Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045920 | sp|Q5VNM3|IF43A_ORYSJ | 85.195 | 385 | 54 | 1 | 7 | 388 | 20 | 404 | 0.0 | 696 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015610 | Msa0045920 | 0.826135 | 3.203661e-54 | -8.615850e-47 |
| Msa0020930 | Msa0045920 | 0.823352 | 1.450872e-53 | -8.615850e-47 |
| Msa0034110 | Msa0045920 | 0.833893 | 4.105352e-56 | -8.615850e-47 |
| Msa0036140 | Msa0045920 | 0.825050 | 5.791620e-54 | -8.615850e-47 |
| Msa0037570 | Msa0045920 | -0.804137 | 2.495039e-49 | -8.615850e-47 |
| Msa0044260 | Msa0045920 | 0.824723 | 6.914541e-54 | -8.615850e-47 |
| Msa0044330 | Msa0045920 | 0.815736 | 7.932736e-52 | -8.615850e-47 |
| Msa0045920 | Msa0074700 | 0.814019 | 1.906313e-51 | -8.615850e-47 |
| Msa0045920 | Msa0078900 | 0.823539 | 1.311976e-53 | -8.615850e-47 |
| Msa0045920 | Msa0083280 | 0.813003 | 3.188338e-51 | -8.615850e-47 |
| Msa0045920 | Msa0114060 | 0.829256 | 5.698467e-55 | -8.615850e-47 |
| Msa0045920 | Msa0147510 | 0.811744 | 6.006771e-51 | -8.615850e-47 |
| Msa0045920 | Msa0159930 | 0.831526 | 1.588060e-55 | -8.615850e-47 |
| Msa0045920 | Msa0166870 | 0.800068 | 1.714434e-48 | -8.615850e-47 |
| Msa0045920 | Msa0171540 | 0.807391 | 5.171688e-50 | -8.615850e-47 |
| Msa0045920 | Msa0174110 | 0.826200 | 3.090778e-54 | -8.615850e-47 |
| Msa0045920 | Msa0197660 | 0.801414 | 9.106473e-49 | -8.615850e-47 |
| Msa0045920 | Msa0217680 | 0.838237 | 3.240609e-57 | -8.615850e-47 |
| Msa0045920 | Msa0220580 | 0.807310 | 5.380459e-50 | -8.615850e-47 |
| Msa0045920 | Msa0239800 | 0.800745 | 1.247701e-48 | -8.615850e-47 |
| Msa0045920 | Msa0241390 | 0.817029 | 4.075930e-52 | -8.615850e-47 |
| Msa0045920 | Msa0257500 | 0.816844 | 4.485776e-52 | -8.615850e-47 |
| Msa0045920 | Msa0260680 | 0.803110 | 4.075266e-49 | -8.615850e-47 |
| Msa0045920 | Msa0265380 | 0.820968 | 5.182619e-53 | -8.615850e-47 |
| Msa0045920 | Msa0279220 | 0.817747 | 2.809392e-52 | -8.615850e-47 |
| Msa0045920 | Msa0279240 | 0.821774 | 3.377154e-53 | -8.615850e-47 |
| Msa0045920 | Msa0280090 | 0.829242 | 5.744014e-55 | -8.615850e-47 |
| Msa0045920 | Msa0288100 | 0.803213 | 3.880205e-49 | -8.615850e-47 |
| Msa0045920 | Msa0303360 | 0.816968 | 4.207159e-52 | -8.615850e-47 |
| Msa0045920 | Msa0309770 | 0.838660 | 2.520326e-57 | -8.615850e-47 |
| Msa0045920 | Msa0318980 | 0.843934 | 1.032420e-58 | -8.615850e-47 |
| Msa0045920 | Msa0383800 | 0.809701 | 1.661771e-50 | -8.615850e-47 |
| Msa0045920 | Msa0388280 | 0.804118 | 2.518484e-49 | -8.615850e-47 |
| Msa0045920 | Msa0395970 | 0.800006 | 1.764203e-48 | -8.615850e-47 |
| Msa0045920 | Msa0412840 | 0.817046 | 4.040629e-52 | -8.615850e-47 |
| Msa0045920 | Msa0437960 | 0.904612 | 1.023213e-79 | -8.615850e-47 |
| Msa0045920 | Msa0457510 | 0.802573 | 5.261382e-49 | -8.615850e-47 |
| Msa0045920 | Msa0464120 | 0.802073 | 6.670969e-49 | -8.615850e-47 |
| Msa0045920 | Msa0477080 | 0.800886 | 1.167656e-48 | -8.615850e-47 |
| Msa0045920 | Msa0479970 | 0.810947 | 8.944597e-51 | -8.615850e-47 |
| Msa0045920 | Msa0481530 | 0.800275 | 1.555432e-48 | -8.615850e-47 |
| Msa0045920 | Msa0518380 | 0.801115 | 1.048262e-48 | -8.615850e-47 |
| Msa0045920 | Msa0529890 | 0.800122 | 1.671020e-48 | -8.615850e-47 |
| Msa0045920 | Msa0532350 | 0.802972 | 4.353542e-49 | -8.615850e-47 |
| Msa0045920 | Msa0545210 | 0.810185 | 1.307171e-50 | -8.615850e-47 |
| Msa0045920 | Msa0577500 | 0.803951 | 2.728511e-49 | -8.615850e-47 |
| Msa0045920 | Msa0585560 | 0.804568 | 2.029881e-49 | -8.615850e-47 |
| Msa0045920 | Msa0610430 | 0.807817 | 4.200070e-50 | -8.615850e-47 |
| Msa0045920 | Msa0617640 | 0.808419 | 3.126590e-50 | -8.615850e-47 |
| Msa0045920 | Msa0663390 | 0.816451 | 5.492478e-52 | -8.615850e-47 |
| Msa0045920 | Msa0673460 | 0.805394 | 1.363752e-49 | -8.615850e-47 |
| Msa0045920 | Msa0711100 | 0.817242 | 3.649782e-52 | -8.615850e-47 |
| Msa0045920 | Msa0724210 | 0.810078 | 1.378594e-50 | -8.615850e-47 |
| Msa0045920 | Msa0766630 | 0.800762 | 1.237623e-48 | -8.615850e-47 |
| Msa0045920 | Msa0773840 | 0.804987 | 1.659129e-49 | -8.615850e-47 |
| Msa0045920 | Msa0802010 | 0.816881 | 4.399041e-52 | -8.615850e-47 |
| Msa0045920 | Msa0802830 | 0.805605 | 1.231415e-49 | -8.615850e-47 |
| Msa0045920 | Msa0820850 | 0.805845 | 1.096564e-49 | -8.615850e-47 |
| Msa0045920 | Msa0827140 | 0.954120 | 6.043592e-112 | -8.615850e-47 |
| Msa0045920 | Msa0832150 | 0.820036 | 8.477502e-53 | -8.615850e-47 |
| Msa0045920 | Msa0861130 | 0.801234 | 9.914002e-49 | -8.615850e-47 |
| Msa0045920 | Msa0909110 | 0.807313 | 5.373848e-50 | -8.615850e-47 |
| Msa0045920 | Msa0935910 | 0.800665 | 1.295523e-48 | -8.615850e-47 |
| Msa0045920 | Msa1014540 | 0.807216 | 5.632898e-50 | -8.615850e-47 |
| Msa0045920 | Msa1035480 | 0.815039 | 1.133631e-51 | -8.615850e-47 |
| Msa0045920 | Msa1058170 | 0.815854 | 7.469765e-52 | -8.615850e-47 |
| Msa0045920 | Msa1061680 | 0.811990 | 5.309686e-51 | -8.615850e-47 |
| Msa0045920 | Msa1082500 | 0.820204 | 7.761456e-53 | -8.615850e-47 |
| Msa0045920 | Msa1089040 | 0.823153 | 1.614717e-53 | -8.615850e-47 |
| Msa0045920 | Msa1102790 | 0.821320 | 4.299618e-53 | -8.615850e-47 |
| Msa0045920 | Msa1170120 | 0.937466 | 3.309619e-98 | -8.615850e-47 |
| Msa0045920 | Msa1204530 | 0.825922 | 3.598183e-54 | -8.615850e-47 |
| Msa0045920 | Msa1204630 | 0.803733 | 3.027627e-49 | -8.615850e-47 |
| Msa0045920 | Msa1225210 | 0.944468 | 1.845808e-103 | -8.615850e-47 |
| Msa0045920 | Msa1228590 | 0.827552 | 1.468869e-54 | -8.615850e-47 |
| Msa0045920 | Msa1246510 | 0.821499 | 3.908933e-53 | -8.615850e-47 |
| Msa0045920 | Msa1296760 | 0.849777 | 2.600374e-60 | -8.615850e-47 |
| Msa0045920 | Msa1305340 | 0.803251 | 3.811357e-49 | -8.615850e-47 |
| Msa0045920 | Msa1306840 | 0.803865 | 2.842455e-49 | -8.615850e-47 |
| Msa0045920 | Msa1331000 | 0.825965 | 3.516100e-54 | -8.615850e-47 |
| Msa0045920 | Msa1331320 | 0.814052 | 1.874866e-51 | -8.615850e-47 |
| Msa0045920 | Msa1353980 | 0.810073 | 1.381507e-50 | -8.615850e-47 |
| Msa0045920 | Msa1373030 | 0.843201 | 1.621196e-58 | -8.615850e-47 |
| Msa0045920 | Msa1397120 | 0.812389 | 4.345912e-51 | -8.615850e-47 |
| Msa0045920 | Msa1403340 | 0.821408 | 4.102851e-53 | -8.615850e-47 |
| Msa0045920 | Msa1403890 | 0.822830 | 1.920092e-53 | -8.615850e-47 |
| Msa0045920 | Msa1404300 | 0.803739 | 3.018527e-49 | -8.615850e-47 |
| Msa0045920 | Msa1412640 | 0.807953 | 3.929501e-50 | -8.615850e-47 |
| Msa0045920 | Msa1426470 | 0.813143 | 2.972076e-51 | -8.615850e-47 |
| Msa0045920 | Msa1430680 | 0.814009 | 1.916535e-51 | -8.615850e-47 |
| Msa0045920 | Msa1443880 | 0.807117 | 5.910958e-50 | -8.615850e-47 |
| Msa0045920 | Msa1460050 | 0.854442 | 1.227425e-61 | -8.615850e-47 |
| Msa0045920 | Msa1464900 | 0.912513 | 1.786316e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045920 | MtrunA17_Chr2g0297261 | 91.146 | 384 | 31 | 1 | 8 | 388 | 23 | 406 | 0.0 | 724 |
| Msa0045920 | MtrunA17_Chr2g0299681 | 63.271 | 373 | 134 | 1 | 19 | 388 | 41 | 413 | 4.64e-178 | 501 |
| Msa0045920 | MtrunA17_Chr2g0329931 | 61.765 | 374 | 140 | 1 | 18 | 388 | 40 | 413 | 1.95e-176 | 497 |
| Msa0045920 | MtrunA17_Chr4g0070981 | 62.466 | 373 | 137 | 1 | 19 | 388 | 41 | 413 | 5.81e-176 | 496 |
| Msa0045920 | MtrunA17_Chr8g0342861 | 61.394 | 373 | 141 | 1 | 19 | 388 | 41 | 413 | 8.75e-175 | 493 |
| Msa0045920 | MtrunA17_Chr1g0169331 | 42.386 | 394 | 187 | 6 | 34 | 388 | 6 | 398 | 8.36e-103 | 309 |
| Msa0045920 | MtrunA17_Chr8g0342851 | 43.440 | 343 | 161 | 4 | 51 | 388 | 5 | 319 | 5.78e-90 | 274 |
| Msa0045920 | MtrunA17_Chr7g0247191 | 38.082 | 365 | 221 | 3 | 20 | 381 | 151 | 513 | 1.24e-85 | 269 |
| Msa0045920 | MtrunA17_Chr7g0247181 | 37.534 | 365 | 223 | 3 | 20 | 381 | 141 | 503 | 2.61e-85 | 268 |
| Msa0045920 | MtrunA17_Chr7g0247221 | 37.534 | 365 | 223 | 3 | 20 | 381 | 144 | 506 | 3.07e-85 | 268 |
| Msa0045920 | MtrunA17_Chr4g0003441 | 35.938 | 384 | 233 | 9 | 12 | 384 | 99 | 480 | 6.72e-69 | 225 |
| Msa0045920 | MtrunA17_Chr2g0330401 | 33.058 | 363 | 232 | 4 | 17 | 369 | 94 | 455 | 2.13e-68 | 224 |
| Msa0045920 | MtrunA17_Chr5g0442191 | 31.552 | 393 | 251 | 9 | 8 | 386 | 68 | 456 | 1.87e-62 | 210 |
| Msa0045920 | MtrunA17_Chr1g0149251 | 35.417 | 336 | 208 | 7 | 57 | 384 | 2 | 336 | 2.15e-62 | 204 |
| Msa0045920 | MtrunA17_Chr3g0107851 | 32.620 | 374 | 231 | 7 | 17 | 371 | 115 | 486 | 3.84e-61 | 206 |
| Msa0045920 | MtrunA17_Chr7g0270131 | 31.436 | 404 | 247 | 9 | 1 | 382 | 217 | 612 | 8.03e-61 | 209 |
| Msa0045920 | MtrunA17_Chr4g0076491 | 29.517 | 393 | 248 | 5 | 7 | 371 | 275 | 666 | 3.23e-59 | 204 |
| Msa0045920 | MtrunA17_Chr3g0095031 | 32.376 | 383 | 241 | 9 | 13 | 381 | 82 | 460 | 1.56e-58 | 199 |
| Msa0045920 | MtrunA17_Chr2g0293631 | 33.243 | 370 | 230 | 7 | 19 | 372 | 496 | 864 | 2.14e-58 | 205 |
| Msa0045920 | MtrunA17_Chr1g0179761 | 33.163 | 392 | 227 | 12 | 19 | 377 | 80 | 469 | 3.65e-58 | 197 |
| Msa0045920 | MtrunA17_Chr3g0121351 | 32.391 | 389 | 235 | 8 | 9 | 370 | 133 | 520 | 7.36e-58 | 199 |
| Msa0045920 | MtrunA17_Chr6g0449741 | 29.262 | 393 | 247 | 6 | 7 | 371 | 237 | 626 | 1.08e-57 | 199 |
| Msa0045920 | MtrunA17_Chr7g0236841 | 29.759 | 373 | 255 | 4 | 17 | 383 | 8 | 379 | 7.40e-57 | 192 |
| Msa0045920 | MtrunA17_Chr6g0483491 | 29.759 | 373 | 255 | 4 | 17 | 383 | 8 | 379 | 9.23e-57 | 192 |
| Msa0045920 | MtrunA17_Chr1g0193491 | 32.665 | 349 | 216 | 6 | 22 | 355 | 117 | 461 | 3.15e-56 | 194 |
| Msa0045920 | MtrunA17_Chr7g0271121 | 36.550 | 342 | 196 | 11 | 46 | 371 | 132 | 468 | 1.03e-55 | 195 |
| Msa0045920 | MtrunA17_Chr6g0449911 | 32.153 | 367 | 229 | 9 | 17 | 369 | 163 | 523 | 2.20e-55 | 194 |
| Msa0045920 | MtrunA17_Chr4g0063551 | 32.361 | 377 | 227 | 6 | 20 | 369 | 141 | 516 | 2.38e-54 | 190 |
| Msa0045920 | MtrunA17_Chr1g0176041 | 30.423 | 378 | 236 | 7 | 17 | 369 | 152 | 527 | 3.17e-53 | 186 |
| Msa0045920 | MtrunA17_Chr2g0277821 | 32.353 | 374 | 222 | 7 | 17 | 369 | 502 | 865 | 1.09e-51 | 186 |
| Msa0045920 | MtrunA17_Chr4g0040761 | 30.295 | 373 | 249 | 6 | 18 | 381 | 18 | 388 | 2.49e-51 | 183 |
| Msa0045920 | MtrunA17_Chr1g0200181 | 31.593 | 364 | 228 | 7 | 16 | 361 | 142 | 502 | 2.70e-51 | 181 |
| Msa0045920 | MtrunA17_Chr1g0157691 | 30.102 | 392 | 252 | 8 | 16 | 388 | 144 | 532 | 1.40e-50 | 179 |
| Msa0045920 | MtrunA17_Chr2g0310581 | 29.708 | 377 | 255 | 4 | 10 | 377 | 44 | 419 | 8.29e-50 | 175 |
| Msa0045920 | MtrunA17_Chr7g0263771 | 30.729 | 384 | 251 | 6 | 15 | 387 | 125 | 504 | 2.36e-48 | 173 |
| Msa0045920 | MtrunA17_Chr3g0098121 | 30.933 | 375 | 243 | 7 | 8 | 369 | 140 | 511 | 5.31e-48 | 174 |
| Msa0045920 | MtrunA17_Chr5g0409981 | 30.899 | 356 | 229 | 5 | 17 | 357 | 102 | 455 | 3.36e-47 | 168 |
| Msa0045920 | MtrunA17_Chr4g0058591 | 32.051 | 312 | 206 | 2 | 16 | 321 | 199 | 510 | 6.68e-47 | 167 |
| Msa0045920 | MtrunA17_Chr6g0461751 | 29.474 | 380 | 237 | 10 | 12 | 369 | 131 | 501 | 1.15e-45 | 164 |
| Msa0045920 | MtrunA17_Chr2g0300291 | 30.053 | 376 | 246 | 8 | 8 | 369 | 129 | 501 | 3.45e-42 | 157 |
| Msa0045920 | MtrunA17_Chr2g0309551 | 26.651 | 424 | 249 | 8 | 16 | 377 | 106 | 529 | 5.86e-42 | 154 |
| Msa0045920 | MtrunA17_Chr8g0347161 | 29.695 | 394 | 235 | 13 | 20 | 385 | 103 | 482 | 8.47e-42 | 154 |
| Msa0045920 | MtrunA17_Chr8g0347171 | 29.293 | 396 | 238 | 12 | 20 | 387 | 161 | 542 | 3.75e-41 | 153 |
| Msa0045920 | MtrunA17_Chr8g0347151 | 27.665 | 394 | 237 | 11 | 20 | 382 | 202 | 578 | 8.06e-41 | 152 |
| Msa0045920 | MtrunA17_Chr2g0307471 | 27.688 | 372 | 247 | 9 | 13 | 367 | 85 | 451 | 1.01e-39 | 148 |
| Msa0045920 | MtrunA17_Chr6g0466611 | 27.749 | 382 | 247 | 8 | 16 | 371 | 139 | 517 | 2.12e-39 | 149 |
| Msa0045920 | MtrunA17_Chr3g0114081 | 27.248 | 367 | 236 | 8 | 22 | 358 | 19 | 384 | 1.84e-38 | 145 |
| Msa0045920 | MtrunA17_Chr4g0062301 | 28.412 | 359 | 234 | 10 | 31 | 371 | 109 | 462 | 2.10e-38 | 145 |
| Msa0045920 | MtrunA17_Chr8g0386451 | 27.020 | 396 | 237 | 13 | 20 | 382 | 289 | 665 | 1.09e-37 | 144 |
| Msa0045920 | MtrunA17_Chr6g0475251 | 30.027 | 373 | 208 | 13 | 15 | 355 | 102 | 453 | 3.95e-36 | 139 |
| Msa0045920 | MtrunA17_Chr1g0204391 | 29.076 | 368 | 223 | 7 | 22 | 355 | 47 | 410 | 2.94e-35 | 136 |
| Msa0045920 | MtrunA17_Chr7g0236831 | 25.120 | 418 | 234 | 11 | 19 | 358 | 163 | 579 | 3.92e-34 | 134 |
| Msa0045920 | MtrunA17_Chr5g0443991 | 30.581 | 327 | 212 | 7 | 46 | 358 | 102 | 427 | 7.75e-34 | 133 |
| Msa0045920 | MtrunA17_Chr4g0034411 | 29.499 | 339 | 223 | 8 | 46 | 370 | 102 | 438 | 2.62e-33 | 131 |
| Msa0045920 | MtrunA17_Chr4g0025141 | 33.824 | 204 | 117 | 5 | 192 | 377 | 14 | 217 | 8.63e-31 | 117 |
| Msa0045920 | MtrunA17_Chr3g0137901 | 38.415 | 164 | 96 | 3 | 225 | 384 | 10 | 172 | 4.22e-30 | 114 |
| Msa0045920 | MtrunA17_Chr1g0192021 | 24.524 | 420 | 255 | 10 | 10 | 372 | 17 | 431 | 6.25e-30 | 121 |
| Msa0045920 | MtrunA17_Chr2g0301281 | 23.684 | 456 | 261 | 13 | 11 | 382 | 33 | 485 | 1.28e-28 | 117 |
| Msa0045920 | MtrunA17_Chr4g0029191 | 25.000 | 460 | 257 | 14 | 10 | 382 | 30 | 488 | 1.70e-28 | 117 |
| Msa0045920 | MtrunA17_Chr3g0145781 | 25.641 | 390 | 254 | 10 | 16 | 369 | 129 | 518 | 6.30e-26 | 109 |
| Msa0045920 | MtrunA17_Chr4g0025131 | 34.783 | 161 | 100 | 3 | 19 | 175 | 56 | 215 | 2.67e-23 | 98.6 |
| Msa0045920 | MtrunA17_Chr4g0004301 | 25.000 | 392 | 206 | 9 | 56 | 369 | 70 | 451 | 3.57e-22 | 98.2 |
| Msa0045920 | MtrunA17_Chr5g0429221 | 22.432 | 370 | 264 | 8 | 17 | 372 | 1 | 361 | 5.21e-22 | 97.1 |
| Msa0045920 | MtrunA17_Chr4g0039471 | 26.829 | 205 | 147 | 1 | 11 | 212 | 215 | 419 | 2.82e-21 | 94.7 |
| Msa0045920 | MtrunA17_Chr8g0349951 | 34.307 | 137 | 89 | 1 | 17 | 152 | 8 | 144 | 6.42e-21 | 88.6 |
| Msa0045920 | MtrunA17_Chr4g0062321 | 28.436 | 211 | 146 | 4 | 121 | 327 | 25 | 234 | 1.37e-20 | 90.1 |
| Msa0045920 | MtrunA17_Chr3g0137891 | 32.716 | 162 | 106 | 3 | 57 | 215 | 2 | 163 | 3.10e-20 | 88.6 |
| Msa0045920 | MtrunA17_Chr4g0025101 | 29.386 | 228 | 100 | 8 | 176 | 380 | 7 | 196 | 1.14e-18 | 84.0 |
| Msa0045920 | MtrunA17_Chr4g0074521 | 25.000 | 368 | 217 | 13 | 25 | 347 | 88 | 441 | 4.56e-18 | 85.9 |
| Msa0045920 | MtrunA17_Chr5g0402301 | 25.789 | 190 | 106 | 5 | 232 | 388 | 26 | 213 | 5.47e-13 | 67.8 |
| Msa0045920 | MtrunA17_Chr1g0155201 | 25.200 | 250 | 163 | 9 | 130 | 372 | 5 | 237 | 1.93e-12 | 67.8 |
| Msa0045920 | MtrunA17_Chr2g0300871 | 22.515 | 342 | 215 | 12 | 34 | 347 | 36 | 355 | 2.19e-11 | 65.5 |
| Msa0045920 | MtrunA17_Chr8g0377041 | 30.000 | 100 | 67 | 1 | 254 | 350 | 489 | 588 | 3.79e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0045920 | AT3G19760.1 | 83.333 | 384 | 61 | 1 | 8 | 388 | 25 | 408 | 0.0 | 678 |
| Msa0045920 | AT1G51380.1 | 70.833 | 384 | 106 | 2 | 8 | 388 | 12 | 392 | 0.0 | 583 |
| Msa0045920 | AT3G13920.3 | 63.102 | 374 | 135 | 1 | 18 | 388 | 29 | 402 | 2.82e-179 | 504 |
| Msa0045920 | AT3G13920.1 | 63.102 | 374 | 135 | 1 | 18 | 388 | 39 | 412 | 3.60e-179 | 504 |
| Msa0045920 | AT1G54270.1 | 62.032 | 374 | 139 | 1 | 18 | 388 | 39 | 412 | 9.13e-176 | 496 |
| Msa0045920 | AT1G72730.1 | 61.394 | 373 | 141 | 1 | 19 | 388 | 42 | 414 | 3.47e-173 | 489 |
| Msa0045920 | AT3G13920.4 | 62.032 | 374 | 134 | 2 | 18 | 388 | 39 | 407 | 4.89e-173 | 489 |
| Msa0045920 | AT1G54270.2 | 60.963 | 374 | 138 | 2 | 18 | 388 | 39 | 407 | 1.22e-169 | 480 |
| Msa0045920 | AT3G13920.5 | 64.205 | 352 | 123 | 1 | 18 | 366 | 43 | 394 | 1.84e-169 | 480 |
| Msa0045920 | AT3G13920.2 | 64.205 | 352 | 123 | 1 | 18 | 366 | 39 | 390 | 2.15e-169 | 480 |
| Msa0045920 | AT1G51380.2 | 73.384 | 263 | 70 | 0 | 8 | 270 | 12 | 274 | 9.54e-148 | 419 |
| Msa0045920 | AT1G51380.4 | 72.973 | 222 | 60 | 0 | 8 | 229 | 12 | 233 | 3.83e-119 | 348 |
| Msa0045920 | AT1G51380.3 | 72.973 | 222 | 60 | 0 | 8 | 229 | 12 | 233 | 6.13e-119 | 347 |
| Msa0045920 | AT4G00660.1 | 37.903 | 372 | 226 | 3 | 20 | 388 | 133 | 502 | 1.27e-87 | 274 |
| Msa0045920 | AT4G00660.2 | 37.903 | 372 | 226 | 3 | 20 | 388 | 133 | 502 | 1.27e-87 | 274 |
| Msa0045920 | AT3G61240.2 | 36.828 | 372 | 230 | 3 | 20 | 388 | 126 | 495 | 8.96e-85 | 266 |
| Msa0045920 | AT3G61240.1 | 36.828 | 372 | 230 | 3 | 20 | 388 | 126 | 495 | 8.96e-85 | 266 |
| Msa0045920 | AT2G45810.1 | 36.712 | 365 | 226 | 3 | 20 | 381 | 156 | 518 | 6.11e-82 | 260 |
| Msa0045920 | AT5G11170.1 | 35.509 | 383 | 236 | 8 | 12 | 384 | 38 | 419 | 1.65e-70 | 228 |
| Msa0045920 | AT5G11200.1 | 35.509 | 383 | 236 | 8 | 12 | 384 | 38 | 419 | 1.65e-70 | 228 |
| Msa0045920 | AT1G55150.1 | 35.977 | 353 | 211 | 6 | 17 | 357 | 98 | 447 | 2.86e-69 | 226 |
| Msa0045920 | AT1G55150.2 | 34.795 | 365 | 223 | 6 | 17 | 369 | 123 | 484 | 3.31e-69 | 227 |
| Msa0045920 | AT3G53110.1 | 34.545 | 385 | 226 | 11 | 20 | 380 | 93 | 475 | 3.45e-68 | 223 |
| Msa0045920 | AT5G63120.2 | 35.165 | 364 | 225 | 5 | 16 | 369 | 163 | 525 | 1.28e-64 | 216 |
| Msa0045920 | AT3G01540.1 | 35.000 | 380 | 230 | 7 | 17 | 380 | 157 | 535 | 1.01e-62 | 212 |
| Msa0045920 | AT3G01540.4 | 35.000 | 380 | 230 | 7 | 17 | 380 | 157 | 535 | 1.10e-62 | 212 |
| Msa0045920 | AT3G01540.2 | 35.000 | 380 | 230 | 7 | 17 | 380 | 157 | 535 | 1.10e-62 | 212 |
| Msa0045920 | AT3G01540.3 | 35.000 | 380 | 230 | 7 | 17 | 380 | 157 | 535 | 1.10e-62 | 212 |
| Msa0045920 | AT5G11200.3 | 32.075 | 424 | 236 | 9 | 12 | 384 | 38 | 460 | 3.18e-62 | 207 |
| Msa0045920 | AT5G14610.5 | 33.947 | 380 | 234 | 7 | 17 | 380 | 168 | 546 | 7.06e-62 | 210 |
| Msa0045920 | AT3G06480.1 | 35.079 | 382 | 227 | 7 | 19 | 382 | 436 | 814 | 7.68e-62 | 215 |
| Msa0045920 | AT5G14610.6 | 33.947 | 380 | 234 | 7 | 17 | 380 | 160 | 538 | 9.08e-62 | 210 |
| Msa0045920 | AT5G14610.2 | 33.947 | 380 | 234 | 7 | 17 | 380 | 160 | 538 | 9.72e-62 | 210 |
| Msa0045920 | AT5G11170.2 | 35.435 | 333 | 206 | 7 | 57 | 381 | 2 | 333 | 1.43e-61 | 202 |
| Msa0045920 | AT2G33730.1 | 30.280 | 393 | 245 | 4 | 7 | 371 | 302 | 693 | 7.30e-61 | 209 |
| Msa0045920 | AT3G22330.1 | 31.649 | 376 | 239 | 9 | 19 | 381 | 105 | 475 | 2.71e-60 | 206 |
| Msa0045920 | AT3G22310.2 | 31.536 | 371 | 238 | 7 | 23 | 381 | 121 | 487 | 1.14e-59 | 203 |
| Msa0045920 | AT3G22310.1 | 31.536 | 371 | 238 | 7 | 23 | 381 | 121 | 487 | 1.49e-59 | 203 |
| Msa0045920 | AT2G47330.1 | 31.347 | 386 | 245 | 7 | 17 | 387 | 227 | 607 | 2.13e-59 | 206 |
| Msa0045920 | AT5G14610.7 | 33.791 | 364 | 224 | 7 | 33 | 380 | 45 | 407 | 4.57e-58 | 197 |
| Msa0045920 | AT5G14610.3 | 33.791 | 364 | 224 | 7 | 33 | 380 | 45 | 407 | 4.57e-58 | 197 |
| Msa0045920 | AT5G26742.1 | 32.216 | 388 | 240 | 9 | 19 | 388 | 103 | 485 | 9.47e-57 | 198 |
| Msa0045920 | AT5G26742.2 | 32.216 | 388 | 240 | 9 | 19 | 388 | 103 | 485 | 9.57e-57 | 198 |
| Msa0045920 | AT5G14610.1 | 33.880 | 366 | 225 | 7 | 31 | 380 | 242 | 606 | 1.29e-56 | 197 |
| Msa0045920 | AT5G26742.3 | 34.349 | 361 | 213 | 10 | 47 | 388 | 37 | 392 | 2.47e-56 | 196 |
| Msa0045920 | AT5G60990.1 | 30.184 | 381 | 249 | 5 | 17 | 381 | 8 | 387 | 1.24e-55 | 189 |
| Msa0045920 | AT3G58510.1 | 32.041 | 387 | 238 | 8 | 9 | 371 | 140 | 525 | 1.51e-55 | 192 |
| Msa0045920 | AT3G58510.3 | 32.041 | 387 | 238 | 8 | 9 | 371 | 140 | 525 | 1.51e-55 | 192 |
| Msa0045920 | AT3G58510.2 | 32.041 | 387 | 238 | 8 | 9 | 371 | 140 | 525 | 1.51e-55 | 192 |
| Msa0045920 | AT2G42520.2 | 32.011 | 378 | 234 | 8 | 17 | 371 | 158 | 535 | 1.61e-55 | 193 |
| Msa0045920 | AT2G42520.1 | 32.011 | 378 | 234 | 8 | 17 | 371 | 158 | 535 | 1.61e-55 | 193 |
| Msa0045920 | AT2G42520.3 | 32.011 | 378 | 234 | 8 | 17 | 371 | 158 | 535 | 1.61e-55 | 193 |
| Msa0045920 | AT3G09720.2 | 34.930 | 355 | 220 | 6 | 22 | 369 | 145 | 495 | 6.46e-55 | 189 |
| Msa0045920 | AT3G09720.1 | 34.930 | 355 | 220 | 6 | 22 | 369 | 145 | 495 | 6.46e-55 | 189 |
| Msa0045920 | AT1G20920.2 | 32.432 | 370 | 227 | 7 | 17 | 369 | 190 | 553 | 2.72e-54 | 192 |
| Msa0045920 | AT1G77030.1 | 29.459 | 370 | 252 | 6 | 20 | 381 | 30 | 398 | 2.75e-53 | 189 |
| Msa0045920 | AT4G33370.1 | 31.538 | 390 | 245 | 8 | 17 | 387 | 96 | 482 | 8.45e-53 | 184 |
| Msa0045920 | AT1G20920.4 | 31.443 | 388 | 243 | 7 | 17 | 387 | 528 | 909 | 9.69e-53 | 189 |
| Msa0045920 | AT1G20920.6 | 31.443 | 388 | 243 | 7 | 17 | 387 | 528 | 909 | 9.69e-53 | 189 |
| Msa0045920 | AT1G20920.3 | 31.443 | 388 | 243 | 7 | 17 | 387 | 528 | 909 | 9.69e-53 | 189 |
| Msa0045920 | AT1G20920.7 | 31.443 | 388 | 243 | 7 | 17 | 387 | 528 | 909 | 9.69e-53 | 189 |
| Msa0045920 | AT1G20920.5 | 31.443 | 388 | 243 | 7 | 17 | 387 | 528 | 909 | 9.69e-53 | 189 |
| Msa0045920 | AT1G20920.1 | 31.443 | 388 | 243 | 7 | 17 | 387 | 528 | 909 | 9.69e-53 | 189 |
| Msa0045920 | AT3G58570.1 | 30.159 | 378 | 241 | 7 | 17 | 371 | 145 | 522 | 6.11e-52 | 183 |
| Msa0045920 | AT5G51280.1 | 32.507 | 363 | 224 | 7 | 17 | 361 | 145 | 504 | 2.85e-51 | 181 |
| Msa0045920 | AT1G28180.1 | 32.544 | 338 | 210 | 7 | 48 | 371 | 2 | 335 | 4.08e-51 | 175 |
| Msa0045920 | AT1G16280.1 | 30.585 | 376 | 239 | 8 | 11 | 371 | 51 | 419 | 1.16e-50 | 177 |
| Msa0045920 | AT3G02065.3 | 29.076 | 368 | 243 | 7 | 17 | 369 | 109 | 473 | 4.99e-48 | 171 |
| Msa0045920 | AT3G02065.2 | 29.076 | 368 | 243 | 7 | 17 | 369 | 109 | 473 | 4.99e-48 | 171 |
| Msa0045920 | AT5G14610.4 | 32.907 | 313 | 203 | 5 | 17 | 323 | 168 | 479 | 1.08e-47 | 169 |
| Msa0045920 | AT3G06480.2 | 33.866 | 313 | 196 | 5 | 19 | 323 | 436 | 745 | 8.55e-47 | 171 |
| Msa0045920 | AT1G31970.1 | 30.352 | 369 | 234 | 7 | 10 | 357 | 103 | 469 | 1.10e-46 | 167 |
| Msa0045920 | AT5G63120.1 | 32.484 | 314 | 204 | 4 | 15 | 321 | 162 | 474 | 2.50e-46 | 166 |
| Msa0045920 | AT5G63120.3 | 32.588 | 313 | 203 | 4 | 16 | 321 | 163 | 474 | 2.79e-46 | 165 |
| Msa0045920 | AT5G63120.4 | 32.588 | 313 | 203 | 4 | 16 | 321 | 163 | 474 | 2.79e-46 | 165 |
| Msa0045920 | AT5G63120.5 | 32.588 | 313 | 203 | 4 | 16 | 321 | 163 | 474 | 2.79e-46 | 165 |
| Msa0045920 | AT1G12770.2 | 26.761 | 426 | 247 | 7 | 16 | 378 | 108 | 531 | 3.98e-46 | 166 |
| Msa0045920 | AT1G12770.1 | 26.761 | 426 | 247 | 7 | 16 | 378 | 108 | 531 | 3.98e-46 | 166 |
| Msa0045920 | AT5G63630.1 | 28.429 | 401 | 235 | 12 | 20 | 387 | 56 | 437 | 2.54e-45 | 163 |
| Msa0045920 | AT4G16630.1 | 31.081 | 370 | 245 | 5 | 8 | 367 | 156 | 525 | 3.64e-45 | 166 |
| Msa0045920 | AT5G08620.1 | 28.469 | 418 | 247 | 12 | 3 | 387 | 65 | 463 | 1.45e-44 | 162 |
| Msa0045920 | AT3G09620.2 | 30.130 | 385 | 217 | 9 | 17 | 384 | 396 | 745 | 2.09e-44 | 164 |
| Msa0045920 | AT3G09620.1 | 30.130 | 385 | 217 | 9 | 17 | 384 | 395 | 744 | 2.30e-44 | 164 |
| Msa0045920 | AT5G08610.1 | 29.426 | 401 | 231 | 12 | 20 | 387 | 384 | 765 | 2.57e-44 | 164 |
| Msa0045920 | AT3G02065.1 | 29.290 | 338 | 221 | 7 | 47 | 369 | 2 | 336 | 8.57e-44 | 156 |
| Msa0045920 | AT5G63630.2 | 28.429 | 401 | 235 | 12 | 20 | 387 | 250 | 631 | 1.34e-43 | 161 |
| Msa0045920 | AT3G18600.1 | 28.649 | 370 | 246 | 7 | 12 | 367 | 83 | 448 | 4.84e-43 | 158 |
| Msa0045920 | AT5G05450.1 | 28.771 | 358 | 227 | 8 | 28 | 358 | 26 | 382 | 3.30e-41 | 153 |
| Msa0045920 | AT5G65900.1 | 27.778 | 396 | 256 | 8 | 18 | 388 | 154 | 544 | 4.71e-41 | 153 |
| Msa0045920 | AT1G71370.1 | 28.732 | 355 | 234 | 8 | 22 | 358 | 20 | 373 | 4.62e-40 | 150 |
| Msa0045920 | AT1G63250.1 | 29.064 | 406 | 239 | 13 | 9 | 382 | 319 | 707 | 1.04e-39 | 150 |
| Msa0045920 | AT2G07750.1 | 28.571 | 413 | 232 | 13 | 9 | 382 | 366 | 754 | 1.62e-38 | 147 |
| Msa0045920 | AT5G62190.1 | 29.539 | 369 | 219 | 8 | 15 | 357 | 96 | 449 | 6.27e-38 | 145 |
| Msa0045920 | AT5G54910.1 | 27.568 | 370 | 251 | 8 | 16 | 371 | 69 | 435 | 2.10e-36 | 141 |
| Msa0045920 | AT4G09730.1 | 25.714 | 385 | 249 | 9 | 17 | 371 | 111 | 488 | 1.17e-35 | 138 |
| Msa0045920 | AT5G11200.2 | 31.907 | 257 | 159 | 7 | 12 | 263 | 38 | 283 | 2.36e-31 | 124 |
| Msa0045920 | AT5G11200.2 | 36.782 | 174 | 104 | 4 | 216 | 384 | 306 | 478 | 2.62e-27 | 113 |
| Msa0045920 | AT4G34910.1 | 25.962 | 416 | 248 | 11 | 16 | 374 | 44 | 456 | 3.91e-31 | 125 |
| Msa0045920 | AT2G40700.1 | 25.000 | 444 | 249 | 12 | 13 | 372 | 25 | 468 | 4.90e-31 | 125 |
| Msa0045920 | AT3G06980.1 | 25.888 | 394 | 253 | 10 | 13 | 369 | 369 | 760 | 2.60e-27 | 114 |
| Msa0045920 | AT1G71280.2 | 26.752 | 314 | 192 | 8 | 22 | 323 | 21 | 308 | 4.08e-25 | 105 |
| Msa0045920 | AT1G71280.1 | 26.415 | 318 | 196 | 8 | 22 | 327 | 21 | 312 | 8.37e-25 | 105 |
| Msa0045920 | AT4G15850.1 | 23.454 | 388 | 206 | 12 | 56 | 364 | 73 | 448 | 1.14e-20 | 94.0 |
| Msa0045920 | AT3G16840.1 | 26.486 | 185 | 112 | 4 | 29 | 189 | 201 | 385 | 2.53e-14 | 75.1 |
| Msa0045920 | AT3G16840.1 | 26.667 | 135 | 91 | 2 | 250 | 376 | 490 | 624 | 2.24e-11 | 66.2 |
| Msa0045920 | AT3G16840.2 | 26.486 | 185 | 112 | 4 | 29 | 189 | 202 | 386 | 2.62e-14 | 75.1 |
| Msa0045920 | AT3G16840.2 | 26.667 | 135 | 91 | 2 | 250 | 376 | 491 | 625 | 2.26e-11 | 66.2 |
| Msa0045920 | AT1G28180.2 | 30.769 | 117 | 72 | 2 | 48 | 155 | 2 | 118 | 1.26e-12 | 64.7 |
| Msa0045920 | AT1G27880.2 | 29.412 | 119 | 81 | 1 | 254 | 369 | 483 | 601 | 1.72e-12 | 69.7 |
| Msa0045920 | AT1G27880.1 | 29.412 | 119 | 81 | 1 | 254 | 369 | 483 | 601 | 2.63e-12 | 68.9 |
| Msa0045920 | AT4G37020.1 | 21.762 | 193 | 112 | 5 | 233 | 388 | 22 | 212 | 8.66e-11 | 61.6 |
Find 91 sgRNAs with CRISPR-Local
Find 433 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAACTGAAAATGTTATTT+TGG | 0.151334 | 1_1:-77912633 | Msa0045920:CDS |
| TGTTGCTGATCTTATATAAA+AGG | 0.182863 | 1_1:-77910065 | Msa0045920:exon |
| ATGTACAGCTCTCGATTATT+TGG | 0.242192 | 1_1:+77910330 | None:intergenic |
| TACGCTACCTCATGAAATTT+TGG | 0.254057 | 1_1:-77911768 | Msa0045920:CDS |
| TGACAGTAGAAGAAAGGTTT+AGG | 0.287979 | 1_1:+77916917 | None:intergenic |
| TGCCGTTCTACCTATCATTC+AGG | 0.291705 | 1_1:-77916744 | Msa0045920:CDS |
| AAGAGAAAGAGATGCAATTA+TGG | 0.315960 | 1_1:-77911295 | Msa0045920:CDS |
| GTCAAATTTATGCTAGGAAT+TGG | 0.320658 | 1_1:-77910010 | Msa0045920:three_prime_UTR |
| ATTGGCCGTTCTGGACGTTT+TGG | 0.323765 | 1_1:-77910300 | Msa0045920:CDS |
| TATTGATAACGACTGATGTT+TGG | 0.325693 | 1_1:-77911245 | Msa0045920:CDS |
| ATATCTCCCTCCGGATCTTC+AGG | 0.332541 | 1_1:-77912298 | Msa0045920:intron |
| GACAGTAGAAGAAAGGTTTA+GGG | 0.333950 | 1_1:+77916918 | None:intergenic |
| TTGTAATTTGAACAGGTTGC+AGG | 0.352767 | 1_1:-77912690 | Msa0045920:intron |
| CCACCTTGCATGTAAGATAA+TGG | 0.364408 | 1_1:+77909820 | None:intergenic |
| ATTCATCGGATTGGCCGTTC+TGG | 0.374179 | 1_1:-77910309 | Msa0045920:CDS |
| ATTGCATCTCTTTCTCTTTG+AGG | 0.376417 | 1_1:+77911300 | None:intergenic |
| GATTGCTCTCACTGTTTGCC+AGG | 0.377469 | 1_1:-77916672 | Msa0045920:CDS |
| ATTGATAACGACTGATGTTT+GGG | 0.390146 | 1_1:-77911244 | Msa0045920:CDS |
| TGTGTCTCCGACAAGGGAAT+TGG | 0.408057 | 1_1:-77912660 | Msa0045920:CDS |
| CTTATGAAACTCTTGACATA+TGG | 0.410214 | 1_1:-77909948 | Msa0045920:three_prime_UTR |
| AGCAATCATGGAGGACTTGC+CGG | 0.434474 | 1_1:+77916688 | None:intergenic |
| ACGTCACGACCCTGAATGAT+AGG | 0.436959 | 1_1:+77916734 | None:intergenic |
| CATGTAGTGTCGGGGACTCC+TGG | 0.441130 | 1_1:-77912521 | Msa0045920:CDS |
| TGTGAGGCCAATTCCCTTGT+CGG | 0.444766 | 1_1:+77912653 | None:intergenic |
| AAGGTTTCTCAAAACCGTAT+TGG | 0.451081 | 1_1:+77916783 | None:intergenic |
| GTCATCGCTCAGTCTCAATC+TGG | 0.453284 | 1_1:-77916713 | Msa0045920:CDS |
| CTACTGTCACTCAGCGGCTA+TGG | 0.454362 | 1_1:-77916903 | Msa0045920:exon |
| CCTCATGATTACAGGGCATC+AGG | 0.461625 | 1_1:-77911613 | Msa0045920:intron |
| CTGCGTGGAATTTACCAATA+CGG | 0.462856 | 1_1:-77916797 | Msa0045920:CDS |
| CACGGAGTTCATGTAGTGTC+GGG | 0.464753 | 1_1:-77912530 | Msa0045920:CDS |
| GTTTAGGGTTTCTATCAAGT+TGG | 0.471948 | 1_1:+77916933 | None:intergenic |
| GCAAACAGTGAGAGCAATCA+TGG | 0.475280 | 1_1:+77916676 | None:intergenic |
| ACGACTGATGTTTGGGCTCG+TGG | 0.476458 | 1_1:-77911237 | Msa0045920:CDS |
| CGAGCACATGCATGCATTGG+AGG | 0.480977 | 1_1:-77912587 | Msa0045920:CDS |
| GCTCAGTCTCAATCTGGAAC+CGG | 0.482872 | 1_1:-77916707 | Msa0045920:CDS |
| GTTGCTGATCTTATATAAAA+GGG | 0.485003 | 1_1:-77910064 | Msa0045920:exon |
| TAGAACGGCACGCTGTTGAA+TGG | 0.489358 | 1_1:+77916757 | None:intergenic |
| GATTCAGAGCTTCGATAAGA+TGG | 0.496481 | 1_1:-77916837 | Msa0045920:CDS |
| AGCTATCAAGTTGCTTGTGC+TGG | 0.499944 | 1_1:-77912456 | Msa0045920:intron |
| TCACTCAGCGGCTATGGCTA+TGG | 0.502793 | 1_1:-77916897 | Msa0045920:exon |
| GTAAGGTGAACCTGAAGATC+CGG | 0.506742 | 1_1:+77912288 | None:intergenic |
| TCGACTGAACCCAGGGATGA+AGG | 0.510337 | 1_1:-77909904 | Msa0045920:three_prime_UTR |
| AAGAGGAACTCACTCTTTGA+CGG | 0.515459 | 1_1:+77916637 | None:intergenic |
| TGCATTGGAGGCAAAAGCGT+TGG | 0.520539 | 1_1:-77912575 | Msa0045920:CDS |
| ATCGAGAGCTGTACATTCAT+CGG | 0.523237 | 1_1:-77910323 | Msa0045920:CDS |
| GCCGTTCTACCTATCATTCA+GGG | 0.525768 | 1_1:-77916743 | Msa0045920:CDS |
| AAAAGTAAACCTTCATCCCT+GGG | 0.526364 | 1_1:+77909895 | None:intergenic |
| GTGTTTGTCAAATTTATGCT+AGG | 0.528416 | 1_1:-77910016 | Msa0045920:three_prime_UTR |
| GAGTCCTTGACATGATCAAA+AGG | 0.531974 | 1_1:-77912496 | Msa0045920:CDS |
| TTATGTTGATGTTGAAAGGG+AGG | 0.536096 | 1_1:-77911585 | Msa0045920:CDS |
| TTTAATTGTGTCTCCGACAA+GGG | 0.538538 | 1_1:-77912666 | Msa0045920:CDS |
| CTTTAATTGTGTCTCCGACA+AGG | 0.539027 | 1_1:-77912667 | Msa0045920:CDS |
| GCACGCTGTTGAATGGATGA+AGG | 0.539674 | 1_1:+77916764 | None:intergenic |
| GAGCTGTACATTCATCGGAT+TGG | 0.543246 | 1_1:-77910318 | Msa0045920:CDS |
| TGTCCATTATCTTACATGCA+AGG | 0.543686 | 1_1:-77909823 | Msa0045920:three_prime_UTR |
| ATACGAGCACATGCATGCAT+TGG | 0.549970 | 1_1:-77912590 | Msa0045920:CDS |
| TTGTTTGCTCGACTGAACCC+AGG | 0.550223 | 1_1:-77909912 | Msa0045920:three_prime_UTR |
| AAGGGCAATGCAGTATATGT+TGG | 0.553284 | 1_1:-77910046 | Msa0045920:three_prime_UTR |
| TCAAAGCTTCGAGACATCGA+AGG | 0.553831 | 1_1:-77916870 | Msa0045920:CDS |
| ATCATGTCAAGGACTCGGCC+AGG | 0.564010 | 1_1:+77912503 | None:intergenic |
| GCTGAGTGACAGTAGAAGAA+AGG | 0.568231 | 1_1:+77916911 | None:intergenic |
| AAAATTAATCTCAGCCGTAT+CGG | 0.568278 | 1_1:+77909868 | None:intergenic |
| ATAAGATCAGCAACATTCAT+CGG | 0.575456 | 1_1:+77910073 | None:intergenic |
| ATTCAGAGCTTCGATAAGAT+GGG | 0.579850 | 1_1:-77916836 | Msa0045920:CDS |
| ACGTGATGAATTGACATTGG+AGG | 0.580038 | 1_1:-77911699 | Msa0045920:intron |
| TGTTTGCTCGACTGAACCCA+GGG | 0.581642 | 1_1:-77909911 | Msa0045920:three_prime_UTR |
| ATTATGGATGAATTTCGTGC+TGG | 0.582575 | 1_1:-77911279 | Msa0045920:CDS |
| AAAACGTGATGAATTGACAT+TGG | 0.590799 | 1_1:-77911702 | Msa0045920:CDS |
| ACACGGAGTTCATGTAGTGT+CGG | 0.591877 | 1_1:-77912531 | Msa0045920:CDS |
| TTGATGTTGAAAGGGAGGAA+TGG | 0.599804 | 1_1:-77911580 | Msa0045920:CDS |
| TTCACTATCTCATCAATGCA+CGG | 0.607282 | 1_1:-77911330 | Msa0045920:CDS |
| GTCATCTCCAAAATTTCATG+AGG | 0.612581 | 1_1:+77911761 | None:intergenic |
| ATTCTGTAACACCAAGCGAA+AGG | 0.615167 | 1_1:-77911501 | Msa0045920:intron |
| TGTGTATAGATATCTCCCTC+CGG | 0.617507 | 1_1:-77912307 | Msa0045920:CDS |
| GAATATAACAGCTTGAGTGA+TGG | 0.627409 | 1_1:+77911520 | None:intergenic |
| TTCGTCCAAAACGTCCAGAA+CGG | 0.636927 | 1_1:+77910295 | None:intergenic |
| ACCCTGAATGATAGGTAGAA+CGG | 0.644492 | 1_1:+77916742 | None:intergenic |
| CCATTATCTTACATGCAAGG+TGG | 0.645222 | 1_1:-77909820 | Msa0045920:three_prime_UTR |
| TGACGGAGGTATCAACAACC+TGG | 0.647609 | 1_1:+77916654 | None:intergenic |
| CAAAGCTTCGAGACATCGAA+GGG | 0.648344 | 1_1:-77916869 | Msa0045920:CDS |
| AGGTGAACCTGAAGATCCGG+AGG | 0.649252 | 1_1:+77912291 | None:intergenic |
| AGGAACTCACTCTTTGACGG+AGG | 0.657463 | 1_1:+77916640 | None:intergenic |
| ATCAAAGACGATTTACTGCG+TGG | 0.662617 | 1_1:-77916812 | Msa0045920:CDS |
| AAAGCGTTGGAGAAGACACA+AGG | 0.685686 | 1_1:-77912562 | Msa0045920:CDS |
| ACGGAGTTCATGTAGTGTCG+GGG | 0.690010 | 1_1:-77912529 | Msa0045920:CDS |
| GACACAAGGAAACTTGAACA+CGG | 0.692105 | 1_1:-77912548 | Msa0045920:CDS |
| TCTGATGAAATGCTGAGCAG+AGG | 0.698342 | 1_1:-77912351 | Msa0045920:CDS |
| GGTGAACCTGAAGATCCGGA+GGG | 0.711398 | 1_1:+77912292 | None:intergenic |
| AGTTTATGACAGATCCTGTG+AGG | 0.717164 | 1_1:-77911733 | Msa0045920:CDS |
| TTTCTTCTACTGTCACTCAG+CGG | 0.724602 | 1_1:-77916909 | Msa0045920:five_prime_UTR |
| AACAGTGAGAGCAATCATGG+AGG | 0.733411 | 1_1:+77916679 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTAATT+TGG | - | chr1_1:77912842-77912861 | Msa0045920:intron | 0.0% |
| !!! | TTTTACTTATATTACTTTTT+AGG | - | chr1_1:77912688-77912707 | Msa0045920:intron | 10.0% |
| !! | CTTTAATATATCTTTGAATA+AGG | - | chr1_1:77910401-77910420 | Msa0045920:intron | 15.0% |
| !! | AGTAAATTACATAGAAATTA+TGG | + | chr1_1:77911180-77911199 | None:intergenic | 15.0% |
| !! | AATTTCTATGTAATTTACTT+AGG | - | chr1_1:77911181-77911200 | Msa0045920:intron | 15.0% |
| !!! | GCTTTTAAAATATAATTTGT+GGG | + | chr1_1:77911229-77911248 | None:intergenic | 15.0% |
| !!! | TGCTTTTAAAATATAATTTG+TGG | + | chr1_1:77911230-77911249 | None:intergenic | 15.0% |
| !!! | TATACTTGATTTTTGAATTT+CGG | + | chr1_1:77911895-77911914 | None:intergenic | 15.0% |
| !! | ATATTTGATAAAAATGAGTT+CGG | - | chr1_1:77912016-77912035 | Msa0045920:intron | 15.0% |
| !!! | AATGTACTTATTTTAAAACA+TGG | - | chr1_1:77913693-77913712 | Msa0045920:intron | 15.0% |
| !!! | ATATTTTTCTTTTTTATTGC+AGG | - | chr1_1:77914332-77914351 | Msa0045920:intron | 15.0% |
| !!! | TTGTTTAATTTTTAATGTGT+AGG | - | chr1_1:77914904-77914923 | Msa0045920:intron | 15.0% |
| !! | AAGGTAAATGAAAATTATAA+AGG | - | chr1_1:77915229-77915248 | Msa0045920:intron | 15.0% |
| !!! | TAATATTTGTTTGTTATTAG+AGG | - | chr1_1:77916172-77916191 | Msa0045920:intron | 15.0% |
| !! | TAAGAAATGTAACAATTAAA+TGG | - | chr1_1:77916285-77916304 | Msa0045920:intron | 15.0% |
| !!! | AAGTTTTAGGTTGAATTTAT+TGG | - | chr1_1:77910151-77910170 | Msa0045920:CDS | 20.0% |
| !!! | TGAAGTTTTTTACTTTCTTT+AGG | - | chr1_1:77910192-77910211 | Msa0045920:intron | 20.0% |
| !!! | TTTTAAACATTTTGTCACTA+GGG | + | chr1_1:77910663-77910682 | None:intergenic | 20.0% |
| !!! | TATTTTAAAAGCAGACTAAT+TGG | - | chr1_1:77911237-77911256 | Msa0045920:CDS | 20.0% |
| !!! | ATGAAGGAAATTCATTTTTT+TGG | - | chr1_1:77911296-77911315 | Msa0045920:CDS | 20.0% |
| !!! | TTTTCATAATGAGAAACTAA+AGG | - | chr1_1:77911387-77911406 | Msa0045920:intron | 20.0% |
| !!! | AATTTATTTTACCACTTACT+CGG | + | chr1_1:77911554-77911573 | None:intergenic | 20.0% |
| !!! | GTAAGTGGTAAAATAAATTT+TGG | - | chr1_1:77911555-77911574 | Msa0045920:CDS | 20.0% |
| !!! | TGAAATTTGTATTAGTTTTG+CGG | - | chr1_1:77911661-77911680 | Msa0045920:intron | 20.0% |
| !!! | ATGAGAGTTTTAATTTTCTT+TGG | - | chr1_1:77911726-77911745 | Msa0045920:CDS | 20.0% |
| !!! | TGAGAGTTTTAATTTTCTTT+GGG | - | chr1_1:77911727-77911746 | Msa0045920:CDS | 20.0% |
| !! | CACAAAAAAATAGATGAATA+TGG | - | chr1_1:77911980-77911999 | Msa0045920:intron | 20.0% |
| !!! | GAAAAAAGTGTTAATGAATA+TGG | - | chr1_1:77912044-77912063 | Msa0045920:intron | 20.0% |
| !!! | GTTTTTTTTTTCAACAACTT+TGG | + | chr1_1:77912117-77912136 | None:intergenic | 20.0% |
| !! | ATCACTTAAAAATACACTTA+AGG | + | chr1_1:77912214-77912233 | None:intergenic | 20.0% |
| !! | ATTTGAATAAGGAATGTATT+TGG | - | chr1_1:77912354-77912373 | Msa0045920:CDS | 20.0% |
| !! | AATCAATTCAATATCTCATA+TGG | + | chr1_1:77912385-77912404 | None:intergenic | 20.0% |
| !! | AAGCTAGATTAATAATTTGA+TGG | + | chr1_1:77912554-77912573 | None:intergenic | 20.0% |
| !! | GTAATATAAGTAAAACATGA+AGG | + | chr1_1:77912683-77912702 | None:intergenic | 20.0% |
| !! | AAAATGATTAAAGATAGTGA+CGG | + | chr1_1:77913293-77913312 | None:intergenic | 20.0% |
| !! | GACTTATGAAATTTATTGAT+AGG | + | chr1_1:77913853-77913872 | None:intergenic | 20.0% |
| !! | AATAAATTTCATAAGTCAAG+AGG | - | chr1_1:77913856-77913875 | Msa0045920:intron | 20.0% |
| !! | ATAAATTTCATAAGTCAAGA+GGG | - | chr1_1:77913857-77913876 | Msa0045920:intron | 20.0% |
| !! | TCAAATTACAAAATTTCAGT+CGG | + | chr1_1:77914012-77914031 | None:intergenic | 20.0% |
| !!! | TGAAATTTTGTAATTTGAAC+AGG | - | chr1_1:77914014-77914033 | Msa0045920:intron | 20.0% |
| !!! | ACAAACTGAAAATGTTATTT+TGG | - | chr1_1:77914078-77914097 | Msa0045920:intron | 20.0% |
| !!! | AAAATGTTATTTTGGCAATT+GGG | - | chr1_1:77914086-77914105 | Msa0045920:intron | 20.0% |
| !! | AATTTGTCTGAATTAGAAAT+TGG | + | chr1_1:77914544-77914563 | None:intergenic | 20.0% |
| !! | TTTCTAATTCAGACAAATTT+AGG | - | chr1_1:77914545-77914564 | Msa0045920:intron | 20.0% |
| !! | ACAAATTTAGGTGATAAATA+GGG | - | chr1_1:77914557-77914576 | Msa0045920:intron | 20.0% |
| !!! | AATTTTATGTTGATGTTGAA+AGG | - | chr1_1:77915122-77915141 | Msa0045920:intron | 20.0% |
| !!! | ATTTTATGTTGATGTTGAAA+GGG | - | chr1_1:77915123-77915142 | Msa0045920:intron | 20.0% |
| !! | GAAAATTATAAAGGTTCTTT+AGG | - | chr1_1:77915238-77915257 | Msa0045920:intron | 20.0% |
| !!! | CTAGTCTTTATATTTACATA+TGG | - | chr1_1:77915292-77915311 | Msa0045920:intron | 20.0% |
| !! | TTATATTTACATATGGTGAT+TGG | - | chr1_1:77915299-77915318 | Msa0045920:intron | 20.0% |
| !!! | ATTGGTTATATATATCCTTT+TGG | - | chr1_1:77915317-77915336 | Msa0045920:intron | 20.0% |
| !! | TATTATTATTACATACAGCA+AGG | - | chr1_1:77916046-77916065 | Msa0045920:intron | 20.0% |
| !!! | TATTACTTGTTTCTTATAGT+TGG | - | chr1_1:77916509-77916528 | Msa0045920:intron | 20.0% |
| !!! | ATTACTTGTTTCTTATAGTT+GGG | - | chr1_1:77916510-77916529 | Msa0045920:intron | 20.0% |
| !!! | TTGCTATAAATTTTGTGAAA+AGG | - | chr1_1:77916555-77916574 | Msa0045920:intron | 20.0% |
| !!! | TGCTATAAATTTTGTGAAAA+GGG | - | chr1_1:77916556-77916575 | Msa0045920:intron | 20.0% |
| ! | GTTATGTTTCAATTAGCATT+CGG | - | chr1_1:77910118-77910137 | Msa0045920:CDS | 25.0% |
| !!! | TTAGGTTGAATTTATTGGTT+AGG | - | chr1_1:77910156-77910175 | Msa0045920:CDS | 25.0% |
| !! | TAGGTTGAATTTATTGGTTA+GGG | - | chr1_1:77910157-77910176 | Msa0045920:CDS | 25.0% |
| !!! | TATTGGTTAGGGTTTTTATA+TGG | - | chr1_1:77910168-77910187 | Msa0045920:intron | 25.0% |
| ! | AACCTTGATTTCTTAAATCT+AGG | + | chr1_1:77910248-77910267 | None:intergenic | 25.0% |
| ! | TCTTGTATTAACTTAAACGA+CGG | - | chr1_1:77910356-77910375 | Msa0045920:CDS | 25.0% |
| ! | ATTGGAAGACTGAAATTTAT+AGG | - | chr1_1:77910430-77910449 | Msa0045920:intron | 25.0% |
| ! | TTGTGATCATATGATGATAA+GGG | + | chr1_1:77910515-77910534 | None:intergenic | 25.0% |
| !!! | GTTTTAAACATTTTGTCACT+AGG | + | chr1_1:77910664-77910683 | None:intergenic | 25.0% |
| ! | ATATTGAGAACAAAGCTAAA+AGG | - | chr1_1:77910850-77910869 | Msa0045920:intron | 25.0% |
| ! | CAGCAATTGCAAATTAAATA+TGG | - | chr1_1:77911030-77911049 | Msa0045920:intron | 25.0% |
| ! | ACAGTCAAAACACTAAAAAA+TGG | - | chr1_1:77911753-77911772 | Msa0045920:CDS | 25.0% |
| !!! | ATTTTGACTTTCTTCAAATG+TGG | - | chr1_1:77911852-77911871 | Msa0045920:intron | 25.0% |
| ! | TTGTGCAGAAAATTAATTGT+AGG | + | chr1_1:77911965-77911984 | None:intergenic | 25.0% |
| ! | GACAAAAAAAAAAAGAGTTG+CGG | - | chr1_1:77912066-77912085 | Msa0045920:intron | 25.0% |
| ! | ACAAAAAAAAAAAGAGTTGC+GGG | - | chr1_1:77912067-77912086 | Msa0045920:intron | 25.0% |
| ! | CAGGTCATAAAATATATTCA+TGG | + | chr1_1:77912308-77912327 | None:intergenic | 25.0% |
| !!! | TACTTTTTAGGAATCAATAG+AGG | - | chr1_1:77912700-77912719 | Msa0045920:intron | 25.0% |
| !!! | ACTTTTTAGGAATCAATAGA+GGG | - | chr1_1:77912701-77912720 | Msa0045920:intron | 25.0% |
| !! | AATCAATAGAGGGTAATTTT+GGG | - | chr1_1:77912711-77912730 | Msa0045920:intron | 25.0% |
| !!! | TTTTTAGGTTTGTGTGATAT+TGG | - | chr1_1:77912781-77912800 | Msa0045920:intron | 25.0% |
| ! | TGAGAAAATATTTCAAGACA+TGG | - | chr1_1:77912897-77912916 | Msa0045920:intron | 25.0% |
| ! | GAGAAAATATTTCAAGACAT+GGG | - | chr1_1:77912898-77912917 | Msa0045920:intron | 25.0% |
| ! | TTTGACTCAACTTTCTAATA+GGG | - | chr1_1:77913111-77913130 | Msa0045920:intron | 25.0% |
| ! | TCAAAATCCAAAATTGGATT+TGG | - | chr1_1:77913151-77913170 | Msa0045920:intron | 25.0% |
| !! | AAAACTAGAGGTAATTTTGT+AGG | + | chr1_1:77913213-77913232 | None:intergenic | 25.0% |
| !!! | GGATTTTAACATAAAACTAG+AGG | + | chr1_1:77913225-77913244 | None:intergenic | 25.0% |
| ! | TGTTGTCACAAATAGAAATA+AGG | + | chr1_1:77913386-77913405 | None:intergenic | 25.0% |
| ! | AAGCATACAATAAGCTATAT+AGG | + | chr1_1:77913430-77913449 | None:intergenic | 25.0% |
| !! | AATTTTTCTCTGAATGCTAA+TGG | - | chr1_1:77913893-77913912 | Msa0045920:intron | 25.0% |
| !! | AATAACATTTTCAGTTTGTG+AGG | + | chr1_1:77914077-77914096 | None:intergenic | 25.0% |
| !!! | GAAAATGTTATTTTGGCAAT+TGG | - | chr1_1:77914085-77914104 | Msa0045920:intron | 25.0% |
| ! | GACAAATTTAGGTGATAAAT+AGG | - | chr1_1:77914556-77914575 | Msa0045920:intron | 25.0% |
| ! | ATGAATATGTTGTCTTCATT+TGG | - | chr1_1:77914707-77914726 | Msa0045920:intron | 25.0% |
| ! | AGTTAAATATCAGAAAACAC+AGG | + | chr1_1:77915057-77915076 | None:intergenic | 25.0% |
| !! | TGTGTTTTCTGATATTTAAC+TGG | - | chr1_1:77915056-77915075 | Msa0045920:intron | 25.0% |
| !!! | TATATATATCCTTTTGGAAC+AGG | - | chr1_1:77915323-77915342 | Msa0045920:intron | 25.0% |
| ! | AGTTGTTAGTAGTTTATTCT+TGG | - | chr1_1:77915516-77915535 | Msa0045920:intron | 25.0% |
| ! | AAATAAAAAAACACATGGAC+TGG | + | chr1_1:77915566-77915585 | None:intergenic | 25.0% |
| !!! | CTGAATTCATCATATTTTAG+AGG | + | chr1_1:77915592-77915611 | None:intergenic | 25.0% |
| !!! | ATACTGATTCAAAGTAATCA+TGG | + | chr1_1:77915667-77915686 | None:intergenic | 25.0% |
| !! | AATTTTAAACCTACTGCAAA+AGG | + | chr1_1:77915744-77915763 | None:intergenic | 25.0% |
| ! | TGACTACATTAAAATTGCTT+AGG | + | chr1_1:77915878-77915897 | None:intergenic | 25.0% |
| ! | TGACTACATTAAAATTGCTT+AGG | + | chr1_1:77915878-77915897 | None:intergenic | 25.0% |
| ! | CAAGTCAACATCAATATTTA+TGG | + | chr1_1:77916106-77916125 | None:intergenic | 25.0% |
| !! | AAAAGATAAAAGCACAAACA+GGG | + | chr1_1:77916211-77916230 | None:intergenic | 25.0% |
| !! | TGTTTGTGCTTTTATCTTTT+GGG | - | chr1_1:77916211-77916230 | Msa0045920:intron | 25.0% |
| ! | GAAATGTAACAATTAAATGG+AGG | - | chr1_1:77916288-77916307 | Msa0045920:intron | 25.0% |
| ! | TGTTGCTGATCTTATATAAA+AGG | - | chr1_1:77916646-77916665 | Msa0045920:intron | 25.0% |
| ! | GTTGCTGATCTTATATAAAA+GGG | - | chr1_1:77916647-77916666 | Msa0045920:intron | 25.0% |
| !! | CTGAGATTAATTTTGTAAAC+TGG | - | chr1_1:77916852-77916871 | Msa0045920:CDS | 25.0% |
| CTAATTGAAACATAACAGAG+AGG | + | chr1_1:77910114-77910133 | None:intergenic | 30.0% | |
| GACCTAGATTTAAGAAATCA+AGG | - | chr1_1:77910243-77910262 | Msa0045920:intron | 30.0% | |
| ! | CTTTGAATAAGGCACTATAT+TGG | - | chr1_1:77910412-77910431 | Msa0045920:intron | 30.0% |
| !!! | TTTTTTACCAACAACGAAAG+AGG | - | chr1_1:77910469-77910488 | Msa0045920:intron | 30.0% |
| GTTGTGATCATATGATGATA+AGG | + | chr1_1:77910516-77910535 | None:intergenic | 30.0% | |
| AAGGATCTTCAAGATATAGA+TGG | + | chr1_1:77910640-77910659 | None:intergenic | 30.0% | |
| GTGAAACCATATACTAAAGT+GGG | + | chr1_1:77910719-77910738 | None:intergenic | 30.0% | |
| ! | AGCTGAAATTTGGTTTACAA+GGG | + | chr1_1:77910797-77910816 | None:intergenic | 30.0% |
| AGTCTCATTATGTTAAGCAT+AGG | + | chr1_1:77911101-77911120 | None:intergenic | 30.0% | |
| TATGGAAAGAAAACTGAAAG+AGG | + | chr1_1:77911162-77911181 | None:intergenic | 30.0% | |
| AGTTTCACATTTAACCTGTT+AGG | + | chr1_1:77911325-77911344 | None:intergenic | 30.0% | |
| ATAATGAGAAACTAAAGGCA+AGG | - | chr1_1:77911392-77911411 | Msa0045920:intron | 30.0% | |
| ! | TATTCATGGTTTTCGTTCAA+TGG | + | chr1_1:77912294-77912313 | None:intergenic | 30.0% |
| TCATGATCAAATTAAGCTTC+AGG | + | chr1_1:77912327-77912346 | None:intergenic | 30.0% | |
| ! | GAAGCTTAATTTGATCATGA+CGG | - | chr1_1:77912327-77912346 | Msa0045920:CDS | 30.0% |
| ACTATAGAATAGATCTCTGA+TGG | + | chr1_1:77912444-77912463 | None:intergenic | 30.0% | |
| ! | GAATCAATAGAGGGTAATTT+TGG | - | chr1_1:77912710-77912729 | Msa0045920:intron | 30.0% |
| !! | TTGGGTTGAATTAACAGATT+AGG | - | chr1_1:77912729-77912748 | Msa0045920:intron | 30.0% |
| ! | TGGGTTGAATTAACAGATTA+GGG | - | chr1_1:77912730-77912749 | Msa0045920:intron | 30.0% |
| AACAAATCATGTGTCTTGAA+GGG | + | chr1_1:77912954-77912973 | None:intergenic | 30.0% | |
| TAACAAATCATGTGTCTTGA+AGG | + | chr1_1:77912955-77912974 | None:intergenic | 30.0% | |
| !! | CAAGACACATGATTTGTTAT+AGG | - | chr1_1:77912956-77912975 | Msa0045920:intron | 30.0% |
| TTCATTAACAAACCACATGT+GGG | + | chr1_1:77912993-77913012 | None:intergenic | 30.0% | |
| ATTCATTAACAAACCACATG+TGG | + | chr1_1:77912994-77913013 | None:intergenic | 30.0% | |
| !! | TATAAAGTGTGTTGTTTGCT+TGG | - | chr1_1:77913037-77913056 | Msa0045920:intron | 30.0% |
| GTTTGACTCAACTTTCTAAT+AGG | - | chr1_1:77913110-77913129 | Msa0045920:intron | 30.0% | |
| TCAACTTTCTAATAGGGAAA+GGG | - | chr1_1:77913117-77913136 | Msa0045920:intron | 30.0% | |
| AGAGGATCAAAATCCAAAAT+TGG | - | chr1_1:77913145-77913164 | Msa0045920:intron | 30.0% | |
| AAATCCAAAATTGGATTTGG+AGG | - | chr1_1:77913154-77913173 | Msa0045920:intron | 30.0% | |
| AATCCAAAATTGGATTTGGA+GGG | - | chr1_1:77913155-77913174 | Msa0045920:intron | 30.0% | |
| ATAGGAGATGTTGTCAAAAA+AGG | + | chr1_1:77913412-77913431 | None:intergenic | 30.0% | |
| ATAAATTGTGACCATTCCAT+TGG | - | chr1_1:77913817-77913836 | Msa0045920:intron | 30.0% | |
| TAAATTGTGACCATTCCATT+GGG | - | chr1_1:77913818-77913837 | Msa0045920:intron | 30.0% | |
| ! | AGGTATACTGTCTATGATTT+TGG | - | chr1_1:77913932-77913951 | Msa0045920:intron | 30.0% |
| !! | GTCAATTAGTTTGCAATTGT+TGG | + | chr1_1:77913974-77913993 | None:intergenic | 30.0% |
| ! | TTTCTTTCTTTTTCTCGTCA+AGG | - | chr1_1:77914301-77914320 | Msa0045920:intron | 30.0% |
| ATAAAATGACAGAGAAGGTA+AGG | + | chr1_1:77914443-77914462 | None:intergenic | 30.0% | |
| !!! | ACCTTCTCTGTCATTTTATT+TGG | - | chr1_1:77914444-77914463 | Msa0045920:intron | 30.0% |
| TCCAAATAAAATGACAGAGA+AGG | + | chr1_1:77914448-77914467 | None:intergenic | 30.0% | |
| !!! | CTCTGTCATTTTATTTGGAA+TGG | - | chr1_1:77914449-77914468 | Msa0045920:intron | 30.0% |
| CTACTTAGCAAAGTTGTAAT+TGG | + | chr1_1:77914501-77914520 | None:intergenic | 30.0% | |
| ACTAAAACCAATCATCAAAC+AGG | + | chr1_1:77914603-77914622 | None:intergenic | 30.0% | |
| AAAATCTGTATCAGCTATAG+AGG | + | chr1_1:77914686-77914705 | None:intergenic | 30.0% | |
| AGGTAAAGTTTCAGATGATT+GGG | + | chr1_1:77914751-77914770 | None:intergenic | 30.0% | |
| CTTAGTTGGATGTATCTTTA+GGG | - | chr1_1:77914781-77914800 | Msa0045920:intron | 30.0% | |
| ! | TTACTCTTGTTGTAAACTTG+TGG | - | chr1_1:77914837-77914856 | Msa0045920:intron | 30.0% |
| ATTCAGAGACTACATAAGTT+TGG | + | chr1_1:77914885-77914904 | None:intergenic | 30.0% | |
| ! | TCAATTCATCACGTTTTACA+AGG | + | chr1_1:77915006-77915025 | None:intergenic | 30.0% |
| AAAACGTGATGAATTGACAT+TGG | - | chr1_1:77915009-77915028 | Msa0045920:intron | 30.0% | |
| ! | ATTTTCATTTACCTTTCGCT+TGG | + | chr1_1:77915224-77915243 | None:intergenic | 30.0% |
| ! | TATAAAGGTTCTTTAGGAAC+AGG | - | chr1_1:77915244-77915263 | Msa0045920:intron | 30.0% |
| AAGAGAAAGAGATGCAATTA+TGG | - | chr1_1:77915416-77915435 | Msa0045920:intron | 30.0% | |
| !! | TATTGATAACGACTGATGTT+TGG | - | chr1_1:77915466-77915485 | Msa0045920:intron | 30.0% |
| !! | ATTGATAACGACTGATGTTT+GGG | - | chr1_1:77915467-77915486 | Msa0045920:intron | 30.0% |
| GGCACAAATAAAAAAACACA+TGG | + | chr1_1:77915571-77915590 | None:intergenic | 30.0% | |
| ATCAAATTCCGTGTAAAACT+GGG | + | chr1_1:77915772-77915791 | None:intergenic | 30.0% | |
| ! | CAAAAGATAAAAGCACAAAC+AGG | + | chr1_1:77916212-77916231 | None:intergenic | 30.0% |
| ! | CTGTTTGTGCTTTTATCTTT+TGG | - | chr1_1:77916210-77916229 | Msa0045920:intron | 30.0% |
| ! | TCTGAAGTAAGTAGTTAGTA+TGG | - | chr1_1:77916475-77916494 | Msa0045920:intron | 30.0% |
| ATAAGATCAGCAACATTCAT+CGG | + | chr1_1:77916641-77916660 | None:intergenic | 30.0% | |
| GTGTTTGTCAAATTTATGCT+AGG | - | chr1_1:77916695-77916714 | Msa0045920:CDS | 30.0% | |
| GTCAAATTTATGCTAGGAAT+TGG | - | chr1_1:77916701-77916720 | Msa0045920:CDS | 30.0% | |
| CTTATGAAACTCTTGACATA+TGG | - | chr1_1:77916763-77916782 | Msa0045920:CDS | 30.0% | |
| !!! | GTTTACTTTTTTTGCCGATA+CGG | - | chr1_1:77916829-77916848 | Msa0045920:CDS | 30.0% |
| AAAATTAATCTCAGCCGTAT+CGG | + | chr1_1:77916846-77916865 | None:intergenic | 30.0% | |
| GACAGTAGAAGAAAGGTTTA+GGG | + | chr1_1:77909796-77909815 | None:intergenic | 35.0% | |
| TGACAGTAGAAGAAAGGTTT+AGG | + | chr1_1:77909797-77909816 | None:intergenic | 35.0% | |
| ATTCAGAGCTTCGATAAGAT+GGG | - | chr1_1:77909875-77909894 | Msa0045920:three_prime_UTR | 35.0% | |
| AAGGTTTCTCAAAACCGTAT+TGG | + | chr1_1:77909931-77909950 | None:intergenic | 35.0% | |
| ! | CGGAAACTTGAGTAAGTTTT+AGG | - | chr1_1:77910138-77910157 | Msa0045920:CDS | 35.0% |
| AACAATACCAAACACGTTTG+TGG | + | chr1_1:77910313-77910332 | None:intergenic | 35.0% | |
| ! | AAACATTTTGTCACTAGGGA+AGG | + | chr1_1:77910659-77910678 | None:intergenic | 35.0% |
| TGGATTCCCACTTTAGTATA+TGG | - | chr1_1:77910710-77910729 | Msa0045920:intron | 35.0% | |
| CGTGAAACCATATACTAAAG+TGG | + | chr1_1:77910720-77910739 | None:intergenic | 35.0% | |
| ! | CAGCTGAAATTTGGTTTACA+AGG | + | chr1_1:77910798-77910817 | None:intergenic | 35.0% |
| GAATTCTGACAGCTGAAATT+TGG | + | chr1_1:77910807-77910826 | None:intergenic | 35.0% | |
| ATGCTTACGTTGGAATATGT+GGG | + | chr1_1:77910962-77910981 | None:intergenic | 35.0% | |
| ! | CAGACTACAGTTTTCAATGA+AGG | - | chr1_1:77911280-77911299 | Msa0045920:CDS | 35.0% |
| !!! | CATTTTTTTGGCATCCTAAC+AGG | - | chr1_1:77911308-77911327 | Msa0045920:CDS | 35.0% |
| ACAGGTTAAATGTGAAACTG+TGG | - | chr1_1:77911326-77911345 | Msa0045920:CDS | 35.0% | |
| ! | AGTTTTGCGGAGAAAATGAA+AGG | - | chr1_1:77911674-77911693 | Msa0045920:intron | 35.0% |
| ! | GTTTTGCGGAGAAAATGAAA+GGG | - | chr1_1:77911675-77911694 | Msa0045920:intron | 35.0% |
| CAAATGTGGAATAGAGACAA+AGG | - | chr1_1:77911866-77911885 | Msa0045920:intron | 35.0% | |
| ! | TAGGCATTAGTCTGAAGATT+GGG | + | chr1_1:77911946-77911965 | None:intergenic | 35.0% |
| AAAAAAAAAGAGTTGCGGGA+AGG | - | chr1_1:77912071-77912090 | Msa0045920:intron | 35.0% | |
| ! | CTTAATTTGATCATGACGGT+TGG | - | chr1_1:77912331-77912350 | Msa0045920:CDS | 35.0% |
| ATGACGGTTGGATTTGAATA+AGG | - | chr1_1:77912343-77912362 | Msa0045920:CDS | 35.0% | |
| !! | TTGTTTTACACGATCTCTGA+TGG | + | chr1_1:77912497-77912516 | None:intergenic | 35.0% |
| TCAGAGATCGTGTAAAACAA+AGG | - | chr1_1:77912497-77912516 | Msa0045920:CDS | 35.0% | |
| ! | AACAGATTAGGGTTTTCCAA+TGG | - | chr1_1:77912741-77912760 | Msa0045920:intron | 35.0% |
| TGACGTGGATTTAAGAAATG+AGG | - | chr1_1:77912805-77912824 | Msa0045920:intron | 35.0% | |
| GACGTGGATTTAAGAAATGA+GGG | - | chr1_1:77912806-77912825 | Msa0045920:intron | 35.0% | |
| CTCAACTTTCTAATAGGGAA+AGG | - | chr1_1:77913116-77913135 | Msa0045920:intron | 35.0% | |
| AAAATTGGATTTGGAGGGAA+GGG | - | chr1_1:77913160-77913179 | Msa0045920:intron | 35.0% | |
| TACAACAACAATGAAGAGAG+GGG | + | chr1_1:77913319-77913338 | None:intergenic | 35.0% | |
| CTACAACAACAATGAAGAGA+GGG | + | chr1_1:77913320-77913339 | None:intergenic | 35.0% | |
| ACTACAACAACAATGAAGAG+AGG | + | chr1_1:77913321-77913340 | None:intergenic | 35.0% | |
| ! | CTCTTCATTGTTGTTGTAGT+TGG | - | chr1_1:77913321-77913340 | Msa0045920:intron | 35.0% |
| ! | AAAGTGCATGTTTTGTACCA+CGG | - | chr1_1:77913530-77913549 | Msa0045920:intron | 35.0% |
| TATATTCACCAGATGAGTGA+GGG | + | chr1_1:77913800-77913819 | None:intergenic | 35.0% | |
| TTATATTCACCAGATGAGTG+AGG | + | chr1_1:77913801-77913820 | None:intergenic | 35.0% | |
| TTGTAATTTGAACAGGTTGC+AGG | - | chr1_1:77914021-77914040 | Msa0045920:intron | 35.0% | |
| TTTAATTGTGTCTCCGACAA+GGG | - | chr1_1:77914045-77914064 | Msa0045920:intron | 35.0% | |
| ! | TTTTGATCATGTCAAGGACT+CGG | + | chr1_1:77914216-77914235 | None:intergenic | 35.0% |
| ! | TTCTCCTTTTGATCATGTCA+AGG | + | chr1_1:77914222-77914241 | None:intergenic | 35.0% |
| TTTGCTAAGTAGACTTCACA+AGG | - | chr1_1:77914509-77914528 | Msa0045920:intron | 35.0% | |
| GGTGATAAATAGGGTTAAAG+AGG | - | chr1_1:77914566-77914585 | Msa0045920:intron | 35.0% | |
| TAACAACATAATTTCCCCTC+AGG | + | chr1_1:77914658-77914677 | None:intergenic | 35.0% | |
| GAGGTAAAGTTTCAGATGAT+TGG | + | chr1_1:77914752-77914771 | None:intergenic | 35.0% | |
| ! | TACGCTACCTCATGAAATTT+TGG | - | chr1_1:77914943-77914962 | Msa0045920:intron | 35.0% |
| GTCATCTCCAAAATTTCATG+AGG | + | chr1_1:77914953-77914972 | None:intergenic | 35.0% | |
| TTATGTTGATGTTGAAAGGG+AGG | - | chr1_1:77915126-77915145 | Msa0045920:intron | 35.0% | |
| GAATATAACAGCTTGAGTGA+TGG | + | chr1_1:77915194-77915213 | None:intergenic | 35.0% | |
| !!! | ATATATCCTTTTGGAACAGG+TGG | - | chr1_1:77915326-77915345 | Msa0045920:intron | 35.0% |
| TTCACTATCTCATCAATGCA+CGG | - | chr1_1:77915381-77915400 | Msa0045920:intron | 35.0% | |
| ATTGCATCTCTTTCTCTTTG+AGG | + | chr1_1:77915414-77915433 | None:intergenic | 35.0% | |
| ATTATGGATGAATTTCGTGC+TGG | - | chr1_1:77915432-77915451 | Msa0045920:intron | 35.0% | |
| !!! | AAAAACTAGCCTTTTGCAGT+AGG | - | chr1_1:77915732-77915751 | Msa0045920:intron | 35.0% |
| GATCAAATTCCGTGTAAAAC+TGG | + | chr1_1:77915773-77915792 | None:intergenic | 35.0% | |
| ! | GTCAGCAATTACTGTGTTTT+GGG | + | chr1_1:77916007-77916026 | None:intergenic | 35.0% |
| ATATCTTCCTACTTCTGTTC+AGG | + | chr1_1:77916029-77916048 | None:intergenic | 35.0% | |
| !! | TGTGCTTTTATCTTTTGGGT+CGG | - | chr1_1:77916215-77916234 | Msa0045920:intron | 35.0% |
| TGATAACAGAAACAAGTGCA+CGG | + | chr1_1:77916333-77916352 | None:intergenic | 35.0% | |
| ATGTACAGCTCTCGATTATT+TGG | + | chr1_1:77916384-77916403 | None:intergenic | 35.0% | |
| AAAAGTAAACCTTCATCCCT+GGG | + | chr1_1:77916819-77916838 | None:intergenic | 35.0% | |
| AAAAAGTAAACCTTCATCCC+TGG | + | chr1_1:77916820-77916839 | None:intergenic | 35.0% | |
| TGTCCATTATCTTACATGCA+AGG | - | chr1_1:77916888-77916907 | Msa0045920:exon | 35.0% | |
| TTTCTTCTACTGTCACTCAG+CGG | - | chr1_1:77909802-77909821 | Msa0045920:three_prime_UTR | 40.0% | |
| GATTCAGAGCTTCGATAAGA+TGG | - | chr1_1:77909874-77909893 | Msa0045920:three_prime_UTR | 40.0% | |
| ATCAAAGACGATTTACTGCG+TGG | - | chr1_1:77909899-77909918 | Msa0045920:three_prime_UTR | 40.0% | |
| CTGCGTGGAATTTACCAATA+CGG | - | chr1_1:77909914-77909933 | Msa0045920:three_prime_UTR | 40.0% | |
| ACCCTGAATGATAGGTAGAA+CGG | + | chr1_1:77909972-77909991 | None:intergenic | 40.0% | |
| AAGAGGAACTCACTCTTTGA+CGG | + | chr1_1:77910077-77910096 | None:intergenic | 40.0% | |
| AGGAGAGAGAAGATGAAAAG+AGG | + | chr1_1:77910094-77910113 | None:intergenic | 40.0% | |
| ! | GCTTTATGTTTCTGTGACAC+TGG | - | chr1_1:77910218-77910237 | Msa0045920:intron | 40.0% |
| ACCAACAACGAAAGAGGTTA+AGG | - | chr1_1:77910475-77910494 | Msa0045920:intron | 40.0% | |
| TCCTTAACCTCTTTCGTTGT+TGG | + | chr1_1:77910479-77910498 | None:intergenic | 40.0% | |
| ! | ATGTTGTGCGTGATGGAAAT+TGG | + | chr1_1:77910691-77910710 | None:intergenic | 40.0% |
| AATTTCCATCACGCACAACA+TGG | - | chr1_1:77910690-77910709 | Msa0045920:intron | 40.0% | |
| GATGCTTACGTTGGAATATG+TGG | + | chr1_1:77910963-77910982 | None:intergenic | 40.0% | |
| CAAATGACTGATGCTTACGT+TGG | + | chr1_1:77910972-77910991 | None:intergenic | 40.0% | |
| CAACGTAAGCATCAGTCATT+TGG | - | chr1_1:77910970-77910989 | Msa0045920:intron | 40.0% | |
| TTTGTGCAAAGTCATGAAGC+AGG | - | chr1_1:77911612-77911631 | Msa0045920:intron | 40.0% | |
| !! | GTGTCATTGACACTTTTGTG+TGG | + | chr1_1:77911807-77911826 | None:intergenic | 40.0% |
| AAGATTGGGAAGACAACTTC+TGG | + | chr1_1:77911932-77911951 | None:intergenic | 40.0% | |
| ! | GTAGGCATTAGTCTGAAGAT+TGG | + | chr1_1:77911947-77911966 | None:intergenic | 40.0% |
| !!! | GGTCTCTGTCATTTTGTTGA+AGG | - | chr1_1:77912518-77912537 | Msa0045920:CDS | 40.0% |
| ! | GATTAGGGTTTTCCAATGGT+TGG | - | chr1_1:77912745-77912764 | Msa0045920:intron | 40.0% |
| ! | CAATGGTTGGAGTTGTTTCA+GGG | - | chr1_1:77912758-77912777 | Msa0045920:intron | 40.0% |
| !! | GGAGTTGTTTCAGGGTTTTT+AGG | - | chr1_1:77912766-77912785 | Msa0045920:intron | 40.0% |
| TTGTGTGATATTGGATGACG+TGG | - | chr1_1:77912790-77912809 | Msa0045920:intron | 40.0% | |
| GTGCATATAATACCCACATG+TGG | - | chr1_1:77912978-77912997 | Msa0045920:intron | 40.0% | |
| ! | TGTTGTTTGCTTGGTCTGTT+TGG | - | chr1_1:77913046-77913065 | Msa0045920:intron | 40.0% |
| ACTTTCTAATAGGGAAAGGG+AGG | - | chr1_1:77913120-77913139 | Msa0045920:intron | 40.0% | |
| CTTTCTAATAGGGAAAGGGA+GGG | - | chr1_1:77913121-77913140 | Msa0045920:intron | 40.0% | |
| ! | CTTCCCTCCAAATCCAATTT+TGG | + | chr1_1:77913161-77913180 | None:intergenic | 40.0% |
| CAAAATTGGATTTGGAGGGA+AGG | - | chr1_1:77913159-77913178 | Msa0045920:intron | 40.0% | |
| GAGACGCACGAGTTAAATAT+TGG | + | chr1_1:77913246-77913265 | None:intergenic | 40.0% | |
| ! | TAGTTGGCACTTTGACTTCT+CGG | - | chr1_1:77913337-77913356 | Msa0045920:intron | 40.0% |
| AGTTCAACATGCCCAAATCA+AGG | + | chr1_1:77913618-77913637 | None:intergenic | 40.0% | |
| GATTTGGGCATGTTGAACTA+TGG | - | chr1_1:77913619-77913638 | Msa0045920:intron | 40.0% | |
| TATTTGAGAATGCCCTGTGA+TGG | - | chr1_1:77913736-77913755 | Msa0045920:intron | 40.0% | |
| AGTATACCTGTCATGGTCAT+AGG | + | chr1_1:77913921-77913940 | None:intergenic | 40.0% | |
| CATAGACAGTATACCTGTCA+TGG | + | chr1_1:77913928-77913947 | None:intergenic | 40.0% | |
| CTTTAATTGTGTCTCCGACA+AGG | - | chr1_1:77914044-77914063 | Msa0045920:intron | 40.0% | |
| GACACAAGGAAACTTGAACA+CGG | - | chr1_1:77914163-77914182 | Msa0045920:intron | 40.0% | |
| GAGTCCTTGACATGATCAAA+AGG | - | chr1_1:77914215-77914234 | Msa0045920:intron | 40.0% | |
| TGTGTATAGATATCTCCCTC+CGG | - | chr1_1:77914404-77914423 | Msa0045920:intron | 40.0% | |
| ! | TGATGTGCCTGTTTGATGAT+TGG | - | chr1_1:77914593-77914612 | Msa0045920:intron | 40.0% |
| CTCATTTCCACTCCTTCATA+TGG | + | chr1_1:77914635-77914654 | None:intergenic | 40.0% | |
| AGTTTGGAAAGAATGCAGAC+AGG | + | chr1_1:77914869-77914888 | None:intergenic | 40.0% | |
| AGTTTATGACAGATCCTGTG+AGG | - | chr1_1:77914978-77914997 | Msa0045920:intron | 40.0% | |
| ACGTGATGAATTGACATTGG+AGG | - | chr1_1:77915012-77915031 | Msa0045920:intron | 40.0% | |
| TTGATGTTGAAAGGGAGGAA+TGG | - | chr1_1:77915131-77915150 | Msa0045920:intron | 40.0% | |
| ATTCTGTAACACCAAGCGAA+AGG | - | chr1_1:77915210-77915229 | Msa0045920:intron | 40.0% | |
| ! | ATTTCACGCCCAGTTTTACA+CGG | - | chr1_1:77915761-77915780 | Msa0045920:intron | 40.0% |
| ! | AAGCTTTATCCCACTAAGTG+GGG | + | chr1_1:77915807-77915826 | None:intergenic | 40.0% |
| ! | CAAGCTTTATCCCACTAAGT+GGG | + | chr1_1:77915808-77915827 | None:intergenic | 40.0% |
| ! | GGTCAGCAATTACTGTGTTT+TGG | + | chr1_1:77916008-77916027 | None:intergenic | 40.0% |
| ATGTGCTCAAGCATTCCAAT+TGG | - | chr1_1:77916126-77916145 | Msa0045920:intron | 40.0% | |
| TGTGCTCAAGCATTCCAATT+GGG | - | chr1_1:77916127-77916146 | Msa0045920:intron | 40.0% | |
| !! | GTGCTTTTATCTTTTGGGTC+GGG | - | chr1_1:77916216-77916235 | Msa0045920:intron | 40.0% |
| !! | TGCTTTTATCTTTTGGGTCG+GGG | - | chr1_1:77916217-77916236 | Msa0045920:intron | 40.0% |
| !! | GTGCACTTGTTTCTGTTATC+AGG | - | chr1_1:77916332-77916351 | Msa0045920:intron | 40.0% |
| ATCGAGAGCTGTACATTCAT+CGG | - | chr1_1:77916388-77916407 | Msa0045920:intron | 40.0% | |
| !! | ACGTTTTGGACGAAAGGTAT+TGG | - | chr1_1:77916425-77916444 | Msa0045920:intron | 40.0% |
| !!! | CGTTTTGGACGAAAGGTATT+GGG | - | chr1_1:77916426-77916445 | Msa0045920:intron | 40.0% |
| CTTATAGTTGGGCCTAATCA+TGG | - | chr1_1:77916521-77916540 | Msa0045920:intron | 40.0% | |
| AAGGGCAATGCAGTATATGT+TGG | - | chr1_1:77916665-77916684 | Msa0045920:CDS | 40.0% | |
| CCACCTTGCATGTAAGATAA+TGG | + | chr1_1:77916894-77916913 | None:intergenic | 40.0% | |
| CCATTATCTTACATGCAAGG+TGG | - | chr1_1:77916891-77916910 | Msa0045920:exon | 40.0% | |
| GCTGAGTGACAGTAGAAGAA+AGG | + | chr1_1:77909803-77909822 | None:intergenic | 45.0% | |
| TCAAAGCTTCGAGACATCGA+AGG | - | chr1_1:77909841-77909860 | Msa0045920:three_prime_UTR | 45.0% | |
| CAAAGCTTCGAGACATCGAA+GGG | - | chr1_1:77909842-77909861 | Msa0045920:three_prime_UTR | 45.0% | |
| TGCCGTTCTACCTATCATTC+AGG | - | chr1_1:77909967-77909986 | Msa0045920:three_prime_UTR | 45.0% | |
| GCCGTTCTACCTATCATTCA+GGG | - | chr1_1:77909968-77909987 | Msa0045920:three_prime_UTR | 45.0% | |
| AACAGTGAGAGCAATCATGG+AGG | + | chr1_1:77910035-77910054 | None:intergenic | 45.0% | |
| GCAAACAGTGAGAGCAATCA+TGG | + | chr1_1:77910038-77910057 | None:intergenic | 45.0% | |
| TACCAAACACGTTTGTGGAG+TGG | + | chr1_1:77910308-77910327 | None:intergenic | 45.0% | |
| ! | ACGACGGCTATGTTTGTTGA+CGG | - | chr1_1:77910372-77910391 | Msa0045920:intron | 45.0% |
| TTACGTTGGAATATGTGGGC+AGG | + | chr1_1:77910958-77910977 | None:intergenic | 45.0% | |
| CCACTTACTCGGAAAGATGA+CGG | + | chr1_1:77911543-77911562 | None:intergenic | 45.0% | |
| TGGGAAGACAACTTCTGGTA+TGG | + | chr1_1:77911927-77911946 | None:intergenic | 45.0% | |
| CAGCAGAGGAGAGAAGAAAA+AGG | - | chr1_1:77912165-77912184 | Msa0045920:intron | 45.0% | |
| TCGGCATTGTGACAGATCAA+TGG | + | chr1_1:77912622-77912641 | None:intergenic | 45.0% | |
| GTTTGCGGTGATACAAGACT+CGG | + | chr1_1:77912641-77912660 | None:intergenic | 45.0% | |
| ACTCCACAAATGCGTGTTTG+CGG | + | chr1_1:77912656-77912675 | None:intergenic | 45.0% | |
| CCTGAAACAACTCCAACCAT+TGG | + | chr1_1:77912760-77912779 | None:intergenic | 45.0% | |
| ! | CCAATGGTTGGAGTTGTTTC+AGG | - | chr1_1:77912757-77912776 | Msa0045920:intron | 45.0% |
| GTTTGCTTGGTCTGTTTGGT+TGG | - | chr1_1:77913050-77913069 | Msa0045920:intron | 45.0% | |
| TGATTTCTGCAAAACCACCG+TGG | + | chr1_1:77913550-77913569 | None:intergenic | 45.0% | |
| !! | CGGTGGTTTTGCAGAAATCA+TGG | - | chr1_1:77913550-77913569 | Msa0045920:intron | 45.0% |
| ATGTTGCCAAAGCGGTCTTA+TGG | - | chr1_1:77913585-77913604 | Msa0045920:intron | 45.0% | |
| TATGGTGGCTCACCTTGATT+TGG | - | chr1_1:77913603-77913622 | Msa0045920:intron | 45.0% | |
| ATGGTGGCTCACCTTGATTT+GGG | - | chr1_1:77913604-77913623 | Msa0045920:intron | 45.0% | |
| GTTCTTCTGACCCAATGGAA+TGG | + | chr1_1:77913831-77913850 | None:intergenic | 45.0% | |
| GATAGGTTCTTCTGACCCAA+TGG | + | chr1_1:77913836-77913855 | None:intergenic | 45.0% | |
| ATACGAGCACATGCATGCAT+TGG | - | chr1_1:77914121-77914140 | Msa0045920:intron | 45.0% | |
| !! | AAAGCGTTGGAGAAGACACA+AGG | - | chr1_1:77914149-77914168 | Msa0045920:intron | 45.0% |
| ACACGGAGTTCATGTAGTGT+CGG | - | chr1_1:77914180-77914199 | Msa0045920:intron | 45.0% | |
| ! | AGCTATCAAGTTGCTTGTGC+TGG | - | chr1_1:77914255-77914274 | Msa0045920:intron | 45.0% |
| TCTGATGAAATGCTGAGCAG+AGG | - | chr1_1:77914360-77914379 | Msa0045920:intron | 45.0% | |
| GTAAGGTGAACCTGAAGATC+CGG | + | chr1_1:77914426-77914445 | None:intergenic | 45.0% | |
| AGTGACCTGACACCATATGA+AGG | - | chr1_1:77914620-77914639 | Msa0045920:intron | 45.0% | |
| ! | CGTTTTACAAGGATCCTCAC+AGG | + | chr1_1:77914995-77915014 | None:intergenic | 45.0% |
| ATTACCCGCCTCATGATTAC+AGG | - | chr1_1:77915090-77915109 | Msa0045920:intron | 45.0% | |
| TTACCCGCCTCATGATTACA+GGG | - | chr1_1:77915091-77915110 | Msa0045920:intron | 45.0% | |
| GGTCACTGGTCAAACAAGTT+AGG | + | chr1_1:77915545-77915564 | None:intergenic | 45.0% | |
| !! | AAAACACATGGACTGGTCAC+TGG | + | chr1_1:77915559-77915578 | None:intergenic | 45.0% |
| TTTATCCCACTAAGTGGGGT+CGG | + | chr1_1:77915803-77915822 | None:intergenic | 45.0% | |
| ! | CCAAGCTTTATCCCACTAAG+TGG | + | chr1_1:77915809-77915828 | None:intergenic | 45.0% |
| CCACTTAGTGGGATAAAGCT+TGG | - | chr1_1:77915806-77915825 | Msa0045920:intron | 45.0% | |
| GTGGGATAAAGCTTGGTTGT+TGG | - | chr1_1:77915813-77915832 | Msa0045920:intron | 45.0% | |
| TTGCTGACCTGAACAGAAGT+AGG | - | chr1_1:77916019-77916038 | Msa0045920:intron | 45.0% | |
| GAGCTGTACATTCATCGGAT+TGG | - | chr1_1:77916393-77916412 | Msa0045920:intron | 45.0% | |
| TTCGTCCAAAACGTCCAGAA+CGG | + | chr1_1:77916419-77916438 | None:intergenic | 45.0% | |
| !! | TTCTGGACGTTTTGGACGAA+AGG | - | chr1_1:77916419-77916438 | Msa0045920:intron | 45.0% |
| ACACCCTGCAAACCATGATT+AGG | + | chr1_1:77916536-77916555 | None:intergenic | 45.0% | |
| !!! | ATTATTATATATTTTTACTA+TGG | + | chr1_1:77911708-77911727 | None:intergenic | 5.0% |
| GCACGCTGTTGAATGGATGA+AGG | + | chr1_1:77909950-77909969 | None:intergenic | 50.0% | |
| TAGAACGGCACGCTGTTGAA+TGG | + | chr1_1:77909957-77909976 | None:intergenic | 50.0% | |
| ACGTCACGACCCTGAATGAT+AGG | + | chr1_1:77909980-77909999 | None:intergenic | 50.0% | |
| GTCATCGCTCAGTCTCAATC+TGG | - | chr1_1:77909998-77910017 | Msa0045920:three_prime_UTR | 50.0% | |
| ! | GCTCAGTCTCAATCTGGAAC+CGG | - | chr1_1:77910004-77910023 | Msa0045920:three_prime_UTR | 50.0% |
| AGCAATCATGGAGGACTTGC+CGG | + | chr1_1:77910026-77910045 | None:intergenic | 50.0% | |
| GATTGCTCTCACTGTTTGCC+AGG | - | chr1_1:77910039-77910058 | Msa0045920:three_prime_UTR | 50.0% | |
| !! | TGACGGAGGTATCAACAACC+TGG | + | chr1_1:77910060-77910079 | None:intergenic | 50.0% |
| AGGAACTCACTCTTTGACGG+AGG | + | chr1_1:77910074-77910093 | None:intergenic | 50.0% | |
| CTCCACTCCACAAACGTGTT+TGG | - | chr1_1:77910303-77910322 | Msa0045920:CDS | 50.0% | |
| ! | CGACGGCTATGTTTGTTGAC+GGG | - | chr1_1:77910373-77910392 | Msa0045920:intron | 50.0% |
| GGAATCCATGTTGTGCGTGA+TGG | + | chr1_1:77910698-77910717 | None:intergenic | 50.0% | |
| GTTGGAATATGTGGGCAGGA+AGG | + | chr1_1:77910954-77910973 | None:intergenic | 50.0% | |
| CCGTCATCTTTCCGAGTAAG+TGG | - | chr1_1:77911540-77911559 | Msa0045920:CDS | 50.0% | |
| TGTCTCTGCTGAACTGACAG+AGG | + | chr1_1:77912141-77912160 | None:intergenic | 50.0% | |
| AGCAGAGACAACTTCAGCAG+AGG | - | chr1_1:77912151-77912170 | Msa0045920:intron | 50.0% | |
| TCACCGCAAACACGCATTTG+TGG | - | chr1_1:77912650-77912669 | Msa0045920:CDS | 50.0% | |
| TGCTTGGTCTGTTTGGTTGG+AGG | - | chr1_1:77913053-77913072 | Msa0045920:intron | 50.0% | |
| TGGTCTGTTTGGTTGGAGGT+AGG | - | chr1_1:77913057-77913076 | Msa0045920:intron | 50.0% | |
| TCTGTTTGGTTGGAGGTAGG+TGG | - | chr1_1:77913060-77913079 | Msa0045920:intron | 50.0% | |
| TTTGGTTGGAGGTAGGTGGA+GGG | - | chr1_1:77913064-77913083 | Msa0045920:intron | 50.0% | |
| AATAGGGAAAGGGAGGGAAG+AGG | - | chr1_1:77913127-77913146 | Msa0045920:intron | 50.0% | |
| ! | GTGCATGTTTTGTACCACGG+TGG | - | chr1_1:77913533-77913552 | Msa0045920:intron | 50.0% |
| CCACCATGATGTTGCCAAAG+CGG | - | chr1_1:77913577-77913596 | Msa0045920:intron | 50.0% | |
| AGACCGCTTTGGCAACATCA+TGG | + | chr1_1:77913583-77913602 | None:intergenic | 50.0% | |
| ! | TTGCCAAAGCGGTCTTATGG+TGG | - | chr1_1:77913588-77913607 | Msa0045920:intron | 50.0% |
| AATGCCCTGTGATGGTCAGT+TGG | - | chr1_1:77913744-77913763 | Msa0045920:intron | 50.0% | |
| ATGCCCTGTGATGGTCAGTT+GGG | - | chr1_1:77913745-77913764 | Msa0045920:intron | 50.0% | |
| ! | GGTCAGTTGGGCTGTTCTTT+TGG | - | chr1_1:77913757-77913776 | Msa0045920:intron | 50.0% |
| !!! | CTTTTGGTTAGCCTGCTCAG+AGG | - | chr1_1:77913773-77913792 | Msa0045920:intron | 50.0% |
| ATGGAGCCTATGACCATGAC+AGG | - | chr1_1:77913912-77913931 | Msa0045920:intron | 50.0% | |
| TGTGTCTCCGACAAGGGAAT+TGG | - | chr1_1:77914051-77914070 | Msa0045920:intron | 50.0% | |
| TGTGAGGCCAATTCCCTTGT+CGG | + | chr1_1:77914061-77914080 | None:intergenic | 50.0% | |
| ! | TGCATTGGAGGCAAAAGCGT+TGG | - | chr1_1:77914136-77914155 | Msa0045920:intron | 50.0% |
| CACGGAGTTCATGTAGTGTC+GGG | - | chr1_1:77914181-77914200 | Msa0045920:intron | 50.0% | |
| ACGGAGTTCATGTAGTGTCG+GGG | - | chr1_1:77914182-77914201 | Msa0045920:intron | 50.0% | |
| ATATCTCCCTCCGGATCTTC+AGG | - | chr1_1:77914413-77914432 | Msa0045920:intron | 50.0% | |
| CCACTCCTTCATATGGTGTC+AGG | + | chr1_1:77914628-77914647 | None:intergenic | 50.0% | |
| CCTGACACCATATGAAGGAG+TGG | - | chr1_1:77914625-77914644 | Msa0045920:intron | 50.0% | |
| AAGGAGTGGAAATGAGCCTG+AGG | - | chr1_1:77914639-77914658 | Msa0045920:intron | 50.0% | |
| AGGAGTGGAAATGAGCCTGA+GGG | - | chr1_1:77914640-77914659 | Msa0045920:intron | 50.0% | |
| !! | GGATGTATCTTTAGGGTCCG+TGG | - | chr1_1:77914788-77914807 | Msa0045920:intron | 50.0% |
| CGCACATCACTCCAGTAACT+GGG | + | chr1_1:77914815-77914834 | None:intergenic | 50.0% | |
| ACGCACATCACTCCAGTAAC+TGG | + | chr1_1:77914816-77914835 | None:intergenic | 50.0% | |
| ATGCCCTGTAATCATGAGGC+GGG | + | chr1_1:77915097-77915116 | None:intergenic | 50.0% | |
| GATGCCCTGTAATCATGAGG+CGG | + | chr1_1:77915098-77915117 | None:intergenic | 50.0% | |
| CCTGATGCCCTGTAATCATG+AGG | + | chr1_1:77915101-77915120 | None:intergenic | 50.0% | |
| ! | CCTCATGATTACAGGGCATC+AGG | - | chr1_1:77915098-77915117 | Msa0045920:intron | 50.0% |
| !!! | TCCTTTTGGAACAGGTGGAC+TGG | - | chr1_1:77915331-77915350 | Msa0045920:intron | 50.0% |
| ACCAGTCCACCTGTTCCAAA+AGG | + | chr1_1:77915335-77915354 | None:intergenic | 50.0% | |
| TCGTGGACTTGATGTACAGC+AGG | - | chr1_1:77915491-77915510 | Msa0045920:intron | 50.0% | |
| ACTAAGTGGGGTCGGTTACA+TGG | + | chr1_1:77915795-77915814 | None:intergenic | 50.0% | |
| ATGTAACCGACCCCACTTAG+TGG | - | chr1_1:77915794-77915813 | Msa0045920:intron | 50.0% | |
| TGTAACCGACCCCACTTAGT+GGG | - | chr1_1:77915795-77915814 | Msa0045920:intron | 50.0% | |
| AGCACAAGTGCATGCCCAAT+TGG | + | chr1_1:77916144-77916163 | None:intergenic | 50.0% | |
| !! | TATCTTTTGGGTCGGGGTGA+AGG | - | chr1_1:77916223-77916242 | Msa0045920:intron | 50.0% |
| !! | ATTCATCGGATTGGCCGTTC+TGG | - | chr1_1:77916402-77916421 | Msa0045920:intron | 50.0% |
| !! | ATTGGCCGTTCTGGACGTTT+TGG | - | chr1_1:77916411-77916430 | Msa0045920:intron | 50.0% |
| ! | TGGGCCTAATCATGGTTTGC+AGG | - | chr1_1:77916529-77916548 | Msa0045920:intron | 50.0% |
| ! | GGGCCTAATCATGGTTTGCA+GGG | - | chr1_1:77916530-77916549 | Msa0045920:intron | 50.0% |
| TTGTTTGCTCGACTGAACCC+AGG | - | chr1_1:77916799-77916818 | Msa0045920:CDS | 50.0% | |
| TGTTTGCTCGACTGAACCCA+GGG | - | chr1_1:77916800-77916819 | Msa0045920:CDS | 50.0% | |
| CTACTGTCACTCAGCGGCTA+TGG | - | chr1_1:77909808-77909827 | Msa0045920:three_prime_UTR | 55.0% | |
| TCACTCAGCGGCTATGGCTA+TGG | - | chr1_1:77909814-77909833 | Msa0045920:three_prime_UTR | 55.0% | |
| CTCCTCCAAGAGTGAGTGAG+TGG | - | chr1_1:77912865-77912884 | Msa0045920:intron | 55.0% | |
| CTCCACTCACTCACTCTTGG+AGG | + | chr1_1:77912870-77912889 | None:intergenic | 55.0% | |
| GCTCTCCACTCACTCACTCT+TGG | + | chr1_1:77912873-77912892 | None:intergenic | 55.0% | |
| GTTTGGTTGGAGGTAGGTGG+AGG | - | chr1_1:77913063-77913082 | Msa0045920:intron | 55.0% | |
| TTGGTTGGAGGTAGGTGGAG+GGG | - | chr1_1:77913065-77913084 | Msa0045920:intron | 55.0% | |
| CCGCTTTGGCAACATCATGG+TGG | + | chr1_1:77913580-77913599 | None:intergenic | 55.0% | |
| GAGCCACCATAAGACCGCTT+TGG | + | chr1_1:77913594-77913613 | None:intergenic | 55.0% | |
| CAGCCCAACTGACCATCACA+GGG | + | chr1_1:77913751-77913770 | None:intergenic | 55.0% | |
| ACAGCCCAACTGACCATCAC+AGG | + | chr1_1:77913752-77913771 | None:intergenic | 55.0% | |
| TCAGAGGTCCCTCACTCATC+TGG | - | chr1_1:77913789-77913808 | Msa0045920:intron | 55.0% | |
| CGAGCACATGCATGCATTGG+AGG | - | chr1_1:77914124-77914143 | Msa0045920:intron | 55.0% | |
| ATCATGTCAAGGACTCGGCC+AGG | + | chr1_1:77914211-77914230 | None:intergenic | 55.0% | |
| GGTGAACCTGAAGATCCGGA+GGG | + | chr1_1:77914422-77914441 | None:intergenic | 55.0% | |
| AGGTGAACCTGAAGATCCGG+AGG | + | chr1_1:77914423-77914442 | None:intergenic | 55.0% | |
| GGAGTGGAAATGAGCCTGAG+GGG | - | chr1_1:77914641-77914660 | Msa0045920:intron | 55.0% | |
| CACTCCAGTAACTGGGACCA+CGG | + | chr1_1:77914808-77914827 | None:intergenic | 55.0% | |
| ACGACTGATGTTTGGGCTCG+TGG | - | chr1_1:77915474-77915493 | Msa0045920:intron | 55.0% | |
| TCGACTGAACCCAGGGATGA+AGG | - | chr1_1:77916807-77916826 | Msa0045920:CDS | 55.0% | |
| TTGGAGGTAGGTGGAGGGGA+GGG | - | chr1_1:77913069-77913088 | Msa0045920:intron | 60.0% | |
| TGAGTGAGGGACCTCTGAGC+AGG | + | chr1_1:77913787-77913806 | None:intergenic | 60.0% | |
| ! | CATGTAGTGTCGGGGACTCC+TGG | - | chr1_1:77914190-77914209 | Msa0045920:intron | 60.0% |
| GTTGGAGGTAGGTGGAGGGG+AGG | - | chr1_1:77913068-77913087 | Msa0045920:intron | 65.0% | |
| GGGTCCGTGGTCCCAGTTAC+TGG | - | chr1_1:77914801-77914820 | Msa0045920:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 77909781 | 77916952 | 77909781 | ID=Msa0045920;Name=Msa0045920 |
| chr1_1 | mRNA | 77909781 | 77916952 | 77909781 | ID=Msa0045920-mRNA-1;Parent=Msa0045920;Name=Msa0045920-mRNA-1;_AED=0.20;_eAED=0.20;_QI=46|0.85|0.87|1|1|1|8|288|388 |
| chr1_1 | exon | 77909781 | 77910182 | 77909781 | ID=Msa0045920-mRNA-1:exon:26730;Parent=Msa0045920-mRNA-1 |
| chr1_1 | exon | 77910293 | 77910379 | 77910293 | ID=Msa0045920-mRNA-1:exon:26729;Parent=Msa0045920-mRNA-1 |
| chr1_1 | exon | 77911230 | 77911388 | 77911230 | ID=Msa0045920-mRNA-1:exon:26728;Parent=Msa0045920-mRNA-1 |
| chr1_1 | exon | 77911502 | 77911621 | 77911502 | ID=Msa0045920-mRNA-1:exon:26727;Parent=Msa0045920-mRNA-1 |
| chr1_1 | exon | 77911700 | 77911807 | 77911700 | ID=Msa0045920-mRNA-1:exon:26726;Parent=Msa0045920-mRNA-1 |
| chr1_1 | exon | 77912299 | 77912379 | 77912299 | ID=Msa0045920-mRNA-1:exon:26725;Parent=Msa0045920-mRNA-1 |
| chr1_1 | exon | 77912457 | 77912697 | 77912457 | ID=Msa0045920-mRNA-1:exon:26724;Parent=Msa0045920-mRNA-1 |
| chr1_1 | exon | 77916650 | 77916952 | 77916650 | ID=Msa0045920-mRNA-1:exon:26723;Parent=Msa0045920-mRNA-1 |
| chr1_1 | five_prime_UTR | 77916907 | 77916952 | 77916907 | ID=Msa0045920-mRNA-1:five_prime_utr;Parent=Msa0045920-mRNA-1 |
| chr1_1 | CDS | 77916650 | 77916906 | 77916650 | ID=Msa0045920-mRNA-1:cds;Parent=Msa0045920-mRNA-1 |
| chr1_1 | CDS | 77912457 | 77912697 | 77912457 | ID=Msa0045920-mRNA-1:cds;Parent=Msa0045920-mRNA-1 |
| chr1_1 | CDS | 77912299 | 77912379 | 77912299 | ID=Msa0045920-mRNA-1:cds;Parent=Msa0045920-mRNA-1 |
| chr1_1 | CDS | 77911700 | 77911807 | 77911700 | ID=Msa0045920-mRNA-1:cds;Parent=Msa0045920-mRNA-1 |
| chr1_1 | CDS | 77911502 | 77911621 | 77911502 | ID=Msa0045920-mRNA-1:cds;Parent=Msa0045920-mRNA-1 |
| chr1_1 | CDS | 77911230 | 77911388 | 77911230 | ID=Msa0045920-mRNA-1:cds;Parent=Msa0045920-mRNA-1 |
| chr1_1 | CDS | 77910293 | 77910379 | 77910293 | ID=Msa0045920-mRNA-1:cds;Parent=Msa0045920-mRNA-1 |
| chr1_1 | CDS | 77910069 | 77910182 | 77910069 | ID=Msa0045920-mRNA-1:cds;Parent=Msa0045920-mRNA-1 |
| chr1_1 | three_prime_UTR | 77909781 | 77910068 | 77909781 | ID=Msa0045920-mRNA-1:three_prime_utr;Parent=Msa0045920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
