Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388280 | XP_003592571.2 | 95.047 | 424 | 13 | 2 | 1 | 420 | 1 | 420 | 0.0 | 809 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388280 | sp|Q5BK48|TTC5_RAT | 35.071 | 422 | 239 | 11 | 10 | 402 | 6 | 421 | 4.48e-63 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388280 | G7IAV1 | 95.047 | 424 | 13 | 2 | 1 | 420 | 1 | 420 | 0.0 | 809 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0388280 | 0.819071 | 1.407964e-52 | -8.615850e-47 |
| Msa0006040 | Msa0388280 | 0.803287 | 3.746891e-49 | -8.615850e-47 |
| Msa0007440 | Msa0388280 | 0.824880 | 6.350471e-54 | -8.615850e-47 |
| Msa0011170 | Msa0388280 | 0.817526 | 3.151221e-52 | -8.615850e-47 |
| Msa0011960 | Msa0388280 | 0.803344 | 3.645585e-49 | -8.615850e-47 |
| Msa0014710 | Msa0388280 | 0.814130 | 1.801726e-51 | -8.615850e-47 |
| Msa0036140 | Msa0388280 | 0.813637 | 2.314313e-51 | -8.615850e-47 |
| Msa0042920 | Msa0388280 | 0.861069 | 1.329204e-63 | -8.615850e-47 |
| Msa0043980 | Msa0388280 | 0.817877 | 2.624718e-52 | -8.615850e-47 |
| Msa0044260 | Msa0388280 | 0.815982 | 6.992836e-52 | -8.615850e-47 |
| Msa0044330 | Msa0388280 | 0.841742 | 3.951842e-58 | -8.615850e-47 |
| Msa0045920 | Msa0388280 | 0.804118 | 2.518484e-49 | -8.615850e-47 |
| Msa0048100 | Msa0388280 | 0.805683 | 1.185651e-49 | -8.615850e-47 |
| Msa0054480 | Msa0388280 | 0.813359 | 2.664560e-51 | -8.615850e-47 |
| Msa0054750 | Msa0388280 | 0.809382 | 1.944820e-50 | -8.615850e-47 |
| Msa0079070 | Msa0388280 | 0.812456 | 4.202295e-51 | -8.615850e-47 |
| Msa0086420 | Msa0388280 | 0.808289 | 3.331781e-50 | -8.615850e-47 |
| Msa0089820 | Msa0388280 | 0.894935 | 1.543322e-75 | -8.615850e-47 |
| Msa0096030 | Msa0388280 | 0.809332 | 1.993824e-50 | -8.615850e-47 |
| Msa0100090 | Msa0388280 | 0.818111 | 2.324179e-52 | -8.615850e-47 |
| Msa0112770 | Msa0388280 | 0.815290 | 9.970684e-52 | -8.615850e-47 |
| Msa0114060 | Msa0388280 | 0.804709 | 1.896869e-49 | -8.615850e-47 |
| Msa0115270 | Msa0388280 | 0.808058 | 3.731263e-50 | -8.615850e-47 |
| Msa0127020 | Msa0388280 | 0.800683 | 1.284563e-48 | -8.615850e-47 |
| Msa0136070 | Msa0388280 | 0.801256 | 9.808701e-49 | -8.615850e-47 |
| Msa0138020 | Msa0388280 | 0.841680 | 4.102813e-58 | -8.615850e-47 |
| Msa0140500 | Msa0388280 | -0.801643 | 8.173176e-49 | -8.615850e-47 |
| Msa0148080 | Msa0388280 | 0.807991 | 3.857017e-50 | -8.615850e-47 |
| Msa0159930 | Msa0388280 | 0.806830 | 6.797265e-50 | -8.615850e-47 |
| Msa0160550 | Msa0388280 | 0.812823 | 3.492936e-51 | -8.615850e-47 |
| Msa0169280 | Msa0388280 | 0.800133 | 1.662861e-48 | -8.615850e-47 |
| Msa0178800 | Msa0388280 | 0.833263 | 5.896442e-56 | -8.615850e-47 |
| Msa0180500 | Msa0388280 | 0.809582 | 1.762431e-50 | -8.615850e-47 |
| Msa0211150 | Msa0388280 | 0.805739 | 1.154270e-49 | -8.615850e-47 |
| Msa0212990 | Msa0388280 | 0.809716 | 1.648922e-50 | -8.615850e-47 |
| Msa0217480 | Msa0388280 | 0.802055 | 6.728265e-49 | -8.615850e-47 |
| Msa0217680 | Msa0388280 | 0.838049 | 3.622166e-57 | -8.615850e-47 |
| Msa0218370 | Msa0388280 | 0.804707 | 1.898018e-49 | -8.615850e-47 |
| Msa0224320 | Msa0388280 | 0.800773 | 1.231421e-48 | -8.615850e-47 |
| Msa0229380 | Msa0388280 | 0.807486 | 4.937699e-50 | -8.615850e-47 |
| Msa0367870 | Msa0388280 | 0.831861 | 1.312633e-55 | -8.615850e-47 |
| Msa0371250 | Msa0388280 | 0.817811 | 2.717519e-52 | -8.615850e-47 |
| Msa0376910 | Msa0388280 | 0.814334 | 1.624291e-51 | -8.615850e-47 |
| Msa0383800 | Msa0388280 | 0.809954 | 1.465953e-50 | -8.615850e-47 |
| Msa0388280 | Msa0397540 | 0.801454 | 8.938165e-49 | -8.615850e-47 |
| Msa0388280 | Msa0412840 | 0.829628 | 4.627649e-55 | -8.615850e-47 |
| Msa0388280 | Msa0416760 | 0.811058 | 8.466182e-51 | -8.615850e-47 |
| Msa0388280 | Msa0434180 | 0.807226 | 5.605977e-50 | -8.615850e-47 |
| Msa0388280 | Msa0435690 | 0.805564 | 1.256059e-49 | -8.615850e-47 |
| Msa0388280 | Msa0437400 | 0.802083 | 6.639241e-49 | -8.615850e-47 |
| Msa0388280 | Msa0440750 | 0.810700 | 1.011831e-50 | -8.615850e-47 |
| Msa0388280 | Msa0442200 | 0.832350 | 9.939983e-56 | -8.615850e-47 |
| Msa0388280 | Msa0457510 | 0.815929 | 7.185536e-52 | -8.615850e-47 |
| Msa0388280 | Msa0464120 | 0.806751 | 7.063524e-50 | -8.615850e-47 |
| Msa0388280 | Msa0471900 | 0.810908 | 9.122137e-51 | -8.615850e-47 |
| Msa0388280 | Msa0477080 | 0.806226 | 9.116010e-50 | -8.615850e-47 |
| Msa0388280 | Msa0479660 | 0.805627 | 1.218626e-49 | -8.615850e-47 |
| Msa0388280 | Msa0481530 | 0.821467 | 3.975901e-53 | -8.615850e-47 |
| Msa0388280 | Msa0484780 | 0.800231 | 1.587999e-48 | -8.615850e-47 |
| Msa0388280 | Msa0488560 | 0.814366 | 1.598000e-51 | -8.615850e-47 |
| Msa0388280 | Msa0510930 | 0.801202 | 1.006403e-48 | -8.615850e-47 |
| Msa0388280 | Msa0512750 | 0.810108 | 1.358063e-50 | -8.615850e-47 |
| Msa0388280 | Msa0518380 | 0.844960 | 5.470108e-59 | -8.615850e-47 |
| Msa0388280 | Msa0522070 | 0.800803 | 1.214050e-48 | -8.615850e-47 |
| Msa0388280 | Msa0529890 | 0.806709 | 7.212185e-50 | -8.615850e-47 |
| Msa0388280 | Msa0532980 | 0.801001 | 1.106370e-48 | -8.615850e-47 |
| Msa0388280 | Msa0549780 | 0.804416 | 2.183452e-49 | -8.615850e-47 |
| Msa0388280 | Msa0558230 | 0.801784 | 7.646200e-49 | -8.615850e-47 |
| Msa0388280 | Msa0558690 | 0.811869 | 5.641227e-51 | -8.615850e-47 |
| Msa0388280 | Msa0569220 | 0.811953 | 5.409805e-51 | -8.615850e-47 |
| Msa0388280 | Msa0572840 | 0.819343 | 1.220602e-52 | -8.615850e-47 |
| Msa0388280 | Msa0577500 | 0.810239 | 1.272196e-50 | -8.615850e-47 |
| Msa0388280 | Msa0585560 | 0.814452 | 1.529858e-51 | -8.615850e-47 |
| Msa0388280 | Msa0596800 | 0.804628 | 1.971792e-49 | -8.615850e-47 |
| Msa0388280 | Msa0607050 | 0.809668 | 1.688362e-50 | -8.615850e-47 |
| Msa0388280 | Msa0610130 | 0.811460 | 6.922645e-51 | -8.615850e-47 |
| Msa0388280 | Msa0610180 | 0.810019 | 1.419285e-50 | -8.615850e-47 |
| Msa0388280 | Msa0610430 | 0.809305 | 2.020986e-50 | -8.615850e-47 |
| Msa0388280 | Msa0617640 | 0.818321 | 2.083129e-52 | -8.615850e-47 |
| Msa0388280 | Msa0620960 | 0.814073 | 1.855077e-51 | -8.615850e-47 |
| Msa0388280 | Msa0621790 | 0.812693 | 3.728349e-51 | -8.615850e-47 |
| Msa0388280 | Msa0623070 | 0.800744 | 1.248446e-48 | -8.615850e-47 |
| Msa0388280 | Msa0625720 | 0.806461 | 8.136405e-50 | -8.615850e-47 |
| Msa0388280 | Msa0643180 | 0.814869 | 1.236912e-51 | -8.615850e-47 |
| Msa0388280 | Msa0643320 | 0.801618 | 8.270984e-49 | -8.615850e-47 |
| Msa0388280 | Msa0648080 | 0.800006 | 1.764875e-48 | -8.615850e-47 |
| Msa0388280 | Msa0661210 | 0.802166 | 6.382948e-49 | -8.615850e-47 |
| Msa0388280 | Msa0661650 | 0.804995 | 1.653072e-49 | -8.615850e-47 |
| Msa0388280 | Msa0663390 | 0.822386 | 2.435159e-53 | -8.615850e-47 |
| Msa0388280 | Msa0667740 | 0.810987 | 8.771067e-51 | -8.615850e-47 |
| Msa0388280 | Msa0672690 | 0.811976 | 5.347993e-51 | -8.615850e-47 |
| Msa0388280 | Msa0673460 | 0.803809 | 2.920201e-49 | -8.615850e-47 |
| Msa0388280 | Msa0682090 | 0.806851 | 6.729695e-50 | -8.615850e-47 |
| Msa0388280 | Msa0682140 | 0.804529 | 2.068316e-49 | -8.615850e-47 |
| Msa0388280 | Msa0682840 | 0.802755 | 4.825620e-49 | -8.615850e-47 |
| Msa0388280 | Msa0683140 | 0.801493 | 8.772424e-49 | -8.615850e-47 |
| Msa0388280 | Msa0683600 | 0.817356 | 3.440669e-52 | -8.615850e-47 |
| Msa0388280 | Msa0688390 | 0.823003 | 1.749546e-53 | -8.615850e-47 |
| Msa0388280 | Msa0692830 | 0.807641 | 4.577563e-50 | -8.615850e-47 |
| Msa0388280 | Msa0692950 | 0.801625 | 8.242739e-49 | -8.615850e-47 |
| Msa0388280 | Msa0693380 | 0.807208 | 5.656319e-50 | -8.615850e-47 |
| Msa0388280 | Msa0703780 | 0.831295 | 1.810372e-55 | -8.615850e-47 |
| Msa0388280 | Msa0703910 | 0.810089 | 1.371092e-50 | -8.615850e-47 |
| Msa0388280 | Msa0707250 | 0.853986 | 1.661857e-61 | -8.615850e-47 |
| Msa0388280 | Msa0711100 | 0.809872 | 1.526175e-50 | -8.615850e-47 |
| Msa0388280 | Msa0711150 | 0.801846 | 7.426637e-49 | -8.615850e-47 |
| Msa0388280 | Msa0711450 | 0.804430 | 2.168196e-49 | -8.615850e-47 |
| Msa0388280 | Msa0715410 | 0.820124 | 8.093707e-53 | -8.615850e-47 |
| Msa0388280 | Msa0716840 | 0.801371 | 9.293089e-49 | -8.615850e-47 |
| Msa0388280 | Msa0741440 | 0.805641 | 1.210433e-49 | -8.615850e-47 |
| Msa0388280 | Msa0749440 | 0.821754 | 3.412477e-53 | -8.615850e-47 |
| Msa0388280 | Msa0750170 | 0.813831 | 2.097553e-51 | -8.615850e-47 |
| Msa0388280 | Msa0750850 | 0.825306 | 5.037738e-54 | -8.615850e-47 |
| Msa0388280 | Msa0751850 | 0.835034 | 2.122369e-56 | -8.615850e-47 |
| Msa0388280 | Msa0753720 | 0.801145 | 1.033504e-48 | -8.615850e-47 |
| Msa0388280 | Msa0762970 | 0.801781 | 7.656080e-49 | -8.615850e-47 |
| Msa0388280 | Msa0763890 | 0.822260 | 2.604746e-53 | -8.615850e-47 |
| Msa0388280 | Msa0763920 | 0.818953 | 1.497562e-52 | -8.615850e-47 |
| Msa0388280 | Msa0794670 | 0.802281 | 6.044809e-49 | -8.615850e-47 |
| Msa0388280 | Msa0794730 | 0.819267 | 1.270647e-52 | -8.615850e-47 |
| Msa0388280 | Msa0795720 | 0.806146 | 9.479327e-50 | -8.615850e-47 |
| Msa0388280 | Msa0796700 | 0.805127 | 1.550600e-49 | -8.615850e-47 |
| Msa0388280 | Msa0817460 | 0.855296 | 6.938777e-62 | -8.615850e-47 |
| Msa0388280 | Msa0820770 | 0.808507 | 2.993595e-50 | -8.615850e-47 |
| Msa0388280 | Msa0820850 | 0.830249 | 3.266048e-55 | -8.615850e-47 |
| Msa0388280 | Msa0822500 | 0.815376 | 9.541820e-52 | -8.615850e-47 |
| Msa0388280 | Msa0830230 | 0.800502 | 1.398618e-48 | -8.615850e-47 |
| Msa0388280 | Msa0831850 | 0.841937 | 3.509528e-58 | -8.615850e-47 |
| Msa0388280 | Msa0832150 | 0.831316 | 1.789108e-55 | -8.615850e-47 |
| Msa0388280 | Msa0833460 | 0.813428 | 2.572785e-51 | -8.615850e-47 |
| Msa0388280 | Msa0844490 | 0.803673 | 3.115517e-49 | -8.615850e-47 |
| Msa0388280 | Msa0858130 | 0.822501 | 2.290343e-53 | -8.615850e-47 |
| Msa0388280 | Msa0861090 | 0.804156 | 2.473302e-49 | -8.615850e-47 |
| Msa0388280 | Msa0861130 | 0.831573 | 1.546543e-55 | -8.615850e-47 |
| Msa0388280 | Msa0861470 | 0.809676 | 1.682144e-50 | -8.615850e-47 |
| Msa0388280 | Msa0861570 | 0.809541 | 1.798107e-50 | -8.615850e-47 |
| Msa0388280 | Msa0862110 | 0.810386 | 1.182693e-50 | -8.615850e-47 |
| Msa0388280 | Msa0869120 | 0.808315 | 3.289904e-50 | -8.615850e-47 |
| Msa0388280 | Msa0876360 | 0.812937 | 3.296836e-51 | -8.615850e-47 |
| Msa0388280 | Msa0876810 | 0.805269 | 1.448602e-49 | -8.615850e-47 |
| Msa0388280 | Msa0890550 | 0.803890 | 2.808808e-49 | -8.615850e-47 |
| Msa0388280 | Msa0894710 | 0.828442 | 8.967926e-55 | -8.615850e-47 |
| Msa0388280 | Msa0897330 | 0.826020 | 3.411549e-54 | -8.615850e-47 |
| Msa0388280 | Msa0901320 | 0.818721 | 1.690549e-52 | -8.615850e-47 |
| Msa0388280 | Msa0909110 | 0.809005 | 2.343449e-50 | -8.615850e-47 |
| Msa0388280 | Msa0927380 | 0.805489 | 1.302248e-49 | -8.615850e-47 |
| Msa0388280 | Msa0931520 | 0.803468 | 3.436361e-49 | -8.615850e-47 |
| Msa0388280 | Msa0946280 | -0.805649 | 1.205287e-49 | -8.615850e-47 |
| Msa0388280 | Msa0958920 | 0.810636 | 1.044742e-50 | -8.615850e-47 |
| Msa0388280 | Msa0960740 | 0.804513 | 2.083381e-49 | -8.615850e-47 |
| Msa0388280 | Msa0969600 | 0.812259 | 4.638675e-51 | -8.615850e-47 |
| Msa0388280 | Msa0969810 | 0.824162 | 9.372999e-54 | -8.615850e-47 |
| Msa0388280 | Msa0974070 | 0.822892 | 1.857753e-53 | -8.615850e-47 |
| Msa0388280 | Msa0974080 | 0.800809 | 1.211024e-48 | -8.615850e-47 |
| Msa0388280 | Msa0978700 | 0.814440 | 1.539273e-51 | -8.615850e-47 |
| Msa0388280 | Msa0987370 | 0.817024 | 4.087076e-52 | -8.615850e-47 |
| Msa0388280 | Msa0990400 | 0.804256 | 2.357137e-49 | -8.615850e-47 |
| Msa0388280 | Msa1001390 | 0.801668 | 8.078836e-49 | -8.615850e-47 |
| Msa0388280 | Msa1002850 | 0.817576 | 3.069071e-52 | -8.615850e-47 |
| Msa0388280 | Msa1003620 | 0.805684 | 1.185129e-49 | -8.615850e-47 |
| Msa0388280 | Msa1012830 | 0.805047 | 1.611723e-49 | -8.615850e-47 |
| Msa0388280 | Msa1014540 | 0.806381 | 8.456849e-50 | -8.615850e-47 |
| Msa0388280 | Msa1025080 | 0.810014 | 1.422667e-50 | -8.615850e-47 |
| Msa0388280 | Msa1034150 | 0.812350 | 4.431970e-51 | -8.615850e-47 |
| Msa0388280 | Msa1036610 | 0.810958 | 8.896592e-51 | -8.615850e-47 |
| Msa0388280 | Msa1054990 | 0.815029 | 1.139877e-51 | -8.615850e-47 |
| Msa0388280 | Msa1064250 | 0.814210 | 1.730180e-51 | -8.615850e-47 |
| Msa0388280 | Msa1071320 | 0.809813 | 1.571614e-50 | -8.615850e-47 |
| Msa0388280 | Msa1075540 | 0.822585 | 2.189997e-53 | -8.615850e-47 |
| Msa0388280 | Msa1075650 | 0.805311 | 1.419503e-49 | -8.615850e-47 |
| Msa0388280 | Msa1082500 | 0.820918 | 5.320108e-53 | -8.615850e-47 |
| Msa0388280 | Msa1083840 | 0.809119 | 2.214684e-50 | -8.615850e-47 |
| Msa0388280 | Msa1093260 | 0.802672 | 5.020051e-49 | -8.615850e-47 |
| Msa0388280 | Msa1098420 | 0.809015 | 2.331446e-50 | -8.615850e-47 |
| Msa0388280 | Msa1103980 | 0.803658 | 3.137716e-49 | -8.615850e-47 |
| Msa0388280 | Msa1109090 | 0.801550 | 8.540880e-49 | -8.615850e-47 |
| Msa0388280 | Msa1111870 | 0.836799 | 7.569970e-57 | -8.615850e-47 |
| Msa0388280 | Msa1113170 | 0.818247 | 2.165873e-52 | -8.615850e-47 |
| Msa0388280 | Msa1129550 | 0.816799 | 4.589230e-52 | -8.615850e-47 |
| Msa0388280 | Msa1129730 | 0.811847 | 5.703887e-51 | -8.615850e-47 |
| Msa0388280 | Msa1137570 | 0.801306 | 9.581435e-49 | -8.615850e-47 |
| Msa0388280 | Msa1154280 | 0.813730 | 2.207435e-51 | -8.615850e-47 |
| Msa0388280 | Msa1162780 | 0.806879 | 6.639538e-50 | -8.615850e-47 |
| Msa0388280 | Msa1174040 | 0.826398 | 2.773395e-54 | -8.615850e-47 |
| Msa0388280 | Msa1181250 | 0.819480 | 1.135820e-52 | -8.615850e-47 |
| Msa0388280 | Msa1181330 | 0.815175 | 1.057560e-51 | -8.615850e-47 |
| Msa0388280 | Msa1204530 | 0.831092 | 2.030782e-55 | -8.615850e-47 |
| Msa0388280 | Msa1204630 | 0.820939 | 5.261225e-53 | -8.615850e-47 |
| Msa0388280 | Msa1207310 | 0.833468 | 5.240961e-56 | -8.615850e-47 |
| Msa0388280 | Msa1210020 | 0.814318 | 1.637671e-51 | -8.615850e-47 |
| Msa0388280 | Msa1225130 | 0.830378 | 3.038294e-55 | -8.615850e-47 |
| Msa0388280 | Msa1228590 | 0.814128 | 1.803960e-51 | -8.615850e-47 |
| Msa0388280 | Msa1231840 | 0.808341 | 3.248381e-50 | -8.615850e-47 |
| Msa0388280 | Msa1238770 | 0.826338 | 2.866494e-54 | -8.615850e-47 |
| Msa0388280 | Msa1246360 | 0.805565 | 1.255448e-49 | -8.615850e-47 |
| Msa0388280 | Msa1246510 | 0.804682 | 1.921696e-49 | -8.615850e-47 |
| Msa0388280 | Msa1270660 | 0.808788 | 2.607219e-50 | -8.615850e-47 |
| Msa0388280 | Msa1275360 | 0.802463 | 5.543931e-49 | -8.615850e-47 |
| Msa0388280 | Msa1277660 | 0.805713 | 1.168879e-49 | -8.615850e-47 |
| Msa0388280 | Msa1284680 | 0.814417 | 1.556879e-51 | -8.615850e-47 |
| Msa0388280 | Msa1287460 | 0.805870 | 1.083284e-49 | -8.615850e-47 |
| Msa0388280 | Msa1295330 | 0.807724 | 4.395680e-50 | -8.615850e-47 |
| Msa0388280 | Msa1296760 | 0.814995 | 1.159856e-51 | -8.615850e-47 |
| Msa0388280 | Msa1297290 | 0.802259 | 6.107199e-49 | -8.615850e-47 |
| Msa0388280 | Msa1298510 | 0.812322 | 4.493867e-51 | -8.615850e-47 |
| Msa0388280 | Msa1302640 | 0.807240 | 5.567773e-50 | -8.615850e-47 |
| Msa0388280 | Msa1305810 | 0.816049 | 6.756940e-52 | -8.615850e-47 |
| Msa0388280 | Msa1306560 | 0.822728 | 2.028503e-53 | -8.615850e-47 |
| Msa0388280 | Msa1306840 | 0.807274 | 5.476817e-50 | -8.615850e-47 |
| Msa0388280 | Msa1308870 | 0.811123 | 8.194093e-51 | -8.615850e-47 |
| Msa0388280 | Msa1331000 | 0.842743 | 2.146101e-58 | -8.615850e-47 |
| Msa0388280 | Msa1331320 | 0.837351 | 5.470832e-57 | -8.615850e-47 |
| Msa0388280 | Msa1331350 | 0.810127 | 1.345323e-50 | -8.615850e-47 |
| Msa0388280 | Msa1337480 | 0.800919 | 1.149812e-48 | -8.615850e-47 |
| Msa0388280 | Msa1346840 | 0.816032 | 6.814063e-52 | -8.615850e-47 |
| Msa0388280 | Msa1355890 | 0.814484 | 1.504736e-51 | -8.615850e-47 |
| Msa0388280 | Msa1358670 | 0.812353 | 4.424389e-51 | -8.615850e-47 |
| Msa0388280 | Msa1359630 | 0.802372 | 5.787650e-49 | -8.615850e-47 |
| Msa0388280 | Msa1370070 | -0.821830 | 3.277821e-53 | -8.615850e-47 |
| Msa0388280 | Msa1371940 | 0.819592 | 1.071371e-52 | -8.615850e-47 |
| Msa0388280 | Msa1372150 | 0.810568 | 1.080251e-50 | -8.615850e-47 |
| Msa0388280 | Msa1373030 | 0.814164 | 1.770656e-51 | -8.615850e-47 |
| Msa0388280 | Msa1374470 | 0.801034 | 1.089451e-48 | -8.615850e-47 |
| Msa0388280 | Msa1375380 | 0.823058 | 1.699406e-53 | -8.615850e-47 |
| Msa0388280 | Msa1376130 | 0.820667 | 6.076360e-53 | -8.615850e-47 |
| Msa0388280 | Msa1377570 | 0.826434 | 2.718377e-54 | -8.615850e-47 |
| Msa0388280 | Msa1385000 | 0.800668 | 1.293562e-48 | -8.615850e-47 |
| Msa0388280 | Msa1393570 | 0.819995 | 8.666494e-53 | -8.615850e-47 |
| Msa0388280 | Msa1394310 | 0.804269 | 2.342718e-49 | -8.615850e-47 |
| Msa0388280 | Msa1394380 | 0.828728 | 7.652619e-55 | -8.615850e-47 |
| Msa0388280 | Msa1397120 | 0.806208 | 9.195749e-50 | -8.615850e-47 |
| Msa0388280 | Msa1403340 | 0.823594 | 1.273369e-53 | -8.615850e-47 |
| Msa0388280 | Msa1403890 | 0.801800 | 7.588654e-49 | -8.615850e-47 |
| Msa0388280 | Msa1412130 | 0.821695 | 3.522185e-53 | -8.615850e-47 |
| Msa0388280 | Msa1412530 | 0.802178 | 6.344661e-49 | -8.615850e-47 |
| Msa0388280 | Msa1418850 | 0.819346 | 1.218844e-52 | -8.615850e-47 |
| Msa0388280 | Msa1419960 | 0.801386 | 9.226535e-49 | -8.615850e-47 |
| Msa0388280 | Msa1425260 | 0.810215 | 1.287682e-50 | -8.615850e-47 |
| Msa0388280 | Msa1427230 | 0.813506 | 2.473018e-51 | -8.615850e-47 |
| Msa0388280 | Msa1436650 | 0.816608 | 5.065954e-52 | -8.615850e-47 |
| Msa0388280 | Msa1443850 | 0.809197 | 2.130984e-50 | -8.615850e-47 |
| Msa0388280 | Msa1445390 | -0.800104 | 1.685370e-48 | -8.615850e-47 |
| Msa0388280 | Msa1448560 | 0.830269 | 3.229212e-55 | -8.615850e-47 |
| Msa0388280 | Msa1454620 | 0.818294 | 2.112613e-52 | -8.615850e-47 |
| Msa0388280 | Msa1460050 | 0.827669 | 1.377332e-54 | -8.615850e-47 |
| Msa0388280 | Msa1460830 | 0.806228 | 9.109009e-50 | -8.615850e-47 |
| Msa0388280 | Msa1463900 | 0.826017 | 3.415954e-54 | -8.615850e-47 |
| Msa0388280 | Msa1464900 | 0.810743 | 9.904998e-51 | -8.615850e-47 |
| Msa0388280 | Msa1466540 | 0.809522 | 1.815643e-50 | -8.615850e-47 |
| Msa0241140 | Msa0388280 | 0.835588 | 1.537671e-56 | -8.615850e-47 |
| Msa0257500 | Msa0388280 | 0.837898 | 3.961242e-57 | -8.615850e-47 |
| Msa0260680 | Msa0388280 | 0.805987 | 1.023673e-49 | -8.615850e-47 |
| Msa0265380 | Msa0388280 | 0.832146 | 1.116544e-55 | -8.615850e-47 |
| Msa0279220 | Msa0388280 | 0.820829 | 5.578990e-53 | -8.615850e-47 |
| Msa0279240 | Msa0388280 | 0.827472 | 1.535096e-54 | -8.615850e-47 |
| Msa0280090 | Msa0388280 | 0.809729 | 1.638463e-50 | -8.615850e-47 |
| Msa0285450 | Msa0388280 | 0.802416 | 5.667892e-49 | -8.615850e-47 |
| Msa0288100 | Msa0388280 | 0.839038 | 2.012362e-57 | -8.615850e-47 |
| Msa0296480 | Msa0388280 | 0.818058 | 2.389949e-52 | -8.615850e-47 |
| Msa0303360 | Msa0388280 | 0.819813 | 9.534880e-53 | -8.615850e-47 |
| Msa0309770 | Msa0388280 | 0.839057 | 1.990009e-57 | -8.615850e-47 |
| Msa0318980 | Msa0388280 | 0.838371 | 2.992408e-57 | -8.615850e-47 |
| Msa0330340 | Msa0388280 | 0.801185 | 1.014616e-48 | -8.615850e-47 |
| Msa0340450 | Msa0388280 | 0.800270 | 1.559568e-48 | -8.615850e-47 |
| Msa0342010 | Msa0388280 | 0.803636 | 3.172209e-49 | -8.615850e-47 |
| Msa0345970 | Msa0388280 | 0.816724 | 4.771869e-52 | -8.615850e-47 |
| Msa0357830 | Msa0388280 | 0.805977 | 1.028519e-49 | -8.615850e-47 |
| Msa0363790 | Msa0388280 | 0.834792 | 2.441916e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0388280 | MtrunA17_Chr1g0208631 | 95.047 | 424 | 13 | 2 | 1 | 420 | 1 | 420 | 0.0 | 809 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 92 sgRNAs with CRISPR-Local
Find 55 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTTGTTCTTTCAATTTA+TGG | 0.041976 | 3_1:-92688005 | Msa0388280:CDS |
| TATGAGCAAGTGCTTGTTAA+TGG | 0.171126 | 3_1:-92686904 | Msa0388280:CDS |
| AGAATCTTGAATTGAGTTTC+TGG | 0.180520 | 3_1:-92693748 | Msa0388280:five_prime_UTR |
| AGAAGAAGAAGAAGCGTTAT+TGG | 0.205836 | 3_1:-92693658 | Msa0388280:CDS |
| TATGTTTAGGAAACTGTATT+TGG | 0.250546 | 3_1:-92693356 | Msa0388280:CDS |
| CTATACATGTATTAACTAAA+TGG | 0.275749 | 3_1:+92686777 | None:intergenic |
| TCAGCTTCTTTCTTATATTC+AGG | 0.281112 | 3_1:+92693432 | None:intergenic |
| CCTCAATCTTGCATTAAATA+AGG | 0.285993 | 3_1:-92693301 | Msa0388280:intron |
| ATCGGAGTGTTGTTGCAATT+TGG | 0.294706 | 3_1:+92693557 | None:intergenic |
| TTGAAAGAACAAAGCAAGTT+TGG | 0.297122 | 3_1:+92688012 | None:intergenic |
| GTCAATGTCATCCAGATTAA+AGG | 0.298729 | 3_1:-92687183 | Msa0388280:intron |
| TGACAAAGAATCTTCTTGTT+AGG | 0.306855 | 3_1:+92692249 | None:intergenic |
| ATGAATTTATTGTCCAAGTC+TGG | 0.309921 | 3_1:-92686752 | Msa0388280:three_prime_UTR |
| GCAGATGCTTGGTTATGTTT+AGG | 0.314045 | 3_1:-92693369 | Msa0388280:CDS |
| CGCCTCTTTGGCAGCATCAT+TGG | 0.317195 | 3_1:-92689070 | Msa0388280:CDS |
| AATTTGGAGGTTCTGTCGTC+AGG | 0.349437 | 3_1:+92693573 | None:intergenic |
| GGAAGGTGTTATTCTTAATC+AGG | 0.352024 | 3_1:-92688877 | Msa0388280:CDS |
| ATCCAAAGCAATTGCTTCCT+TGG | 0.352141 | 3_1:+92690465 | None:intergenic |
| AATATCTAGAGAACTATGAT+AGG | 0.352347 | 3_1:-92689454 | Msa0388280:CDS |
| ATTTAGCAGTGGTCTGTTCA+TGG | 0.356390 | 3_1:+92686826 | None:intergenic |
| AGCTAAGCGAATCGCCTCTT+TGG | 0.372288 | 3_1:-92689082 | Msa0388280:CDS |
| ATGCCTAAAGCAAAACTTGA+TGG | 0.390052 | 3_1:+92686664 | None:intergenic |
| ACCCTCTGACAGAAGGTCTA+TGG | 0.391113 | 3_1:+92688925 | None:intergenic |
| ATCTTCTTGACAGATAATCT+TGG | 0.396486 | 3_1:-92690004 | Msa0388280:intron |
| AGGAGTGAGATGGAGAATTC+AGG | 0.412289 | 3_1:-92693696 | Msa0388280:exon |
| TGCCAAGGAAGCAATTGCTT+TGG | 0.414023 | 3_1:-92690467 | Msa0388280:CDS |
| GAATCTTGAATTGAGTTTCT+GGG | 0.419034 | 3_1:-92693747 | Msa0388280:five_prime_UTR |
| TTCAATTTATGGTGTACGTC+AGG | 0.425085 | 3_1:-92687994 | Msa0388280:CDS |
| GGAGTGTAAAGTTTCACATT+TGG | 0.427323 | 3_1:-92686700 | Msa0388280:three_prime_UTR |
| TTAAACCTCCATTCCATTCG+AGG | 0.447738 | 3_1:-92693716 | Msa0388280:five_prime_UTR |
| CCAGTTCAAATCTATACGCC+TGG | 0.459498 | 3_1:-92686932 | Msa0388280:CDS |
| AACTATGATAGGGCCCTTAG+TGG | 0.461017 | 3_1:-92689443 | Msa0388280:CDS |
| CTGCGGTTGTTACCCAGACT+TGG | 0.461229 | 3_1:+92686739 | None:intergenic |
| ATCCATCTCTTGCAGATGCT+TGG | 0.463826 | 3_1:-92693380 | Msa0388280:CDS |
| TAGGGCCCTTAGTGGATTTG+AGG | 0.467829 | 3_1:-92689435 | Msa0388280:CDS |
| TCCTCTGCAGCGTTGAGACC+TGG | 0.471479 | 3_1:+92689395 | None:intergenic |
| ATTTGAGGCTGCTGCTTCAA+AGG | 0.480860 | 3_1:-92689420 | Msa0388280:CDS |
| TTCGTGACGTTGATGTGTCC+TGG | 0.490545 | 3_1:-92687128 | Msa0388280:CDS |
| GCACTATTAAAGTAAAAGTC+AGG | 0.491009 | 3_1:+92689740 | None:intergenic |
| GGAGTGTTGTTGCAATTTGG+AGG | 0.491155 | 3_1:+92693560 | None:intergenic |
| ATTAAAGTAAAAGTCAGGAT+TGG | 0.509600 | 3_1:+92689745 | None:intergenic |
| GCTGCTGCTTCAAAGGATCC+AGG | 0.513394 | 3_1:-92689413 | Msa0388280:CDS |
| ATCTCACTCCTCGAATGGAA+TGG | 0.513502 | 3_1:+92693708 | None:intergenic |
| ATGTACCAGGAGAAAGATGA+AGG | 0.513743 | 3_1:-92689776 | Msa0388280:intron |
| TGATGTGTCCTGGAAGGAAA+AGG | 0.513904 | 3_1:-92687118 | Msa0388280:intron |
| CAGCAGCCTCAAATCCACTA+AGG | 0.514190 | 3_1:+92689429 | None:intergenic |
| CCAGGCGTATAGATTTGAAC+TGG | 0.515665 | 3_1:+92686932 | None:intergenic |
| ATTTGGAGGTTCTGTCGTCA+GGG | 0.526347 | 3_1:+92693574 | None:intergenic |
| TCTCCATCTCACTCCTCGAA+TGG | 0.528834 | 3_1:+92693703 | None:intergenic |
| GCAGTATTTGAACATCTTCG+AGG | 0.534719 | 3_1:-92693474 | Msa0388280:CDS |
| AGCAATTGCTTTGGATGTCA+AGG | 0.535720 | 3_1:-92690458 | Msa0388280:CDS |
| GCACTTGCTCATAGAAATCC+AGG | 0.536136 | 3_1:+92686914 | None:intergenic |
| ATTGCTTTGGATGTCAAGGA+TGG | 0.539541 | 3_1:-92690454 | Msa0388280:CDS |
| TGAATTTATTGTCCAAGTCT+GGG | 0.543788 | 3_1:-92686751 | Msa0388280:three_prime_UTR |
| ATAGAGCTCTAGCAGTAGAC+GGG | 0.546155 | 3_1:-92688898 | Msa0388280:CDS |
| CCTTATTTAATGCAAGATTG+AGG | 0.551766 | 3_1:+92693301 | None:intergenic |
| TCTATGGTAACTGTTCTGTA+TGG | 0.559486 | 3_1:+92688941 | None:intergenic |
| AATAGAGCTCTAGCAGTAGA+CGG | 0.559874 | 3_1:-92688899 | Msa0388280:CDS |
| ATTCCATTCGAGGAGTGAGA+TGG | 0.563361 | 3_1:-92693706 | Msa0388280:exon |
| TGTCAATTTACTTGACAATG+TGG | 0.565680 | 3_1:-92689360 | Msa0388280:CDS |
| TTATGGTGTACGTCAGGATG+TGG | 0.566091 | 3_1:-92687988 | Msa0388280:intron |
| GAGTAGAGTGAGAATGAGAT+CGG | 0.566165 | 3_1:+92693539 | None:intergenic |
| AACCAAGCATCTGCAAGAGA+TGG | 0.566217 | 3_1:+92693378 | None:intergenic |
| GTTATTCTTAATCAGGAGTG+AGG | 0.569424 | 3_1:-92688870 | Msa0388280:CDS |
| AGGTCTCAACGCTGCAGAGG+AGG | 0.569792 | 3_1:-92689393 | Msa0388280:CDS |
| ACATCTTCGAGGAAAAGTGT+TGG | 0.571025 | 3_1:-92693463 | Msa0388280:CDS |
| TCAAATACTGCTCGTTGCGT+AGG | 0.576970 | 3_1:+92693486 | None:intergenic |
| AGCCAATGATGCTGCCAAAG+AGG | 0.579234 | 3_1:+92689068 | None:intergenic |
| AGCTCTAGCAGTAGACGGGA+AGG | 0.584112 | 3_1:-92688894 | Msa0388280:CDS |
| ACATCAACGTCACGAAAACA+AGG | 0.587953 | 3_1:+92687135 | None:intergenic |
| TTGCTTTGGATGTCAAGGAT+GGG | 0.590474 | 3_1:-92690453 | Msa0388280:CDS |
| ATATCTAGAGAACTATGATA+GGG | 0.601068 | 3_1:-92689453 | Msa0388280:CDS |
| ATGTCAAGGATGGGAACTCT+TGG | 0.601935 | 3_1:-92690444 | Msa0388280:CDS |
| CAATGTGGACAATCTGTTGA+GGG | 0.603379 | 3_1:-92689345 | Msa0388280:intron |
| AGCAGCCTCAAATCCACTAA+GGG | 0.606061 | 3_1:+92689430 | None:intergenic |
| TACCATAGACCTTCTGTCAG+AGG | 0.606220 | 3_1:-92688927 | Msa0388280:CDS |
| TGAAAGCATTCAACATGCCA+AGG | 0.607329 | 3_1:-92690482 | Msa0388280:CDS |
| TATTAAGACCCTCTGACAGA+AGG | 0.607470 | 3_1:+92688918 | None:intergenic |
| ACCATAGACCTTCTGTCAGA+GGG | 0.609970 | 3_1:-92688926 | Msa0388280:CDS |
| AGATGGATGAAAAGCAAGCT+CGG | 0.610640 | 3_1:-92693780 | Msa0388280:five_prime_UTR |
| TCCAGGTCTCAACGCTGCAG+AGG | 0.614379 | 3_1:-92689396 | Msa0388280:CDS |
| TTATTCTTAATCAGGAGTGA+GGG | 0.616578 | 3_1:-92688869 | Msa0388280:CDS |
| TCACTCCTCGAATGGAATGG+AGG | 0.624288 | 3_1:+92693711 | None:intergenic |
| GAGATGGAGAATTCAGGCAG+CGG | 0.643588 | 3_1:-92693690 | Msa0388280:CDS |
| AAGAAGGTAAAGTTCGTCAG+TGG | 0.644341 | 3_1:+92693620 | None:intergenic |
| AATGTCATCCAGATTAAAGG+AGG | 0.656874 | 3_1:-92687180 | Msa0388280:intron |
| TATAGACACTGTATGCGACA+TGG | 0.659044 | 3_1:-92686613 | Msa0388280:three_prime_UTR |
| GCAACTCATCTATTTAGCAG+TGG | 0.660935 | 3_1:+92686815 | None:intergenic |
| TGACGTTGATGTGTCCTGGA+AGG | 0.663851 | 3_1:-92687124 | Msa0388280:CDS |
| TGTACCAGGAGAAAGATGAA+GGG | 0.665997 | 3_1:-92689775 | Msa0388280:intron |
| ACAATGTGGACAATCTGTTG+AGG | 0.676219 | 3_1:-92689346 | Msa0388280:CDS |
| GATGTACGAATAGCTTGCTG+AGG | 0.687153 | 3_1:+92686868 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTCTAAAATAAAAGTT+TGG | - | chr3_1:92692978-92692997 | Msa0388280:intron | 10.0% |
| !!! | ATTTTCTAAAATAAAAGTTT+GGG | - | chr3_1:92692979-92692998 | Msa0388280:intron | 10.0% |
| !!! | GTATTTTTTTTTTTTTTTTG+AGG | - | chr3_1:92693752-92693771 | Msa0388280:five_prime_UTR | 10.0% |
| !! | AAAAAAAAAAAAACCTAAGA+TGG | - | chr3_1:92686461-92686480 | Msa0388280:three_prime_UTR | 15.0% |
| !!! | TTTTCTAAAATAAAAGTTTG+GGG | - | chr3_1:92692980-92692999 | Msa0388280:intron | 15.0% |
| !! | TTGAAAAGCTATAAAATAAG+TGG | + | chr3_1:92692825-92692844 | None:intergenic | 20.0% |
| !! | AAATAAATATTCAACATGCT+TGG | + | chr3_1:92692963-92692982 | None:intergenic | 20.0% |
| !! | TGATAACTATAACAGTAATA+AGG | + | chr3_1:92693023-92693042 | None:intergenic | 20.0% |
| !!! | TGATTTGTTTTATTACAACA+GGG | + | chr3_1:92693251-92693270 | None:intergenic | 20.0% |
| !!! | ATGATTTGTTTTATTACAAC+AGG | + | chr3_1:92693252-92693271 | None:intergenic | 20.0% |
| !! | AACAAATCATATTCTGATTA+AGG | - | chr3_1:92693262-92693281 | Msa0388280:intron | 20.0% |
| !!! | TTTTTAAATGTACATGAATG+AGG | + | chr3_1:92693298-92693317 | None:intergenic | 20.0% |
| !! | CTATACATGTATTAACTAAA+TGG | + | chr3_1:92693484-92693503 | None:intergenic | 20.0% |
| ! | TTTGTCTACTATAACTTGAT+GGG | + | chr3_1:92692678-92692697 | None:intergenic | 25.0% |
| ! | ATTTGTCTACTATAACTTGA+TGG | + | chr3_1:92692679-92692698 | None:intergenic | 25.0% |
| !!! | GTTCATTTTTCTCTCTTTAT+TGG | - | chr3_1:92692708-92692727 | Msa0388280:intron | 25.0% |
| !!! | ATCCTTATTTTCTCTTTGAT+TGG | - | chr3_1:92692865-92692884 | Msa0388280:intron | 25.0% |
| ! | TTCCAATCAAAGAGAAAATA+AGG | + | chr3_1:92692870-92692889 | None:intergenic | 25.0% |
| ! | TATAACAGTAATAAGGAAAG+GGG | + | chr3_1:92693016-92693035 | None:intergenic | 25.0% |
| ! | CTATAACAGTAATAAGGAAA+GGG | + | chr3_1:92693017-92693036 | None:intergenic | 25.0% |
| ! | ACTATAACAGTAATAAGGAA+AGG | + | chr3_1:92693018-92693037 | None:intergenic | 25.0% |
| ! | GTTATCAATTGAAGAATCAA+TGG | - | chr3_1:92693036-92693055 | Msa0388280:intron | 25.0% |
| !!! | AAGTTTCACATTTGGTTTTA+TGG | - | chr3_1:92693566-92693585 | Msa0388280:CDS | 25.0% |
| TTGTCTACTATAACTTGATG+GGG | + | chr3_1:92692677-92692696 | None:intergenic | 30.0% | |
| !! | ATATAATAGAAGCACTTGCT+TGG | - | chr3_1:92692756-92692775 | Msa0388280:intron | 30.0% |
| ! | TATAGCTTTTCAAAGTAGCT+TGG | - | chr3_1:92692832-92692851 | Msa0388280:intron | 30.0% |
| ATAACAGTAATAAGGAAAGG+GGG | + | chr3_1:92693015-92693034 | None:intergenic | 30.0% | |
| ATGAATTTATTGTCCAAGTC+TGG | - | chr3_1:92693506-92693525 | Msa0388280:CDS | 30.0% | |
| TGAATTTATTGTCCAAGTCT+GGG | - | chr3_1:92693507-92693526 | Msa0388280:CDS | 30.0% | |
| ! | CAGTTTCTTTTTCTATTCTG+CGG | + | chr3_1:92693539-92693558 | None:intergenic | 30.0% |
| ! | TTACCATCAAGTTTTGCTTT+AGG | - | chr3_1:92693591-92693610 | Msa0388280:CDS | 30.0% |
| AATCTGGATGACATTGACAA+GGG | + | chr3_1:92693073-92693092 | None:intergenic | 35.0% | |
| TAATCTGGATGACATTGACA+AGG | + | chr3_1:92693074-92693093 | None:intergenic | 35.0% | |
| GTCAATGTCATCCAGATTAA+AGG | - | chr3_1:92693075-92693094 | Msa0388280:intron | 35.0% | |
| AATGTCATCCAGATTAAAGG+AGG | - | chr3_1:92693078-92693097 | Msa0388280:intron | 35.0% | |
| ! | TATGAGCAAGTGCTTGTTAA+TGG | - | chr3_1:92693354-92693373 | Msa0388280:CDS | 35.0% |
| CGCAGAATAGAAAAAGAAAC+TGG | - | chr3_1:92693537-92693556 | Msa0388280:CDS | 35.0% | |
| GGAGTGTAAAGTTTCACATT+TGG | - | chr3_1:92693558-92693577 | Msa0388280:CDS | 35.0% | |
| ATGCCTAAAGCAAAACTTGA+TGG | + | chr3_1:92693597-92693616 | None:intergenic | 35.0% | |
| !! | GCTTGCTTTTCATCCATCTT+AGG | + | chr3_1:92686477-92686496 | None:intergenic | 40.0% |
| ACATCAACGTCACGAAAACA+AGG | + | chr3_1:92693126-92693145 | None:intergenic | 40.0% | |
| ! | AAAGTGTACCTTTTCCTTCC+AGG | + | chr3_1:92693151-92693170 | None:intergenic | 40.0% |
| ATTTAGCAGTGGTCTGTTCA+TGG | + | chr3_1:92693435-92693454 | None:intergenic | 40.0% | |
| GCAACTCATCTATTTAGCAG+TGG | + | chr3_1:92693446-92693465 | None:intergenic | 40.0% | |
| TATAGACACTGTATGCGACA+TGG | - | chr3_1:92693645-92693664 | Msa0388280:CDS | 40.0% | |
| ! | TGATGGGGTCTTATATCAGC+TGG | + | chr3_1:92692662-92692681 | None:intergenic | 45.0% |
| GCTGATCTCCTCCTTTAATC+TGG | + | chr3_1:92693089-92693108 | None:intergenic | 45.0% | |
| TGATGTGTCCTGGAAGGAAA+AGG | - | chr3_1:92693140-92693159 | Msa0388280:intron | 45.0% | |
| CCAGGCGTATAGATTTGAAC+TGG | + | chr3_1:92693329-92693348 | None:intergenic | 45.0% | |
| CCAGTTCAAATCTATACGCC+TGG | - | chr3_1:92693326-92693345 | Msa0388280:CDS | 45.0% | |
| GCACTTGCTCATAGAAATCC+AGG | + | chr3_1:92693347-92693366 | None:intergenic | 45.0% | |
| !! | GATGTACGAATAGCTTGCTG+AGG | + | chr3_1:92693393-92693412 | None:intergenic | 45.0% |
| TTCGTGACGTTGATGTGTCC+TGG | - | chr3_1:92693130-92693149 | Msa0388280:intron | 50.0% | |
| TGACGTTGATGTGTCCTGGA+AGG | - | chr3_1:92693134-92693153 | Msa0388280:intron | 50.0% | |
| CTGCGGTTGTTACCCAGACT+TGG | + | chr3_1:92693522-92693541 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 92686450 | 92693830 | 92686450 | ID=Msa0388280;Name=Msa0388280 |
| chr3_1 | mRNA | 92686450 | 92693830 | 92686450 | ID=Msa0388280-mRNA-1;Parent=Msa0388280;Name=Msa0388280-mRNA-1;_AED=0.13;_eAED=0.13;_QI=121|0.9|0.90|1|1|1|11|393|420 |
| chr3_1 | exon | 92686450 | 92686959 | 92686450 | ID=Msa0388280-mRNA-1:exon:26089;Parent=Msa0388280-mRNA-1 |
| chr3_1 | exon | 92687119 | 92687190 | 92687119 | ID=Msa0388280-mRNA-1:exon:26088;Parent=Msa0388280-mRNA-1 |
| chr3_1 | exon | 92687989 | 92688058 | 92687989 | ID=Msa0388280-mRNA-1:exon:26087;Parent=Msa0388280-mRNA-1 |
| chr3_1 | exon | 92688857 | 92688971 | 92688857 | ID=Msa0388280-mRNA-1:exon:26086;Parent=Msa0388280-mRNA-1 |
| chr3_1 | exon | 92689058 | 92689115 | 92689058 | ID=Msa0388280-mRNA-1:exon:26085;Parent=Msa0388280-mRNA-1 |
| chr3_1 | exon | 92689346 | 92689483 | 92689346 | ID=Msa0388280-mRNA-1:exon:26084;Parent=Msa0388280-mRNA-1 |
| chr3_1 | exon | 92689736 | 92689789 | 92689736 | ID=Msa0388280-mRNA-1:exon:26083;Parent=Msa0388280-mRNA-1 |
| chr3_1 | exon | 92689919 | 92690013 | 92689919 | ID=Msa0388280-mRNA-1:exon:26082;Parent=Msa0388280-mRNA-1 |
| chr3_1 | exon | 92690443 | 92690532 | 92690443 | ID=Msa0388280-mRNA-1:exon:26081;Parent=Msa0388280-mRNA-1 |
| chr3_1 | exon | 92692229 | 92692274 | 92692229 | ID=Msa0388280-mRNA-1:exon:26080;Parent=Msa0388280-mRNA-1 |
| chr3_1 | exon | 92693302 | 92693830 | 92693302 | ID=Msa0388280-mRNA-1:exon:26079;Parent=Msa0388280-mRNA-1 |
| chr3_1 | five_prime_UTR | 92693710 | 92693830 | 92693710 | ID=Msa0388280-mRNA-1:five_prime_utr;Parent=Msa0388280-mRNA-1 |
| chr3_1 | CDS | 92693302 | 92693709 | 92693302 | ID=Msa0388280-mRNA-1:cds;Parent=Msa0388280-mRNA-1 |
| chr3_1 | CDS | 92692229 | 92692274 | 92692229 | ID=Msa0388280-mRNA-1:cds;Parent=Msa0388280-mRNA-1 |
| chr3_1 | CDS | 92690443 | 92690532 | 92690443 | ID=Msa0388280-mRNA-1:cds;Parent=Msa0388280-mRNA-1 |
| chr3_1 | CDS | 92689919 | 92690013 | 92689919 | ID=Msa0388280-mRNA-1:cds;Parent=Msa0388280-mRNA-1 |
| chr3_1 | CDS | 92689736 | 92689789 | 92689736 | ID=Msa0388280-mRNA-1:cds;Parent=Msa0388280-mRNA-1 |
| chr3_1 | CDS | 92689346 | 92689483 | 92689346 | ID=Msa0388280-mRNA-1:cds;Parent=Msa0388280-mRNA-1 |
| chr3_1 | CDS | 92689058 | 92689115 | 92689058 | ID=Msa0388280-mRNA-1:cds;Parent=Msa0388280-mRNA-1 |
| chr3_1 | CDS | 92688857 | 92688971 | 92688857 | ID=Msa0388280-mRNA-1:cds;Parent=Msa0388280-mRNA-1 |
| chr3_1 | CDS | 92687989 | 92688058 | 92687989 | ID=Msa0388280-mRNA-1:cds;Parent=Msa0388280-mRNA-1 |
| chr3_1 | CDS | 92687119 | 92687190 | 92687119 | ID=Msa0388280-mRNA-1:cds;Parent=Msa0388280-mRNA-1 |
| chr3_1 | CDS | 92686843 | 92686959 | 92686843 | ID=Msa0388280-mRNA-1:cds;Parent=Msa0388280-mRNA-1 |
| chr3_1 | three_prime_UTR | 92686450 | 92686842 | 92686450 | ID=Msa0388280-mRNA-1:three_prime_utr;Parent=Msa0388280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
