Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0395970 | QJS95126.1 | 93.651 | 378 | 9 | 2 | 1 | 377 | 1 | 364 | 0.0 | 714 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0395970 | sp|Q84MZ4|TF3A_ARATH | 51.807 | 415 | 133 | 4 | 2 | 364 | 3 | 402 | 3.11e-142 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0395970 | A0A6M4W3T1 | 93.651 | 378 | 9 | 2 | 1 | 377 | 1 | 364 | 0.0 | 714 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0395970 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0395970 | 0.816127 | 6.489923e-52 | -8.615850e-47 |
| Msa0011170 | Msa0395970 | 0.833477 | 5.213384e-56 | -8.615850e-47 |
| Msa0012040 | Msa0395970 | 0.813691 | 2.251363e-51 | -8.615850e-47 |
| Msa0012080 | Msa0395970 | 0.800604 | 1.333506e-48 | -8.615850e-47 |
| Msa0017510 | Msa0395970 | 0.812556 | 3.994484e-51 | -8.615850e-47 |
| Msa0025730 | Msa0395970 | 0.807208 | 5.655918e-50 | -8.615850e-47 |
| Msa0037700 | Msa0395970 | 0.804361 | 2.241920e-49 | -8.615850e-47 |
| Msa0045920 | Msa0395970 | 0.800006 | 1.764203e-48 | -8.615850e-47 |
| Msa0054440 | Msa0395970 | 0.805896 | 1.069831e-49 | -8.615850e-47 |
| Msa0054480 | Msa0395970 | 0.835242 | 1.880751e-56 | -8.615850e-47 |
| Msa0061080 | Msa0395970 | 0.820849 | 5.519011e-53 | -8.615850e-47 |
| Msa0068680 | Msa0395970 | 0.808631 | 2.816145e-50 | -8.615850e-47 |
| Msa0077610 | Msa0395970 | 0.817847 | 2.667326e-52 | -8.615850e-47 |
| Msa0077670 | Msa0395970 | 0.806589 | 7.645539e-50 | -8.615850e-47 |
| Msa0086650 | Msa0395970 | 0.802390 | 5.740085e-49 | -8.615850e-47 |
| Msa0089380 | Msa0395970 | 0.800893 | 1.163859e-48 | -8.615850e-47 |
| Msa0112750 | Msa0395970 | 0.809136 | 2.196838e-50 | -8.615850e-47 |
| Msa0116770 | Msa0395970 | 0.811223 | 7.795967e-51 | -8.615850e-47 |
| Msa0119960 | Msa0395970 | 0.808195 | 3.489899e-50 | -8.615850e-47 |
| Msa0128020 | Msa0395970 | 0.804141 | 2.490226e-49 | -8.615850e-47 |
| Msa0131600 | Msa0395970 | 0.802019 | 6.842898e-49 | -8.615850e-47 |
| Msa0133130 | Msa0395970 | 0.809272 | 2.054121e-50 | -8.615850e-47 |
| Msa0136070 | Msa0395970 | 0.816747 | 4.714048e-52 | -8.615850e-47 |
| Msa0136100 | Msa0395970 | 0.801667 | 8.082738e-49 | -8.615850e-47 |
| Msa0150820 | Msa0395970 | 0.825503 | 4.525402e-54 | -8.615850e-47 |
| Msa0157290 | Msa0395970 | 0.812277 | 4.596371e-51 | -8.615850e-47 |
| Msa0157310 | Msa0395970 | 0.822274 | 2.586047e-53 | -8.615850e-47 |
| Msa0160550 | Msa0395970 | 0.802331 | 5.901836e-49 | -8.615850e-47 |
| Msa0165210 | Msa0395970 | 0.816127 | 6.490093e-52 | -8.615850e-47 |
| Msa0169280 | Msa0395970 | 0.800065 | 1.716456e-48 | -8.615850e-47 |
| Msa0173990 | Msa0395970 | 0.819163 | 1.341946e-52 | -8.615850e-47 |
| Msa0178930 | Msa0395970 | 0.829721 | 4.393449e-55 | -8.615850e-47 |
| Msa0188830 | Msa0395970 | 0.829201 | 5.877084e-55 | -8.615850e-47 |
| Msa0197660 | Msa0395970 | 0.827896 | 1.214608e-54 | -8.615850e-47 |
| Msa0212990 | Msa0395970 | 0.810257 | 1.261261e-50 | -8.615850e-47 |
| Msa0217680 | Msa0395970 | 0.805919 | 1.058156e-49 | -8.615850e-47 |
| Msa0218270 | Msa0395970 | 0.822723 | 2.033149e-53 | -8.615850e-47 |
| Msa0220580 | Msa0395970 | 0.803351 | 3.633426e-49 | -8.615850e-47 |
| Msa0222890 | Msa0395970 | 0.800347 | 1.504284e-48 | -8.615850e-47 |
| Msa0379640 | Msa0395970 | 0.828509 | 8.642977e-55 | -8.615850e-47 |
| Msa0393080 | Msa0395970 | 0.805613 | 1.226963e-49 | -8.615850e-47 |
| Msa0395970 | Msa0399340 | 0.801718 | 7.890542e-49 | -8.615850e-47 |
| Msa0395970 | Msa0412840 | 0.814524 | 1.474736e-51 | -8.615850e-47 |
| Msa0395970 | Msa0433640 | 0.822767 | 1.986614e-53 | -8.615850e-47 |
| Msa0395970 | Msa0440750 | 0.818145 | 2.283772e-52 | -8.615850e-47 |
| Msa0395970 | Msa0452710 | 0.808982 | 2.369484e-50 | -8.615850e-47 |
| Msa0395970 | Msa0453330 | 0.803549 | 3.305358e-49 | -8.615850e-47 |
| Msa0395970 | Msa0464100 | 0.813688 | 2.255679e-51 | -8.615850e-47 |
| Msa0395970 | Msa0466390 | 0.800344 | 1.506453e-48 | -8.615850e-47 |
| Msa0395970 | Msa0477130 | -0.807978 | 3.881606e-50 | -8.615850e-47 |
| Msa0395970 | Msa0479660 | 0.810421 | 1.162346e-50 | -8.615850e-47 |
| Msa0395970 | Msa0481530 | 0.849297 | 3.538718e-60 | -8.615850e-47 |
| Msa0395970 | Msa0483850 | 0.803453 | 3.461516e-49 | -8.615850e-47 |
| Msa0395970 | Msa0484780 | 0.837336 | 5.521027e-57 | -8.615850e-47 |
| Msa0395970 | Msa0512900 | 0.822857 | 1.892122e-53 | -8.615850e-47 |
| Msa0395970 | Msa0518380 | 0.800009 | 1.762385e-48 | -8.615850e-47 |
| Msa0395970 | Msa0521540 | 0.827369 | 1.624943e-54 | -8.615850e-47 |
| Msa0395970 | Msa0529890 | 0.846998 | 1.526581e-59 | -8.615850e-47 |
| Msa0395970 | Msa0532350 | 0.803955 | 2.722441e-49 | -8.615850e-47 |
| Msa0395970 | Msa0541130 | 0.803289 | 3.742448e-49 | -8.615850e-47 |
| Msa0395970 | Msa0542090 | 0.819060 | 1.416202e-52 | -8.615850e-47 |
| Msa0395970 | Msa0542130 | 0.822732 | 2.023435e-53 | -8.615850e-47 |
| Msa0395970 | Msa0545210 | 0.810919 | 9.073722e-51 | -8.615850e-47 |
| Msa0395970 | Msa0547320 | 0.813908 | 2.017090e-51 | -8.615850e-47 |
| Msa0395970 | Msa0553460 | 0.808767 | 2.633829e-50 | -8.615850e-47 |
| Msa0395970 | Msa0558690 | 0.823849 | 1.109865e-53 | -8.615850e-47 |
| Msa0395970 | Msa0563840 | 0.842418 | 2.617876e-58 | -8.615850e-47 |
| Msa0395970 | Msa0569500 | 0.825200 | 5.335725e-54 | -8.615850e-47 |
| Msa0395970 | Msa0577500 | 0.838127 | 3.459080e-57 | -8.615850e-47 |
| Msa0395970 | Msa0585560 | 0.845632 | 3.598578e-59 | -8.615850e-47 |
| Msa0395970 | Msa0607050 | 0.841843 | 3.714826e-58 | -8.615850e-47 |
| Msa0395970 | Msa0610430 | 0.845437 | 4.063496e-59 | -8.615850e-47 |
| Msa0395970 | Msa0617640 | 0.825400 | 4.785915e-54 | -8.615850e-47 |
| Msa0395970 | Msa0625720 | 0.842151 | 3.081237e-58 | -8.615850e-47 |
| Msa0395970 | Msa0626090 | 0.803662 | 3.131997e-49 | -8.615850e-47 |
| Msa0395970 | Msa0657970 | 0.828277 | 9.830647e-55 | -8.615850e-47 |
| Msa0395970 | Msa0663390 | 0.843121 | 1.702317e-58 | -8.615850e-47 |
| Msa0395970 | Msa0663810 | 0.818512 | 1.885971e-52 | -8.615850e-47 |
| Msa0395970 | Msa0669440 | 0.826081 | 3.299738e-54 | -8.615850e-47 |
| Msa0395970 | Msa0673460 | 0.845855 | 3.130534e-59 | -8.615850e-47 |
| Msa0395970 | Msa0685140 | 0.803293 | 3.734757e-49 | -8.615850e-47 |
| Msa0395970 | Msa0689260 | 0.831264 | 1.841846e-55 | -8.615850e-47 |
| Msa0395970 | Msa0690150 | 0.825179 | 5.397607e-54 | -8.615850e-47 |
| Msa0395970 | Msa0690440 | 0.808809 | 2.580516e-50 | -8.615850e-47 |
| Msa0395970 | Msa0692360 | 0.800292 | 1.543432e-48 | -8.615850e-47 |
| Msa0395970 | Msa0692830 | 0.814397 | 1.572853e-51 | -8.615850e-47 |
| Msa0395970 | Msa0692950 | 0.831228 | 1.880447e-55 | -8.615850e-47 |
| Msa0395970 | Msa0693380 | 0.829387 | 5.295107e-55 | -8.615850e-47 |
| Msa0395970 | Msa0696640 | 0.800154 | 1.646645e-48 | -8.615850e-47 |
| Msa0395970 | Msa0697030 | 0.805127 | 1.550704e-49 | -8.615850e-47 |
| Msa0395970 | Msa0711780 | 0.846127 | 2.640329e-59 | -8.615850e-47 |
| Msa0395970 | Msa0711790 | 0.818222 | 2.193647e-52 | -8.615850e-47 |
| Msa0395970 | Msa0715700 | 0.818785 | 1.635529e-52 | -8.615850e-47 |
| Msa0395970 | Msa0717010 | 0.800498 | 1.401045e-48 | -8.615850e-47 |
| Msa0395970 | Msa0724210 | 0.803927 | 2.759718e-49 | -8.615850e-47 |
| Msa0395970 | Msa0737560 | 0.810488 | 1.124627e-50 | -8.615850e-47 |
| Msa0395970 | Msa0745790 | 0.815355 | 9.643953e-52 | -8.615850e-47 |
| Msa0395970 | Msa0762970 | 0.800079 | 1.705191e-48 | -8.615850e-47 |
| Msa0395970 | Msa0773840 | 0.813306 | 2.735723e-51 | -8.615850e-47 |
| Msa0395970 | Msa0777230 | 0.803550 | 3.305166e-49 | -8.615850e-47 |
| Msa0395970 | Msa0778520 | 0.806652 | 7.411980e-50 | -8.615850e-47 |
| Msa0395970 | Msa0790510 | 0.804742 | 1.867014e-49 | -8.615850e-47 |
| Msa0395970 | Msa0793800 | 0.801215 | 1.000197e-48 | -8.615850e-47 |
| Msa0395970 | Msa0794670 | 0.842192 | 3.003683e-58 | -8.615850e-47 |
| Msa0395970 | Msa0796700 | 0.812706 | 3.703916e-51 | -8.615850e-47 |
| Msa0395970 | Msa0816590 | 0.817998 | 2.465865e-52 | -8.615850e-47 |
| Msa0395970 | Msa0816700 | 0.825343 | 4.936450e-54 | -8.615850e-47 |
| Msa0395970 | Msa0817460 | 0.805255 | 1.458133e-49 | -8.615850e-47 |
| Msa0395970 | Msa0820840 | 0.803238 | 3.835198e-49 | -8.615850e-47 |
| Msa0395970 | Msa0820850 | 0.826494 | 2.631105e-54 | -8.615850e-47 |
| Msa0395970 | Msa0824660 | 0.805993 | 1.020499e-49 | -8.615850e-47 |
| Msa0395970 | Msa0825080 | 0.801601 | 8.336664e-49 | -8.615850e-47 |
| Msa0395970 | Msa0830530 | 0.809180 | 2.149566e-50 | -8.615850e-47 |
| Msa0395970 | Msa0830540 | 0.800140 | 1.657574e-48 | -8.615850e-47 |
| Msa0395970 | Msa0840820 | 0.804592 | 2.005789e-49 | -8.615850e-47 |
| Msa0395970 | Msa0856910 | 0.817494 | 3.203830e-52 | -8.615850e-47 |
| Msa0395970 | Msa0860410 | 0.819742 | 9.899773e-53 | -8.615850e-47 |
| Msa0395970 | Msa0861130 | 0.830095 | 3.561449e-55 | -8.615850e-47 |
| Msa0395970 | Msa0861920 | 0.808944 | 2.414017e-50 | -8.615850e-47 |
| Msa0395970 | Msa0871270 | 0.819977 | 8.745244e-53 | -8.615850e-47 |
| Msa0395970 | Msa0880140 | 0.813650 | 2.298539e-51 | -8.615850e-47 |
| Msa0395970 | Msa0906200 | 0.821333 | 4.268379e-53 | -8.615850e-47 |
| Msa0395970 | Msa0909110 | 0.807351 | 5.275055e-50 | -8.615850e-47 |
| Msa0395970 | Msa0938220 | 0.822433 | 2.375656e-53 | -8.615850e-47 |
| Msa0395970 | Msa0942070 | 0.803166 | 3.968633e-49 | -8.615850e-47 |
| Msa0395970 | Msa0945440 | 0.804082 | 2.562639e-49 | -8.615850e-47 |
| Msa0395970 | Msa0974070 | 0.805044 | 1.614202e-49 | -8.615850e-47 |
| Msa0395970 | Msa1003620 | 0.841925 | 3.535609e-58 | -8.615850e-47 |
| Msa0395970 | Msa1014540 | 0.829661 | 4.543087e-55 | -8.615850e-47 |
| Msa0395970 | Msa1021540 | 0.806795 | 6.916892e-50 | -8.615850e-47 |
| Msa0395970 | Msa1030970 | 0.833617 | 4.811703e-56 | -8.615850e-47 |
| Msa0395970 | Msa1036610 | 0.800031 | 1.744301e-48 | -8.615850e-47 |
| Msa0395970 | Msa1045200 | 0.804349 | 2.254768e-49 | -8.615850e-47 |
| Msa0395970 | Msa1046460 | 0.824227 | 9.046178e-54 | -8.615850e-47 |
| Msa0395970 | Msa1051200 | 0.809559 | 1.782734e-50 | -8.615850e-47 |
| Msa0395970 | Msa1053280 | 0.811879 | 5.612726e-51 | -8.615850e-47 |
| Msa0395970 | Msa1061680 | 0.850818 | 1.327412e-60 | -8.615850e-47 |
| Msa0395970 | Msa1070010 | 0.814045 | 1.881028e-51 | -8.615850e-47 |
| Msa0395970 | Msa1075540 | 0.854197 | 1.445328e-61 | -8.615850e-47 |
| Msa0395970 | Msa1079590 | 0.801941 | 7.098223e-49 | -8.615850e-47 |
| Msa0395970 | Msa1082500 | 0.851375 | 9.243655e-61 | -8.615850e-47 |
| Msa0395970 | Msa1085300 | 0.813936 | 1.988964e-51 | -8.615850e-47 |
| Msa0395970 | Msa1098400 | 0.805946 | 1.044377e-49 | -8.615850e-47 |
| Msa0395970 | Msa1131220 | 0.820675 | 6.051430e-53 | -8.615850e-47 |
| Msa0395970 | Msa1160590 | 0.809862 | 1.534303e-50 | -8.615850e-47 |
| Msa0395970 | Msa1162270 | 0.805621 | 1.222228e-49 | -8.615850e-47 |
| Msa0395970 | Msa1163820 | 0.801329 | 9.478422e-49 | -8.615850e-47 |
| Msa0395970 | Msa1165520 | 0.806884 | 6.622385e-50 | -8.615850e-47 |
| Msa0395970 | Msa1169090 | 0.804324 | 2.281322e-49 | -8.615850e-47 |
| Msa0395970 | Msa1172400 | 0.808000 | 3.838727e-50 | -8.615850e-47 |
| Msa0395970 | Msa1181250 | 0.811661 | 6.262271e-51 | -8.615850e-47 |
| Msa0395970 | Msa1181330 | 0.804780 | 1.833103e-49 | -8.615850e-47 |
| Msa0395970 | Msa1199220 | 0.806402 | 8.369397e-50 | -8.615850e-47 |
| Msa0395970 | Msa1204530 | 0.822910 | 1.839647e-53 | -8.615850e-47 |
| Msa0395970 | Msa1208880 | 0.820031 | 8.502691e-53 | -8.615850e-47 |
| Msa0395970 | Msa1239720 | 0.807330 | 5.328837e-50 | -8.615850e-47 |
| Msa0395970 | Msa1245930 | 0.833090 | 6.510933e-56 | -8.615850e-47 |
| Msa0395970 | Msa1253020 | 0.801270 | 9.748406e-49 | -8.615850e-47 |
| Msa0395970 | Msa1259060 | 0.812783 | 3.564048e-51 | -8.615850e-47 |
| Msa0395970 | Msa1263750 | 0.801162 | 1.025560e-48 | -8.615850e-47 |
| Msa0395970 | Msa1263790 | 0.821621 | 3.662887e-53 | -8.615850e-47 |
| Msa0395970 | Msa1267960 | 0.805950 | 1.042424e-49 | -8.615850e-47 |
| Msa0395970 | Msa1276440 | 0.802897 | 4.509936e-49 | -8.615850e-47 |
| Msa0395970 | Msa1277660 | 0.825586 | 4.322808e-54 | -8.615850e-47 |
| Msa0395970 | Msa1284680 | 0.818693 | 1.715766e-52 | -8.615850e-47 |
| Msa0395970 | Msa1287440 | 0.830956 | 2.192751e-55 | -8.615850e-47 |
| Msa0395970 | Msa1296760 | 0.801365 | 9.319357e-49 | -8.615850e-47 |
| Msa0395970 | Msa1305190 | 0.820535 | 6.514903e-53 | -8.615850e-47 |
| Msa0395970 | Msa1305340 | 0.824871 | 6.381544e-54 | -8.615850e-47 |
| Msa0395970 | Msa1306840 | 0.839491 | 1.535300e-57 | -8.615850e-47 |
| Msa0395970 | Msa1306850 | 0.805851 | 1.093162e-49 | -8.615850e-47 |
| Msa0395970 | Msa1306920 | 0.800063 | 1.717925e-48 | -8.615850e-47 |
| Msa0395970 | Msa1322890 | 0.800039 | 1.737066e-48 | -8.615850e-47 |
| Msa0395970 | Msa1330290 | 0.802155 | 6.414358e-49 | -8.615850e-47 |
| Msa0395970 | Msa1331000 | 0.841335 | 5.059370e-58 | -8.615850e-47 |
| Msa0395970 | Msa1331910 | 0.807356 | 5.262098e-50 | -8.615850e-47 |
| Msa0395970 | Msa1342900 | 0.811957 | 5.398228e-51 | -8.615850e-47 |
| Msa0395970 | Msa1343760 | 0.801103 | 1.054504e-48 | -8.615850e-47 |
| Msa0395970 | Msa1358250 | 0.831854 | 1.317945e-55 | -8.615850e-47 |
| Msa0395970 | Msa1370070 | -0.804184 | 2.439662e-49 | -8.615850e-47 |
| Msa0395970 | Msa1373030 | 0.826970 | 2.024605e-54 | -8.615850e-47 |
| Msa0395970 | Msa1386780 | 0.810079 | 1.377906e-50 | -8.615850e-47 |
| Msa0395970 | Msa1392260 | 0.817167 | 3.793906e-52 | -8.615850e-47 |
| Msa0395970 | Msa1392780 | 0.827390 | 1.606839e-54 | -8.615850e-47 |
| Msa0395970 | Msa1395660 | 0.801221 | 9.975213e-49 | -8.615850e-47 |
| Msa0395970 | Msa1400580 | 0.800361 | 1.494050e-48 | -8.615850e-47 |
| Msa0395970 | Msa1401530 | 0.804863 | 1.761539e-49 | -8.615850e-47 |
| Msa0395970 | Msa1403340 | 0.813177 | 2.921000e-51 | -8.615850e-47 |
| Msa0395970 | Msa1412530 | 0.800368 | 1.489574e-48 | -8.615850e-47 |
| Msa0395970 | Msa1424450 | 0.812188 | 4.806488e-51 | -8.615850e-47 |
| Msa0395970 | Msa1429900 | 0.823443 | 1.381629e-53 | -8.615850e-47 |
| Msa0395970 | Msa1430680 | 0.815761 | 7.834135e-52 | -8.615850e-47 |
| Msa0395970 | Msa1440000 | 0.807195 | 5.690165e-50 | -8.615850e-47 |
| Msa0395970 | Msa1454480 | 0.815219 | 1.033891e-51 | -8.615850e-47 |
| Msa0395970 | Msa1457920 | 0.804999 | 1.649187e-49 | -8.615850e-47 |
| Msa0395970 | Msa1460050 | 0.807335 | 5.314115e-50 | -8.615850e-47 |
| Msa0395970 | Msa1463670 | 0.801038 | 1.087140e-48 | -8.615850e-47 |
| Msa0395970 | Msa1464900 | 0.811313 | 7.454050e-51 | -8.615850e-47 |
| Msa0395970 | Msa1466540 | 0.821504 | 3.899148e-53 | -8.615850e-47 |
| Msa0239800 | Msa0395970 | 0.829571 | 4.777126e-55 | -8.615850e-47 |
| Msa0241470 | Msa0395970 | 0.825342 | 4.939298e-54 | -8.615850e-47 |
| Msa0242430 | Msa0395970 | 0.813769 | 2.163970e-51 | -8.615850e-47 |
| Msa0260680 | Msa0395970 | 0.804143 | 2.488707e-49 | -8.615850e-47 |
| Msa0270100 | Msa0395970 | 0.800407 | 1.462621e-48 | -8.615850e-47 |
| Msa0271490 | Msa0395970 | 0.806669 | 7.354014e-50 | -8.615850e-47 |
| Msa0271530 | Msa0395970 | 0.822159 | 2.750381e-53 | -8.615850e-47 |
| Msa0277820 | Msa0395970 | 0.803725 | 3.040147e-49 | -8.615850e-47 |
| Msa0279220 | Msa0395970 | 0.844130 | 9.149280e-59 | -8.615850e-47 |
| Msa0279240 | Msa0395970 | 0.834240 | 3.359999e-56 | -8.615850e-47 |
| Msa0280090 | Msa0395970 | 0.804418 | 2.180914e-49 | -8.615850e-47 |
| Msa0282390 | Msa0395970 | 0.808390 | 3.171621e-50 | -8.615850e-47 |
| Msa0285450 | Msa0395970 | 0.807701 | 4.445516e-50 | -8.615850e-47 |
| Msa0287410 | Msa0395970 | 0.800748 | 1.245936e-48 | -8.615850e-47 |
| Msa0288100 | Msa0395970 | 0.804686 | 1.917390e-49 | -8.615850e-47 |
| Msa0309750 | Msa0395970 | 0.820079 | 8.290134e-53 | -8.615850e-47 |
| Msa0309770 | Msa0395970 | 0.844700 | 6.425229e-59 | -8.615850e-47 |
| Msa0317510 | Msa0395970 | 0.826358 | 2.833972e-54 | -8.615850e-47 |
| Msa0318980 | Msa0395970 | 0.840417 | 8.804480e-58 | -8.615850e-47 |
| Msa0320120 | Msa0395970 | 0.802625 | 5.132694e-49 | -8.615850e-47 |
| Msa0326520 | Msa0395970 | 0.809938 | 1.477594e-50 | -8.615850e-47 |
| Msa0330340 | Msa0395970 | 0.801658 | 8.114073e-49 | -8.615850e-47 |
| Msa0336420 | Msa0395970 | 0.800553 | 1.365563e-48 | -8.615850e-47 |
| Msa0337620 | Msa0395970 | 0.805922 | 1.056544e-49 | -8.615850e-47 |
| Msa0345970 | Msa0395970 | 0.831632 | 1.495103e-55 | -8.615850e-47 |
| Msa0351380 | Msa0395970 | 0.800803 | 1.214050e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0395970 | MtrunA17_Chr3g0082161 | 92.734 | 289 | 7 | 1 | 89 | 377 | 10 | 284 | 0.0 | 544 |
| Msa0395970 | MtrunA17_Chr1g0164511 | 92.042 | 289 | 9 | 1 | 89 | 377 | 10 | 284 | 0.0 | 541 |
| Msa0395970 | MtrunA17_Chr1g0164501 | 90.558 | 233 | 8 | 1 | 145 | 377 | 1 | 219 | 1.13e-152 | 429 |
| Msa0395970 | MtrunA17_Chr8g0353321 | 63.309 | 278 | 87 | 2 | 88 | 365 | 36 | 298 | 1.58e-127 | 369 |
| Msa0395970 | MtrunA17_Chr3g0082151 | 78.333 | 60 | 9 | 2 | 46 | 104 | 1 | 57 | 4.08e-22 | 89.0 |
| Msa0395970 | MtrunA17_Chr1g0164521 | 78.333 | 60 | 9 | 2 | 46 | 104 | 1 | 57 | 4.08e-22 | 89.0 |
| Msa0395970 | MtrunA17_Chr2g0277381 | 25.874 | 286 | 170 | 10 | 92 | 370 | 77 | 327 | 2.15e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0395970 | AT1G72050.2 | 51.807 | 415 | 133 | 4 | 2 | 364 | 3 | 402 | 3.16e-143 | 413 |
| Msa0395970 | AT1G72050.3 | 51.807 | 415 | 133 | 4 | 2 | 364 | 18 | 417 | 5.90e-143 | 412 |
| Msa0395970 | AT1G72050.1 | 51.829 | 328 | 92 | 3 | 88 | 364 | 2 | 314 | 2.81e-113 | 333 |
| Msa0395970 | AT1G72050.4 | 49.310 | 290 | 82 | 2 | 88 | 326 | 2 | 277 | 1.30e-93 | 283 |
Find 91 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCTAATATCTCTGAATTT+TGG | 0.068375 | 3_2:+13392156 | None:intergenic |
| AATTGATGTGGGATGTAATT+AGG | 0.159176 | 3_2:+13392091 | None:intergenic |
| AGGATTTAACATGAGCTTTA+AGG | 0.225594 | 3_2:+13390343 | None:intergenic |
| ACCTTTCCACAGCCAATTTC+AGG | 0.226103 | 3_2:+13390609 | None:intergenic |
| TTCAAACCAGCCTCTGATTC+AGG | 0.234528 | 3_2:+13391630 | None:intergenic |
| ATTGATGTGGGATGTAATTA+GGG | 0.319248 | 3_2:+13392092 | None:intergenic |
| AAGAAGCTGATGAAGAATTC+AGG | 0.351513 | 3_2:-13389839 | Msa0395970:CDS |
| ATTCTTCCATTGTTGATAGA+AGG | 0.352159 | 3_2:+13392199 | None:intergenic |
| GCAAACCTCATTCCACAATT+AGG | 0.364679 | 3_2:+13390011 | None:intergenic |
| AAATTCACATTTAAATGCTT+CGG | 0.389923 | 3_2:+13390227 | None:intergenic |
| GAGTGAGGCAGGAGGCTACT+AGG | 0.391718 | 3_2:+13392278 | None:intergenic |
| CAGTTTGTATGTCCTGAAAT+TGG | 0.397925 | 3_2:-13390621 | Msa0395970:CDS |
| AAAACCTTCATTCTGCAGTT+AGG | 0.415178 | 3_2:-13390431 | Msa0395970:CDS |
| ATCTACAGATACCGCAGAAT+TGG | 0.415201 | 3_2:+13392124 | None:intergenic |
| TCGATCCTTCCAGTGTTTGT+AGG | 0.422844 | 3_2:+13392245 | None:intergenic |
| AGAGAACTTGTTATTTGTGC+AGG | 0.423861 | 3_2:-13389730 | Msa0395970:CDS |
| AGTAAGATGGATCATACTAT+AGG | 0.427777 | 3_2:-13389701 | Msa0395970:exon |
| TTTCTCTTCACCCCTCCCCT+TGG | 0.432023 | 3_2:+13389810 | None:intergenic |
| ACAATACAATCGATCAAAAC+AGG | 0.447671 | 3_2:+13389660 | None:intergenic |
| AAATGCTTCGGAGGAACTGC+TGG | 0.448941 | 3_2:+13390239 | None:intergenic |
| GGAATTGTTGTGAAAATTGA+GGG | 0.450105 | 3_2:+13392220 | None:intergenic |
| CCTATTGAGGATTGCAAAAG+TGG | 0.453395 | 3_2:-13390732 | Msa0395970:CDS |
| AGCATTTAAATGTGAATTTG+AGG | 0.455222 | 3_2:-13390223 | Msa0395970:CDS |
| CCACAGTAGAAATGTTGGTT+AGG | 0.461532 | 3_2:-13389779 | Msa0395970:CDS |
| ATGTAGCCTTGAAGATTGTA+AGG | 0.466096 | 3_2:-13390823 | Msa0395970:CDS |
| GTGTGTGGGTTTCCTAATTG+TGG | 0.466837 | 3_2:-13390023 | Msa0395970:CDS |
| GTGCAGGATTGTCAGTAAGA+TGG | 0.471789 | 3_2:-13389714 | Msa0395970:exon |
| CGGCTTTACTTGAAAGTGTA+CGG | 0.472717 | 3_2:+13390049 | None:intergenic |
| CGAGCCTAACTGCAGAATGA+AGG | 0.478367 | 3_2:+13390427 | None:intergenic |
| ATGTGAACTGTGACACTTGT+GGG | 0.479574 | 3_2:-13390311 | Msa0395970:CDS |
| GCAGAATGAATGAGTGAGGC+AGG | 0.482188 | 3_2:+13392267 | None:intergenic |
| AGGAATTGTTGTGAAAATTG+AGG | 0.487217 | 3_2:+13392219 | None:intergenic |
| CAAGTAAAGCCGTTTGTGTG+TGG | 0.487892 | 3_2:-13390038 | Msa0395970:CDS |
| CAGGTCAAGGCCAAGGGGAG+GGG | 0.490449 | 3_2:-13389820 | Msa0395970:CDS |
| AGCTCGCCTTACAATCTTCA+AGG | 0.496505 | 3_2:+13390817 | None:intergenic |
| GGAGAAAGCAAGAGTTGAAA+CGG | 0.508173 | 3_2:-13391655 | Msa0395970:CDS |
| GCATTTAAATGTGAATTTGA+GGG | 0.510756 | 3_2:-13390222 | Msa0395970:CDS |
| TGTCACAGTTCACATATTGA+TGG | 0.511542 | 3_2:+13390319 | None:intergenic |
| TCAGGTCAAGGCCAAGGGGA+GGG | 0.518065 | 3_2:-13389821 | Msa0395970:CDS |
| TTCATTCTGCCTACAAACAC+TGG | 0.520115 | 3_2:-13392254 | Msa0395970:five_prime_UTR |
| TCTTCAAGGCTACATACAAA+TGG | 0.524961 | 3_2:+13390831 | None:intergenic |
| AACATGAGCTTTAAGGCACT+CGG | 0.529952 | 3_2:+13390350 | None:intergenic |
| AAGTAAAGCCGTTTGTGTGT+GGG | 0.534040 | 3_2:-13390037 | Msa0395970:CDS |
| AGTGAGGCAGGAGGCTACTA+GGG | 0.539904 | 3_2:+13392279 | None:intergenic |
| ACAGTTCACATATTGATGGC+AGG | 0.543929 | 3_2:+13390323 | None:intergenic |
| AAGAATTCAGGTCAAGGCCA+AGG | 0.544513 | 3_2:-13389827 | Msa0395970:CDS |
| TCCTCCCACAGTAGAAATGT+TGG | 0.546096 | 3_2:-13389784 | Msa0395970:CDS |
| GTATGTCCTGAAATTGGCTG+TGG | 0.551180 | 3_2:-13390615 | Msa0395970:CDS |
| TTCACATTTAAATGCTTCGG+AGG | 0.553444 | 3_2:+13390230 | None:intergenic |
| GGTTTCCTAATTGTGGAATG+AGG | 0.556382 | 3_2:-13390016 | Msa0395970:CDS |
| CGTCACCTTCTACAACATCA+AGG | 0.557665 | 3_2:-13390771 | Msa0395970:CDS |
| TTAGGAAACCCACACACAAA+CGG | 0.558755 | 3_2:+13390029 | None:intergenic |
| AGTTCTCTAATTGACTAGGT+GGG | 0.566365 | 3_2:+13389745 | None:intergenic |
| GAACAAATACCTCAAGGGAA+TGG | 0.572995 | 3_2:+13391538 | None:intergenic |
| ACGGAACCTGAATCAGAGGC+TGG | 0.573226 | 3_2:-13391636 | Msa0395970:CDS |
| ACTATAGGCTAAAAGTTATG+TGG | 0.575229 | 3_2:-13389686 | Msa0395970:three_prime_UTR |
| AAATTTATAGTCATGAATGA+TGG | 0.575901 | 3_2:-13389584 | Msa0395970:three_prime_UTR |
| CCACATCAATTCTGAACACA+AGG | 0.577487 | 3_2:-13392079 | Msa0395970:intron |
| CTAACCAACATTTCTACTGT+GGG | 0.578652 | 3_2:+13389780 | None:intergenic |
| CGCTATTACTGCCAATTCTG+CGG | 0.581521 | 3_2:-13392135 | Msa0395970:CDS |
| TTCAGGTCAAGGCCAAGGGG+AGG | 0.583372 | 3_2:-13389822 | Msa0395970:CDS |
| AAGTTCTCTAATTGACTAGG+TGG | 0.584481 | 3_2:+13389744 | None:intergenic |
| TAATTGAACAAATACCTCAA+GGG | 0.585198 | 3_2:+13391533 | None:intergenic |
| AGAATTCAGGTCAAGGCCAA+GGG | 0.585579 | 3_2:-13389826 | Msa0395970:CDS |
| GAAGTGGTGTGCTTAGAGCC+TGG | 0.587135 | 3_2:-13390396 | Msa0395970:CDS |
| CCTAACCAACATTTCTACTG+TGG | 0.587482 | 3_2:+13389779 | None:intergenic |
| AACTGCTGGCTTCATGTGTG+CGG | 0.588715 | 3_2:+13390253 | None:intergenic |
| TAAGGCGAGCTACAGAAGAA+AGG | 0.590587 | 3_2:-13390805 | Msa0395970:CDS |
| ACAATTCCTTCTATCAACAA+TGG | 0.591925 | 3_2:-13392205 | Msa0395970:exon |
| CAGAAGCATGAAGATTCTCA+TGG | 0.597767 | 3_2:-13390564 | Msa0395970:CDS |
| CCTTGTGTTCAGAATTGATG+TGG | 0.601822 | 3_2:+13392079 | None:intergenic |
| AACTGAAGAAGAATATGAAG+AGG | 0.602793 | 3_2:-13390281 | Msa0395970:CDS |
| TTTGAAAGCTAATACTTGTG+AGG | 0.603167 | 3_2:-13391613 | Msa0395970:CDS |
| TTCTGCCTACAAACACTGGA+AGG | 0.607016 | 3_2:-13392250 | Msa0395970:five_prime_UTR |
| TCCTGAAATTGGCTGTGGAA+AGG | 0.608455 | 3_2:-13390610 | Msa0395970:CDS |
| GTTCTCTAATTGACTAGGTG+GGG | 0.608887 | 3_2:+13389746 | None:intergenic |
| GTCACCTTCTACAACATCAA+GGG | 0.613362 | 3_2:-13390770 | Msa0395970:CDS |
| AGTTCTACCCCTCCGCGTAG+TGG | 0.624555 | 3_2:-13390657 | Msa0395970:CDS |
| ACCAACATTTCTACTGTGGG+AGG | 0.630135 | 3_2:+13389783 | None:intergenic |
| TAGGCTCGAAACAATTGAAG+TGG | 0.632928 | 3_2:-13390412 | Msa0395970:CDS |
| CTGATGAAGAATTCAGGTCA+AGG | 0.636136 | 3_2:-13389833 | Msa0395970:CDS |
| TGAAACGGAACCTGAATCAG+AGG | 0.646705 | 3_2:-13391640 | Msa0395970:CDS |
| CTTGTGTTCAGAATTGATGT+GGG | 0.647147 | 3_2:+13392080 | None:intergenic |
| AACAAGTTCTCTAATTGACT+AGG | 0.649660 | 3_2:+13389741 | None:intergenic |
| GAATTGTTGTGAAAATTGAG+GGG | 0.663373 | 3_2:+13392221 | None:intergenic |
| TATGCAAAGCCATTCCCTTG+AGG | 0.666726 | 3_2:-13391547 | Msa0395970:intron |
| GCTAATACTTGTGAGGAATG+TGG | 0.673142 | 3_2:-13391606 | Msa0395970:CDS |
| GTAGGCAGAATGAATGAGTG+AGG | 0.676225 | 3_2:+13392263 | None:intergenic |
| GAATGAATGAGTGAGGCAGG+AGG | 0.692760 | 3_2:+13392270 | None:intergenic |
| GAATTCAGGTCAAGGCCAAG+GGG | 0.693128 | 3_2:-13389825 | Msa0395970:CDS |
| TATGTGAACTGTGACACTTG+TGG | 0.719735 | 3_2:-13390312 | Msa0395970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAATTACTAATTGTTT+AGG | - | chr3_2:13390032-13390051 | Msa0395970:CDS | 10.0% |
| !!! | ATTTTTTTTATGTCAATTTT+AGG | - | chr3_2:13390156-13390175 | Msa0395970:intron | 10.0% |
| !! | AATGATCTATAAAATTATTA+TGG | - | chr3_2:13390719-13390738 | Msa0395970:CDS | 10.0% |
| !! | TAAAAAATGTAACAAAAATT+TGG | + | chr3_2:13391716-13391735 | None:intergenic | 10.0% |
| !!! | TGTAGAAATTTTATATATTT+AGG | - | chr3_2:13392203-13392222 | Msa0395970:exon | 10.0% |
| !!! | ATTTTATATATTTAGGAATT+AGG | - | chr3_2:13392210-13392229 | Msa0395970:five_prime_UTR | 10.0% |
| !!! | CTTTTTTTTATATATAAATG+AGG | - | chr3_2:13392281-13392300 | Msa0395970:five_prime_UTR | 10.0% |
| !!! | AGTTTTAGTTTTATGAATTT+AGG | - | chr3_2:13390006-13390025 | Msa0395970:CDS | 15.0% |
| !!! | GTTTTAGTTTTATGAATTTA+GGG | - | chr3_2:13390007-13390026 | Msa0395970:CDS | 15.0% |
| !!! | TTGTTGTAAATATTTGTTAT+TGG | - | chr3_2:13390473-13390492 | Msa0395970:intron | 15.0% |
| !! | TCAAGATTTACTTTATATAT+AGG | - | chr3_2:13391970-13391989 | Msa0395970:intron | 15.0% |
| !! | CAAGATTTACTTTATATATA+GGG | - | chr3_2:13391971-13391990 | Msa0395970:intron | 15.0% |
| !!! | GATCTATAGTTTTAACTAAA+TGG | - | chr3_2:13389812-13389831 | Msa0395970:CDS | 20.0% |
| !!! | ACTCAAAATTTGTTCATTTT+CGG | + | chr3_2:13389853-13389872 | None:intergenic | 20.0% |
| !!! | ATGAACAAATTTTGAGTATT+AGG | - | chr3_2:13389856-13389875 | Msa0395970:intron | 20.0% |
| !!! | TGAACAAATTTTGAGTATTA+GGG | - | chr3_2:13389857-13389876 | Msa0395970:intron | 20.0% |
| !!! | TTTTTTATGTCAATTTTAGG+AGG | - | chr3_2:13390159-13390178 | Msa0395970:intron | 20.0% |
| !! | AAATTCACATTTAAATGCTT+CGG | + | chr3_2:13391617-13391636 | None:intergenic | 20.0% |
| !! | AAATTTATAGTCATGAATGA+TGG | - | chr3_2:13392257-13392276 | Msa0395970:five_prime_UTR | 20.0% |
| !! | GTCTAATATCTCTGAATTTT+GGG | + | chr3_2:13389687-13389706 | None:intergenic | 25.0% |
| !!! | TATTAGGGTTTTGTTTGTTA+AGG | - | chr3_2:13389872-13389891 | Msa0395970:intron | 25.0% |
| ! | GAAGAAAAGCAAAACAATTA+GGG | + | chr3_2:13389916-13389935 | None:intergenic | 25.0% |
| ! | TGAAGAAAAGCAAAACAATT+AGG | + | chr3_2:13389917-13389936 | None:intergenic | 25.0% |
| ! | TTATGCAATTATAGCTTCTA+TGG | - | chr3_2:13390085-13390104 | Msa0395970:intron | 25.0% |
| ! | TAATTGAACAAATACCTCAA+GGG | + | chr3_2:13390311-13390330 | None:intergenic | 25.0% |
| ! | ATAATTGAACAAATACCTCA+AGG | + | chr3_2:13390312-13390331 | None:intergenic | 25.0% |
| ! | GTTCAATTATAAACATCACA+TGG | - | chr3_2:13390322-13390341 | Msa0395970:CDS | 25.0% |
| ! | TTGTGTATAATTGTTTAACG+TGG | - | chr3_2:13390402-13390421 | Msa0395970:CDS | 25.0% |
| !! | CACTTGTTAATTTATTCATG+AGG | - | chr3_2:13390542-13390561 | Msa0395970:intron | 25.0% |
| !! | AACTTTTAAATGTCCTATTG+AGG | - | chr3_2:13391096-13391115 | Msa0395970:intron | 25.0% |
| ! | TATTAGCAAAATCGAAAGAA+AGG | + | chr3_2:13391310-13391329 | None:intergenic | 25.0% |
| ! | AGCATTTAAATGTGAATTTG+AGG | - | chr3_2:13391618-13391637 | Msa0395970:CDS | 25.0% |
| ! | GCATTTAAATGTGAATTTGA+GGG | - | chr3_2:13391619-13391638 | Msa0395970:CDS | 25.0% |
| !!! | CATTTTTTAACTTCCAAATG+TGG | - | chr3_2:13391727-13391746 | Msa0395970:intron | 25.0% |
| GAATTGTTGTGAAAATTGAG+GGG | + | chr3_2:13389623-13389642 | None:intergenic | 30.0% | |
| GGAATTGTTGTGAAAATTGA+GGG | + | chr3_2:13389624-13389643 | None:intergenic | 30.0% | |
| AGGAATTGTTGTGAAAATTG+AGG | + | chr3_2:13389625-13389644 | None:intergenic | 30.0% | |
| ACAATTCCTTCTATCAACAA+TGG | - | chr3_2:13389636-13389655 | Msa0395970:three_prime_UTR | 30.0% | |
| ! | ATTCTTCCATTGTTGATAGA+AGG | + | chr3_2:13389645-13389664 | None:intergenic | 30.0% |
| !!! | TTTTGGGATTTCATCGTTTT+GGG | + | chr3_2:13389671-13389690 | None:intergenic | 30.0% |
| !!! | ATTTTGGGATTTCATCGTTT+TGG | + | chr3_2:13389672-13389691 | None:intergenic | 30.0% |
| ! | CGTCTAATATCTCTGAATTT+TGG | + | chr3_2:13389688-13389707 | None:intergenic | 30.0% |
| !!! | GGATGTAATTAGGGTTTTTT+TGG | + | chr3_2:13389743-13389762 | None:intergenic | 30.0% |
| ATTGATGTGGGATGTAATTA+GGG | + | chr3_2:13389752-13389771 | None:intergenic | 30.0% | |
| AATTGATGTGGGATGTAATT+AGG | + | chr3_2:13389753-13389772 | None:intergenic | 30.0% | |
| !! | TTTCTACAGTTTTAACCCAA+TGG | - | chr3_2:13389949-13389968 | Msa0395970:intron | 30.0% |
| !! | TTCTACAGTTTTAACCCAAT+GGG | - | chr3_2:13389950-13389969 | Msa0395970:intron | 30.0% |
| AAGAAATTGAGTAACCCATT+GGG | + | chr3_2:13389967-13389986 | None:intergenic | 30.0% | |
| TAAGAAATTGAGTAACCCAT+TGG | + | chr3_2:13389968-13389987 | None:intergenic | 30.0% | |
| TATGTGTGATTGATTGTGTA+TGG | - | chr3_2:13390113-13390132 | Msa0395970:intron | 30.0% | |
| TTTGAAAGCTAATACTTGTG+AGG | - | chr3_2:13390228-13390247 | Msa0395970:CDS | 30.0% | |
| ! | ATGGTTCTATAAACATCACA+TGG | - | chr3_2:13390341-13390360 | Msa0395970:CDS | 30.0% |
| ! | ACATCGTTTGATAGTTTGTA+TGG | - | chr3_2:13390570-13390589 | Msa0395970:CDS | 30.0% |
| ! | GATATGCATGTTTCTATGTT+TGG | - | chr3_2:13390607-13390626 | Msa0395970:CDS | 30.0% |
| ! | TCACTCATTCATACTTTTCA+AGG | + | chr3_2:13390653-13390672 | None:intergenic | 30.0% |
| ! | ACATTATAGTGTGAAAGCAT+TGG | - | chr3_2:13390742-13390761 | Msa0395970:CDS | 30.0% |
| !! | TTTCTTGTGATTTGTTACAG+AGG | - | chr3_2:13390987-13391006 | Msa0395970:intron | 30.0% |
| AGGATTTAACATGAGCTTTA+AGG | + | chr3_2:13391501-13391520 | None:intergenic | 30.0% | |
| AACTGAAGAAGAATATGAAG+AGG | - | chr3_2:13391560-13391579 | Msa0395970:CDS | 30.0% | |
| TTACACCACAAGAATAAACA+AGG | + | chr3_2:13391924-13391943 | None:intergenic | 30.0% | |
| AACAAGTTCTCTAATTGACT+AGG | + | chr3_2:13392103-13392122 | None:intergenic | 30.0% | |
| AGTAAGATGGATCATACTAT+AGG | - | chr3_2:13392140-13392159 | Msa0395970:CDS | 30.0% | |
| ACTATAGGCTAAAAGTTATG+TGG | - | chr3_2:13392155-13392174 | Msa0395970:CDS | 30.0% | |
| ACAATACAATCGATCAAAAC+AGG | + | chr3_2:13392184-13392203 | None:intergenic | 30.0% | |
| CTTGTGTTCAGAATTGATGT+GGG | + | chr3_2:13389764-13389783 | None:intergenic | 35.0% | |
| !! | ATGTCAATTTTAGGAGGAGA+TGG | - | chr3_2:13390165-13390184 | Msa0395970:intron | 35.0% |
| ! | CATGTTTCTATGTTTGGTGA+TGG | - | chr3_2:13390613-13390632 | Msa0395970:CDS | 35.0% |
| !! | CTGAAGATACATGTTTTTGC+AGG | - | chr3_2:13390674-13390693 | Msa0395970:CDS | 35.0% |
| CATATTGGAGTTCTTTGTCT+GGG | + | chr3_2:13390770-13390789 | None:intergenic | 35.0% | |
| AACCTGATACTATTTCACCA+AGG | + | chr3_2:13390812-13390831 | None:intergenic | 35.0% | |
| TTGGTGAAATAGTATCAGGT+TGG | - | chr3_2:13390811-13390830 | Msa0395970:CDS | 35.0% | |
| TGGTGAAATAGTATCAGGTT+GGG | - | chr3_2:13390812-13390831 | Msa0395970:CDS | 35.0% | |
| TCTTCAAGGCTACATACAAA+TGG | + | chr3_2:13391013-13391032 | None:intergenic | 35.0% | |
| ! | ATGTAGCCTTGAAGATTGTA+AGG | - | chr3_2:13391018-13391037 | Msa0395970:intron | 35.0% |
| ! | TTTTCCCTTGATGTTGTAGA+AGG | + | chr3_2:13391078-13391097 | None:intergenic | 35.0% |
| CAGTTTGTATGTCCTGAAAT+TGG | - | chr3_2:13391220-13391239 | Msa0395970:intron | 35.0% | |
| AACAAACTGCAAACAGTTGA+TGG | + | chr3_2:13391349-13391368 | None:intergenic | 35.0% | |
| AAAACCTTCATTCTGCAGTT+AGG | - | chr3_2:13391410-13391429 | Msa0395970:intron | 35.0% | |
| GTGAAAAATTTCATGCAACC+AGG | + | chr3_2:13391466-13391485 | None:intergenic | 35.0% | |
| TGTCACAGTTCACATATTGA+TGG | + | chr3_2:13391525-13391544 | None:intergenic | 35.0% | |
| TTCACATTTAAATGCTTCGG+AGG | + | chr3_2:13391614-13391633 | None:intergenic | 35.0% | |
| TGTTGAAGCAAATCCACATT+TGG | + | chr3_2:13391743-13391762 | None:intergenic | 35.0% | |
| ACCACAAGAATAAACAAGGA+CGG | + | chr3_2:13391920-13391939 | None:intergenic | 35.0% | |
| AAGAAGCTGATGAAGAATTC+AGG | - | chr3_2:13392002-13392021 | Msa0395970:intron | 35.0% | |
| CTAACCAACATTTCTACTGT+GGG | + | chr3_2:13392064-13392083 | None:intergenic | 35.0% | |
| AGTTCTCTAATTGACTAGGT+GGG | + | chr3_2:13392099-13392118 | None:intergenic | 35.0% | |
| AAGTTCTCTAATTGACTAGG+TGG | + | chr3_2:13392100-13392119 | None:intergenic | 35.0% | |
| !! | AGAGAACTTGTTATTTGTGC+AGG | - | chr3_2:13392111-13392130 | Msa0395970:CDS | 35.0% |
| TTCATTCTGCCTACAAACAC+TGG | - | chr3_2:13389587-13389606 | Msa0395970:three_prime_UTR | 40.0% | |
| ATCTACAGATACCGCAGAAT+TGG | + | chr3_2:13389720-13389739 | None:intergenic | 40.0% | |
| CCTTGTGTTCAGAATTGATG+TGG | + | chr3_2:13389765-13389784 | None:intergenic | 40.0% | |
| CCACATCAATTCTGAACACA+AGG | - | chr3_2:13389762-13389781 | Msa0395970:CDS | 40.0% | |
| GGAGAAAGCAAGAGTTGAAA+CGG | - | chr3_2:13390186-13390205 | Msa0395970:intron | 40.0% | |
| GCTAATACTTGTGAGGAATG+TGG | - | chr3_2:13390235-13390254 | Msa0395970:CDS | 40.0% | |
| GAACAAATACCTCAAGGGAA+TGG | + | chr3_2:13390306-13390325 | None:intergenic | 40.0% | |
| GCATATTGGAGTTCTTTGTC+TGG | + | chr3_2:13390771-13390790 | None:intergenic | 40.0% | |
| AATCCTTGATGAAGCTTCTC+AGG | + | chr3_2:13390844-13390863 | None:intergenic | 40.0% | |
| ! | CTTCATCAAGGATTTTGCCT+CGG | - | chr3_2:13390850-13390869 | Msa0395970:intron | 40.0% |
| GTCACCTTCTACAACATCAA+GGG | - | chr3_2:13391071-13391090 | Msa0395970:intron | 40.0% | |
| !! | CCACTTTTGCAATCCTCAAT+AGG | + | chr3_2:13391112-13391131 | None:intergenic | 40.0% |
| CCTATTGAGGATTGCAAAAG+TGG | - | chr3_2:13391109-13391128 | Msa0395970:intron | 40.0% | |
| ! | TTCTGATTTTCACCACTACG+CGG | + | chr3_2:13391199-13391218 | None:intergenic | 40.0% |
| ! | CAGAAGCATGAAGATTCTCA+TGG | - | chr3_2:13391277-13391296 | Msa0395970:intron | 40.0% |
| TAGGCTCGAAACAATTGAAG+TGG | - | chr3_2:13391429-13391448 | Msa0395970:intron | 40.0% | |
| !! | AACATGAGCTTTAAGGCACT+CGG | + | chr3_2:13391494-13391513 | None:intergenic | 40.0% |
| ! | ACAGTTCACATATTGATGGC+AGG | + | chr3_2:13391521-13391540 | None:intergenic | 40.0% |
| TATGTGAACTGTGACACTTG+TGG | - | chr3_2:13391529-13391548 | Msa0395970:intron | 40.0% | |
| ATGTGAACTGTGACACTTGT+GGG | - | chr3_2:13391530-13391549 | Msa0395970:intron | 40.0% | |
| ATGCAATGCTAGTATGATGG+AGG | + | chr3_2:13391678-13391697 | None:intergenic | 40.0% | |
| CGTATGCAATGCTAGTATGA+TGG | + | chr3_2:13391681-13391700 | None:intergenic | 40.0% | |
| ! | CGGCTTTACTTGAAAGTGTA+CGG | + | chr3_2:13391795-13391814 | None:intergenic | 40.0% |
| AAGTAAAGCCGTTTGTGTGT+GGG | - | chr3_2:13391804-13391823 | Msa0395970:intron | 40.0% | |
| TTAGGAAACCCACACACAAA+CGG | + | chr3_2:13391815-13391834 | None:intergenic | 40.0% | |
| GGTTTCCTAATTGTGGAATG+AGG | - | chr3_2:13391825-13391844 | Msa0395970:intron | 40.0% | |
| GCAAACCTCATTCCACAATT+AGG | + | chr3_2:13391833-13391852 | None:intergenic | 40.0% | |
| ! | TCCGTCCTTGTTTATTCTTG+TGG | - | chr3_2:13391916-13391935 | Msa0395970:intron | 40.0% |
| CTGATGAAGAATTCAGGTCA+AGG | - | chr3_2:13392008-13392027 | Msa0395970:intron | 40.0% | |
| CCTAACCAACATTTCTACTG+TGG | + | chr3_2:13392065-13392084 | None:intergenic | 40.0% | |
| ! | CCACAGTAGAAATGTTGGTT+AGG | - | chr3_2:13392062-13392081 | Msa0395970:intron | 40.0% |
| GTTCTCTAATTGACTAGGTG+GGG | + | chr3_2:13392098-13392117 | None:intergenic | 40.0% | |
| GTAGGCAGAATGAATGAGTG+AGG | + | chr3_2:13389581-13389600 | None:intergenic | 45.0% | |
| TTCTGCCTACAAACACTGGA+AGG | - | chr3_2:13389591-13389610 | Msa0395970:three_prime_UTR | 45.0% | |
| TCGATCCTTCCAGTGTTTGT+AGG | + | chr3_2:13389599-13389618 | None:intergenic | 45.0% | |
| CGCTATTACTGCCAATTCTG+CGG | - | chr3_2:13389706-13389725 | Msa0395970:exon | 45.0% | |
| TGAAACGGAACCTGAATCAG+AGG | - | chr3_2:13390201-13390220 | Msa0395970:CDS | 45.0% | |
| TTCAAACCAGCCTCTGATTC+AGG | + | chr3_2:13390214-13390233 | None:intergenic | 45.0% | |
| TATGCAAAGCCATTCCCTTG+AGG | - | chr3_2:13390294-13390313 | Msa0395970:CDS | 45.0% | |
| AAAGAACTCCAATATGCGCG+AGG | - | chr3_2:13390774-13390793 | Msa0395970:CDS | 45.0% | |
| GGCCTTGGTGAAATAGTATC+AGG | - | chr3_2:13390807-13390826 | Msa0395970:CDS | 45.0% | |
| ! | TTTTGAATTGAGCGTGACCG+AGG | + | chr3_2:13390870-13390889 | None:intergenic | 45.0% |
| GTCACGCTCAATTCAAAACG+AGG | - | chr3_2:13390872-13390891 | Msa0395970:intron | 45.0% | |
| AGCTCGCCTTACAATCTTCA+AGG | + | chr3_2:13391027-13391046 | None:intergenic | 45.0% | |
| TAAGGCGAGCTACAGAAGAA+AGG | - | chr3_2:13391036-13391055 | Msa0395970:intron | 45.0% | |
| CGTCACCTTCTACAACATCA+AGG | - | chr3_2:13391070-13391089 | Msa0395970:intron | 45.0% | |
| GTATGTCCTGAAATTGGCTG+TGG | - | chr3_2:13391226-13391245 | Msa0395970:intron | 45.0% | |
| TCCTGAAATTGGCTGTGGAA+AGG | - | chr3_2:13391231-13391250 | Msa0395970:intron | 45.0% | |
| ACCTTTCCACAGCCAATTTC+AGG | + | chr3_2:13391235-13391254 | None:intergenic | 45.0% | |
| ! | CAATGCTAGTATGATGGAGG+AGG | + | chr3_2:13391675-13391694 | None:intergenic | 45.0% |
| CAAGTAAAGCCGTTTGTGTG+TGG | - | chr3_2:13391803-13391822 | Msa0395970:intron | 45.0% | |
| GTGTGTGGGTTTCCTAATTG+TGG | - | chr3_2:13391818-13391837 | Msa0395970:intron | 45.0% | |
| CAAGGACGGACAACTTACAA+GGG | + | chr3_2:13391906-13391925 | None:intergenic | 45.0% | |
| ACAAGGACGGACAACTTACA+AGG | + | chr3_2:13391907-13391926 | None:intergenic | 45.0% | |
| AAGAATTCAGGTCAAGGCCA+AGG | - | chr3_2:13392014-13392033 | Msa0395970:intron | 45.0% | |
| AGAATTCAGGTCAAGGCCAA+GGG | - | chr3_2:13392015-13392034 | Msa0395970:intron | 45.0% | |
| TCCTCCCACAGTAGAAATGT+TGG | - | chr3_2:13392057-13392076 | Msa0395970:intron | 45.0% | |
| ACCAACATTTCTACTGTGGG+AGG | + | chr3_2:13392061-13392080 | None:intergenic | 45.0% | |
| GTGCAGGATTGTCAGTAAGA+TGG | - | chr3_2:13392127-13392146 | Msa0395970:CDS | 45.0% | |
| GAATGAATGAGTGAGGCAGG+AGG | + | chr3_2:13389574-13389593 | None:intergenic | 50.0% | |
| GCAGAATGAATGAGTGAGGC+AGG | + | chr3_2:13389577-13389596 | None:intergenic | 50.0% | |
| CCTTGATGAAGCTTCTCAGG+AGG | + | chr3_2:13390841-13390860 | None:intergenic | 50.0% | |
| CCTCCTGAGAAGCTTCATCA+AGG | - | chr3_2:13390838-13390857 | Msa0395970:intron | 50.0% | |
| ! | ATTTTCACCACTACGCGGAG+GGG | + | chr3_2:13391194-13391213 | None:intergenic | 50.0% |
| ! | GATTTTCACCACTACGCGGA+GGG | + | chr3_2:13391195-13391214 | None:intergenic | 50.0% |
| ! | TGATTTTCACCACTACGCGG+AGG | + | chr3_2:13391196-13391215 | None:intergenic | 50.0% |
| CGAGCCTAACTGCAGAATGA+AGG | + | chr3_2:13391417-13391436 | None:intergenic | 50.0% | |
| !! | AACTGCTGGCTTCATGTGTG+CGG | + | chr3_2:13391591-13391610 | None:intergenic | 50.0% |
| AAATGCTTCGGAGGAACTGC+TGG | + | chr3_2:13391605-13391624 | None:intergenic | 50.0% | |
| GAATTCAGGTCAAGGCCAAG+GGG | - | chr3_2:13392016-13392035 | Msa0395970:intron | 50.0% | |
| AGTGAGGCAGGAGGCTACTA+GGG | + | chr3_2:13389565-13389584 | None:intergenic | 55.0% | |
| ACGGAACCTGAATCAGAGGC+TGG | - | chr3_2:13390205-13390224 | Msa0395970:CDS | 55.0% | |
| GAAGTGGTGTGCTTAGAGCC+TGG | - | chr3_2:13391445-13391464 | Msa0395970:intron | 55.0% | |
| TTTCTCTTCACCCCTCCCCT+TGG | + | chr3_2:13392034-13392053 | None:intergenic | 55.0% | |
| GAGTGAGGCAGGAGGCTACT+AGG | + | chr3_2:13389566-13389585 | None:intergenic | 60.0% | |
| GCGTGATGCCTCGCGCATAT+TGG | + | chr3_2:13390785-13390804 | None:intergenic | 60.0% | |
| ! | TATGCGCGAGGCATCACGCT+TGG | - | chr3_2:13390786-13390805 | Msa0395970:CDS | 60.0% |
| AGTTCTACCCCTCCGCGTAG+TGG | - | chr3_2:13391184-13391203 | Msa0395970:intron | 60.0% | |
| TTCAGGTCAAGGCCAAGGGG+AGG | - | chr3_2:13392019-13392038 | Msa0395970:intron | 60.0% | |
| TCAGGTCAAGGCCAAGGGGA+GGG | - | chr3_2:13392020-13392039 | Msa0395970:intron | 60.0% | |
| ! | CGAGGCATCACGCTTGGCCT+TGG | - | chr3_2:13390792-13390811 | Msa0395970:CDS | 65.0% |
| CAGGTCAAGGCCAAGGGGAG+GGG | - | chr3_2:13392021-13392040 | Msa0395970:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 13389540 | 13392323 | 13389540 | ID=Msa0395970;Name=Msa0395970 |
| chr3_2 | mRNA | 13389540 | 13392323 | 13389540 | ID=Msa0395970-mRNA-1;Parent=Msa0395970;Name=Msa0395970-mRNA-1;_AED=0.16;_eAED=0.16;_QI=115|0.8|0.66|1|0.8|0.83|6|179|377 |
| chr3_2 | exon | 13389540 | 13389871 | 13389540 | ID=Msa0395970-mRNA-1:exon:3148;Parent=Msa0395970-mRNA-1 |
| chr3_2 | exon | 13389956 | 13390099 | 13389956 | ID=Msa0395970-mRNA-1:exon:3147;Parent=Msa0395970-mRNA-1 |
| chr3_2 | exon | 13390200 | 13390473 | 13390200 | ID=Msa0395970-mRNA-1:exon:3146;Parent=Msa0395970-mRNA-1 |
| chr3_2 | exon | 13390561 | 13390856 | 13390561 | ID=Msa0395970-mRNA-1:exon:3145;Parent=Msa0395970-mRNA-1 |
| chr3_2 | exon | 13391548 | 13391685 | 13391548 | ID=Msa0395970-mRNA-1:exon:3144;Parent=Msa0395970-mRNA-1 |
| chr3_2 | exon | 13392080 | 13392323 | 13392080 | ID=Msa0395970-mRNA-1:exon:3143;Parent=Msa0395970-mRNA-1 |
| chr3_2 | five_prime_UTR | 13392209 | 13392323 | 13392209 | ID=Msa0395970-mRNA-1:five_prime_utr;Parent=Msa0395970-mRNA-1 |
| chr3_2 | CDS | 13392080 | 13392208 | 13392080 | ID=Msa0395970-mRNA-1:cds;Parent=Msa0395970-mRNA-1 |
| chr3_2 | CDS | 13391548 | 13391685 | 13391548 | ID=Msa0395970-mRNA-1:cds;Parent=Msa0395970-mRNA-1 |
| chr3_2 | CDS | 13390561 | 13390856 | 13390561 | ID=Msa0395970-mRNA-1:cds;Parent=Msa0395970-mRNA-1 |
| chr3_2 | CDS | 13390200 | 13390473 | 13390200 | ID=Msa0395970-mRNA-1:cds;Parent=Msa0395970-mRNA-1 |
| chr3_2 | CDS | 13389956 | 13390099 | 13389956 | ID=Msa0395970-mRNA-1:cds;Parent=Msa0395970-mRNA-1 |
| chr3_2 | CDS | 13389719 | 13389871 | 13389719 | ID=Msa0395970-mRNA-1:cds;Parent=Msa0395970-mRNA-1 |
| chr3_2 | three_prime_UTR | 13389540 | 13389718 | 13389540 | ID=Msa0395970-mRNA-1:three_prime_utr;Parent=Msa0395970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
