:intergenic 35.0%
! TACACATTTTGGACTTCCAA+GGG - Chr8:11039244-11039263 MsG0880042588.01.T01:intron 35.0%
! TGACTAGTTGTATTTCTGTC+AGG - Chr8:11036964-11036983 MsG0880042588.01.T01:intron 35.0%
! TTTGTGTCAGTGTTTGGTTT+AGG - Chr8:11035376-11035395 MsG0880042588.01.T01:intron 35.0%
!! GTGAAAATGAGGCTAGTTTA+TGG + Chr8:11039131-11039150 None:intergenic 35.0%
!! GTTGTTGTTGTTTATGTGTC+TGG - Chr8:11035340-11035359 MsG0880042588.01.T01:CDS 35.0%
!!! ACCAGTAAAAAGTGTCCTTT+TGG + Chr8:11039371-11039390 None:intergenic 35.0%
!!! AGCTTTATTTTGTAACGGAC+TGG + Chr8:11036188-11036207 None:intergenic 35.0%
!!! ATAGCTTTTGAAATTCAGGG+AGG - Chr8:11037775-11037794 MsG0880042588.01.T01:intron 35.0%
!!! CCAGTAAAAAGTGTCCTTTT+GGG + Chr8:11039370-11039389 None:intergenic 35.0%
!!! TAGCTTTTGAAATTCAGGGA+GGG - Chr8:11037776-11037795 MsG0880042588.01.T01:intron 35.0%
!!! TGGGAGTGTTTCATTTTTTC+AGG + Chr8:11038705-11038724 None:intergenic 35.0%
AAATCCAAATCCATGGGACA+AGG + Chr8:11038199-11038218 None:intergenic 40.0%
AAATGGTACAAACTAGCCCT+AGG - Chr8:11035135-11035154 MsG0880042588.01.T01:intron 40.0%
AAGATAGATAAGGTAGGAGG+GGG + Chr8:11039107-11039126 None:intergenic 40.0%
AATCCAAATCCATGGGACAA+GGG + Chr8:11038198-11038217 None:intergenic 40.0%
AATGGTGTTTATGCCTTCAC+TGG - Chr8:11037484-11037503 MsG0880042588.01.T01:intron 40.0%
AGAAAATCAAGGCATGAAGC+TGG + Chr8:11039432-11039451 None:intergenic 40.0%
AGATGGAAAAAGGACGCAAA+CGG + Chr8:11034398-11034417 None:intergenic 40.0%
AGGAAGATCAGAATTACCCT+TGG + Chr8:11039263-11039282 None:intergenic 40.0%
AGGCAGATGCAGATATTAAC+TGG + Chr8:11037581-11037600 None:intergenic 40.0%
AGGTGATGTTTCTCACTAAG+TGG - Chr8:11038925-11038944 MsG0880042588.01.T01:CDS 40.0%
AGTCAAATCACTGAAGACAG+AGG - Chr8:11035212-11035231 MsG0880042588.01.T01:intron 40.0%
AGTCTCCTATTCTTATCACC+CGG + Chr8:11035484-11035503 None:intergenic 40.0%
AGTTCACAGTCCTTCAAAAG+TGG + Chr8:11039063-11039082 None:intergenic 40.0%
ATGCTCAAACAAACCACCTA+GGG + Chr8:11035154-11035173 None:intergenic 40.0%
ATGGTGTTTATGCCTTCACT+GGG - Chr8:11037485-11037504 MsG0880042588.01.T01:intron 40.0%
ATTGGAACTGGAACTAGTGA+AGG - Chr8:11034602-11034621 MsG0880042588.01.T01:intron 40.0%
ATTTACTTTCCCTTGTCCCA+TGG - Chr8:11038186-11038205 MsG0880042588.01.T01:intron 40.0%
ATTTCAGAAGGAAAGAGCAG+CGG + Chr8:11037263-11037282 None:intergenic 40.0%
CAACACAATTGAACCAATGG+TGG - Chr8:11034302-11034321 MsG0880042588.01.T01:three_prime_UTR 40.0%
CATTCTCATGCTGATGCAAT+TGG - Chr8:11037017-11037036 MsG0880042588.01.T01:intron 40.0%
CCAAATTAAGCAAACACGTG+AGG + Chr8:11036354-11036373 None:intergenic 40.0%
CCTCACGTGTTTGCTTAATT+TGG - Chr8:11036351-11036370 MsG0880042588.01.T01:intron 40.0%
CGAATAGAGTTAACCACCAT+TGG + Chr8:11034318-11034337 None:intergenic 40.0%
CGATCTACATCATAAGCTCT+AGG + Chr8:11036882-11036901 None:intergenic 40.0%
CTAAACCGGGTGATAAGAAT+AGG - Chr8:11035476-11035495 MsG0880042588.01.T01:intron 40.0%
CTCCTTACTGCAAAATCTAC+AGG + Chr8:11035189-11035208 None:intergenic 40.0%
CTGACTGAAATTGTTGTGCA+TGG - Chr8:11038785-11038804 MsG0880042588.01.T01:intron 40.0%
GCAGAAAAAGAGAGAAAACC+AGG - Chr8:11036013-11036032 MsG0880042588.01.T01:intron 40.0%
GCAGTTTCTTCCAATGGAAT+TGG - Chr8:11034539-11034558 MsG0880042588.01.T01:CDS 40.0%
GCATTAGAGATTGAGAGAGT+TGG - Chr8:11035095-11035114 MsG0880042588.01.T01:intron 40.0%
GGAAAGATAGATAAGGTAGG+AGG + Chr8:11039110-11039129 None:intergenic 40.0%
GGCTACATAAATTGGAATGG+AGG + Chr8:11037218-11037237 None:intergenic 40.0%
GGTAGCAAGTGTAGTTGAAA+TGG - Chr8:11035118-11035137 MsG0880042588.01.T01:intron 40.0%
GTCACTATTACATACACACC+TGG - Chr8:11039551-11039570 MsG0880042588.01.T01:intron 40.0%
GTTAGGAACTGCATGTAGAA+TGG - Chr8:11036561-11036580 MsG0880042588.01.T01:intron 40.0%
TAAGAATAGGTTGCCTAGTC+AGG - Chr8:11035939-11035958 MsG0880042588.01.T01:CDS 40.0%
TACATCAGTGGCATTTCTTG+TGG - Chr8:11036819-11036838 MsG0880042588.01.T01:intron 40.0%
TACTTTCAGGATAAAGCAGC+AGG + Chr8:11038235-11038254 None:intergenic 40.0%
TATGCTCAAACAAACCACCT+AGG + Chr8:11035155-11035174 None:intergenic 40.0%
TCACAAGAGTTGTACATCAG+TGG - Chr8:11036807-11036826 MsG0880042588.01.T01:intron 40.0%
TCACGCTTGGCTACATAAAT+TGG + Chr8:11037226-11037245 None:intergenic 40.0%
TCAGATGCATCATACCTTCA+AGG + Chr8:11039794-11039813 None:intergenic 40.0%
TCATACATGCACCATTAGAG+CGG - Chr8:11036645-11036664 MsG0880042588.01.T01:intron 40.0%
TCTCCCTGTTCTTGTATTTC+AGG - Chr8:11036046-11036065 MsG0880042588.01.T01:intron 40.0%
TGTACAAAAGCTGCTAAACC+GGG - Chr8:11035463-11035482 MsG0880042588.01.T01:intron 40.0%
TGTACCGGACATTTAGTAGA+AGG + Chr8:11034656-11034675 None:intergenic 40.0%
TGTTCTATGGGACAAAGTGT+TGG - Chr8:11034973-11034992 MsG0880042588.01.T01:intron 40.0%
TTAGTCAAGCAGCTAACTCT+CGG + Chr8:11034632-11034651 None:intergenic 40.0%
TTATGTGTCTGGATCGTGTT+TGG - Chr8:11035351-11035370 MsG0880042588.01.T01:CDS 40.0%
TTGGATTTGTCTCTTCTCGT+GGG - Chr8:11038044-11038063 MsG0880042588.01.T01:intron 40.0%
TTTGGATTTGTCTCTTCTCG+TGG - Chr8:11038043-11038062 MsG0880042588.01.T01:intron 40.0%
! AAGTAAGCGTTGTAGAGATG+AGG - Chr8:11035021-11035040 MsG0880042588.01.T01:CDS 40.0%
! AATGAGGCTTTTCCACCTAA+TGG - Chr8:11038012-11038031 MsG0880042588.01.T01:intron 40.0%
! ACTTTTGACAGGATGCTTTG+AGG - Chr8:11039204-11039223 MsG0880042588.01.T01:intron 40.0%
! ATAAAGTTGTAGTGGGACCA+GGG - Chr8:11036673-11036692 MsG0880042588.01.T01:intron 40.0%
! CAAAAGATTGGTCCATTAGG+TGG + Chr8:11038027-11038046 None:intergenic 40.0%
! CTACACATTTTGGACTTCCA+AGG - Chr8:11039243-11039262 MsG0880042588.01.T01:intron 40.0%
! GACCTGTAGATTTTGCAGTA+AGG - Chr8:11035184-11035203 MsG0880042588.01.T01:intron 40.0%
! GTCTTGATGATCTTAGAGAC+TGG - Chr8:11037176-11037195 MsG0880042588.01.T01:CDS 40.0%
! GTTCTATGGGACAAAGTGTT+GGG - Chr8:11034974-11034993 MsG0880042588.01.T01:intron 40.0%
! TATAAAGTTGTAGTGGGACC+AGG - Chr8:11036672-11036691 MsG0880042588.01.T01:intron 40.0%
! TCTAAGATCATCAAGACCTG+GGG + Chr8:11037173-11037192 None:intergenic 40.0%
! TGAAGGTATGATGCATCTGA+TGG - Chr8:11039794-11039813 MsG0880042588.01.T01:CDS 40.0%
! TTGGTGTTTGTGTCAGTGTT+TGG - Chr8:11035370-11035389 MsG0880042588.01.T01:intron 40.0%
! TTTGTACACGGATTGAAGGT+CGG - Chr8:11038477-11038496 MsG0880042588.01.T01:intron 40.0%
! TTTTCTATCACAGTGCTCTC+CGG - Chr8:11036405-11036424 MsG0880042588.01.T01:intron 40.0%
!! CACCTAATGGACCAATCTTT+TGG - Chr8:11038025-11038044 MsG0880042588.01.T01:intron 40.0%
!! CCCAAAAGGACACTTTTTAC+TGG - Chr8:11039367-11039386 MsG0880042588.01.T01:intron 40.0%
!! CTCTAAGATCATCAAGACCT+GGG + Chr8:11037174-11037193 None:intergenic 40.0%
!! TCTCTAAGATCATCAAGACC+TGG + Chr8:11037175-11037194 None:intergenic 40.0%
!! TTCTAGGGTAGCTGTAATAG+CGG - Chr8:11034947-11034966 MsG0880042588.01.T01:intron 40.0%
AAATCAAGGCATGAAGCTGG+AGG + Chr8:11039429-11039448 None:intergenic 45.0%
ACGAGAGAAGTGAGTGAAGA+AGG + Chr8:11034351-11034370 None:intergenic 45.0%
ACGCTTACAACCCTTTCAGT+AGG - Chr8:11038106-11038125 MsG0880042588.01.T01:intron 45.0%
AGTTTACTCCACTACCAGTG+TGG - Chr8:11038848-11038867 MsG0880042588.01.T01:CDS 45.0%
AGTTTACTGCGCAGTTGGTT+AGG - Chr8:11036136-11036155 MsG0880042588.01.T01:intron 45.0%
ATACACTATGGACAACACCC+TGG + Chr8:11036693-11036712 None:intergenic 45.0%
ATGCGCAACTGAGCTATGAT+GGG - Chr8:11039871-11039890 MsG0880042588.01.T01:intron 45.0%
ATGTGTAGCTGAAGAGCGAT+CGG + Chr8:11039231-11039250 None:intergenic 45.0%
CGCTTACAACCCTTTCAGTA+GGG - Chr8:11038107-11038126 MsG0880042588.01.T01:intron 45.0%
GAAAAAGGCAGAATAGCTGC+AGG + Chr8:11040055-11040074 None:intergenic 45.0%
GAAATTGTTGTGCATGGGCT+TGG - Chr8:11038791-11038810 MsG0880042588.01.T01:intron 45.0%
GAAGAAGTTCACCAGTCGTT+AGG + Chr8:11038077-11038096 None:intergenic 45.0%
GATAGCAATTGTGGTCTTCC+TGG - Chr8:11035762-11035781 MsG0880042588.01.T01:intron 45.0%
GATGTAGATCGCATTCTTGC+TGG - Chr8:11036891-11036910 MsG0880042588.01.T01:intron 45.0%
GCTTACAACCCTTTCAGTAG+GGG - Chr8:11038108-11038127 MsG0880042588.01.T01:intron 45.0%
GGAGGAAGATTATGCTGACA+TGG + Chr8:11039411-11039430 None:intergenic 45.0%
GGGTTGTAAGCGTCTACTAT+AGG + Chr8:11038099-11038118 None:intergenic 45.0%
TAAAGGTTCGGAACTGCAAC+TGG + Chr8:11039697-11039716 None:intergenic 45.0%
TACACACCTGGTATCGTTTG+CGG - Chr8:11039563-11039582 MsG0880042588.01.T01:intron 45.0%
TAGAGATGAGGATGTTGCGT+TGG - Chr8:11035033-11035052 MsG0880042588.01.T01:CDS 45.0%
TATCAGCTCTGTACCTTCCT+CGG + Chr8:11037516-11037535 None:intergenic 45.0%
TCAATTCAAGGCCAGTTTCG+AGG - Chr8:11036308-11036327 MsG0880042588.01.T01:intron 45.0%
TCTCATGCTGATGCAATTGG+AGG - Chr8:11037020-11037039 MsG0880042588.01.T01:intron 45.0%
TGCAACTGGCTGCAGTATAA+AGG + Chr8:11039683-11039702 None:intergenic 45.0%
TGGGCTTAAATCCTAACGAC+TGG - Chr8:11038063-11038082 MsG0880042588.01.T01:intron 45.0%
TGTGGCATGGTCAAGGTTAT+CGG - Chr8:11038866-11038885 MsG0880042588.01.T01:CDS 45.0%
TTTCCCTTGTCCCATGGATT+TGG - Chr8:11038192-11038211 MsG0880042588.01.T01:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr8:11035316-11035335 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr8:11035317-11035336 None:intergenic 45.0%
! CAGTTAGTTTACTGCGCAGT+TGG - Chr8:11036131-11036150 MsG0880042588.01.T01:intron 45.0%
! CGCTCTTCAGCTACACATTT+TGG - Chr8:11039233-11039252 MsG0880042588.01.T01:intron 45.0%
! TGTAATCATACCTGGTGCTG+CGG - Chr8:11038413-11038432 MsG0880042588.01.T01:intron 45.0%
!! AAGCAGCAGGTGCTATTAAC+AGG + Chr8:11038222-11038241 None:intergenic 45.0%
!! ACTTCCTCTAAGGCCTGAAA+AGG + Chr8:11039334-11039353 None:intergenic 45.0%
!! TCTTCCTTTTCAGGCCTTAG+AGG - Chr8:11039327-11039346 MsG0880042588.01.T01:intron 45.0%
ACCCAAATTCGGGAAACCAC+CGG + Chr8:11036427-11036446 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + Chr8:11034450-11034469 None:intergenic 50.0%
AGAGAGAGAGGTTACTGGAG+TGG + Chr8:11034440-11034459 None:intergenic 50.0%
AGAGAGGTTACTGGAGTGGA+TGG + Chr8:11034436-11034455 None:intergenic 50.0%
ATATCTCGCGTCGTTTGTGC+AGG + Chr8:11036624-11036643 None:intergenic 50.0%
ATCAGCTCTGTACCTTCCTC+GGG + Chr8:11037515-11037534 None:intergenic 50.0%
ATGTCACCACCCCTACTGAA+AGG + Chr8:11038120-11038139 None:intergenic 50.0%
CATAGCTCAGTTGCGCATCA+AGG + Chr8:11039869-11039888 None:intergenic 50.0%
CATCAATCGCAGTCACCTTG+TGG - Chr8:11039641-11039660 MsG0880042588.01.T01:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr8:11035315-11035334 MsG0880042588.01.T01:CDS 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr8:11035312-11035331 None:intergenic 50.0%
GACTGCGATTGATGCAGCAT+CGG + Chr8:11039635-11039654 None:intergenic 50.0%
GAGAGAGAGAGAGAGGTTAC+TGG + Chr8:11034445-11034464 None:intergenic 50.0%
GAGAGGTTACTGGAGTGGAT+GGG + Chr8:11034435-11034454 None:intergenic 50.0%
GATGCGCAACTGAGCTATGA+TGG - Chr8:11039870-11039889 MsG0880042588.01.T01:intron 50.0%
GGGAGAGAGAGGAAAAGAGA+TGG + Chr8:11034415-11034434 None:intergenic 50.0%
TAACCTTGACCATGCCACAC+TGG + Chr8:11038865-11038884 None:intergenic 50.0%
TACAACCCTTTCAGTAGGGG+TGG - Chr8:11038111-11038130 MsG0880042588.01.T01:intron 50.0%
TCCGGTGGTTTCCCGAATTT+GGG - Chr8:11036423-11036442 MsG0880042588.01.T01:intron 50.0%
TCTCGTTGTTGGCACCTTGA+AGG - Chr8:11039777-11039796 MsG0880042588.01.T01:CDS 50.0%
TGCGCAGTTGGTTAGGAGTT+AGG - Chr8:11036143-11036162 MsG0880042588.01.T01:intron 50.0%
TGGTACAAACTAGCCCTAGG+TGG - Chr8:11035138-11035157 MsG0880042588.01.T01:intron 50.0%
TGTAGCCAAGCGTGACTTTG+AGG - Chr8:11037231-11037250 MsG0880042588.01.T01:intron 50.0%
TGTCACCACCCCTACTGAAA+GGG + Chr8:11038119-11038138 None:intergenic 50.0%
TGTGTAGCTGAAGAGCGATC+GGG + Chr8:11039230-11039249 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr8:11035318-11035337 None:intergenic 50.0%
ACTAAGTGGGGTCGGCTACA+CGG + Chr8:11035304-11035323 None:intergenic 55.0%
ACTCCACTACCAGTGTGGCA+TGG - Chr8:11038853-11038872 MsG0880042588.01.T01:CDS 55.0%
AGAAGGAAAGAGCAGCGGAG+AGG + Chr8:11037258-11037277 None:intergenic 55.0%
AGATAAGGTAGGAGGGGGAG+CGG + Chr8:11039102-11039121 None:intergenic 55.0%
AGGACGCAAACGGCGTGAAT+AGG + Chr8:11034388-11034407 None:intergenic 55.0%
CAGGGAGAACTCACTTTCCC+TGG + Chr8:11036034-11036053 None:intergenic 55.0%
CATGCTTCTCTCTTCTCCCC+AGG - Chr8:11037154-11037173 MsG0880042588.01.T01:CDS 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr8:11035310-11035329 MsG0880042588.01.T01:intron 55.0%
CTACCAGTGTGGCATGGTCA+AGG - Chr8:11038859-11038878 MsG0880042588.01.T01:CDS 55.0%
CTCCGGTGGTTTCCCGAATT+TGG - Chr8:11036422-11036441 MsG0880042588.01.T01:intron 55.0%
GAGGACCTCAAAGTCACGCT+TGG + Chr8:11037239-11037258 None:intergenic 55.0%
GGACGCAAACGGCGTGAATA+GGG + Chr8:11034387-11034406 None:intergenic 55.0%
GGTCAAGGTTATCGGTCCCT+TGG - Chr8:11038874-11038893 MsG0880042588.01.T01:CDS 55.0%
TCACTGGGATTACCCGAGGA+AGG - Chr8:11037500-11037519 MsG0880042588.01.T01:intron 55.0%
TCCTCGGGTAATCCCAGTGA+AGG + Chr8:11037500-11037519 None:intergenic 55.0%
TCTATCACAGTGCTCTCCGG+TGG - Chr8:11036408-11036427 MsG0880042588.01.T01:intron 55.0%
TGACCATGCCACACTGGTAG+TGG + Chr8:11038859-11038878 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - Chr8:11035304-11035323 MsG0880042588.01.T01:intron 55.0%
! CGGTCCCTTGGTTTCCGTTT+TGG - Chr8:11038886-11038905 MsG0880042588.01.T01:CDS 55.0%
AATGCTGAGACCGCAGCACC+AGG + Chr8:11038426-11038445 None:intergenic 60.0%
ACGCGACCGCAAACGATACC+AGG + Chr8:11039572-11039591 None:intergenic 60.0%
ATTCGCCACGCGAATGCCAC+AGG - Chr8:11035520-11035539 MsG0880042588.01.T01:CDS 60.0%
CTGGAGTGGATGGGAGAGAG+AGG + Chr8:11034426-11034445 None:intergenic 60.0%
GCCTTCACTGGGATTACCCG+AGG - Chr8:11037496-11037515 MsG0880042588.01.T01:intron 60.0%
GTGTAGCCGACCCCACTTAG+TGG - Chr8:11035303-11035322 MsG0880042588.01.T01:intron 60.0%
GTGTTCCTGTGGCATTCGCG+TGG + Chr8:11035528-11035547 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 11034256 11040148 11034256 ID=MsG0880042588.01;Name=MsG0880042588.01
Chr8 mRNA 11034256 11040148 11034256 ID=MsG0880042588.01.T01;Parent=MsG0880042588.01;Name=MsG0880042588.01.T01;_AED=0.45;_eAED=0.45;_QI=62|0.90|0.91|1|0.72|0.75|12|231|347
Chr8 exon 11034256 11034605 11034256 ID=MsG0880042588.01.T01:exon:4557;Parent=MsG0880042588.01.T01
Chr8 exon 11035016 11035064 11035016 ID=MsG0880042588.01.T01:exon:4556;Parent=MsG0880042588.01.T01
Chr8 exon 11035139 11035189 11035139 ID=MsG0880042588.01.T01:exon:4555;Parent=MsG0880042588.01.T01
Chr8 exon 11035312 11035375 11035312 ID=MsG0880042588.01.T01:exon:4554;Parent=MsG0880042588.01.T01
Chr8 exon 11035478 11035554 11035478 ID=MsG0880042588.01.T01:exon:4553;Parent=MsG0880042588.01.T01
Chr8 exon 11035910 11036029 11035910 ID=MsG0880042588.01.T01:exon:4552;Parent=MsG0880042588.01.T01
Chr8 exon 11037152 11037228 11037152 ID=MsG0880042588.01.T01:exon:4551;Parent=MsG0880042588.01.T01
Chr8 exon 11037363 11037418 11037363 ID=MsG0880042588.01.T01:exon:4550;Parent=MsG0880042588.01.T01
Chr8 exon 11037960 11038001 11037960 ID=MsG0880042588.01.T01:exon:4549;Parent=MsG0880042588.01.T01
Chr8 exon 11038811 11038944 11038811 ID=MsG0880042588.01.T01:exon:4548;Parent=MsG0880042588.01.T01
Chr8 exon 11039734 11039861 11039734 ID=MsG0880042588.01.T01:exon:4547;Parent=MsG0880042588.01.T01
Chr8 exon 11039960 11040148 11039960 ID=MsG0880042588.01.T01:exon:4546;Parent=MsG0880042588.01.T01
Chr8 five_prime_UTR 11040087 11040148 11040087 ID=MsG0880042588.01.T01:five_prime_utr;Parent=MsG0880042588.01.T01
Chr8 CDS 11039960 11040086 11039960 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 CDS 11039734 11039861 11039734 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 CDS 11038811 11038944 11038811 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 CDS 11037960 11038001 11037960 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 CDS 11037363 11037418 11037363 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 CDS 11037152 11037228 11037152 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 CDS 11035910 11036029 11035910 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 CDS 11035478 11035554 11035478 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 CDS 11035312 11035375 11035312 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 CDS 11035139 11035189 11035139 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 CDS 11035016 11035064 11035016 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 CDS 11034487 11034605 11034487 ID=MsG0880042588.01.T01:cds;Parent=MsG0880042588.01.T01
Chr8 three_prime_UTR 11034256 11034486 11034256 ID=MsG0880042588.01.T01:three_prime_utr;Parent=MsG0880042588.01.T01
Gene Sequence

>MsG0880042588.01.T01

ATGGTGGTTAACTCTATTCGTCTTCTTCTTCCTTCTTCACTCACTTCTCTCGTTCATCATCGCTCTCCCTATTCACGCCGTTTGCGTCCTTTTTCCATCTCTTTTCCTCTCTCTCCCATCCACTCCATTTCTTCCAATGGAATTGGTGATGTTGAATTACCAGTTGATCAATCACAAGTTATATTCATTGGAACTGGAACTAGTGAAGGAATTCCGAGAGTTAGCTGCTTGACTAATCCTTCTACTAAATGTCCGGTTTGTACAAAAGCTGCTAAACCGGGTGATAAGAATAGGAGACTTAACACAAGCATACTCATTCGCCACGCGAATGCCACAGGAACACACAATATTCTTATAGATGCTGGAAAGTATGTTTCAAATTTCTGTGTATTTTTCTATCACAGTGCTCTCCGGTGGTTTCCCGAATTTGGGATAAGAACACTTGATGCCGTTATTATTACTCATTCTCATGCTGATGCAATTGGAGGTCTTGATGATCTTAGAGACTGGACTAACAATGTTCAGCCCTCCATTCCAATTTATGTAGCCAAGCGTGACTTTGAGGTGATGAAGAAGACCCATTATTATTTAGTTGATACAAGTGTAATCATACCTGGTGCTGCGGTCTCAGCATTGCAATTCAATAGCATATCTGAAGAACCTTTTTTTGTACACGGATTGAAGTTTACTCCACTACCAGTGTGGCATGGTCAAGGTTATCGGTCCCTTGGTTTCCGTTTTGGTAATATATGTTACATAAGTGATGTCAGTGAAATTCCTGAAGAAACTTATCCACTTTTGAAGGACTGTGAACTTCTAATAATGGATGCTTTGAGGCCCGATCGCTCTTCAGCTACACATTTTGGACTTCCAAGGGCCTTAGAGGAAGTGAGAAAAATTCAACCCAAAAGGACACTTTTTACTGGTATGATGCATCTGATGGATCATGAAGAAGTGAATGACTACCTTACAAAATTATTGGAGTCTGAGGGCCTTGATGCGCAACTGAGCTATGATGGGCTTTGTATAGCAGTCAGACTCTAA

Protein sequence

>MsG0880042588.01.T01

MVVNSIRLLLPSSLTSLVHHRSPYSRRLRPFSISFPLSPIHSISSNGIGDVELPVDQSQVIFIGTGTSEGIPRVSCLTNPSTKCPVCTKAAKPGDKNRRLNTSILIRHANATGTHNILIDAGKYVSNFCVFFYHSALRWFPEFGIRTLDAVIITHSHADAIGGLDDLRDWTNNVQPSIPIYVAKRDFEVMKKTHYYLVDTSVIIPGAAVSALQFNSISEEPFFVHGLKFTPLPVWHGQGYRSLGFRFGNICYISDVSEIPEETYPLLKDCELLIMDALRPDRSSATHFGLPRALEEVRKIQPKRTLFTGMMHLMDHEEVNDYLTKLLESEGLDAQLSYDGLCIAVRL*