Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012528.01.T01 | RHN41449.1 | 66.265 | 83 | 27 | 1 | 1 | 83 | 33 | 114 | 1.92E-34 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012528.01.T01 | A0A396GJZ5 | 66.265 | 83 | 27 | 1 | 1 | 83 | 33 | 114 | 9.15e-35 | 124 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0380012528.01 | 0.812656 | 3.799574e-51 | 2.429672e-48 |
| MsG0080048964.01 | MsG0380012528.01 | 0.825013 | 5.908519e-54 | 5.321153e-51 |
| MsG0080049059.01 | MsG0380012528.01 | 0.807255 | 5.528018e-50 | 3.064381e-47 |
| MsG0180000799.01 | MsG0380012528.01 | 0.804187 | 2.435985e-49 | 1.247923e-46 |
| MsG0180000822.01 | MsG0380012528.01 | 0.815695 | 8.102589e-52 | 5.625951e-49 |
| MsG0180001599.01 | MsG0380012528.01 | 0.814837 | 1.256835e-51 | 8.524480e-49 |
| MsG0180001911.01 | MsG0380012528.01 | 0.804748 | 1.861552e-49 | 9.676021e-47 |
| MsG0180002491.01 | MsG0380012528.01 | 0.805661 | 1.198404e-49 | 6.376765e-47 |
| MsG0180003337.01 | MsG0380012528.01 | 0.806084 | 9.766889e-50 | 5.253621e-47 |
| MsG0180003409.01 | MsG0380012528.01 | 0.816818 | 4.544324e-52 | 3.253711e-49 |
| MsG0180003444.01 | MsG0380012528.01 | 0.805429 | 1.340634e-49 | 7.091036e-47 |
| MsG0180003627.01 | MsG0380012528.01 | 0.803724 | 3.040417e-49 | 1.539150e-46 |
| MsG0180003864.01 | MsG0380012528.01 | 0.820622 | 6.224646e-53 | 4.949977e-50 |
| MsG0180003977.01 | MsG0380012528.01 | 0.811938 | 5.450997e-51 | 3.419041e-48 |
| MsG0180004005.01 | MsG0380012528.01 | 0.811703 | 6.131504e-51 | 3.821948e-48 |
| MsG0180004180.01 | MsG0380012528.01 | 0.803145 | 4.008305e-49 | 1.999115e-46 |
| MsG0180004388.01 | MsG0380012528.01 | 0.819525 | 1.109623e-52 | 8.559850e-50 |
| MsG0180004767.01 | MsG0380012528.01 | 0.813337 | 2.693746e-51 | 1.754301e-48 |
| MsG0180005125.01 | MsG0380012528.01 | 0.822107 | 2.827451e-53 | 2.344224e-50 |
| MsG0180005233.01 | MsG0380012528.01 | 0.804393 | 2.207189e-49 | 1.136691e-46 |
| MsG0180005765.01 | MsG0380012528.01 | 0.838855 | 2.243802e-57 | 3.043826e-54 |
| MsG0180005842.01 | MsG0380012528.01 | 0.824320 | 8.603924e-54 | 7.594804e-51 |
| MsG0180005860.01 | MsG0380012528.01 | 0.803165 | 3.970045e-49 | 1.981134e-46 |
| MsG0180005878.01 | MsG0380012528.01 | 0.839633 | 1.410262e-57 | 1.959188e-54 |
| MsG0180005944.01 | MsG0380012528.01 | 0.838922 | 2.156155e-57 | 2.930793e-54 |
| MsG0180006013.01 | MsG0380012528.01 | 0.821824 | 3.287041e-53 | 2.703598e-50 |
| MsG0180006016.01 | MsG0380012528.01 | 0.832537 | 8.932973e-56 | 1.001422e-52 |
| MsG0180006069.01 | MsG0380012528.01 | 0.805295 | 1.430012e-49 | 7.537792e-47 |
| MsG0180006128.01 | MsG0380012528.01 | 0.800218 | 1.597994e-48 | 7.399239e-46 |
| MsG0180006235.01 | MsG0380012528.01 | 0.848198 | 7.141838e-60 | 1.300342e-56 |
| MsG0280006313.01 | MsG0380012528.01 | 0.849317 | 3.494517e-60 | 6.599300e-57 |
| MsG0280010614.01 | MsG0380012528.01 | 0.816190 | 6.283299e-52 | 4.422270e-49 |
| MsG0280011070.01 | MsG0380012528.01 | 0.834296 | 3.253809e-56 | 3.845194e-53 |
| MsG0280011141.01 | MsG0380012528.01 | 0.833832 | 4.252334e-56 | 4.955573e-53 |
| MsG0280011235.01 | MsG0380012528.01 | 0.811381 | 7.202694e-51 | 4.451761e-48 |
| MsG0280011293.01 | MsG0380012528.01 | 0.811168 | 8.012453e-51 | 4.924409e-48 |
| MsG0280011446.01 | MsG0380012528.01 | 0.831669 | 1.464279e-55 | 1.599966e-52 |
| MsG0380011729.01 | MsG0380012528.01 | 0.806325 | 8.689648e-50 | 4.702925e-47 |
| MsG0380012528.01 | MsG0380013754.01 | 0.834995 | 2.170484e-56 | 2.619181e-53 |
| MsG0380012528.01 | MsG0380013834.01 | 0.802089 | 6.619246e-49 | 3.213762e-46 |
| MsG0380012528.01 | MsG0380014259.01 | 0.805726 | 1.161693e-49 | 6.191989e-47 |
| MsG0380012528.01 | MsG0380014365.01 | 0.809950 | 1.468422e-50 | 8.739226e-48 |
| MsG0380012528.01 | MsG0380015512.01 | 0.815053 | 1.125897e-51 | 7.680792e-49 |
| MsG0380012528.01 | MsG0380015713.01 | 0.805134 | 1.545815e-49 | 8.114636e-47 |
| MsG0380012528.01 | MsG0380015779.01 | 0.836591 | 8.552767e-57 | 1.082757e-53 |
| MsG0380012528.01 | MsG0380016227.01 | 0.844781 | 6.112835e-59 | 9.976337e-56 |
| MsG0380012528.01 | MsG0380016483.01 | 0.801563 | 8.487878e-49 | 4.066290e-46 |
| MsG0380012528.01 | MsG0380016752.01 | 0.856261 | 3.625960e-62 | 8.602974e-59 |
| MsG0380012528.01 | MsG0380016765.01 | 0.834636 | 2.673220e-56 | 3.191128e-53 |
| MsG0380012528.01 | MsG0380016859.01 | 0.816982 | 4.174905e-52 | 3.002903e-49 |
| MsG0380012528.01 | MsG0380016971.01 | 0.839937 | 1.175429e-57 | 1.648469e-54 |
| MsG0380012528.01 | MsG0380017285.01 | 0.804788 | 1.825756e-49 | 9.499441e-47 |
| MsG0380012528.01 | MsG0380017375.01 | 0.831319 | 1.785215e-55 | 1.930427e-52 |
| MsG0380012528.01 | MsG0380017403.01 | 0.839678 | 1.372627e-57 | 1.909452e-54 |
| MsG0380012528.01 | MsG0380017604.01 | 0.828016 | 1.136298e-54 | 1.115695e-51 |
| MsG0380012528.01 | MsG0380017631.01 | 0.812902 | 3.356319e-51 | 2.160254e-48 |
| MsG0380012528.01 | MsG0480018126.01 | 0.857106 | 2.045319e-62 | 4.991884e-59 |
| MsG0380012528.01 | MsG0480018462.01 | 0.818707 | 1.702900e-52 | 1.284142e-49 |
| MsG0380012528.01 | MsG0480018640.01 | 0.803284 | 3.751738e-49 | 1.877816e-46 |
| MsG0380012528.01 | MsG0480018641.01 | 0.832066 | 1.168179e-55 | 1.291456e-52 |
| MsG0380012528.01 | MsG0480018970.01 | 0.845358 | 4.269742e-59 | 7.097279e-56 |
| MsG0380012528.01 | MsG0480019816.01 | 0.817646 | 2.959905e-52 | 2.167846e-49 |
| MsG0380012528.01 | MsG0480020065.01 | 0.814793 | 1.285485e-51 | 8.708494e-49 |
| MsG0380012528.01 | MsG0480020331.01 | 0.801604 | 8.323627e-49 | 3.991607e-46 |
| MsG0380012528.01 | MsG0480020372.01 | 0.811795 | 5.854957e-51 | 3.658574e-48 |
| MsG0380012528.01 | MsG0480020591.01 | 0.851099 | 1.106300e-60 | 2.214579e-57 |
| MsG0380012528.01 | MsG0480020720.01 | 0.811758 | 5.963311e-51 | 3.722641e-48 |
| MsG0380012528.01 | MsG0480021215.01 | 0.822698 | 2.060971e-53 | 1.737887e-50 |
| MsG0380012528.01 | MsG0480021772.01 | 0.824555 | 7.576682e-54 | 6.734097e-51 |
| MsG0380012528.01 | MsG0480021953.01 | 0.849620 | 2.877139e-60 | 5.486848e-57 |
| MsG0380012528.01 | MsG0480022146.01 | 0.838705 | 2.453633e-57 | 3.313503e-54 |
| MsG0380012528.01 | MsG0480022467.01 | 0.831800 | 1.359123e-55 | 1.491012e-52 |
| MsG0380012528.01 | MsG0480022480.01 | 0.849139 | 3.916527e-60 | 7.354780e-57 |
| MsG0380012528.01 | MsG0480022678.01 | 0.812683 | 3.746805e-51 | 2.397769e-48 |
| MsG0380012528.01 | MsG0480022971.01 | 0.808338 | 3.253579e-50 | 1.855484e-47 |
| MsG0380012528.01 | MsG0480023224.01 | 0.800353 | 1.500011e-48 | 6.969510e-46 |
| MsG0380012528.01 | MsG0480023245.01 | 0.833302 | 5.766681e-56 | 6.614233e-53 |
| MsG0380012528.01 | MsG0480023412.01 | 0.840791 | 7.029146e-58 | 1.012283e-54 |
| MsG0380012528.01 | MsG0480023517.01 | 0.812746 | 3.629988e-51 | 2.326845e-48 |
| MsG0380012528.01 | MsG0480023554.01 | 0.804547 | 2.049961e-49 | 1.059913e-46 |
| MsG0380012528.01 | MsG0480023600.01 | 0.817260 | 3.616154e-52 | 2.620546e-49 |
| MsG0380012528.01 | MsG0480023707.01 | 0.820561 | 6.427233e-53 | 5.102793e-50 |
| MsG0380012528.01 | MsG0480023873.01 | 0.803912 | 2.778969e-49 | 1.413722e-46 |
| MsG0380012528.01 | MsG0580024353.01 | 0.819587 | 1.074026e-52 | 8.299698e-50 |
| MsG0380012528.01 | MsG0580024458.01 | -0.801506 | 8.719482e-49 | 4.171295e-46 |
| MsG0380012528.01 | MsG0580024618.01 | 0.803736 | 3.023958e-49 | 1.531300e-46 |
| MsG0380012528.01 | MsG0580024733.01 | 0.805357 | 1.387987e-49 | 7.328057e-47 |
| MsG0380012528.01 | MsG0580025134.01 | 0.823377 | 1.430976e-53 | 1.229889e-50 |
| MsG0380012528.01 | MsG0580025989.01 | 0.817285 | 3.569184e-52 | 2.588332e-49 |
| MsG0380012528.01 | MsG0580026771.01 | 0.839241 | 1.783049e-57 | 2.447490e-54 |
| MsG0380012528.01 | MsG0580027169.01 | 0.810222 | 1.282982e-50 | 7.689433e-48 |
| MsG0380012528.01 | MsG0580027345.01 | 0.809268 | 2.058322e-50 | 1.203028e-47 |
| MsG0380012528.01 | MsG0580029189.01 | 0.816684 | 4.870242e-52 | 3.474183e-49 |
| MsG0380012528.01 | MsG0580029594.01 | 0.843026 | 1.804745e-58 | 2.786886e-55 |
| MsG0380012528.01 | MsG0580029661.01 | 0.809660 | 1.695412e-50 | 1.001368e-47 |
| MsG0380012528.01 | MsG0580029762.01 | 0.828820 | 7.269456e-55 | 7.305935e-52 |
| MsG0380012528.01 | MsG0580030235.01 | 0.858554 | 7.609037e-63 | 1.949415e-59 |
| MsG0380012528.01 | MsG0680030685.01 | 0.836810 | 7.524118e-57 | 9.588863e-54 |
| MsG0380012528.01 | MsG0680031651.01 | 0.868393 | 6.748941e-66 | 2.437220e-62 |
| MsG0380012528.01 | MsG0680034061.01 | 0.810084 | 1.374186e-50 | 8.206667e-48 |
| MsG0380012528.01 | MsG0780036609.01 | 0.803500 | 3.384756e-49 | 1.703663e-46 |
| MsG0380012528.01 | MsG0780037895.01 | 0.808820 | 2.567031e-50 | 1.482472e-47 |
| MsG0380012528.01 | MsG0780038495.01 | 0.825172 | 5.418976e-54 | 4.902350e-51 |
| MsG0380012528.01 | MsG0780040360.01 | 0.818647 | 1.757658e-52 | 1.323219e-49 |
| MsG0380012528.01 | MsG0780040488.01 | 0.800007 | 1.763694e-48 | 8.122781e-46 |
| MsG0380012528.01 | MsG0780040505.01 | 0.801887 | 7.282862e-49 | 3.517943e-46 |
| MsG0380012528.01 | MsG0780040691.01 | 0.807984 | 3.869210e-50 | 2.186007e-47 |
| MsG0380012528.01 | MsG0780040861.01 | 0.858891 | 6.035050e-63 | 1.564046e-59 |
| MsG0380012528.01 | MsG0780041161.01 | 0.819168 | 1.338132e-52 | 1.022001e-49 |
| MsG0380012528.01 | MsG0780041368.01 | 0.805975 | 1.029403e-49 | 5.521921e-47 |
| MsG0380012528.01 | MsG0780041399.01 | 0.844488 | 7.329551e-59 | 1.185214e-55 |
| MsG0380012528.01 | MsG0780041469.01 | 0.821526 | 3.852273e-53 | 3.141652e-50 |
| MsG0380012528.01 | MsG0780041490.01 | 0.802436 | 5.615382e-49 | 2.750615e-46 |
| MsG0380012528.01 | MsG0780041754.01 | 0.812355 | 4.419551e-51 | 2.803918e-48 |
| MsG0380012528.01 | MsG0780041796.01 | 0.802205 | 6.265100e-49 | 3.050686e-46 |
| MsG0380012528.01 | MsG0880042543.01 | 0.837992 | 3.746323e-57 | 4.950546e-54 |
| MsG0380012528.01 | MsG0880042829.01 | 0.806267 | 8.937832e-50 | 4.830354e-47 |
| MsG0380012528.01 | MsG0880042848.01 | 0.816900 | 4.355746e-52 | 3.125719e-49 |
| MsG0380012528.01 | MsG0880042972.01 | 0.808570 | 2.902812e-50 | 1.665433e-47 |
| MsG0380012528.01 | MsG0880043163.01 | 0.815140 | 1.076675e-51 | 7.362301e-49 |
| MsG0380012528.01 | MsG0880043532.01 | 0.821669 | 3.570802e-53 | 2.923956e-50 |
| MsG0380012528.01 | MsG0880043592.01 | 0.807312 | 5.375032e-50 | 2.984135e-47 |
| MsG0380012528.01 | MsG0880044917.01 | 0.801631 | 8.220119e-49 | 3.944716e-46 |
| MsG0380012528.01 | MsG0880045619.01 | 0.808608 | 2.849278e-50 | 1.636299e-47 |
| MsG0380012528.01 | MsG0880046091.01 | 0.810911 | 9.110327e-51 | 5.561603e-48 |
| MsG0380012528.01 | MsG0880046113.01 | 0.823070 | 1.688550e-53 | 1.438933e-50 |
| MsG0380012528.01 | MsG0880046479.01 | 0.809097 | 2.238819e-50 | 1.302593e-47 |
| MsG0380012528.01 | MsG0880046733.01 | 0.820576 | 6.375983e-53 | 5.064104e-50 |
| MsG0380012528.01 | MsG0880046933.01 | 0.813367 | 2.652794e-51 | 1.729111e-48 |
| MsG0380012528.01 | MsG0880046973.01 | 0.817983 | 2.484212e-52 | 1.836286e-49 |
| MsG0380012528.01 | MsG0880047012.01 | 0.821694 | 3.523146e-53 | 2.887078e-50 |
| MsG0380012528.01 | MsG0880047016.01 | 0.814780 | 1.294035e-51 | 8.763155e-49 |
| MsG0380012528.01 | MsG0880047497.01 | 0.808164 | 3.542299e-50 | 2.010959e-47 |
| MsG0380012528.01 | MsG0880047590.01 | 0.835766 | 1.385951e-56 | 1.711536e-53 |
| MsG0280006595.01 | MsG0380012528.01 | 0.830054 | 3.644916e-55 | 3.797627e-52 |
| MsG0280006728.01 | MsG0380012528.01 | 0.816853 | 4.464584e-52 | 3.199664e-49 |
| MsG0280007071.01 | MsG0380012528.01 | 0.811917 | 5.506475e-51 | 3.451947e-48 |
| MsG0280007088.01 | MsG0380012528.01 | 0.834868 | 2.337019e-56 | 2.809262e-53 |
| MsG0280007089.01 | MsG0380012528.01 | 0.846074 | 2.728851e-59 | 4.641920e-56 |
| MsG0280007564.01 | MsG0380012528.01 | 0.814609 | 1.412121e-51 | 9.519053e-49 |
| MsG0280007609.01 | MsG0380012528.01 | 0.847365 | 1.211069e-59 | 2.147507e-56 |
| MsG0280007815.01 | MsG0380012528.01 | 0.801565 | 8.478782e-49 | 4.062144e-46 |
| MsG0280008286.01 | MsG0380012528.01 | 0.808181 | 3.513262e-50 | 1.995365e-47 |
| MsG0280008327.01 | MsG0380012528.01 | 0.808629 | 2.819377e-50 | 1.620031e-47 |
| MsG0280008556.01 | MsG0380012528.01 | 0.802739 | 4.863230e-49 | 2.400663e-46 |
| MsG0280008885.01 | MsG0380012528.01 | 0.806595 | 7.621694e-50 | 4.153327e-47 |
| MsG0280008971.01 | MsG0380012528.01 | 0.837863 | 4.042881e-57 | 5.321093e-54 |
| MsG0280009140.01 | MsG0380012528.01 | 0.841771 | 3.881463e-58 | 5.762680e-55 |
| MsG0280009235.01 | MsG0380012528.01 | 0.812706 | 3.704169e-51 | 2.371850e-48 |
| MsG0280010389.01 | MsG0380012528.01 | 0.856044 | 4.197609e-62 | 9.888009e-59 |
| MsG0280010447.01 | MsG0380012528.01 | 0.814399 | 1.571126e-51 | 1.053156e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012528.01.T01 | MTR_1g087510 | 67.797 | 59 | 19 | 0 | 25 | 83 | 114 | 172 | 1.79e-25 | 93.2 |
| MsG0380012528.01.T01 | MTR_6g465600 | 45.783 | 83 | 45 | 0 | 1 | 83 | 228 | 310 | 8.24e-25 | 94.4 |
| MsG0380012528.01.T01 | MTR_7g050355 | 53.030 | 66 | 31 | 0 | 10 | 75 | 160 | 225 | 5.03e-18 | 77.0 |
| MsG0380012528.01.T01 | MTR_1g052720 | 42.466 | 73 | 42 | 0 | 11 | 83 | 233 | 305 | 1.07e-17 | 75.1 |
| MsG0380012528.01.T01 | MTR_8g064960 | 61.364 | 44 | 17 | 0 | 1 | 44 | 56 | 99 | 8.35e-16 | 66.6 |
| MsG0380012528.01.T01 | MTR_0246s0040 | 43.333 | 60 | 33 | 1 | 3 | 62 | 230 | 288 | 5.18e-13 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 21 sgRNAs with CRISPR-Local
Find 26 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATTCCAGGAGTATTTC+TGG | 0.174413 | 3:-19267425 | MsG0380012528.01.T01:CDS |
| GTATACATGGAAAATGCTTT+TGG | 0.290966 | 3:-19267658 | None:intergenic |
| TGCTCCTTTGGTCAGCTTAC+GGG | 0.310186 | 3:+19267572 | None:intergenic |
| GAACTTTATAGTTGCTCCTT+TGG | 0.350273 | 3:+19267560 | None:intergenic |
| TTGCTCCTTTGGTCAGCTTA+CGG | 0.366158 | 3:+19267571 | None:intergenic |
| ACTATAAAGTTCGGTGTTAC+CGG | 0.377234 | 3:-19267549 | MsG0380012528.01.T01:CDS |
| CGGATCAAGTTATCAATTCC+AGG | 0.384857 | 3:-19267436 | MsG0380012528.01.T01:CDS |
| GCCTGCGTCTGGAAACGTTT+GGG | 0.414200 | 3:-19267463 | MsG0380012528.01.T01:CDS |
| AGAACAAGGATGCCTGCGTC+TGG | 0.423335 | 3:-19267474 | MsG0380012528.01.T01:CDS |
| TGCCTGCGTCTGGAAACGTT+TGG | 0.477125 | 3:-19267464 | MsG0380012528.01.T01:CDS |
| CATCGCAAAGTGCTTGCCAC+TGG | 0.500453 | 3:+19267595 | None:intergenic |
| GCAAAGTGCTTGCCACTGGC+CGG | 0.521123 | 3:+19267599 | None:intergenic |
| AAAGGAGCAACTATAAAGTT+CGG | 0.521811 | 3:-19267558 | MsG0380012528.01.T01:CDS |
| GTTCTCAGAATCAACATTGG+AGG | 0.530223 | 3:+19267492 | None:intergenic |
| CAATGTTGATTCTGAGAACA+AGG | 0.535839 | 3:-19267488 | MsG0380012528.01.T01:CDS |
| CTCAGAATCAACATTGGAGG+TGG | 0.555144 | 3:+19267495 | None:intergenic |
| CTTGTTCTCAGAATCAACAT+TGG | 0.555316 | 3:+19267489 | None:intergenic |
| TCCCAAACGTTTCCAGACGC+AGG | 0.563324 | 3:+19267462 | None:intergenic |
| TCTGGAAACGTTTGGGAAGG+CGG | 0.564815 | 3:-19267456 | MsG0380012528.01.T01:CDS |
| GCGTCTGGAAACGTTTGGGA+AGG | 0.592286 | 3:-19267459 | MsG0380012528.01.T01:CDS |
| GATGCCCGTAAGCTGACCAA+AGG | 0.662152 | 3:-19267576 | MsG0380012528.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAAGGAGCAACTATAAAGTT+CGG | - | Chr3:19267503-19267522 | MsG0380012528.01.T01:CDS | 30.0% | |
| ! | AATTTTTCCAGAAATACTCC+TGG | + | Chr3:19267646-19267665 | None:intergenic | 30.0% |
| ! | TTGGATTTTTGTCATGATGA+TGG | - | Chr3:19267422-19267441 | MsG0380012528.01.T01:CDS | 30.0% |
| CTTGTTCTCAGAATCAACAT+TGG | + | Chr3:19267575-19267594 | None:intergenic | 35.0% | |
| GAACTTTATAGTTGCTCCTT+TGG | + | Chr3:19267504-19267523 | None:intergenic | 35.0% | |
| !! | ACTATAAAGTTCGGTGTTAC+CGG | - | Chr3:19267512-19267531 | MsG0380012528.01.T01:CDS | 35.0% |
| !! | ATCAATTCCAGGAGTATTTC+TGG | - | Chr3:19267636-19267655 | MsG0380012528.01.T01:CDS | 35.0% |
| !! | CAATGTTGATTCTGAGAACA+AGG | - | Chr3:19267573-19267592 | MsG0380012528.01.T01:CDS | 35.0% |
| CGGATCAAGTTATCAATTCC+AGG | - | Chr3:19267625-19267644 | MsG0380012528.01.T01:CDS | 40.0% | |
| GTTCTCAGAATCAACATTGG+AGG | + | Chr3:19267572-19267591 | None:intergenic | 40.0% | |
| !!! | AACCTTGTTTTTAGCTGCTC+CGG | + | Chr3:19267534-19267553 | None:intergenic | 40.0% |
| CTCAGAATCAACATTGGAGG+TGG | + | Chr3:19267569-19267588 | None:intergenic | 45.0% | |
| TACCGGAGCAGCTAAAAACA+AGG | - | Chr3:19267529-19267548 | MsG0380012528.01.T01:CDS | 45.0% | |
| TTGCTCCTTTGGTCAGCTTA+CGG | + | Chr3:19267493-19267512 | None:intergenic | 45.0% | |
| !!! | GGTGTGTCATGCACTTTTTC+CGG | - | Chr3:19267443-19267462 | MsG0380012528.01.T01:CDS | 45.0% |
| TCTGGAAACGTTTGGGAAGG+CGG | - | Chr3:19267605-19267624 | MsG0380012528.01.T01:CDS | 50.0% | |
| TGCTCCTTTGGTCAGCTTAC+GGG | + | Chr3:19267492-19267511 | None:intergenic | 50.0% | |
| AGAACAAGGATGCCTGCGTC+TGG | - | Chr3:19267587-19267606 | MsG0380012528.01.T01:CDS | 55.0% | |
| GATGCCCGTAAGCTGACCAA+AGG | - | Chr3:19267485-19267504 | MsG0380012528.01.T01:CDS | 55.0% | |
| GCCTGCGTCTGGAAACGTTT+GGG | - | Chr3:19267598-19267617 | MsG0380012528.01.T01:CDS | 55.0% | |
| GCGTCTGGAAACGTTTGGGA+AGG | - | Chr3:19267602-19267621 | MsG0380012528.01.T01:CDS | 55.0% | |
| TCCCAAACGTTTCCAGACGC+AGG | + | Chr3:19267602-19267621 | None:intergenic | 55.0% | |
| TGCCTGCGTCTGGAAACGTT+TGG | - | Chr3:19267597-19267616 | MsG0380012528.01.T01:CDS | 55.0% | |
| ! | CATCGCAAAGTGCTTGCCAC+TGG | + | Chr3:19267469-19267488 | None:intergenic | 55.0% |
| !!! | CATGCACTTTTTCCGGCCAG+TGG | - | Chr3:19267450-19267469 | MsG0380012528.01.T01:CDS | 55.0% |
| ! | GCAAAGTGCTTGCCACTGGC+CGG | + | Chr3:19267465-19267484 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 19267416 | 19267667 | 19267416 | ID=MsG0380012528.01;Name=MsG0380012528.01 |
| Chr3 | mRNA | 19267416 | 19267667 | 19267416 | ID=MsG0380012528.01.T01;Parent=MsG0380012528.01;Name=MsG0380012528.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|83 |
| Chr3 | exon | 19267416 | 19267667 | 19267416 | ID=MsG0380012528.01.T01:exon:18418;Parent=MsG0380012528.01.T01 |
| Chr3 | CDS | 19267416 | 19267667 | 19267416 | ID=MsG0380012528.01.T01:cds;Parent=MsG0380012528.01.T01 |
| Gene Sequence |
| Protein sequence |
