AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0251050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0251050 MtrunA17_Chr2g0309251 97.436 429 8 2 1 429 1 426 0.0 863
Msa0251050 MtrunA17_Chr8g0380511 72.340 423 98 5 7 428 11 415 0.0 629
Msa0251050 MtrunA17_Chr7g0274951 54.374 423 187 4 12 428 17 439 1.56e-171 488
Msa0251050 MtrunA17_Chr1g0189961 52.874 435 186 7 9 429 22 451 6.90e-169 481
Msa0251050 MtrunA17_Chr3g0117271 53.808 407 164 7 25 429 112 496 3.07e-155 448
Msa0251050 MtrunA17_Chr8g0368161 54.124 388 155 3 43 429 83 448 2.78e-154 444
Msa0251050 MtrunA17_Chr4g0058771 54.847 392 154 7 40 429 111 481 1.21e-152 441
Msa0251050 MtrunA17_Chr5g0413131 53.351 388 152 5 46 429 101 463 2.65e-145 422
Msa0251050 MtrunA17_Chr2g0314461 48.082 391 169 7 43 429 46 406 3.39e-124 366
Msa0251050 MtrunA17_Chr2g0314451 48.205 390 174 8 41 429 43 405 4.50e-124 365
Msa0251050 MtrunA17_Chr8g0368241 46.173 392 180 5 43 429 49 414 4.37e-122 361
Msa0251050 MtrunA17_Chr2g0314471 47.423 388 176 7 43 429 46 406 6.18e-122 360
Msa0251050 MtrunA17_Chr3g0135381 41.944 391 211 4 45 426 51 434 4.78e-105 319
Msa0251050 MtrunA17_Chr8g0368201 48.148 324 139 6 123 429 9 320 1.88e-103 310
Msa0251050 MtrunA17_Chr6g0453411 41.534 378 201 8 62 429 8 375 6.71e-103 310
Msa0251050 MtrunA17_Chr3g0135371 39.695 393 221 6 45 429 51 435 3.88e-99 303
Msa0251050 MtrunA17_Chr8g0368291 39.394 429 212 12 12 429 14 405 3.27e-96 294
Msa0251050 MtrunA17_Chr2g0326371 49.835 303 130 8 132 429 75 360 6.56e-90 276
Msa0251050 MtrunA17_Chr8g0368341 40.650 369 180 8 63 429 4 335 4.22e-87 268
Msa0251050 MtrunA17_Chr3g0135401 39.521 334 188 4 105 426 16 347 1.26e-80 252
Msa0251050 MtrunA17_Chr8g0368181 58.031 193 80 1 237 429 2 193 7.21e-78 239
Msa0251050 MtrunA17_Chr1g0151871 38.961 308 167 4 123 429 40 327 8.47e-75 236
Msa0251050 MtrunA17_Chr8g0368221 46.094 256 110 6 50 304 30 258 3.71e-71 225
Msa0251050 MtrunA17_Chr8g0368361 51.282 195 92 3 237 429 2 195 5.04e-70 219
Msa0251050 MtrunA17_Chr3g0129891 50.971 206 93 3 225 428 180 379 7.33e-69 223
Msa0251050 MtrunA17_Chr3g0129891 44.615 130 53 4 43 165 79 196 1.87e-19 89.7
Msa0251050 MtrunA17_Chr8g0368331 41.877 277 129 4 182 429 13 286 8.53e-67 214
Msa0251050 MtrunA17_Chr8g0368281 46.632 193 102 1 237 428 2 194 1.18e-57 187
Msa0251050 MtrunA17_Chr3g0135431 33.611 360 152 9 36 321 35 381 4.26e-55 188
Msa0251050 MtrunA17_Chr3g0138811 32.353 374 206 15 59 425 53 386 3.53e-51 177
Msa0251050 MtrunA17_Chr3g0135441 36.626 243 131 5 190 429 10 232 4.03e-51 172
Msa0251050 MtrunA17_Chr8g0368351 41.379 232 102 8 11 238 47 248 3.01e-45 157
Msa0251050 MtrunA17_Chr8g0368261 57.480 127 52 2 304 429 4 129 5.11e-45 152
Msa0251050 MtrunA17_Chr2g0302691 30.376 372 211 13 60 423 37 368 3.50e-42 152
Msa0251050 MtrunA17_Chr8g0339871 38.211 246 137 12 192 428 2 241 2.04e-41 147
Msa0251050 MtrunA17_Chr8g0368231 53.175 126 57 2 305 429 8 132 5.41e-41 142
Msa0251050 MtrunA17_Chr8g0391201 36.066 244 141 11 193 428 3 239 1.76e-38 139
Msa0251050 MtrunA17_Chr8g0368381 47.788 113 59 0 237 349 2 114 6.92e-38 134
Msa0251050 MtrunA17_Chr5g0445181 32.130 277 150 11 90 366 61 299 4.33e-33 126
Msa0251050 MtrunA17_Chr3g0135451 44.697 132 65 2 35 158 28 159 7.63e-29 112
Msa0251050 MtrunA17_Chr8g0368171 32.068 237 116 5 5 238 10 204 2.70e-27 108
Msa0251050 MtrunA17_Chr8g0353931 30.660 212 113 7 33 238 20 203 1.23e-23 98.2
Msa0251050 MtrunA17_Chr2g0302651 30.942 223 122 11 215 428 1 200 3.55e-22 94.0
Msa0251050 MtrunA17_Chr8g0353941 36.022 186 109 7 244 425 3 182 9.76e-22 92.0
Msa0251050 MtrunA17_Chr5g0426971 28.390 236 142 7 190 423 46 256 4.87e-21 92.0
Msa0251050 MtrunA17_Chr5g0434771 35.849 159 94 5 250 406 12 164 1.39e-20 89.0
Msa0251050 MtrunA17_Chr8g0353961 35.036 137 65 4 31 156 12 135 9.68e-20 85.9
Msa0251050 MtrunA17_Chr8g0353971 32.164 171 108 4 257 423 4 170 1.28e-19 85.9
Msa0251050 MtrunA17_Chr8g0368321 41.176 119 52 4 41 158 41 142 8.44e-18 80.9
Msa0251050 MtrunA17_Chr8g0368271 33.548 155 86 6 9 158 11 153 9.32e-17 78.6
Msa0251050 MtrunA17_Chr5g0443801 36.697 109 67 2 192 300 21 127 2.17e-15 73.9
Msa0251050 MtrunA17_Chr3g0135411 61.224 49 19 0 45 93 64 112 6.45e-14 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0251050 AT3G13510.1 70.396 429 109 5 1 429 9 419 0.0 625
Msa0251050 AT1G55360.1 70.862 429 107 5 1 429 12 422 0.0 622
Msa0251050 AT5G56530.2 69.811 424 109 5 5 428 15 419 0.0 615
Msa0251050 AT5G56530.1 69.811 424 109 5 5 428 15 419 0.0 615
Msa0251050 AT2G44210.1 68.434 396 119 5 35 429 25 415 0.0 576
Msa0251050 AT2G44210.2 63.615 426 119 6 35 429 25 445 0.0 561
Msa0251050 AT5G18460.1 58.673 392 153 6 40 428 44 429 2.37e-164 469
Msa0251050 AT2G44220.1 51.928 389 170 4 42 429 31 403 5.21e-157 449
Msa0251050 AT1G10750.1 55.243 391 151 5 41 429 99 467 1.06e-154 446
Msa0251050 AT5G50150.1 53.964 391 157 5 41 429 51 420 6.94e-153 440
Msa0251050 AT1G23340.2 50.116 431 191 6 1 429 1 409 1.86e-151 436
Msa0251050 AT1G23340.1 50.116 431 191 6 1 429 1 409 1.86e-151 436
Msa0251050 AT1G70550.1 53.964 391 156 6 41 429 97 465 2.82e-149 432
Msa0251050 AT2G44240.1 47.897 428 192 7 3 429 5 402 1.21e-140 408
Msa0251050 AT2G17750.1 44.762 420 202 7 9 428 6 395 4.98e-133 388
Msa0251050 AT2G19360.1 46.189 433 199 7 14 428 9 425 7.56e-131 384
Msa0251050 AT2G44250.1 44.419 430 203 10 5 428 9 408 3.86e-121 358
Msa0251050 AT3G48230.1 43.669 387 187 11 50 429 11 373 1.05e-109 328
Msa0251050 AT5G25950.1 40.842 404 208 9 44 429 42 432 1.14e-93 289
Msa0251050 AT1G23340.3 48.366 306 134 6 1 304 1 284 3.01e-93 283
Msa0251050 AT5G19170.1 40.000 390 201 10 40 423 3 365 4.08e-93 286
Msa0251050 AT2G44250.2 45.833 312 159 7 121 428 20 325 1.61e-91 280
Msa0251050 AT2G20170.1 39.075 389 206 13 42 423 32 396 9.33e-85 265
Msa0251050 AT2G20170.2 39.075 389 206 13 42 423 32 396 9.33e-85 265
Msa0251050 AT5G25960.1 39.075 389 180 8 44 429 23 357 1.03e-81 256
Msa0251050 AT2G20170.3 35.990 389 201 13 42 423 32 379 3.87e-73 234
Msa0251050 AT4G23370.1 35.417 384 216 13 50 423 40 401 5.99e-70 227
Msa0251050 AT4G23355.1 35.696 395 210 14 42 423 35 398 1.15e-68 223
Msa0251050 AT4G23350.1 33.419 389 229 10 42 423 35 400 2.28e-67 220
Msa0251050 AT4G23390.1 35.509 383 212 14 50 423 41 397 6.42e-66 216
Msa0251050 AT4G23365.1 33.085 402 211 14 42 423 35 398 6.87e-66 216
Msa0251050 AT4G23360.1 34.097 393 220 12 42 423 35 399 3.07e-64 212
Msa0251050 AT4G23380.1 32.143 392 227 11 42 423 36 398 3.03e-62 206
Msa0251050 AT1G70550.2 49.770 217 85 6 41 255 97 291 1.23e-60 199
Msa0251050 AT2G35250.1 35.440 364 182 12 67 425 24 339 1.28e-54 185
Msa0251050 AT1G10750.2 42.797 236 105 7 46 276 105 315 9.33e-53 180
Msa0251050 AT1G10190.1 33.085 402 222 18 35 423 27 394 1.70e-49 173
Msa0251050 AT4G15050.1 33.333 405 217 19 35 423 27 394 1.73e-47 167
Msa0251050 AT4G15053.1 31.378 392 231 15 42 423 38 401 1.86e-46 165
Msa0251050 AT5G46810.1 30.000 370 212 13 70 423 11 349 1.72e-43 156
Msa0251050 AT2G27320.1 33.016 315 161 10 69 380 30 297 5.95e-41 148
Msa0251050 AT4G17505.1 29.032 372 193 10 58 426 18 321 1.11e-40 147
Msa0251050 AT5G46820.1 27.532 385 221 13 55 423 5 347 1.34e-40 148
Msa0251050 AT5G05030.1 30.287 383 211 18 54 425 22 359 3.52e-39 144
Msa0251050 AT2G24950.1 28.972 428 249 19 8 423 25 409 3.94e-39 145
Msa0251050 AT4G10220.1 29.008 393 230 16 42 423 44 398 1.45e-38 144
Msa0251050 AT4G23373.1 32.319 263 131 9 13 274 7 223 1.84e-38 141
Msa0251050 AT5G25410.1 26.862 376 229 12 54 423 28 363 1.58e-36 137
Msa0251050 AT5G60380.1 27.778 378 221 14 57 423 31 367 5.49e-35 133
Msa0251050 AT5G46200.1 27.110 391 232 13 70 423 31 405 5.55e-35 134
Msa0251050 AT4G10210.1 27.857 420 251 16 1 406 3 384 2.48e-32 127
Msa0251050 AT4G17860.1 28.378 370 202 16 70 423 29 351 4.08e-32 125
Msa0251050 AT4G23080.1 27.064 436 262 17 10 425 7 406 1.55e-30 122
Msa0251050 AT2G38255.1 33.333 225 105 7 70 292 14 195 1.71e-29 114
Msa0251050 AT5G11660.1 30.368 326 188 14 114 425 4 304 1.56e-28 114
Msa0251050 AT5G25415.1 27.219 338 205 13 105 425 19 332 4.73e-23 99.8
Msa0251050 AT2G03930.2 42.105 114 62 3 170 281 31 142 7.51e-23 95.1
Msa0251050 AT5G36680.1 27.213 305 181 11 131 423 52 327 9.96e-20 90.1
Msa0251050 AT5G36770.1 27.213 305 181 11 131 423 52 327 9.96e-20 90.1
Msa0251050 AT5G37520.1 32.328 232 116 13 199 424 2 198 6.00e-19 85.1
Msa0251050 AT5G04937.1 30.000 210 120 7 221 423 9 198 2.89e-18 83.2

Find 161 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTAGCTCTGTTCAAAATTT+TGG 0.058994 2_2:+40250744 Msa0251050:CDS
ATCCACCAGTTTCCCTCTTT+TGG 0.121092 2_2:-40252543 None:intergenic
AATTCAGTCTGTCTCAAATT+TGG 0.126548 2_2:+40251319 Msa0251050:CDS
TTCCCTTCTGGATGGAAATT+TGG 0.152045 2_2:-40250579 None:intergenic
ATATGTATATTTATTTATTT+TGG 0.152989 2_2:+40253325 Msa0251050:three_prime_UTR
ACACTAGACTCTTCACTTAT+TGG 0.158217 2_2:+40251714 Msa0251050:CDS
TTATAGCATATACAATTAAA+TGG 0.200131 2_2:-40249668 None:intergenic
CATCCAGAAGGGAAAACTTT+TGG 0.204617 2_2:+40250588 Msa0251050:CDS
GCTTTAATGGAGGCCAATTT+TGG 0.214424 2_2:+40249824 Msa0251050:exon
TCTGTCTCAAATTTGGATTT+TGG 0.224441 2_2:+40251326 Msa0251050:CDS
CCAGAACAAGTGACATATTA+AGG 0.229209 2_2:+40250721 Msa0251050:CDS
CATAGGATAAGCTTCAAAAT+TGG 0.235823 2_2:+40249559 Msa0251050:five_prime_UTR
TTCTGCCAAAGCTGAGTTAT+AGG 0.242996 2_2:-40250657 None:intergenic
TTGGAATAAATGAATATATT+AGG 0.249950 2_2:-40249223 None:intergenic
TGCATTTGGAGAAGCTTTAA+TGG 0.266793 2_2:+40249811 Msa0251050:exon
CCTTAATATGTCACTTGTTC+TGG 0.271266 2_2:-40250721 None:intergenic
ACAAAGACTAATGAAGTTAA+AGG 0.281182 2_2:-40249730 None:intergenic
CTTGTTCTGGTCCTTCTTAT+AGG 0.284686 2_2:-40250708 None:intergenic
TTTGGAAATGACCATGTTCT+AGG 0.286569 2_2:+40252570 Msa0251050:CDS
TGTTACAATCTCCTTTGTTC+TGG 0.293166 2_2:+40251868 Msa0251050:CDS
CCAAGATGCTTATATCATAT+TGG 0.295235 2_2:-40251960 None:intergenic
CCTGAATCTTGTGATCTTTG+AGG 0.299817 2_2:-40250419 None:intergenic
GCAGAAGCATAATCCAAAAT+TGG 0.311137 2_2:-40249837 None:intergenic
GTGTAAGTACCAAGATCTTT+TGG 0.311380 2_2:-40252795 None:intergenic
TGGATTATGCTTCTGCTTGT+TGG 0.325487 2_2:+40249844 Msa0251050:CDS
TGGGGCACCTACTTCTATTA+TGG 0.331136 2_2:+40252864 Msa0251050:CDS
AAGGAACAAAACTACAAATA+AGG 0.338511 2_2:+40249291 Msa0251050:five_prime_UTR
GGAAACTGGTGGATGCAATT+TGG 0.341439 2_2:+40252552 Msa0251050:CDS
ATAAAAGATCAAGGACAGTT+AGG 0.341879 2_2:-40252903 None:intergenic
TGAGACAGACTGAATTCATT+AGG 0.345968 2_2:-40251312 None:intergenic
ATATCCCCACTTTCTAACTA+TGG 0.346949 2_2:+40251931 Msa0251050:CDS
AACTGGTAGTGCTGGTGATT+GGG 0.351854 2_2:+40252845 Msa0251050:CDS
CCTCAAAGATCACAAGATTC+AGG 0.363603 2_2:+40250419 Msa0251050:CDS
ATCTTGTGATCTTTGAGGTC+AGG 0.364868 2_2:-40250414 None:intergenic
CAAGATGCTTATATCATATT+GGG 0.373261 2_2:-40251959 None:intergenic
ATGACCATGTTCTAGGATAT+TGG 0.377822 2_2:+40252577 Msa0251050:CDS
GCTCTCACCACCACCGTTCC+CGG 0.378518 2_2:-40249918 None:intergenic
GAGCTACCACTTAGGTAATA+TGG 0.378586 2_2:+40253086 Msa0251050:three_prime_UTR
TTATTGTCACCGTACAAATC+AGG 0.381973 2_2:-40251692 None:intergenic
GAGAAAGAATGAAAAGTTTG+TGG 0.388793 2_2:-40249197 None:intergenic
AACTGTTATAATGTCAAAAC+TGG 0.390356 2_2:+40252828 Msa0251050:CDS
TGAACAGAATATTCTCTAGT+AGG 0.392533 2_2:+40253290 Msa0251050:three_prime_UTR
TTGGTTCCTTTCACTTGTGC+TGG 0.399660 2_2:+40249872 Msa0251050:CDS
TCTACCTTGATGGACTTAAC+AGG 0.400382 2_2:-40249998 None:intergenic
GCTTTCACAGCTCCAGAGAT+AGG 0.400467 2_2:-40253251 None:intergenic
CTACTTCTATTATGGTGGTC+CGG 0.402420 2_2:+40252872 Msa0251050:CDS
TGTATGTAATATTCTACCTT+AGG 0.404535 2_2:-40249594 None:intergenic
TAAGCTTCAAAATTGGGTTA+AGG 0.406474 2_2:+40249566 Msa0251050:five_prime_UTR
GTGGAGGGAGGTGAATTCTA+TGG 0.407436 2_2:+40251246 Msa0251050:CDS
CAAAGGCAACCATAAACGTT+TGG 0.411879 2_2:+40251271 Msa0251050:CDS
ATAGGATAAGCTTCAAAATT+GGG 0.416322 2_2:+40249560 Msa0251050:five_prime_UTR
ACTTTATGAGAATTGTCAAA+TGG 0.423931 2_2:-40249772 None:intergenic
TTGATGGTGACAACAAGTTA+AGG 0.430415 2_2:+40252769 Msa0251050:CDS
GCCACCATCAGCACCACCAC+CGG 0.431095 2_2:+40249899 Msa0251050:CDS
CAAAGCCTATAACTCAGCTT+TGG 0.444736 2_2:+40250652 Msa0251050:CDS
ACCACCACCGTTCCCGGTGG+TGG 0.447471 2_2:-40249912 None:intergenic
TAAAAGATCAAGGACAGTTA+GGG 0.448907 2_2:-40252902 None:intergenic
ACAGCACACATCAACACAAA+TGG 0.449226 2_2:+40252683 Msa0251050:CDS
CCAATATGATATAAGCATCT+TGG 0.452731 2_2:+40251960 Msa0251050:CDS
TTAAGGGCTCCAAAAGATCT+TGG 0.459260 2_2:+40252786 Msa0251050:CDS
CTTTATGAGAATTGTCAAAT+GGG 0.459992 2_2:-40249771 None:intergenic
AAAGGCAACCATAAACGTTT+GGG 0.461848 2_2:+40251272 Msa0251050:CDS
AAACTGGTAGTGCTGGTGAT+TGG 0.461992 2_2:+40252844 Msa0251050:CDS
AGGACCCAAAAGAGGGAAAC+TGG 0.463817 2_2:+40252538 Msa0251050:intron
TCAGTTAGGTATGAGAATAA+AGG 0.467064 2_2:-40252606 None:intergenic
TATAGCATATACAATTAAAT+GGG 0.468805 2_2:-40249667 None:intergenic
CTTGACTCAGAGTGGTCATC+AGG 0.468890 2_2:+40250824 Msa0251050:CDS
TGATGGTGACAACAAGTTAA+GGG 0.475300 2_2:+40252770 Msa0251050:CDS
TGTTGGAGAAAGAGGGTGAT+GGG 0.475386 2_2:+40253151 Msa0251050:three_prime_UTR
ATCTCTGGAGCTGTGAAAGC+TGG 0.479478 2_2:+40253254 Msa0251050:three_prime_UTR
CAAAGACTAATGAAGTTAAA+GGG 0.481462 2_2:-40249729 None:intergenic
TCATTGAGGCACTCTCAGTT+AGG 0.484694 2_2:-40252620 None:intergenic
TACTTCTATTATGGTGGTCC+GGG 0.485729 2_2:+40252873 Msa0251050:CDS
ATTAACAATGGTATAGCCCT+TGG 0.488395 2_2:+40251901 Msa0251050:CDS
GCCTTGCCAAAACCTTCATC+AGG 0.488665 2_2:-40252720 None:intergenic
ATGATATAAGCATCTTGGTC+TGG 0.490781 2_2:+40251965 Msa0251050:CDS
AGAGTGCCTCAATGATTGAA+TGG 0.494264 2_2:+40252628 Msa0251050:CDS
TGGATTGCAATTTAAAACTA+CGG 0.494301 2_2:+40252985 Msa0251050:intron
AAGGAACAATTCCTATAAGA+AGG 0.498065 2_2:+40250697 Msa0251050:CDS
ACCACCACCGGGAACGGTGG+TGG 0.505459 2_2:+40249911 Msa0251050:CDS
CAGCATTGAAGCAGGCTGGC+AGG 0.505596 2_2:+40251374 Msa0251050:CDS
GAACAGAATATTCTCTAGTA+GGG 0.506018 2_2:+40253291 Msa0251050:three_prime_UTR
TTGGGTTAAGGTTAAGCCTA+AGG 0.507890 2_2:+40249578 Msa0251050:five_prime_UTR
CCACTCTGAGTCAAGATGTC+AGG 0.518935 2_2:-40250816 None:intergenic
CAGCACACATCAACACAAAT+GGG 0.520852 2_2:+40252684 Msa0251050:CDS
CAGAACAAGTGACATATTAA+GGG 0.521105 2_2:+40250722 Msa0251050:CDS
GAGTGCCTCAATGATTGAAT+GGG 0.527263 2_2:+40252629 Msa0251050:CDS
GTTCCCGGTGGTGGTGCTGA+TGG 0.531155 2_2:-40249903 None:intergenic
TTAGCATGCCATAGCTTATG+TGG 0.531230 2_2:+40251227 Msa0251050:intron
AATGTCAAAACTGGTAGTGC+TGG 0.534590 2_2:+40252837 Msa0251050:CDS
GGCACCTACTTCTATTATGG+TGG 0.539245 2_2:+40252867 Msa0251050:CDS
GATCTCAACAGCATTGAAGC+AGG 0.539985 2_2:+40251366 Msa0251050:CDS
GAAGAACCATAGTTAGAAAG+TGG 0.541399 2_2:-40251937 None:intergenic
TTGTGAAAGCAGAGTCCTGA+TGG 0.541959 2_2:+40250342 Msa0251050:intron
CCACCATCAGCACCACCACC+GGG 0.545767 2_2:+40249900 Msa0251050:CDS
AGGTCAGGGTGATCAAAAGC+TGG 0.547634 2_2:-40250399 None:intergenic
TCTGGAGCTGTGAAAGCTGG+TGG 0.550324 2_2:+40253257 Msa0251050:three_prime_UTR
AATACAATATACAAGTTGAA+AGG 0.552703 2_2:+40249152 Msa0251050:five_prime_UTR
ACCTCCCTCCACATAAGCTA+TGG 0.557000 2_2:-40251235 None:intergenic
CCCGGTGGTGGTGCTGATGG+TGG 0.557572 2_2:-40249900 None:intergenic
ACAGAGTTTGAGTTGAGTTG+AGG 0.560754 2_2:-40249125 None:intergenic
TGTAAGTTGAGCTACCACTT+AGG 0.562344 2_2:+40253078 Msa0251050:three_prime_UTR
TAATGTGTAGGACCCAAAAG+AGG 0.564000 2_2:+40252530 Msa0251050:intron
GGCTTTATTCAAATTAACAA+TGG 0.564459 2_2:+40251889 Msa0251050:CDS
TGGGGATATACTTGCTCCAA+GGG 0.564591 2_2:-40251917 None:intergenic
ACATCAACACAAATGGGAAG+TGG 0.565243 2_2:+40252690 Msa0251050:CDS
CAGTCAATAATATCTCCATC+AGG 0.565977 2_2:-40250357 None:intergenic
TATACACCATATTACCTAAG+TGG 0.566286 2_2:-40253092 None:intergenic
AGCTTTAACATAAAAGATCA+AGG 0.566363 2_2:-40252912 None:intergenic
TAGGTCAGCCCTGATTTGTA+CGG 0.566591 2_2:+40251683 Msa0251050:intron
GGGAACGGTGGTGGTGAGAG+CGG 0.566812 2_2:+40249920 Msa0251050:CDS
TCTTGTGATCTTTGAGGTCA+GGG 0.570285 2_2:-40250413 None:intergenic
AGGTATGAGAATAAAGGAGC+TGG 0.573128 2_2:-40252600 None:intergenic
GAAGCTCAAAATTCTCATTG+AGG 0.576114 2_2:+40253117 Msa0251050:three_prime_UTR
CTGGAGCTGTGAAAGCTGGT+GGG 0.576766 2_2:+40253258 Msa0251050:three_prime_UTR
ACCACCCCATTCAATCATTG+AGG 0.578345 2_2:-40252634 None:intergenic
AACGGTGGTGGTGAGAGCGG+TGG 0.580017 2_2:+40249923 Msa0251050:CDS
GTGGGGATATACTTGCTCCA+AGG 0.581673 2_2:-40251918 None:intergenic
TCAACAGCATTGAAGCAGGC+TGG 0.583391 2_2:+40251370 Msa0251050:CDS
TATTGTCACCGTACAAATCA+GGG 0.584428 2_2:-40251691 None:intergenic
AGGCCAAATTTCCATCCAGA+AGG 0.584529 2_2:+40250576 Msa0251050:CDS
CGGACCACCATAATAGAAGT+AGG 0.584855 2_2:-40252871 None:intergenic
TGGTTCAATTCAGAAACTTG+AGG 0.588867 2_2:+40249943 Msa0251050:CDS
TATAAGCATCTTGGTCTGGA+AGG 0.589005 2_2:+40251969 Msa0251050:CDS
TCTCTACACACTGTGAGTAG+TGG 0.593387 2_2:+40249100 Msa0251050:five_prime_UTR
TTGTTGGAGAAAGAGGGTGA+TGG 0.593904 2_2:+40253150 Msa0251050:three_prime_UTR
AAGAACCATAGTTAGAAAGT+GGG 0.595857 2_2:-40251936 None:intergenic
ACTGGTAGTGCTGGTGATTG+GGG 0.595966 2_2:+40252846 Msa0251050:CDS
TTTGAATAAAGCCAGAACAA+AGG 0.597232 2_2:-40251879 None:intergenic
TGAGTCAAGATGTCAGGTAG+AGG 0.600193 2_2:-40250810 None:intergenic
ATCAGCACCACCACCGGGAA+CGG 0.601551 2_2:+40249905 Msa0251050:CDS
GCTCTGCCAGCACAAGTGAA+AGG 0.602569 2_2:-40249878 None:intergenic
CAGGGTGATCAAAAGCTGGT+TGG 0.603523 2_2:-40250395 None:intergenic
AGTGATGCATATCAAGCCAC+TGG 0.605418 2_2:+40251844 Msa0251050:CDS
AGGTGAATTCTATGGAGCAA+AGG 0.606477 2_2:+40251254 Msa0251050:CDS
CTGGCCAATATCCTAGAACA+TGG 0.606699 2_2:-40252581 None:intergenic
AGCACCACCACCGGGAACGG+TGG 0.613079 2_2:+40249908 Msa0251050:CDS
ACCGCCTGTTAAGTCCATCA+AGG 0.617331 2_2:+40249994 Msa0251050:CDS
AATGTGTAGGACCCAAAAGA+GGG 0.621507 2_2:+40252531 Msa0251050:intron
GAAAAGTTTGTGGAAATGCA+TGG 0.631042 2_2:-40249187 None:intergenic
TTTGTGGAAATGCATGGTGG+TGG 0.632552 2_2:-40249181 None:intergenic
AACAGAATATTCTCTAGTAG+GGG 0.643070 2_2:+40253292 Msa0251050:three_prime_UTR
GGCCAAATTTCCATCCAGAA+GGG 0.643729 2_2:+40250577 Msa0251050:CDS
CATGCCATAGCTTATGTGGA+GGG 0.644068 2_2:+40251231 Msa0251050:CDS
GCATGCCATAGCTTATGTGG+AGG 0.646750 2_2:+40251230 Msa0251050:intron
AAGGAGATTGTAACAACCAG+TGG 0.647251 2_2:-40251860 None:intergenic
AGAACCATAGTTAGAAAGTG+GGG 0.647282 2_2:-40251935 None:intergenic
ATTTGGAGAAGCTTTAATGG+AGG 0.650311 2_2:+40249814 Msa0251050:exon
GCTGTTGAGATCTTGACCAA+AGG 0.656530 2_2:-40251355 None:intergenic
GCCATAGCTTATGTGGAGGG+AGG 0.658878 2_2:+40251234 Msa0251050:CDS
GGACAGTTAGGGTTTCGACC+CGG 0.661025 2_2:-40252891 None:intergenic
AAATACAAACAAAACAAGTG+TGG 0.661764 2_2:-40249371 None:intergenic
GTAGTGAATTCTGAGTCTGA+TGG 0.665391 2_2:+40252660 Msa0251050:CDS
GCCTCAATGATTGAATGGGG+TGG 0.671790 2_2:+40252633 Msa0251050:CDS
ACCTTGATGGACTTAACAGG+CGG 0.695557 2_2:-40249995 None:intergenic
CCTGACATCTTGACTCAGAG+TGG 0.701149 2_2:+40250816 Msa0251050:CDS
ACCCAAAAGAGGGAAACTGG+TGG 0.707549 2_2:+40252541 Msa0251050:CDS
CTCACCACCACCGTTCCCGG+TGG 0.716489 2_2:-40249915 None:intergenic
TGTGGTTTGACACTTTGACA+AGG 0.742270 2_2:-40249353 None:intergenic
AGTGCCTCAATGATTGAATG+GGG 0.753510 2_2:+40252630 Msa0251050:CDS
AAGTTTGTGGAAATGCATGG+TGG 0.762270 2_2:-40249184 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAATATAGAACTTTTTA+TGG + chr2_2:40249695-40249714 Msa0251050:five_prime_UTR 10.0%
!!! TTGTAAAAAATTAAACTTTT+TGG + chr2_2:40250092-40250111 Msa0251050:intron 10.0%
!!! TGTAAAAAATTAAACTTTTT+GGG + chr2_2:40250093-40250112 Msa0251050:intron 10.0%
!!! ATTTTAGTATGTTTTTATAT+TGG + chr2_2:40250220-40250239 Msa0251050:intron 10.0%
!!! GATTTAATTTTTAGATTTTT+AGG + chr2_2:40250271-40250290 Msa0251050:intron 10.0%
!!! CAAAAAATAACATTTTAAAA+AGG - chr2_2:40252001-40252020 None:intergenic 10.0%
!!! AAAATGTTATTTTTTGTTAT+TGG + chr2_2:40252005-40252024 Msa0251050:intron 10.0%
!! TTGGAATAAATGAATATATT+AGG - chr2_2:40249226-40249245 None:intergenic 15.0%
!!! AAGAAATTTTTTTGATCAAA+GGG + chr2_2:40249314-40249333 Msa0251050:five_prime_UTR 15.0%
!! NNGAAAAAAACAATAACAAA+AGG + chr2_2:40249498-40249517 Msa0251050:intron 15.0%
!! TATAGCATATACAATTAAAT+GGG - chr2_2:40249670-40249689 None:intergenic 15.0%
!! TTATAGCATATACAATTAAA+TGG - chr2_2:40249671-40249690 None:intergenic 15.0%
!! TTTCTAAATTCAAACAATTA+TGG + chr2_2:40250537-40250556 Msa0251050:intron 15.0%
!! TTCTAAATTCAAACAATTAT+GGG + chr2_2:40250538-40250557 Msa0251050:intron 15.0%
!! AAATTGGTTATTGAAATTTA+TGG - chr2_2:40251025-40251044 None:intergenic 15.0%
!! AACATATACTATCATAAAAA+AGG - chr2_2:40251116-40251135 None:intergenic 15.0%
!! TAAAACAAATACATTTAATC+AGG - chr2_2:40251178-40251197 None:intergenic 15.0%
!! ATTGATACATATTAAATTCA+TGG - chr2_2:40252478-40252497 None:intergenic 15.0%
!! TGAATAAAAAAATAATGTGT+AGG + chr2_2:40252518-40252537 Msa0251050:intron 15.0%
!!! TAGTTATTTCAAAAATATTC+AGG + chr2_2:40252743-40252762 Msa0251050:CDS 15.0%
!!! AATACAATATACAAGTTGAA+AGG + chr2_2:40249152-40249171 Msa0251050:five_prime_UTR 20.0%
!!! GTATATTTTGTTGTCTTATA+AGG + chr2_2:40249272-40249291 Msa0251050:five_prime_UTR 20.0%
!!! GAAGAAATTTTTTTGATCAA+AGG + chr2_2:40249313-40249332 Msa0251050:five_prime_UTR 20.0%
!! AAAAAAACAATAACAAAAGG+AGG + chr2_2:40249501-40249520 Msa0251050:five_prime_UTR 20.0%
!!! TAGAACTTTTTATGGTTTTT+TGG + chr2_2:40249703-40249722 Msa0251050:five_prime_UTR 20.0%
!!! ATAACGGTTTTATTTCTAAT+TGG + chr2_2:40250066-40250085 Msa0251050:intron 20.0%
!!! TAACGGTTTTATTTCTAATT+GGG + chr2_2:40250067-40250086 Msa0251050:intron 20.0%
!! AAATGAACTATGTTTATGAA+TGG - chr2_2:40250298-40250317 None:intergenic 20.0%
!! TCAATAATTGACGAATAAAT+TGG - chr2_2:40251041-40251060 None:intergenic 20.0%
!!! TCCTTTTGATTTTATTTTCT+TGG + chr2_2:40251199-40251218 Msa0251050:intron 20.0%
!! TCCAAGAAAATAAAATCAAA+AGG - chr2_2:40251203-40251222 None:intergenic 20.0%
!! TTTAAAAGCTAATTTGACAT+CGG + chr2_2:40252313-40252332 Msa0251050:intron 20.0%
!!! GATTGAAAAAAGGGTATTAT+TGG - chr2_2:40249245-40249264 None:intergenic 25.0%
! AAGGAACAAAACTACAAATA+AGG + chr2_2:40249291-40249310 Msa0251050:five_prime_UTR 25.0%
!!! TTGACAAGGTTGATAAAAAA+GGG - chr2_2:40249342-40249361 None:intergenic 25.0%
!!! TTTGACAAGGTTGATAAAAA+AGG - chr2_2:40249343-40249362 None:intergenic 25.0%
! AAATACAAACAAAACAAGTG+TGG - chr2_2:40249374-40249393 None:intergenic 25.0%
! ATAGGATAAGCTTCAAAATT+GGG + chr2_2:40249560-40249579 Msa0251050:five_prime_UTR 25.0%
! TGTATGTAATATTCTACCTT+AGG - chr2_2:40249597-40249616 None:intergenic 25.0%
! CAAAGACTAATGAAGTTAAA+GGG - chr2_2:40249732-40249751 None:intergenic 25.0%
! ACAAAGACTAATGAAGTTAA+AGG - chr2_2:40249733-40249752 None:intergenic 25.0%
! CTTTATGAGAATTGTCAAAT+GGG - chr2_2:40249774-40249793 None:intergenic 25.0%
! ACTTTATGAGAATTGTCAAA+TGG - chr2_2:40249775-40249794 None:intergenic 25.0%
!!! TTAAACTTTTTGGGTTTGAA+AGG + chr2_2:40250102-40250121 Msa0251050:intron 25.0%
! ATTGTAGTGAAAAAGACTAA+AGG - chr2_2:40250156-40250175 None:intergenic 25.0%
!!! AGTCTTTTTCACTACAATAA+TGG + chr2_2:40250158-40250177 Msa0251050:intron 25.0%
!!! TCTTTCTTTTATGTGTCATT+TGG + chr2_2:40250501-40250520 Msa0251050:intron 25.0%
! TAGTATATGTTACTATAGCA+TGG + chr2_2:40251125-40251144 Msa0251050:intron 25.0%
!!! CATTAGGTTGTTGAATTTTT+GGG - chr2_2:40251299-40251318 None:intergenic 25.0%
!!! TCATTAGGTTGTTGAATTTT+TGG - chr2_2:40251300-40251319 None:intergenic 25.0%
! TGTATGACTTAAATGGTTAA+TGG + chr2_2:40251431-40251450 Msa0251050:intron 25.0%
!! CGTTATCTTTTGAATGATTT+TGG + chr2_2:40251620-40251639 Msa0251050:intron 25.0%
!! AATTTAATGAAAGCACAAAG+TGG - chr2_2:40251765-40251784 None:intergenic 25.0%
!!! GGCTTTATTCAAATTAACAA+TGG + chr2_2:40251889-40251908 Msa0251050:CDS 25.0%
! CAAGATGCTTATATCATATT+GGG - chr2_2:40251962-40251981 None:intergenic 25.0%
!! GGCATATTTTCTTTCTATAA+TGG - chr2_2:40252031-40252050 None:intergenic 25.0%
! AAATAACAGCTTAGAATCAT+TGG - chr2_2:40252356-40252375 None:intergenic 25.0%
! AAATTTGAATTCGTACACAT+GGG + chr2_2:40252405-40252424 Msa0251050:intron 25.0%
!!! AAAAATATTCAGGTTGTTGA+TGG + chr2_2:40252753-40252772 Msa0251050:CDS 25.0%
! AACTGTTATAATGTCAAAAC+TGG + chr2_2:40252828-40252847 Msa0251050:CDS 25.0%
!! AGCTTTAACATAAAAGATCA+AGG - chr2_2:40252915-40252934 None:intergenic 25.0%
!! TTTTAAATTGCAGGTAAATG+CGG + chr2_2:40252939-40252958 Msa0251050:intron 25.0%
!! TGGATTGCAATTTAAAACTA+CGG + chr2_2:40252985-40253004 Msa0251050:intron 25.0%
!! AGCTTTTCATTAATCAAACA+TGG - chr2_2:40253353-40253372 None:intergenic 25.0%
GAGAAAGAATGAAAAGTTTG+TGG - chr2_2:40249200-40249219 None:intergenic 30.0%
!!! AATACCCTTTTTTCAATCGT+CGG + chr2_2:40249247-40249266 Msa0251050:five_prime_UTR 30.0%
!! TGACAAGGTTGATAAAAAAG+GGG - chr2_2:40249341-40249360 None:intergenic 30.0%
!!! GTTGTTGTTGTTTGTTTTGT+TGG + chr2_2:40249529-40249548 Msa0251050:five_prime_UTR 30.0%
!!! TTGTTGTTTGTTTTGTTGGT+GGG + chr2_2:40249533-40249552 Msa0251050:five_prime_UTR 30.0%
CATAGGATAAGCTTCAAAAT+TGG + chr2_2:40249559-40249578 Msa0251050:five_prime_UTR 30.0%
TAAGCTTCAAAATTGGGTTA+AGG + chr2_2:40249566-40249585 Msa0251050:five_prime_UTR 30.0%
CAAAAAGTTATCTACCTTGA+TGG - chr2_2:40250011-40250030 None:intergenic 30.0%
!! CTTTTTCATTGGTTGCATAA+CGG + chr2_2:40250050-40250069 Msa0251050:intron 30.0%
!! TTGAAAGGAACTTTAGTTCT+TGG + chr2_2:40250117-40250136 Msa0251050:intron 30.0%
!! TGAAAGGAACTTTAGTTCTT+GGG + chr2_2:40250118-40250137 Msa0251050:intron 30.0%
TATGCAAGTGTACTTTGTTA+TGG + chr2_2:40250317-40250336 Msa0251050:intron 30.0%
AAAAATGGTATGTGTTCTGA+AGG + chr2_2:40250678-40250697 Msa0251050:CDS 30.0%
AAGGAACAATTCCTATAAGA+AGG + chr2_2:40250697-40250716 Msa0251050:CDS 30.0%
CAGAACAAGTGACATATTAA+GGG + chr2_2:40250722-40250741 Msa0251050:CDS 30.0%
TAGGTGCATTATAAGTAACA+TGG - chr2_2:40250861-40250880 None:intergenic 30.0%
GGTTATTGAAATTTATGGAC+CGG - chr2_2:40251020-40251039 None:intergenic 30.0%
AATTCAGTCTGTCTCAAATT+TGG + chr2_2:40251319-40251338 Msa0251050:CDS 30.0%
! TCTGTCTCAAATTTGGATTT+TGG + chr2_2:40251326-40251345 Msa0251050:CDS 30.0%
CATCTTCTGTATGACTTAAA+TGG + chr2_2:40251424-40251443 Msa0251050:intron 30.0%
!!! CCAATGATTGTTTTTTTCAC+GGG - chr2_2:40251500-40251519 None:intergenic 30.0%
!!! GCCAATGATTGTTTTTTTCA+CGG - chr2_2:40251501-40251520 None:intergenic 30.0%
TTTGAATAAAGCCAGAACAA+AGG - chr2_2:40251882-40251901 None:intergenic 30.0%
AAGAACCATAGTTAGAAAGT+GGG - chr2_2:40251939-40251958 None:intergenic 30.0%
CCAAGATGCTTATATCATAT+TGG - chr2_2:40251963-40251982 None:intergenic 30.0%
CCAATATGATATAAGCATCT+TGG + chr2_2:40251960-40251979 Msa0251050:CDS 30.0%
TTGTAGTGTTAGTTAAGTGT+GGG - chr2_2:40252053-40252072 None:intergenic 30.0%
ATTGTAGTGTTAGTTAAGTG+TGG - chr2_2:40252054-40252073 None:intergenic 30.0%
ATGCGTGTATAATGTATGTA+TGG + chr2_2:40252168-40252187 Msa0251050:intron 30.0%
! AGTATTGGATGAAAATCAGA+CGG + chr2_2:40252281-40252300 Msa0251050:intron 30.0%
TAAATGCATGGAATCTATGA+CGG + chr2_2:40252378-40252397 Msa0251050:intron 30.0%
GAAATTTGAATTCGTACACA+TGG + chr2_2:40252404-40252423 Msa0251050:intron 30.0%
TCAGTTAGGTATGAGAATAA+AGG - chr2_2:40252609-40252628 None:intergenic 30.0%
TAAAAGATCAAGGACAGTTA+GGG - chr2_2:40252905-40252924 None:intergenic 30.0%
ATAAAAGATCAAGGACAGTT+AGG - chr2_2:40252906-40252925 None:intergenic 30.0%
! GATCTTTTATGTTAAAGCTG+TGG + chr2_2:40252916-40252935 Msa0251050:intron 30.0%
TATACACCATATTACCTAAG+TGG - chr2_2:40253095-40253114 None:intergenic 30.0%
CAAAAATTGTTGGAGAAAGA+GGG + chr2_2:40253144-40253163 Msa0251050:three_prime_UTR 30.0%
TGAACAGAATATTCTCTAGT+AGG + chr2_2:40253290-40253309 Msa0251050:three_prime_UTR 30.0%
GAACAGAATATTCTCTAGTA+GGG + chr2_2:40253291-40253310 Msa0251050:three_prime_UTR 30.0%
AACAGAATATTCTCTAGTAG+GGG + chr2_2:40253292-40253311 Msa0251050:three_prime_UTR 30.0%
GAAAAGTTTGTGGAAATGCA+TGG - chr2_2:40249190-40249209 None:intergenic 35.0%
!!! GTTGTTGTTTGTTTTGTTGG+TGG + chr2_2:40249532-40249551 Msa0251050:five_prime_UTR 35.0%
!!! TGTTGTTTGTTTTGTTGGTG+GGG + chr2_2:40249534-40249553 Msa0251050:five_prime_UTR 35.0%
! CATGCTTTTGCATTTGCATT+TGG + chr2_2:40249797-40249816 Msa0251050:five_prime_UTR 35.0%
! TGCATTTGGAGAAGCTTTAA+TGG + chr2_2:40249811-40249830 Msa0251050:exon 35.0%
! ATTTGGAGAAGCTTTAATGG+AGG + chr2_2:40249814-40249833 Msa0251050:exon 35.0%
! GCAGAAGCATAATCCAAAAT+TGG - chr2_2:40249840-40249859 None:intergenic 35.0%
TGGTTCAATTCAGAAACTTG+AGG + chr2_2:40249943-40249962 Msa0251050:CDS 35.0%
GAAAAAGTGACAGAGTGAAA+AGG - chr2_2:40250037-40250056 None:intergenic 35.0%
!!! TCACTCTGTCACTTTTTCAT+TGG + chr2_2:40250039-40250058 Msa0251050:intron 35.0%
!! AACTTTAGTTCTTGGGAGTT+GGG + chr2_2:40250125-40250144 Msa0251050:intron 35.0%
CAGTCAATAATATCTCCATC+AGG - chr2_2:40250360-40250379 None:intergenic 35.0%
! CCTTAATATGTCACTTGTTC+TGG - chr2_2:40250724-40250743 None:intergenic 35.0%
CCAGAACAAGTGACATATTA+AGG + chr2_2:40250721-40250740 Msa0251050:CDS 35.0%
!!! GCTAGCTCTGTTCAAAATTT+TGG + chr2_2:40250744-40250763 Msa0251050:CDS 35.0%
!! TAGTGACTTAAACTTGCTGT+AGG - chr2_2:40250880-40250899 None:intergenic 35.0%
!! TCATCCATGATTTGTTATGC+CGG + chr2_2:40250998-40251017 Msa0251050:intron 35.0%
AAAGGCAACCATAAACGTTT+GGG + chr2_2:40251272-40251291 Msa0251050:CDS 35.0%
TGAGACAGACTGAATTCATT+AGG - chr2_2:40251315-40251334 None:intergenic 35.0%
!! TCTCAAATTTGGATTTTGGC+TGG + chr2_2:40251330-40251349 Msa0251050:CDS 35.0%
!!! TTTTTTCACGGGTTGAAAGT+CGG - chr2_2:40251489-40251508 None:intergenic 35.0%
CCCGTGAAAAAAACAATCAT+TGG + chr2_2:40251497-40251516 Msa0251050:intron 35.0%
ATTGGGAGCTAAGAAAAGTA+CGG - chr2_2:40251523-40251542 None:intergenic 35.0%
! AAGGGAAATGGACTTCAATT+GGG - chr2_2:40251540-40251559 None:intergenic 35.0%
! GAGTTTTGCTTCTAACAATC+CGG - chr2_2:40251568-40251587 None:intergenic 35.0%
TTTCTGCTCTTGCAACAATT+AGG + chr2_2:40251664-40251683 Msa0251050:intron 35.0%
TATTGTCACCGTACAAATCA+GGG - chr2_2:40251694-40251713 None:intergenic 35.0%
TTATTGTCACCGTACAAATC+AGG - chr2_2:40251695-40251714 None:intergenic 35.0%
ACACTAGACTCTTCACTTAT+TGG + chr2_2:40251714-40251733 Msa0251050:CDS 35.0%
TGTTACAATCTCCTTTGTTC+TGG + chr2_2:40251868-40251887 Msa0251050:CDS 35.0%
ATTAACAATGGTATAGCCCT+TGG + chr2_2:40251901-40251920 Msa0251050:CDS 35.0%
ATATCCCCACTTTCTAACTA+TGG + chr2_2:40251931-40251950 Msa0251050:CDS 35.0%
AGAACCATAGTTAGAAAGTG+GGG - chr2_2:40251938-40251957 None:intergenic 35.0%
GAAGAACCATAGTTAGAAAG+TGG - chr2_2:40251940-40251959 None:intergenic 35.0%
ATGATATAAGCATCTTGGTC+TGG + chr2_2:40251965-40251984 Msa0251050:CDS 35.0%
TGTAGTGTTAGTTAAGTGTG+GGG - chr2_2:40252052-40252071 None:intergenic 35.0%
! AGTCAACAGCTTAGAAGTAT+TGG + chr2_2:40252266-40252285 Msa0251050:intron 35.0%
!! GCTGTTATTTCGTAAATGCA+TGG + chr2_2:40252366-40252385 Msa0251050:intron 35.0%
TTTGGAAATGACCATGTTCT+AGG + chr2_2:40252570-40252589 Msa0251050:CDS 35.0%
!! ATGACCATGTTCTAGGATAT+TGG + chr2_2:40252577-40252596 Msa0251050:CDS 35.0%
! CATTTTCCTGATGAAGGTTT+TGG + chr2_2:40252714-40252733 Msa0251050:CDS 35.0%
!! TTGATGGTGACAACAAGTTA+AGG + chr2_2:40252769-40252788 Msa0251050:CDS 35.0%
! TGATGGTGACAACAAGTTAA+GGG + chr2_2:40252770-40252789 Msa0251050:CDS 35.0%
! GTGTAAGTACCAAGATCTTT+TGG - chr2_2:40252798-40252817 None:intergenic 35.0%
!!! AAGCTGTGGTTTTAAATTGC+AGG + chr2_2:40252930-40252949 Msa0251050:intron 35.0%
TAAATTGCAATCCACAACTG+CGG - chr2_2:40252979-40252998 None:intergenic 35.0%
GAAGCTCAAAATTCTCATTG+AGG + chr2_2:40253117-40253136 Msa0251050:three_prime_UTR 35.0%
TTGAGGTCTCCAAAAATTGT+TGG + chr2_2:40253134-40253153 Msa0251050:three_prime_UTR 35.0%
! CCTCTTTCTCCAACAATTTT+TGG - chr2_2:40253146-40253165 None:intergenic 35.0%
CCAAAAATTGTTGGAGAAAG+AGG + chr2_2:40253143-40253162 Msa0251050:three_prime_UTR 35.0%
!! ACAGAGTTTGAGTTGAGTTG+AGG - chr2_2:40249128-40249147 None:intergenic 40.0%
AAGTTTGTGGAAATGCATGG+TGG - chr2_2:40249187-40249206 None:intergenic 40.0%
ACTGCCGACGATTGAAAAAA+GGG - chr2_2:40249254-40249273 None:intergenic 40.0%
TACTGCCGACGATTGAAAAA+AGG - chr2_2:40249255-40249274 None:intergenic 40.0%
TGTGGTTTGACACTTTGACA+AGG - chr2_2:40249356-40249375 None:intergenic 40.0%
TTGGGTTAAGGTTAAGCCTA+AGG + chr2_2:40249578-40249597 Msa0251050:five_prime_UTR 40.0%
! GCTTTAATGGAGGCCAATTT+TGG + chr2_2:40249824-40249843 Msa0251050:exon 40.0%
TGGATTATGCTTCTGCTTGT+TGG + chr2_2:40249844-40249863 Msa0251050:CDS 40.0%
!!! CTTCTGCTTGTTGGTTTTGT+TGG + chr2_2:40249853-40249872 Msa0251050:CDS 40.0%
!! TCTACCTTGATGGACTTAAC+AGG - chr2_2:40250001-40250020 None:intergenic 40.0%
!! GAACTTTAGTTCTTGGGAGT+TGG + chr2_2:40250124-40250143 Msa0251050:intron 40.0%
!! TCTTGTGATCTTTGAGGTCA+GGG - chr2_2:40250416-40250435 None:intergenic 40.0%
!! ATCTTGTGATCTTTGAGGTC+AGG - chr2_2:40250417-40250436 None:intergenic 40.0%
CCTGAATCTTGTGATCTTTG+AGG - chr2_2:40250422-40250441 None:intergenic 40.0%
CCTCAAAGATCACAAGATTC+AGG + chr2_2:40250419-40250438 Msa0251050:CDS 40.0%
TTCCCTTCTGGATGGAAATT+TGG - chr2_2:40250582-40250601 None:intergenic 40.0%
! CAAAAGTTTTCCCTTCTGGA+TGG - chr2_2:40250590-40250609 None:intergenic 40.0%
! CATCCAGAAGGGAAAACTTT+TGG + chr2_2:40250588-40250607 Msa0251050:CDS 40.0%
! TCTCCAAAAGTTTTCCCTTC+TGG - chr2_2:40250594-40250613 None:intergenic 40.0%
CAAAGCCTATAACTCAGCTT+TGG + chr2_2:40250652-40250671 Msa0251050:CDS 40.0%
TTCTGCCAAAGCTGAGTTAT+AGG - chr2_2:40250660-40250679 None:intergenic 40.0%
! ACTCAGCTTTGGCAGAAAAA+TGG + chr2_2:40250663-40250682 Msa0251050:CDS 40.0%
CTTGTTCTGGTCCTTCTTAT+AGG - chr2_2:40250711-40250730 None:intergenic 40.0%
ACTATAGCATGGAGATGCTT+TGG + chr2_2:40251136-40251155 Msa0251050:intron 40.0%
TTAGCATGCCATAGCTTATG+TGG + chr2_2:40251227-40251246 Msa0251050:intron 40.0%
AGGTGAATTCTATGGAGCAA+AGG + chr2_2:40251254-40251273 Msa0251050:CDS 40.0%
CAAAGGCAACCATAAACGTT+TGG + chr2_2:40251271-40251290 Msa0251050:CDS 40.0%
!! TTTTGGGTCCCAAACGTTTA+TGG - chr2_2:40251283-40251302 None:intergenic 40.0%
! ATCGATTCAACCTTAACTGG+AGG - chr2_2:40251457-40251476 None:intergenic 40.0%
CCAGTTAAGGTTGAATCGAT+CGG + chr2_2:40251457-40251476 Msa0251050:intron 40.0%
!! TTTTTCACGGGTTGAAAGTC+GGG - chr2_2:40251488-40251507 None:intergenic 40.0%
! CAAGGGAAATGGACTTCAAT+TGG - chr2_2:40251541-40251560 None:intergenic 40.0%
TCTAACAATCCGGTTCTCAA+GGG - chr2_2:40251558-40251577 None:intergenic 40.0%
TTCTAACAATCCGGTTCTCA+AGG - chr2_2:40251559-40251578 None:intergenic 40.0%
CAAAGTGGAGTGATTGCATT+GGG - chr2_2:40251750-40251769 None:intergenic 40.0%
ACAAAGTGGAGTGATTGCAT+TGG - chr2_2:40251751-40251770 None:intergenic 40.0%
AAGGAGATTGTAACAACCAG+TGG - chr2_2:40251863-40251882 None:intergenic 40.0%
TATAAGCATCTTGGTCTGGA+AGG + chr2_2:40251969-40251988 Msa0251050:CDS 40.0%
TAATGTGTAGGACCCAAAAG+AGG + chr2_2:40252530-40252549 Msa0251050:intron 40.0%
AATGTGTAGGACCCAAAAGA+GGG + chr2_2:40252531-40252550 Msa0251050:intron 40.0%
AGGTATGAGAATAAAGGAGC+TGG - chr2_2:40252603-40252622 None:intergenic 40.0%
! AGAGTGCCTCAATGATTGAA+TGG + chr2_2:40252628-40252647 Msa0251050:CDS 40.0%
GAGTGCCTCAATGATTGAAT+GGG + chr2_2:40252629-40252648 Msa0251050:CDS 40.0%
AGTGCCTCAATGATTGAATG+GGG + chr2_2:40252630-40252649 Msa0251050:CDS 40.0%
GTAGTGAATTCTGAGTCTGA+TGG + chr2_2:40252660-40252679 Msa0251050:CDS 40.0%
ACAGCACACATCAACACAAA+TGG + chr2_2:40252683-40252702 Msa0251050:CDS 40.0%
CAGCACACATCAACACAAAT+GGG + chr2_2:40252684-40252703 Msa0251050:CDS 40.0%
ACATCAACACAAATGGGAAG+TGG + chr2_2:40252690-40252709 Msa0251050:CDS 40.0%
! AGTGGACATTTTCCTGATGA+AGG + chr2_2:40252708-40252727 Msa0251050:CDS 40.0%
TTAAGGGCTCCAAAAGATCT+TGG + chr2_2:40252786-40252805 Msa0251050:CDS 40.0%
! AATGTCAAAACTGGTAGTGC+TGG + chr2_2:40252837-40252856 Msa0251050:CDS 40.0%
CTACTTCTATTATGGTGGTC+CGG + chr2_2:40252872-40252891 Msa0251050:CDS 40.0%
TACTTCTATTATGGTGGTCC+GGG + chr2_2:40252873-40252892 Msa0251050:CDS 40.0%
TAAATGCGGTTGCAATATCG+TGG + chr2_2:40252953-40252972 Msa0251050:intron 40.0%
! TGTAAGTTGAGCTACCACTT+AGG + chr2_2:40253078-40253097 Msa0251050:three_prime_UTR 40.0%
GAGCTACCACTTAGGTAATA+TGG + chr2_2:40253086-40253105 Msa0251050:three_prime_UTR 40.0%
! TTTTTGTCTGCTCCTATCTC+TGG + chr2_2:40253239-40253258 Msa0251050:three_prime_UTR 40.0%
TCTCTACACACTGTGAGTAG+TGG + chr2_2:40249100-40249119 Msa0251050:five_prime_UTR 45.0%
TTTGTGGAAATGCATGGTGG+TGG - chr2_2:40249184-40249203 None:intergenic 45.0%
TTGGTTCCTTTCACTTGTGC+TGG + chr2_2:40249872-40249891 Msa0251050:CDS 45.0%
!! ACCTTGATGGACTTAACAGG+CGG - chr2_2:40249998-40250017 None:intergenic 45.0%
TTGTGAAAGCAGAGTCCTGA+TGG + chr2_2:40250342-40250361 Msa0251050:intron 45.0%
ATGGGTTTGTGATGCAGATG+AGG + chr2_2:40250556-40250575 Msa0251050:intron 45.0%
AGGCCAAATTTCCATCCAGA+AGG + chr2_2:40250576-40250595 Msa0251050:CDS 45.0%
GGCCAAATTTCCATCCAGAA+GGG + chr2_2:40250577-40250596 Msa0251050:CDS 45.0%
!!! GGTTTTGCAGGTTTTGGTTG+AGG - chr2_2:40250792-40250811 None:intergenic 45.0%
! GGTAGAGGTTTTGCAGGTTT+TGG - chr2_2:40250798-40250817 None:intergenic 45.0%
! ATGTCAGGTAGAGGTTTTGC+AGG - chr2_2:40250804-40250823 None:intergenic 45.0%
TGAGTCAAGATGTCAGGTAG+AGG - chr2_2:40250813-40250832 None:intergenic 45.0%
TGGACCGGCATAACAAATCA+TGG - chr2_2:40251005-40251024 None:intergenic 45.0%
AAAAAAGGACCAGACCTCTG+TGG - chr2_2:40251101-40251120 None:intergenic 45.0%
CATGCCATAGCTTATGTGGA+GGG + chr2_2:40251231-40251250 Msa0251050:CDS 45.0%
GCTGTTGAGATCTTGACCAA+AGG - chr2_2:40251358-40251377 None:intergenic 45.0%
! GATCTCAACAGCATTGAAGC+AGG + chr2_2:40251366-40251385 Msa0251050:CDS 45.0%
TGGTTAATGGCCTCCAGTTA+AGG + chr2_2:40251444-40251463 Msa0251050:intron 45.0%
! CCGATCGATTCAACCTTAAC+TGG - chr2_2:40251460-40251479 None:intergenic 45.0%
AGTCCATTTCCCTTGAGAAC+CGG + chr2_2:40251546-40251565 Msa0251050:intron 45.0%
AATCCGGTTCTCAAGGGAAA+TGG - chr2_2:40251552-40251571 None:intergenic 45.0%
! TAGGTCAGCCCTGATTTGTA+CGG + chr2_2:40251683-40251702 Msa0251050:intron 45.0%
AGTGATGCATATCAAGCCAC+TGG + chr2_2:40251844-40251863 Msa0251050:CDS 45.0%
TGGGGATATACTTGCTCCAA+GGG - chr2_2:40251920-40251939 None:intergenic 45.0%
AATTTGACATCGGAGTCGTC+TGG + chr2_2:40252323-40252342 Msa0251050:intron 45.0%
! TCCACCAGTTTCCCTCTTTT+GGG - chr2_2:40252545-40252564 None:intergenic 45.0%
! ATCCACCAGTTTCCCTCTTT+TGG - chr2_2:40252546-40252565 None:intergenic 45.0%
! GGAAACTGGTGGATGCAATT+TGG + chr2_2:40252552-40252571 Msa0251050:CDS 45.0%
CTGGCCAATATCCTAGAACA+TGG - chr2_2:40252584-40252603 None:intergenic 45.0%
! TCATTGAGGCACTCTCAGTT+AGG - chr2_2:40252623-40252642 None:intergenic 45.0%
ACCACCCCATTCAATCATTG+AGG - chr2_2:40252637-40252656 None:intergenic 45.0%
!! TCCTGATGAAGGTTTTGGCA+AGG + chr2_2:40252719-40252738 Msa0251050:CDS 45.0%
!! AAACTGGTAGTGCTGGTGAT+TGG + chr2_2:40252844-40252863 Msa0251050:CDS 45.0%
!! AACTGGTAGTGCTGGTGATT+GGG + chr2_2:40252845-40252864 Msa0251050:CDS 45.0%
! TGGGGCACCTACTTCTATTA+TGG + chr2_2:40252864-40252883 Msa0251050:CDS 45.0%
GGCACCTACTTCTATTATGG+TGG + chr2_2:40252867-40252886 Msa0251050:CDS 45.0%
CGGACCACCATAATAGAAGT+AGG - chr2_2:40252874-40252893 None:intergenic 45.0%
TTGTTGGAGAAAGAGGGTGA+TGG + chr2_2:40253150-40253169 Msa0251050:three_prime_UTR 45.0%
TGTTGGAGAAAGAGGGTGAT+GGG + chr2_2:40253151-40253170 Msa0251050:three_prime_UTR 45.0%
!!! AAAAAATAACATTTTAAAAA+GGG - chr2_2:40252000-40252019 None:intergenic 5.0%
!! AAAAAAATATAAAAAAAACT+AGG + chr2_2:40253026-40253045 Msa0251050:three_prime_UTR 5.0%
!! AAAAAATATAAAAAAAACTA+GGG + chr2_2:40253027-40253046 Msa0251050:three_prime_UTR 5.0%
!!! ATATGTATATTTATTTATTT+TGG + chr2_2:40253325-40253344 Msa0251050:three_prime_UTR 5.0%
!! GTTTTGTTGGTGGGGTGCAT+AGG + chr2_2:40249542-40249561 Msa0251050:five_prime_UTR 50.0%
ACCGCCTGTTAAGTCCATCA+AGG + chr2_2:40249994-40250013 Msa0251050:CDS 50.0%
CAGGGTGATCAAAAGCTGGT+TGG - chr2_2:40250398-40250417 None:intergenic 50.0%
AGGTCAGGGTGATCAAAAGC+TGG - chr2_2:40250402-40250421 None:intergenic 50.0%
CCACTCTGAGTCAAGATGTC+AGG - chr2_2:40250819-40250838 None:intergenic 50.0%
CCTGACATCTTGACTCAGAG+TGG + chr2_2:40250816-40250835 Msa0251050:CDS 50.0%
CTTGACTCAGAGTGGTCATC+AGG + chr2_2:40250824-40250843 Msa0251050:CDS 50.0%
!! ATGACTTGTTCACGCCACAG+AGG + chr2_2:40251084-40251103 Msa0251050:intron 50.0%
GCATGCCATAGCTTATGTGG+AGG + chr2_2:40251230-40251249 Msa0251050:intron 50.0%
ACCTCCCTCCACATAAGCTA+TGG - chr2_2:40251238-40251257 None:intergenic 50.0%
GTGGAGGGAGGTGAATTCTA+TGG + chr2_2:40251246-40251265 Msa0251050:CDS 50.0%
!!! TGGATTTTGGCTGGTGCCTT+TGG + chr2_2:40251339-40251358 Msa0251050:CDS 50.0%
! TCAACAGCATTGAAGCAGGC+TGG + chr2_2:40251370-40251389 Msa0251050:CDS 50.0%
GTGGGGATATACTTGCTCCA+AGG - chr2_2:40251921-40251940 None:intergenic 50.0%
TGCATGGAATCTATGACGGC+AGG + chr2_2:40252382-40252401 Msa0251050:intron 50.0%
AGGACCCAAAAGAGGGAAAC+TGG + chr2_2:40252538-40252557 Msa0251050:intron 50.0%
ACCCAAAAGAGGGAAACTGG+TGG + chr2_2:40252541-40252560 Msa0251050:CDS 50.0%
GCCTCAATGATTGAATGGGG+TGG + chr2_2:40252633-40252652 Msa0251050:CDS 50.0%
GCCTTGCCAAAACCTTCATC+AGG - chr2_2:40252723-40252742 None:intergenic 50.0%
!! ACTGGTAGTGCTGGTGATTG+GGG + chr2_2:40252846-40252865 Msa0251050:CDS 50.0%
GCTTTCACAGCTCCAGAGAT+AGG - chr2_2:40253254-40253273 None:intergenic 50.0%
!! ATCTCTGGAGCTGTGAAAGC+TGG + chr2_2:40253254-40253273 Msa0251050:three_prime_UTR 50.0%
GCTCTGCCAGCACAAGTGAA+AGG - chr2_2:40249881-40249900 None:intergenic 55.0%
TTGTTCACGCCACAGAGGTC+TGG + chr2_2:40251089-40251108 Msa0251050:intron 55.0%
GCCATAGCTTATGTGGAGGG+AGG + chr2_2:40251234-40251253 Msa0251050:CDS 55.0%
GGACAGTTAGGGTTTCGACC+CGG - chr2_2:40252894-40252913 None:intergenic 55.0%
CAATATCGTGGCCGCAGTTG+TGG + chr2_2:40252965-40252984 Msa0251050:intron 55.0%
! TCTGGAGCTGTGAAAGCTGG+TGG + chr2_2:40253257-40253276 Msa0251050:three_prime_UTR 55.0%
CTGGAGCTGTGAAAGCTGGT+GGG + chr2_2:40253258-40253277 Msa0251050:three_prime_UTR 55.0%
ATCAGCACCACCACCGGGAA+CGG + chr2_2:40249905-40249924 Msa0251050:CDS 60.0%
! CAGCATTGAAGCAGGCTGGC+AGG + chr2_2:40251374-40251393 Msa0251050:CDS 60.0%
GCCACCATCAGCACCACCAC+CGG + chr2_2:40249899-40249918 Msa0251050:CDS 65.0%
CCACCATCAGCACCACCACC+GGG + chr2_2:40249900-40249919 Msa0251050:CDS 65.0%
! GTTCCCGGTGGTGGTGCTGA+TGG - chr2_2:40249906-40249925 None:intergenic 65.0%
GCTCTCACCACCACCGTTCC+CGG - chr2_2:40249921-40249940 None:intergenic 65.0%
! GGGAACGGTGGTGGTGAGAG+CGG + chr2_2:40249920-40249939 Msa0251050:CDS 65.0%
! AACGGTGGTGGTGAGAGCGG+TGG + chr2_2:40249923-40249942 Msa0251050:CDS 65.0%
!! CCCGGTGGTGGTGCTGATGG+TGG - chr2_2:40249903-40249922 None:intergenic 70.0%
AGCACCACCACCGGGAACGG+TGG + chr2_2:40249908-40249927 Msa0251050:CDS 70.0%
ACCACCACCGGGAACGGTGG+TGG + chr2_2:40249911-40249930 Msa0251050:CDS 70.0%
ACCACCACCGTTCCCGGTGG+TGG - chr2_2:40249915-40249934 None:intergenic 70.0%
CTCACCACCACCGTTCCCGG+TGG - chr2_2:40249918-40249937 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 40249072 40253402 40249072 ID=Msa0251050;Name=Msa0251050
chr2_2 mRNA 40249072 40253402 40249072 ID=Msa0251050-mRNA-1;Parent=Msa0251050;Name=Msa0251050-mRNA-1;_AED=0.07;_eAED=0.07;_QI=658|1|1|1|0.75|0.55|9|416|429
chr2_2 exon 40249072 40249399 40249072 ID=Msa0251050-mRNA-1:exon:12508;Parent=Msa0251050-mRNA-1
chr2_2 exon 40249500 40250015 40249500 ID=Msa0251050-mRNA-1:exon:12509;Parent=Msa0251050-mRNA-1
chr2_2 exon 40250354 40250440 40250354 ID=Msa0251050-mRNA-1:exon:12510;Parent=Msa0251050-mRNA-1
chr2_2 exon 40250573 40250845 40250573 ID=Msa0251050-mRNA-1:exon:12511;Parent=Msa0251050-mRNA-1
chr2_2 exon 40251231 40251395 40251231 ID=Msa0251050-mRNA-1:exon:12512;Parent=Msa0251050-mRNA-1
chr2_2 exon 40251686 40251739 40251686 ID=Msa0251050-mRNA-1:exon:12513;Parent=Msa0251050-mRNA-1
chr2_2 exon 40251844 40251990 40251844 ID=Msa0251050-mRNA-1:exon:12514;Parent=Msa0251050-mRNA-1
chr2_2 exon 40252540 40252926 40252540 ID=Msa0251050-mRNA-1:exon:12515;Parent=Msa0251050-mRNA-1
chr2_2 exon 40252996 40253402 40252996 ID=Msa0251050-mRNA-1:exon:12516;Parent=Msa0251050-mRNA-1
chr2_2 five_prime_UTR 40249072 40249399 40249072 ID=Msa0251050-mRNA-1:five_prime_utr;Parent=Msa0251050-mRNA-1
chr2_2 five_prime_UTR 40249500 40249829 40249500 ID=Msa0251050-mRNA-1:five_prime_utr;Parent=Msa0251050-mRNA-1
chr2_2 CDS 40249830 40250015 40249830 ID=Msa0251050-mRNA-1:cds;Parent=Msa0251050-mRNA-1
chr2_2 CDS 40250354 40250440 40250354 ID=Msa0251050-mRNA-1:cds;Parent=Msa0251050-mRNA-1
chr2_2 CDS 40250573 40250845 40250573 ID=Msa0251050-mRNA-1:cds;Parent=Msa0251050-mRNA-1
chr2_2 CDS 40251231 40251395 40251231 ID=Msa0251050-mRNA-1:cds;Parent=Msa0251050-mRNA-1
chr2_2 CDS 40251686 40251739 40251686 ID=Msa0251050-mRNA-1:cds;Parent=Msa0251050-mRNA-1
chr2_2 CDS 40251844 40251990 40251844 ID=Msa0251050-mRNA-1:cds;Parent=Msa0251050-mRNA-1
chr2_2 CDS 40252540 40252917 40252540 ID=Msa0251050-mRNA-1:cds;Parent=Msa0251050-mRNA-1
chr2_2 three_prime_UTR 40252918 40252926 40252918 ID=Msa0251050-mRNA-1:three_prime_utr;Parent=Msa0251050-mRNA-1
chr2_2 three_prime_UTR 40252996 40253402 40252996 ID=Msa0251050-mRNA-1:three_prime_utr;Parent=Msa0251050-mRNA-1
Gene Sequence

>Msa0251050

ATGGAGGCCAATTTTGGATTATGCTTCTGCTTGTTGGTTTTGTTGGTTCCTTTCACTTGTGCTGGCAGAGCCACCATCAGCACCACCACCGGGAACGGTGGTGGTGAGAGCGGTGGTTCAATTCAGAAACTTGAGGTTAAGAAGCACTTGAAGAATTTGAACAGACCGCCTGTTAAGTCCATCAAGAGTCCTGATGGAGATATTATTGACTGTGTTCATGTTTCACACCAACCAGCTTTTGATCACCCTGACCTCAAAGATCACAAGATTCAGATGAGGCCAAATTTCCATCCAGAAGGGAAAACTTTTGGAGAGAGCAAAGTCTCTTCAACTTCAAATTCAAATTCAAATTCAAAGCCTATAACTCAGCTTTGGCAGAAAAATGGTATGTGTTCTGAAGGAACAATTCCTATAAGAAGGACCAGAACAAGTGACATATTAAGGGCTAGCTCTGTTCAAAATTTTGGAAAGAAGAAGCATAAAAGTACTCCTCAACCAAAACCTGCAAAACCTCTACCTGACATCTTGACTCAGAGTGGTCATCAGCATGCCATAGCTTATGTGGAGGGAGGTGAATTCTATGGAGCAAAGGCAACCATAAACGTTTGGGACCCAAAAATTCAACAACCTAATGAATTCAGTCTGTCTCAAATTTGGATTTTGGCTGGTGCCTTTGGTCAAGATCTCAACAGCATTGAAGCAGGCTGGCAGGTCAGCCCTGATTTGTACGGTGACAATAACACTAGACTCTTCACTTATTGGACAAGTGATGCATATCAAGCCACTGGTTGTTACAATCTCCTTTGTTCTGGCTTTATTCAAATTAACAATGGTATAGCCCTTGGAGCAAGTATATCCCCACTTTCTAACTATGGTTCTTCCCAATATGATATAAGCATCTTGGTCTGGAAGGACCCAAAAGAGGGAAACTGGTGGATGCAATTTGGAAATGACCATGTTCTAGGATATTGGCCAGCTCCTTTATTCTCATACCTAACTGAGAGTGCCTCAATGATTGAATGGGGTGGTGAAGTAGTGAATTCTGAGTCTGATGGACAGCACACATCAACACAAATGGGAAGTGGACATTTTCCTGATGAAGGTTTTGGCAAGGCTAGTTATTTCAAAAATATTCAGGTTGTTGATGGTGACAACAAGTTAAGGGCTCCAAAAGATCTTGGTACTTACACTGAAAAAGATAACTGTTATAATGTCAAAACTGGTAGTGCTGGTGATTGGGGCACCTACTTCTATTATGGTGGTCCGGGTCGAAACCCTAACTGTCCTTGA
Protein sequence

>Msa0251050

MEANFGLCFCLLVLLVPFTCAGRATISTTTGNGGGESGGSIQKLEVKKHLKNLNRPPVKSIKSPDGDIIDCVHVSHQPAFDHPDLKDHKIQMRPNFHPEGKTFGESKVSSTSNSNSNSKPITQLWQKNGMCSEGTIPIRRTRTSDILRASSVQNFGKKKHKSTPQPKPAKPLPDILTQSGHQHAIAYVEGGEFYGAKATINVWDPKIQQPNEFSLSQIWILAGAFGQDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINNGIALGASISPLSNYGSSQYDISILVWKDPKEGNWWMQFGNDHVLGYWPAPLFSYLTESASMIEWGGEVVNSESDGQHTSTQMGSGHFPDEGFGKASYFKNIQVVDGDNKLRAPKDLGTYTEKDNCYNVKTGSAGDWGTYFYYGGPGRNPNCP*