AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0433610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0433610 MtrunA17_Chr3g0139111 99.286 280 1 1 1 280 1 279 0.0 582
Msa0433610 MtrunA17_Chr8g0344491 73.684 247 59 3 30 275 34 275 4.20e-135 389
Msa0433610 MtrunA17_Chr4g0070231 64.286 266 90 2 15 280 4 264 7.26e-131 377
Msa0433610 MtrunA17_Chr2g0288251 32.645 242 133 7 52 280 49 273 1.77e-29 115
Msa0433610 MtrunA17_Chr2g0288251 24.725 182 110 4 62 222 156 331 1.38e-11 64.3
Msa0433610 MtrunA17_Chr4g0074711 29.960 247 146 7 44 280 57 286 2.93e-28 112
Msa0433610 MtrunA17_Chr4g0074711 24.870 193 117 5 56 226 162 348 1.59e-11 64.3
Msa0433610 MtrunA17_Chr3g0110211 31.915 188 117 4 62 240 26 211 6.10e-28 110
Msa0433610 MtrunA17_Chr4g0045221 32.911 237 138 7 60 280 115 346 1.04e-27 111
Msa0433610 MtrunA17_Chr3g0133651 30.172 232 134 5 54 275 86 299 1.72e-26 107
Msa0433610 MtrunA17_Chr3g0133651 25.405 185 112 5 62 226 188 366 7.83e-11 62.4
Msa0433610 MtrunA17_Chr1g0153871 29.694 229 134 5 61 280 97 307 8.56e-26 105
Msa0433610 MtrunA17_Chr1g0153871 25.389 193 118 4 54 226 183 369 5.97e-13 68.6
Msa0433610 MtrunA17_Chr2g0328791 31.330 233 148 6 60 280 14 246 1.02e-25 105
Msa0433610 MtrunA17_Chr1g0153181 27.528 178 122 4 45 217 15 190 1.52e-17 82.8
Msa0433610 MtrunA17_Chr1g0153181 27.660 188 125 4 53 234 112 294 1.02e-13 71.2
Msa0433610 MtrunA17_Chr1g0153181 26.374 182 114 4 62 224 212 392 4.50e-13 69.3
Msa0433610 MtrunA17_Chr4g0044541 30.000 160 106 3 62 217 35 192 1.56e-17 82.8
Msa0433610 MtrunA17_Chr4g0044541 28.922 204 129 4 36 224 88 290 6.25e-15 74.7
Msa0433610 MtrunA17_Chr4g0044541 26.203 187 119 3 56 224 208 393 4.84e-14 72.0
Msa0433610 MtrunA17_Chr3g0134141 28.125 160 109 3 62 217 25 182 1.75e-17 82.4
Msa0433610 MtrunA17_Chr3g0134141 28.922 204 129 5 36 224 78 280 4.42e-12 66.2
Msa0433610 MtrunA17_Chr3g0134141 25.967 181 115 4 62 224 204 383 1.46e-11 64.7
Msa0433610 MtrunA17_Chr7g0265341 30.114 176 112 5 47 217 59 228 2.69e-17 82.0
Msa0433610 MtrunA17_Chr7g0265341 26.667 180 113 3 63 224 251 429 4.21e-13 69.3
Msa0433610 MtrunA17_Chr7g0265341 28.962 183 117 6 53 226 150 328 2.21e-11 64.3
Msa0433610 MtrunA17_Chr6g0465751 26.946 167 116 3 62 224 26 190 6.98e-17 80.5
Msa0433610 MtrunA17_Chr6g0465751 29.121 182 109 4 62 224 201 381 7.81e-17 80.5
Msa0433610 MtrunA17_Chr0c09g0493511 28.571 182 110 4 62 224 119 299 9.46e-17 80.1
Msa0433610 MtrunA17_Chr0c09g0493511 27.950 161 109 4 53 209 23 180 2.58e-12 67.0
Msa0433610 MtrunA17_Chr3g0116631 29.651 172 109 2 63 222 111 282 9.80e-17 78.6
Msa0433610 MtrunA17_Chr6g0465691 29.121 182 109 4 62 224 119 299 1.81e-16 79.3
Msa0433610 MtrunA17_Chr6g0465691 28.571 161 108 4 53 209 23 180 6.57e-12 65.9
Msa0433610 MtrunA17_Chr6g0466501 29.121 182 109 4 62 224 201 381 2.29e-16 79.0
Msa0433610 MtrunA17_Chr6g0466501 26.347 167 117 3 62 224 26 190 4.48e-16 78.2
Msa0433610 MtrunA17_Chr4g0058151 28.824 170 110 3 63 222 124 292 1.19e-15 75.5
Msa0433610 MtrunA17_Chr6g0465631 29.714 175 103 5 62 217 106 279 2.10e-15 76.3
Msa0433610 MtrunA17_Chr6g0465631 28.889 180 114 5 53 219 7 185 5.68e-14 72.0
Msa0433610 MtrunA17_Chr6g0466451 29.714 175 103 5 62 217 106 279 2.14e-15 76.3
Msa0433610 MtrunA17_Chr6g0466451 28.889 180 114 5 53 219 7 185 5.68e-14 72.0
Msa0433610 MtrunA17_Chr3g0087481 27.624 181 117 2 56 222 55 235 8.70e-15 72.0
Msa0433610 MtrunA17_Chr1g0190211 41.892 74 43 0 146 219 132 205 1.01e-14 72.0
Msa0433610 MtrunA17_Chr1g0177101 23.558 208 145 2 56 249 103 310 3.51e-14 71.6
Msa0433610 MtrunA17_Chr1g0201151 26.316 171 119 3 53 217 110 279 7.72e-14 71.6
Msa0433610 MtrunA17_Chr1g0201151 28.571 175 105 4 62 217 210 383 1.26e-13 70.9
Msa0433610 MtrunA17_Chr1g0201151 24.887 221 130 7 59 275 28 216 6.91e-12 65.9
Msa0433610 MtrunA17_Chr1g0181111 27.604 192 112 2 58 222 81 272 9.64e-14 70.1
Msa0433610 MtrunA17_Chr7g0267571 25.281 178 115 2 63 222 111 288 1.86e-13 69.3
Msa0433610 MtrunA17_Chr1g0179701 27.273 165 114 3 57 217 58 220 2.70e-13 69.7
Msa0433610 MtrunA17_Chr1g0179701 27.933 179 118 5 56 224 141 318 7.78e-12 65.5
Msa0433610 MtrunA17_Chr1g0179701 40.506 79 47 0 148 226 64 142 7.34e-11 62.4
Msa0433610 MtrunA17_Chr1g0179701 28.495 186 117 4 53 224 234 417 7.69e-11 62.4
Msa0433610 MtrunA17_Chr1g0168601 30.400 125 85 1 100 222 105 229 1.30e-12 65.9
Msa0433610 MtrunA17_Chr7g0219021 37.975 79 49 0 148 226 42 120 1.61e-12 66.2
Msa0433610 MtrunA17_Chr3g0121631 42.667 75 42 1 148 222 38 111 2.94e-12 63.2
Msa0433610 MtrunA17_Chr4g0061451 37.662 77 48 0 148 224 44 120 3.19e-12 65.5
Msa0433610 MtrunA17_Chr7g0266751 40.260 77 46 0 146 222 32 108 4.22e-12 62.8
Msa0433610 MtrunA17_Chr3g0119311 37.037 81 51 0 148 228 38 118 1.67e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0433610 AT1G17370.1 68.924 251 74 2 30 280 26 272 4.24e-129 374
Msa0433610 AT1G17370.2 68.526 251 72 3 30 280 26 269 1.33e-126 367
Msa0433610 AT1G54080.1 64.615 260 88 2 21 280 26 281 3.82e-126 366
Msa0433610 AT1G54080.2 63.636 264 88 3 21 280 26 285 8.22e-124 360
Msa0433610 AT3G14100.1 66.667 252 78 3 30 280 31 277 1.22e-123 360
Msa0433610 AT2G18510.1 33.333 168 105 3 62 224 26 191 5.20e-28 111
Msa0433610 AT5G19350.1 29.694 229 151 5 60 280 23 249 1.40e-27 110
Msa0433610 AT4G27000.1 31.646 237 134 8 53 280 73 290 1.77e-27 110
Msa0433610 AT5G19350.2 29.694 229 147 5 60 280 23 245 4.38e-27 109
Msa0433610 AT3G19130.1 31.897 232 140 7 60 279 107 332 3.45e-26 107
Msa0433610 AT1G49600.3 31.169 231 140 8 60 280 118 339 1.22e-25 105
Msa0433610 AT1G49600.2 31.169 231 140 8 60 280 118 339 1.22e-25 105
Msa0433610 AT1G49600.1 31.169 231 140 8 60 280 118 339 2.57e-25 104
Msa0433610 AT1G49600.1 27.885 208 110 9 62 240 214 410 3.89e-11 63.5
Msa0433610 AT1G11650.1 28.216 241 144 6 47 275 45 268 1.40e-24 100
Msa0433610 AT1G11650.2 27.897 233 142 5 57 280 58 273 4.87e-24 100
Msa0433610 AT5G54900.1 30.450 289 157 10 2 280 18 272 1.65e-22 96.3
Msa0433610 AT1G47490.2 31.429 175 108 5 61 223 101 275 9.19e-20 87.8
Msa0433610 AT1G47490.1 29.075 227 133 7 61 275 101 311 1.28e-19 88.6
Msa0433610 AT4G24770.1 31.579 171 108 2 63 224 152 322 1.75e-19 87.0
Msa0433610 AT4G24770.2 31.579 171 108 2 63 224 152 322 1.75e-19 87.0
Msa0433610 AT2G37220.1 31.088 193 105 2 58 222 88 280 1.86e-19 86.7
Msa0433610 AT3G16380.1 33.533 167 105 3 63 224 114 279 4.23e-19 87.4
Msa0433610 AT3G16380.1 26.543 162 111 3 62 217 22 181 3.46e-12 67.0
Msa0433610 AT3G16380.1 28.488 172 105 4 63 217 204 374 1.11e-11 65.5
Msa0433610 AT1G47500.2 31.429 175 108 5 61 223 103 277 4.91e-19 85.9
Msa0433610 AT1G47500.1 31.429 175 108 5 61 223 103 277 5.20e-19 87.0
Msa0433610 AT4G34110.1 31.250 160 104 3 62 217 37 194 1.05e-18 86.7
Msa0433610 AT4G34110.1 29.213 178 119 3 53 224 116 292 2.52e-15 76.3
Msa0433610 AT4G34110.1 26.667 180 113 3 63 224 217 395 5.77e-14 72.4
Msa0433610 AT1G71770.1 25.225 222 133 5 62 280 60 251 4.44e-18 84.7
Msa0433610 AT1G71770.1 29.381 194 125 4 50 235 135 324 1.05e-14 74.7
Msa0433610 AT1G71770.1 26.519 181 114 4 62 224 240 419 7.18e-14 72.0
Msa0433610 AT1G71770.2 25.225 222 133 5 62 280 60 251 4.44e-18 84.7
Msa0433610 AT1G71770.2 29.381 194 125 4 50 235 135 324 1.05e-14 74.7
Msa0433610 AT1G71770.2 26.519 181 114 4 62 224 240 419 7.18e-14 72.0
Msa0433610 AT1G22760.1 24.887 221 133 6 62 279 50 240 5.96e-18 84.3
Msa0433610 AT1G22760.1 28.351 194 127 4 50 235 125 314 5.22e-14 72.4
Msa0433610 AT1G22760.1 25.414 181 116 3 62 224 230 409 1.41e-12 68.2
Msa0433610 AT1G49760.1 31.250 160 104 3 62 217 46 203 1.74e-17 82.8
Msa0433610 AT1G49760.1 29.885 174 107 5 53 216 125 293 3.47e-16 79.0
Msa0433610 AT1G49760.1 28.729 181 110 3 62 224 225 404 2.36e-15 76.6
Msa0433610 AT1G49760.2 31.250 160 104 3 62 217 46 203 1.74e-17 82.8
Msa0433610 AT1G49760.2 29.885 174 107 5 53 216 125 293 3.47e-16 79.0
Msa0433610 AT1G49760.2 28.729 181 110 3 62 224 225 404 2.36e-15 76.6
Msa0433610 AT5G50250.1 30.178 169 109 2 63 222 115 283 6.96e-17 79.3
Msa0433610 AT2G23350.1 30.964 197 121 5 62 252 135 322 1.47e-16 80.1
Msa0433610 AT2G23350.1 33.129 163 103 3 59 217 44 204 4.69e-16 78.6
Msa0433610 AT2G23350.1 28.342 187 115 4 56 224 220 405 8.84e-15 74.7
Msa0433610 AT1G60000.1 31.461 178 112 4 52 222 79 253 5.61e-16 76.3
Msa0433610 AT2G36660.1 28.708 209 131 6 62 262 25 223 1.79e-15 77.0
Msa0433610 AT3G04500.1 43.243 74 42 0 146 219 137 210 5.49e-15 73.2
Msa0433610 AT3G52380.1 25.556 180 116 2 63 224 118 297 1.42e-14 73.2
Msa0433610 AT3G52150.2 28.000 200 125 5 39 222 57 253 1.59e-14 72.0
Msa0433610 AT3G52150.1 28.000 200 125 5 39 222 57 253 1.59e-14 72.0
Msa0433610 AT3G23830.2 45.455 77 42 0 148 224 37 113 1.69e-14 69.7
Msa0433610 AT3G23830.1 45.455 77 42 0 148 224 37 113 1.69e-14 69.7
Msa0433610 AT4G13860.1 45.714 70 38 0 148 217 5 74 4.28e-14 67.0
Msa0433610 AT4G13850.4 45.333 75 41 0 148 222 37 111 8.52e-14 67.4
Msa0433610 AT4G13850.3 45.333 75 41 0 148 222 37 111 9.71e-14 67.8
Msa0433610 AT4G13850.2 45.333 75 41 0 148 222 37 111 1.18e-13 67.8
Msa0433610 AT4G13850.1 45.333 75 41 0 148 222 37 111 1.32e-13 67.8
Msa0433610 AT5G04280.1 42.105 76 44 0 147 222 8 83 6.05e-13 68.2
Msa0433610 AT1G34140.1 28.333 180 109 4 62 222 120 298 6.78e-13 68.9
Msa0433610 AT4G39260.3 38.095 84 51 1 146 228 6 89 3.77e-12 61.6
Msa0433610 AT1G76460.1 42.553 94 52 2 132 225 11 102 5.92e-12 65.1
Msa0433610 AT1G60650.2 38.554 83 51 0 147 229 13 95 2.50e-11 63.5
Msa0433610 AT1G60650.1 38.554 83 51 0 147 229 13 95 2.50e-11 63.5
Msa0433610 AT1G20880.2 42.105 95 53 2 131 225 10 102 2.85e-11 63.2
Msa0433610 AT1G20880.3 42.105 95 53 2 131 225 10 102 2.85e-11 63.2
Msa0433610 AT1G20880.1 42.105 95 53 2 131 225 10 102 2.85e-11 63.2
Msa0433610 AT3G53460.1 42.667 75 43 0 148 222 259 333 7.36e-11 62.4
Msa0433610 AT3G53460.3 42.667 75 43 0 148 222 259 333 7.36e-11 62.4
Msa0433610 AT3G53460.2 42.667 75 43 0 148 222 259 333 7.36e-11 62.4
Msa0433610 AT3G53460.4 42.667 75 43 0 148 222 280 354 9.56e-11 62.0

Find 93 sgRNAs with CRISPR-Local

Find 476 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAGTGCTGGCCCTCTTGC+TGG 0.169521 3_2:-86060241 Msa0433610:CDS
CTAACCTGTCATATCATTTA+TGG 0.221069 3_2:+86057591 None:intergenic
GATTGACATACATTGGAAAA+TGG 0.257034 3_2:-86062113 Msa0433610:five_prime_UTR
TACATTGGAAAATGGGGATT+TGG 0.268774 3_2:-86062105 Msa0433610:five_prime_UTR
CATATCATTTATGGCACTTT+GGG 0.283299 3_2:+86057600 None:intergenic
GCAAATTTCCACACACCATT+TGG 0.296275 3_2:-86062042 Msa0433610:five_prime_UTR
TAGTGAGTACAACAGCATTT+TGG 0.310047 3_2:+86057374 None:intergenic
GTCAAGCACTAAAGGTGAAT+TGG 0.319354 3_2:-86058412 Msa0433610:CDS
TTACTGTTACAGTCCTCTTA+TGG 0.325857 3_2:-86058802 Msa0433610:intron
TCATGCGCCGTGCAGGTAAA+TGG 0.340073 3_2:-86057477 Msa0433610:intron
ACTGGTCGCTCAAAAGGATA+TGG 0.356544 3_2:-86057899 Msa0433610:CDS
TTGAAGTGGTTGTTGGTGAT+TGG 0.368909 3_2:+86061988 None:intergenic
CAAATTTCCACACACCATTT+GGG 0.376222 3_2:-86062041 Msa0433610:five_prime_UTR
AATGCTGTTGTACTCACTAA+TGG 0.376531 3_2:-86057370 Msa0433610:CDS
CAGGTAAATGGCTGGGAAAT+AGG 0.380298 3_2:-86057465 Msa0433610:CDS
GCGGCAGCGGCGAGCATGCC+AGG 0.380318 3_2:+86061701 None:intergenic
GTTATTATGTGGGATTGGTT+TGG 0.383651 3_2:-86055340 Msa0433610:CDS
ACATTGGAAAATGGGGATTT+GGG 0.388221 3_2:-86062104 Msa0433610:five_prime_UTR
TTATTATCTGCAGTGATGCT+AGG 0.388780 3_2:-86057940 Msa0433610:intron
GTACTCACTAATGGATCTTC+AGG 0.389743 3_2:-86057361 Msa0433610:intron
TCATATCATTTATGGCACTT+TGG 0.401250 3_2:+86057599 None:intergenic
TGAAGTGGTTGTTGGTGATT+GGG 0.413053 3_2:+86061989 None:intergenic
TGTTTCTTTCCGTGATCATC+AGG 0.420333 3_2:-86057873 Msa0433610:intron
AGAGTGCTGGCCCTCTTGCT+GGG 0.424228 3_2:-86060240 Msa0433610:CDS
ATAGGCAAATAAGATGCAAT+TGG 0.425248 3_2:-86057447 Msa0433610:CDS
CCCGTTGGTTCGTTCCCAAA+TGG 0.428258 3_2:+86062027 None:intergenic
CACAAAACTGGTCGCTCAAA+AGG 0.430477 3_2:-86057905 Msa0433610:CDS
CCACATAATAACTTACATCA+TGG 0.442234 3_2:+86055351 None:intergenic
CCATGATGTAAGTTATTATG+TGG 0.444705 3_2:-86055351 Msa0433610:CDS
ATTGACATACATTGGAAAAT+GGG 0.455792 3_2:-86062112 Msa0433610:five_prime_UTR
CGCCGCTGCCGCCATGACTC+AGG 0.466522 3_2:-86061690 Msa0433610:intron
TCAAGCACTAAAGGTGAATT+GGG 0.467717 3_2:-86058411 Msa0433610:CDS
GCGCCGTGCAGGTAAATGGC+TGG 0.469479 3_2:-86057473 Msa0433610:intron
GTTATGTGGGATCACAAAAC+TGG 0.476499 3_2:-86057917 Msa0433610:CDS
GGCAGATTTCCACTTGGTAC+AGG 0.476764 3_2:+86060597 None:intergenic
CAGATATGGTCAAGCACTAA+AGG 0.481421 3_2:-86058420 Msa0433610:CDS
GATTAGATTGAAGTGGTTGT+TGG 0.483030 3_2:+86061981 None:intergenic
CCATTTGGGAACGAACCAAC+GGG 0.492372 3_2:-86062027 Msa0433610:five_prime_UTR
GGGCATATGCTAATAGCAGC+AGG 0.500263 3_2:-86058391 Msa0433610:CDS
CACATAATAACTTACATCAT+GGG 0.500585 3_2:+86055352 None:intergenic
ATTGAATAACCTGGATGGGA+TGG 0.501221 3_2:+86061957 None:intergenic
CAAGCTCATACGAAAAGAAA+AGG 0.505952 3_2:-86060215 Msa0433610:intron
TAGGCAAATAAGATGCAATT+GGG 0.506393 3_2:-86057446 Msa0433610:CDS
AAAGTTGCATCAGTAACCTC+TGG 0.509996 3_2:+86058204 None:intergenic
TATTATCTGCAGTGATGCTA+GGG 0.513071 3_2:-86057939 Msa0433610:intron
TGTAAGTTATTATGTGGGAT+TGG 0.513354 3_2:-86055345 Msa0433610:CDS
CGCCGTGCAGGTAAATGGCT+GGG 0.514723 3_2:-86057472 Msa0433610:intron
AGAGAGAGATTGACATACAT+TGG 0.516147 3_2:-86062120 Msa0433610:five_prime_UTR
CAGCGGCGAGCATGCCAGGA+TGG 0.517214 3_2:+86061705 None:intergenic
ACATAAACTGTGGTGTATGA+AGG 0.527956 3_2:+86055386 None:intergenic
GTAGTCCACAAAACCATAAG+AGG 0.529746 3_2:+86058789 None:intergenic
ATCTAATCTCCATCCCATCC+AGG 0.529776 3_2:-86061966 Msa0433610:intron
AGATGCAATTGGGCAACTAA+AGG 0.529820 3_2:-86057436 Msa0433610:CDS
TACCTGAGTCATGGCGGCAG+CGG 0.531709 3_2:+86061688 None:intergenic
CCAAGTGGAAATCTGCCTCC+TGG 0.532408 3_2:-86060591 Msa0433610:CDS
GCGCTGCAGATGCTCGATCA+TGG 0.535729 3_2:+86058767 None:intergenic
ACCATTTGGGAACGAACCAA+CGG 0.539831 3_2:-86062028 Msa0433610:five_prime_UTR
GCAGTGATGCTAGGGTTATG+TGG 0.542201 3_2:-86057931 Msa0433610:intron
CTTGCAATAATGACATTACA+TGG 0.546222 3_2:-86058745 Msa0433610:CDS
TCATACACCACAGTTTATGT+TGG 0.550873 3_2:-86055383 Msa0433610:CDS
TGTTGGTGATTTGAGTCCAG+AGG 0.552793 3_2:-86058220 Msa0433610:CDS
AGCAGCAGGGAGGATACCTC+AGG 0.556360 3_2:-86058377 Msa0433610:intron
ATGAGCTTGCACCCAGCAAG+AGG 0.559508 3_2:+86060229 None:intergenic
GGAAAATTGAATAACCTGGA+TGG 0.559620 3_2:+86061952 None:intergenic
CAGTGATGCTAGGGTTATGT+GGG 0.574161 3_2:-86057930 Msa0433610:CDS
GAAAATTGAATAACCTGGAT+GGG 0.576085 3_2:+86061953 None:intergenic
CATGATGTAAGTTATTATGT+GGG 0.578847 3_2:-86055350 Msa0433610:CDS
AATTGGGCAACTAAAGGAGC+TGG 0.579883 3_2:-86057430 Msa0433610:CDS
TATTGCTGCTCGACGCCCGT+TGG 0.579985 3_2:+86062012 None:intergenic
AGTGCCATAAATGATATGAC+AGG 0.580583 3_2:-86057595 Msa0433610:intron
GGATGGAGATTAGATTGAAG+TGG 0.585432 3_2:+86061974 None:intergenic
CAACAGATGTATCACCATCC+TGG 0.588864 3_2:-86061719 Msa0433610:CDS
AATCCAACACTCACACACTA+CGG 0.592155 3_2:+86060550 None:intergenic
TTGACATACATTGGAAAATG+GGG 0.593617 3_2:-86062111 Msa0433610:five_prime_UTR
CATGCAGAAGCATCAAAACC+AGG 0.594532 3_2:+86060573 None:intergenic
CAATAATGACATTACATGGA+CGG 0.597000 3_2:-86058741 Msa0433610:CDS
GTGAGACTATACGAGAAGAA+AGG 0.598318 3_2:-86062080 Msa0433610:five_prime_UTR
TTGAGTGCGTACCTGAGTCA+TGG 0.608383 3_2:+86061679 None:intergenic
CCAGGAGGCAGATTTCCACT+TGG 0.614545 3_2:+86060591 None:intergenic
ATTAAATTAATATGCAACAG+AGG 0.616865 3_2:-86061805 Msa0433610:exon
TGAGCTTGCACCCAGCAAGA+GGG 0.626119 3_2:+86060230 None:intergenic
TAAACAATACCTGATGATCA+CGG 0.630743 3_2:+86057864 None:intergenic
ACATAATAACTTACATCATG+GGG 0.631409 3_2:+86055353 None:intergenic
GTTCGTTCCCAAATGGTGTG+TGG 0.635806 3_2:+86062034 None:intergenic
TGGGCAACTAAAGGAGCTGG+TGG 0.644576 3_2:-86057427 Msa0433610:CDS
AATAACTTACATCATGGGGA+AGG 0.662148 3_2:+86055357 None:intergenic
GGCATATGCTAATAGCAGCA+GGG 0.667406 3_2:-86058390 Msa0433610:CDS
TAGATGGAGCCTGTACCAAG+TGG 0.679006 3_2:-86060606 Msa0433610:CDS
AAGGTTGCCAACATAAACTG+TGG 0.696175 3_2:+86055376 None:intergenic
AGGTCAAGATAACAGCAATG+AGG 0.720049 3_2:-86055426 Msa0433610:CDS
AGTGCGTACCTGAGTCATGG+CGG 0.723312 3_2:+86061682 None:intergenic
GCAGAAGCATCAAAACCAGG+AGG 0.745439 3_2:+86060576 None:intergenic
ATATGCTAATAGCAGCAGGG+AGG 0.768819 3_2:-86058387 Msa0433610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTACAGTTAATTTTTT+AGG - chr3_2:86056005-86056024 Msa0433610:intron 10.0%
!! AAAAAAAAAAAAAAACTAGA+TGG + chr3_2:86056115-86056134 None:intergenic 10.0%
!! AAACAAAAATAATATGAAAT+TGG + chr3_2:86056192-86056211 None:intergenic 10.0%
!! ATAACAAATATTAAAAATTG+GGG + chr3_2:86056809-86056828 None:intergenic 10.0%
!! ATACTAATTAAAATATATGA+AGG - chr3_2:86060333-86060352 Msa0433610:intron 10.0%
!! AAATAGAAAAGTTAAATTAA+GGG - chr3_2:86061495-86061514 Msa0433610:intron 10.0%
!!! TAAACTTCTAATATTATTTT+TGG - chr3_2:86061794-86061813 Msa0433610:CDS 10.0%
!!! AACAATGATTTTTCAATAAA+AGG + chr3_2:86056320-86056339 None:intergenic 15.0%
!! TTACAATTTGTATTATTAGT+CGG - chr3_2:86056650-86056669 Msa0433610:intron 15.0%
!!! TAAATAATGATGCTTTTAAT+TGG - chr3_2:86057031-86057050 Msa0433610:intron 15.0%
!!! TCTTTTTAAAATGTTTGTTT+TGG - chr3_2:86057430-86057449 Msa0433610:CDS 15.0%
!!! AATATAATTCCATTTTTAGT+TGG + chr3_2:86057557-86057576 None:intergenic 15.0%
!! GAAAATAGTTTATAAAGATT+AGG + chr3_2:86057817-86057836 None:intergenic 15.0%
!! AAGGATTAATAAATAGATTT+GGG + chr3_2:86060142-86060161 None:intergenic 15.0%
!! AGAATATGTATTATAGATAA+AGG - chr3_2:86060224-86060243 Msa0433610:CDS 15.0%
!!! TAGACTAGTTTTTTTTAATT+GGG + chr3_2:86061433-86061452 None:intergenic 15.0%
!!! ATAGACTAGTTTTTTTTAAT+TGG + chr3_2:86061434-86061453 None:intergenic 15.0%
!! GAAATAGAAAAGTTAAATTA+AGG - chr3_2:86061494-86061513 Msa0433610:intron 15.0%
!! AAAGATACTTTCATTAAATA+TGG - chr3_2:86061524-86061543 Msa0433610:intron 15.0%
!! AAGATACTTTCATTAAATAT+GGG - chr3_2:86061525-86061544 Msa0433610:intron 15.0%
!! ATTAAATTAATATGCAACAG+AGG - chr3_2:86055643-86055662 Msa0433610:intron 20.0%
!! CAAACATTGAGTATATATTA+TGG + chr3_2:86055813-86055832 None:intergenic 20.0%
!! TGAATACAAAATAAAAAGCA+TGG + chr3_2:86055986-86056005 None:intergenic 20.0%
!! CTATTGTTATAGTAATTTGA+TGG - chr3_2:86056146-86056165 Msa0433610:intron 20.0%
!!! GAAAAATCATTGTTAGTTTT+TGG - chr3_2:86056326-86056345 Msa0433610:intron 20.0%
!!! TTCTTGATTAAAGAAACTTT+TGG + chr3_2:86056510-86056529 None:intergenic 20.0%
!!! TATTTTGGAAATTTTGTAGA+TGG - chr3_2:86056826-86056845 Msa0433610:intron 20.0%
!!! CCATATTTTGTGAAAAATTT+AGG + chr3_2:86057381-86057400 None:intergenic 20.0%
!!! CCTAAATTTTTCACAAAATA+TGG - chr3_2:86057378-86057397 Msa0433610:CDS 20.0%
!! AAAAATTCATTACAGTGAAA+AGG + chr3_2:86057684-86057703 None:intergenic 20.0%
!! AATAGTTTATAAAGATTAGG+TGG + chr3_2:86057814-86057833 None:intergenic 20.0%
!!! CTAATATCATGTTAGATTTT+TGG - chr3_2:86057933-86057952 Msa0433610:intron 20.0%
!!! ACTGACATATTTTTCTTTAT+TGG + chr3_2:86058147-86058166 None:intergenic 20.0%
!!! TGTTCAATTTGTGTTTATTT+TGG - chr3_2:86058745-86058764 Msa0433610:CDS 20.0%
!! CTGCATAATTAAAACAATAT+CGG + chr3_2:86058932-86058951 None:intergenic 20.0%
!!! GATTTTGAACTAGAAATTAA+AGG + chr3_2:86059187-86059206 None:intergenic 20.0%
!!! AATAGGTATATTCTTTTTGA+TGG - chr3_2:86059354-86059373 Msa0433610:intron 20.0%
!!! GTTTCAATGATTTTTTTGTA+AGG + chr3_2:86059750-86059769 None:intergenic 20.0%
!! AGTATGAGTAAACAATAAAA+TGG + chr3_2:86059883-86059902 None:intergenic 20.0%
!! CAAGGATTAATAAATAGATT+TGG + chr3_2:86060143-86060162 None:intergenic 20.0%
!! CCAACATAATAGTTTAAATA+TGG + chr3_2:86060275-86060294 None:intergenic 20.0%
!! CCATATTTAAACTATTATGT+TGG - chr3_2:86060272-86060291 Msa0433610:CDS 20.0%
!! CATTACCTTTATATAGTAAA+TGG - chr3_2:86060398-86060417 Msa0433610:intron 20.0%
!! TTTATAGAGTTATTGAATGA+TGG - chr3_2:86061865-86061884 Msa0433610:intron 20.0%
! ATTGACATACATTGGAAAAT+GGG - chr3_2:86055336-86055355 Msa0433610:CDS 25.0%
!! AGTATATATTATGGTGGAAA+TGG + chr3_2:86055804-86055823 None:intergenic 25.0%
! ACATTGAGTATATATTATGG+TGG + chr3_2:86055810-86055829 None:intergenic 25.0%
! ATATATCAATGGTTAAGACT+GGG + chr3_2:86056037-86056056 None:intergenic 25.0%
! TAACCATTGATATATCAGTA+AGG - chr3_2:86056042-86056061 Msa0433610:intron 25.0%
! ATTCCTTACTGATATATCAA+TGG + chr3_2:86056048-86056067 None:intergenic 25.0%
! AATAATATGAAATTGGACAG+CGG + chr3_2:86056185-86056204 None:intergenic 25.0%
!! TGTTACAGAATTATTTTCGT+TGG - chr3_2:86056585-86056604 Msa0433610:intron 25.0%
!! TATTTTCGTTGGTCATTATA+TGG - chr3_2:86056596-86056615 Msa0433610:intron 25.0%
! AAACTGTTTACACAATTGAT+TGG - chr3_2:86056626-86056645 Msa0433610:intron 25.0%
!!! TCGGATAATTTGTTTTTTAG+AGG - chr3_2:86056669-86056688 Msa0433610:intron 25.0%
!! TTTTACTATCAACGAAAGAT+TGG - chr3_2:86056713-86056732 Msa0433610:intron 25.0%
!! AAAAAGAAATTTGCTTCTAC+AGG + chr3_2:86057012-86057031 None:intergenic 25.0%
! AGATTAATTAGGTATCAAAG+TGG + chr3_2:86057114-86057133 None:intergenic 25.0%
! CACAAAACTTCAGATTAATT+AGG + chr3_2:86057125-86057144 None:intergenic 25.0%
!!! AGACAAGGGTATTTAAAAAT+AGG + chr3_2:86057340-86057359 None:intergenic 25.0%
!! CTTATAGTTGTTTAAGACAA+GGG + chr3_2:86057354-86057373 None:intergenic 25.0%
!! TTTCACTCAAATTTTCTTTC+TGG - chr3_2:86057456-86057475 Msa0433610:CDS 25.0%
!! TTCACTCAAATTTTCTTTCT+GGG - chr3_2:86057457-86057476 Msa0433610:CDS 25.0%
! TGAATTAGATTAATAGGGAT+AGG + chr3_2:86057590-86057609 None:intergenic 25.0%
! GGTCTTGAATTAGATTAATA+GGG + chr3_2:86057595-86057614 None:intergenic 25.0%
! AGGTCTTGAATTAGATTAAT+AGG + chr3_2:86057596-86057615 None:intergenic 25.0%
!! ATTTTTCATTGAATCCAAGA+CGG - chr3_2:86057698-86057717 Msa0433610:intron 25.0%
! GATTCAAAATTCTAAGCATT+GGG + chr3_2:86057755-86057774 None:intergenic 25.0%
! TGATTCAAAATTCTAAGCAT+TGG + chr3_2:86057756-86057775 None:intergenic 25.0%
! TGATATTAGAGTATGTTGAT+AGG + chr3_2:86057922-86057941 None:intergenic 25.0%
!! TCTAGCATTGAAAAGAAATA+AGG + chr3_2:86058039-86058058 None:intergenic 25.0%
! AAGAAAAATATGTCAGTACT+TGG - chr3_2:86058150-86058169 Msa0433610:intron 25.0%
!! GTTATAACTTGTAAGTCAAT+TGG - chr3_2:86058464-86058483 Msa0433610:intron 25.0%
! AGAAACCAAAAAGTAAAGAA+CGG + chr3_2:86058592-86058611 None:intergenic 25.0%
!!! ATTTCTAGTTCAAAATCATC+AGG - chr3_2:86059190-86059209 Msa0433610:intron 25.0%
!!! TTTCTAGTTCAAAATCATCA+GGG - chr3_2:86059191-86059210 Msa0433610:intron 25.0%
! TTGAAGAAAGATAGATGATA+TGG - chr3_2:86059409-86059428 Msa0433610:intron 25.0%
! TGAAGAAAGATAGATGATAT+GGG - chr3_2:86059410-86059429 Msa0433610:intron 25.0%
!!! AATTTTGAGAGCAAAGATAA+TGG + chr3_2:86059681-86059700 None:intergenic 25.0%
! TGTCTTTATGCAATTAATAC+AGG - chr3_2:86059822-86059841 Msa0433610:intron 25.0%
! ATCCTTGAAAATATAGATGA+AGG - chr3_2:86060156-86060175 Msa0433610:intron 25.0%
! ATTTAAACTATTATGTTGGC+TGG - chr3_2:86060276-86060295 Msa0433610:CDS 25.0%
! TGGAAATTGCTATAAATTCA+TGG - chr3_2:86060296-86060315 Msa0433610:CDS 25.0%
! TTGCTTGTAATAATTCATTC+CGG + chr3_2:86060478-86060497 None:intergenic 25.0%
! AGATATAGTTGTTGTGAATT+CGG - chr3_2:86060523-86060542 Msa0433610:intron 25.0%
! ACTTTCTTTATCTTGTTCTT+TGG + chr3_2:86060686-86060705 None:intergenic 25.0%
!!! AAACAATTTGTTAACACCTT+GGG + chr3_2:86060931-86060950 None:intergenic 25.0%
!! TCTAGAATATAACCCTAAAT+GGG - chr3_2:86060957-86060976 Msa0433610:intron 25.0%
! CATTTATACATGTTTAATCC+TGG + chr3_2:86061292-86061311 None:intergenic 25.0%
!!! TTTGTTATGTGTTTTACAGA+TGG - chr3_2:86061999-86062018 Msa0433610:five_prime_UTR 25.0%
! ACATAATAACTTACATCATG+GGG + chr3_2:86062098-86062117 None:intergenic 25.0%
! CACATAATAACTTACATCAT+GGG + chr3_2:86062099-86062118 None:intergenic 25.0%
! CATGATGTAAGTTATTATGT+GGG - chr3_2:86062098-86062117 Msa0433610:five_prime_UTR 25.0%
GATTGACATACATTGGAAAA+TGG - chr3_2:86055335-86055354 Msa0433610:CDS 30.0%
TTGACATACATTGGAAAATG+GGG - chr3_2:86055337-86055356 Msa0433610:CDS 30.0%
GAAAATTGAATAACCTGGAT+GGG + chr3_2:86055498-86055517 None:intergenic 30.0%
TGAAAATGAAAATCGCGAAT+CGG + chr3_2:86055537-86055556 None:intergenic 30.0%
! TTGATTTCTGAAGAAGAAAG+AGG + chr3_2:86055608-86055627 None:intergenic 30.0%
!!! AGCTCAAATTGATTTTTAGC+TGG - chr3_2:86055852-86055871 Msa0433610:intron 30.0%
GATATATCAATGGTTAAGAC+TGG + chr3_2:86056038-86056057 None:intergenic 30.0%
!! ATGGATTTTAGAGGAAGAAA+TGG - chr3_2:86056286-86056305 Msa0433610:intron 30.0%
!! AAATGTTGAGTTGTTTCTGT+TGG + chr3_2:86056486-86056505 None:intergenic 30.0%
! CACAAATGGTTATTTCACAA+TGG - chr3_2:86056556-86056575 Msa0433610:intron 30.0%
TTCCTTCTACGATTCTATTT+AGG - chr3_2:86056749-86056768 Msa0433610:intron 30.0%
TCCTTCTACGATTCTATTTA+GGG - chr3_2:86056750-86056769 Msa0433610:intron 30.0%
GGTAGAAATTATGTACCAAA+AGG + chr3_2:86056991-86057010 None:intergenic 30.0%
ATTGTGAGAGATAAGTTTGA+TGG - chr3_2:86057060-86057079 Msa0433610:intron 30.0%
! TTTTGTGCTTTCAGTTATGT+AGG - chr3_2:86057138-86057157 Msa0433610:intron 30.0%
! CCTTATAGTTGTTTAAGACA+AGG + chr3_2:86057355-86057374 None:intergenic 30.0%
CCTTGTCTTAAACAACTATA+AGG - chr3_2:86057352-86057371 Msa0433610:intron 30.0%
! TCACTCAAATTTTCTTTCTG+GGG - chr3_2:86057458-86057477 Msa0433610:CDS 30.0%
!!! TTCCATTTTTAGTTGGAGAA+GGG + chr3_2:86057550-86057569 None:intergenic 30.0%
!!! ATTCCATTTTTAGTTGGAGA+AGG + chr3_2:86057551-86057570 None:intergenic 30.0%
TTAGATTAATAGGGATAGGT+TGG + chr3_2:86057586-86057605 None:intergenic 30.0%
GGAATACATCATTCTTGAAA+TGG + chr3_2:86057663-86057682 None:intergenic 30.0%
! TGCTATAAATTTTTCCGTCT+TGG + chr3_2:86057715-86057734 None:intergenic 30.0%
! ACCTAATCTGTTTTCAATGA+GGG - chr3_2:86057839-86057858 Msa0433610:intron 30.0%
ATAGTATACTAGGCATAAGA+GGG + chr3_2:86057886-86057905 None:intergenic 30.0%
AATAGTATACTAGGCATAAG+AGG + chr3_2:86057887-86057906 None:intergenic 30.0%
CTTATGCCTAGTATACTATT+TGG - chr3_2:86057887-86057906 Msa0433610:CDS 30.0%
! TTCTTTTCAATGCTAGACTT+TGG - chr3_2:86058042-86058061 Msa0433610:intron 30.0%
TCTACAAGATAAAGATCTCA+AGG + chr3_2:86058080-86058099 None:intergenic 30.0%
TTGAGATCTTTATCTTGTAG+AGG - chr3_2:86058079-86058098 Msa0433610:intron 30.0%
! TACTTGGCACAAAATTTGTT+TGG - chr3_2:86058166-86058185 Msa0433610:intron 30.0%
ATAGTGTAAATCCGTAAGAT+AGG - chr3_2:86058337-86058356 Msa0433610:intron 30.0%
GAAACCAAAAAGTAAAGAAC+GGG + chr3_2:86058591-86058610 None:intergenic 30.0%
!!! GTGTTTTTTTTTTCCGTTGT+TGG - chr3_2:86058618-86058637 Msa0433610:intron 30.0%
AACAGTAATTTCACCAACAA+CGG + chr3_2:86058634-86058653 None:intergenic 30.0%
CTTGCAATAATGACATTACA+TGG - chr3_2:86058703-86058722 Msa0433610:intron 30.0%
CAATAATGACATTACATGGA+CGG - chr3_2:86058707-86058726 Msa0433610:intron 30.0%
GAATGCAAATATCATCCTAA+TGG - chr3_2:86058862-86058881 Msa0433610:intron 30.0%
TTAATTATGCAGTCTTGACA+AGG - chr3_2:86058940-86058959 Msa0433610:intron 30.0%
TAATTATGCAGTCTTGACAA+GGG - chr3_2:86058941-86058960 Msa0433610:intron 30.0%
TGTGATGTTGCTATGTATAA+AGG + chr3_2:86058979-86058998 None:intergenic 30.0%
! GTTATTTCCATTTGCAGATA+TGG - chr3_2:86059014-86059033 Msa0433610:intron 30.0%
!! AATAGATGGGTTGCATTTAA+AGG + chr3_2:86059100-86059119 None:intergenic 30.0%
CATCAAAACCAACAATAGAT+GGG + chr3_2:86059113-86059132 None:intergenic 30.0%
TCATCAAAACCAACAATAGA+TGG + chr3_2:86059114-86059133 None:intergenic 30.0%
!! GTTTTGATGATTTTGCTTCT+CGG - chr3_2:86059124-86059143 Msa0433610:intron 30.0%
!! TTTTGATGATTTTGCTTCTC+GGG - chr3_2:86059125-86059144 Msa0433610:intron 30.0%
!!! ATTACATTTTTTTGGGTCAC+TGG - chr3_2:86059331-86059350 Msa0433610:intron 30.0%
AATATTGTAGTCCTTGTTAG+TGG - chr3_2:86059379-86059398 Msa0433610:intron 30.0%
GAAGAAAGATAGATGATATG+GGG - chr3_2:86059411-86059430 Msa0433610:intron 30.0%
AAGAAAGATAGATGATATGG+GGG - chr3_2:86059412-86059431 Msa0433610:intron 30.0%
!!! TTGCAAGACATTTTGGTTTT+TGG - chr3_2:86059462-86059481 Msa0433610:intron 30.0%
TAAACAATACCTGATGATCA+CGG + chr3_2:86059587-86059606 None:intergenic 30.0%
! AGCAAAGATAATGGTCTTTA+AGG + chr3_2:86059672-86059691 None:intergenic 30.0%
CTAATTCATGTAGCTAAACA+TGG + chr3_2:86059710-86059729 None:intergenic 30.0%
ATTATTAGTACAGTTCGTAC+TGG + chr3_2:86059782-86059801 None:intergenic 30.0%
!! GTACTAATAATTTGCTGAAC+TGG - chr3_2:86059791-86059810 Msa0433610:intron 30.0%
CATATCATTTATGGCACTTT+GGG + chr3_2:86059851-86059870 None:intergenic 30.0%
TCATATCATTTATGGCACTT+TGG + chr3_2:86059852-86059871 None:intergenic 30.0%
CTAACCTGTCATATCATTTA+TGG + chr3_2:86059860-86059879 None:intergenic 30.0%
ATAGGCAAATAAGATGCAAT+TGG - chr3_2:86060001-86060020 Msa0433610:intron 30.0%
TAGGCAAATAAGATGCAATT+GGG - chr3_2:86060002-86060021 Msa0433610:intron 30.0%
! TGCCTTCATCTATATTTTCA+AGG + chr3_2:86060161-86060180 None:intergenic 30.0%
CCACTCCATTTACTATATAA+AGG + chr3_2:86060406-86060425 None:intergenic 30.0%
CCTTTATATAGTAAATGGAG+TGG - chr3_2:86060403-86060422 Msa0433610:intron 30.0%
GATATAGTTGTTGTGAATTC+GGG - chr3_2:86060524-86060543 Msa0433610:intron 30.0%
!! GAAACAATTTGTTAACACCT+TGG + chr3_2:86060932-86060951 None:intergenic 30.0%
!! TAGGGTTATATTCTAGAGTT+AGG + chr3_2:86060954-86060973 None:intergenic 30.0%
!! CTCTAGAATATAACCCTAAA+TGG - chr3_2:86060956-86060975 Msa0433610:intron 30.0%
!! AATTTTTGACCCATTTGTTG+GGG + chr3_2:86061235-86061254 None:intergenic 30.0%
! CAATTTTTGACCCATTTGTT+GGG + chr3_2:86061236-86061255 None:intergenic 30.0%
TTAGTCATGGAGGATAATTT+AGG + chr3_2:86061459-86061478 None:intergenic 30.0%
TATCCTCCATGACTAAAAAA+TGG - chr3_2:86061463-86061482 Msa0433610:intron 30.0%
!!! ATGACTCCATTTTTTAGTCA+TGG + chr3_2:86061472-86061491 None:intergenic 30.0%
ACCTTTATTAGTGTGTTTGA+AGG - chr3_2:86061670-86061689 Msa0433610:intron 30.0%
CCTTTATTAGTGTGTTTGAA+GGG - chr3_2:86061671-86061690 Msa0433610:intron 30.0%
TGTTGTCTATATTAACTGAC+TGG + chr3_2:86061714-86061733 None:intergenic 30.0%
TAGAGTTATTGAATGATGGT+TGG - chr3_2:86061869-86061888 Msa0433610:intron 30.0%
TGAAGTCATAGAGCTTAATA+GGG + chr3_2:86061903-86061922 None:intergenic 30.0%
ATGAAGTCATAGAGCTTAAT+AGG + chr3_2:86061904-86061923 None:intergenic 30.0%
CCACATAATAACTTACATCA+TGG + chr3_2:86062100-86062119 None:intergenic 30.0%
CCATGATGTAAGTTATTATG+TGG - chr3_2:86062097-86062116 Msa0433610:five_prime_UTR 30.0%
TGTAAGTTATTATGTGGGAT+TGG - chr3_2:86062103-86062122 Msa0433610:five_prime_UTR 30.0%
TACATTGGAAAATGGGGATT+TGG - chr3_2:86055343-86055362 Msa0433610:CDS 35.0%
ACATTGGAAAATGGGGATTT+GGG - chr3_2:86055344-86055363 Msa0433610:CDS 35.0%
CAAATTTCCACACACCATTT+GGG - chr3_2:86055407-86055426 Msa0433610:CDS 35.0%
GATTAGATTGAAGTGGTTGT+TGG + chr3_2:86055470-86055489 None:intergenic 35.0%
GGAAAATTGAATAACCTGGA+TGG + chr3_2:86055499-86055518 None:intergenic 35.0%
CATCATTCTATGTGTGTGTT+TGG + chr3_2:86055931-86055950 None:intergenic 35.0%
CAAACACACACATAGAATGA+TGG - chr3_2:86055929-86055948 Msa0433610:intron 35.0%
TTATATTACCAACAGCTGTG+TGG - chr3_2:86056210-86056229 Msa0433610:intron 35.0%
GCATAGAATATGCTAGTAAC+TGG + chr3_2:86056246-86056265 None:intergenic 35.0%
ATGCATCACCTATAAAACTG+AGG - chr3_2:86056262-86056281 Msa0433610:intron 35.0%
TGCATCACCTATAAAACTGA+GGG - chr3_2:86056263-86056282 Msa0433610:intron 35.0%
!! AATCCATCCCTCAGTTTTAT+AGG + chr3_2:86056273-86056292 None:intergenic 35.0%
GTACACACAAAACACACAAA+TGG - chr3_2:86056542-86056561 Msa0433610:intron 35.0%
ACCCTAAATAGAATCGTAGA+AGG + chr3_2:86056754-86056773 None:intergenic 35.0%
GATAAAATCCTGGCAACAAT+AGG + chr3_2:86056782-86056801 None:intergenic 35.0%
TTGGGGAAAAGATAAAATCC+TGG + chr3_2:86056792-86056811 None:intergenic 35.0%
GAACAAACACAACAAAACTG+AGG + chr3_2:86056950-86056969 None:intergenic 35.0%
AAGGAAAATTCGACATGCTT+GGG + chr3_2:86056972-86056991 None:intergenic 35.0%
AAAGGAAAATTCGACATGCT+TGG + chr3_2:86056973-86056992 None:intergenic 35.0%
! AGCATGTCGAATTTTCCTTT+TGG - chr3_2:86056973-86056992 Msa0433610:intron 35.0%
CAAGCTCATACGAAAAGAAA+AGG - chr3_2:86057233-86057252 Msa0433610:intron 35.0%
CATTCATCAGCAAAGAACAT+TGG + chr3_2:86057277-86057296 None:intergenic 35.0%
TTGTAAGGACGAGTTATACA+AGG + chr3_2:86057487-86057506 None:intergenic 35.0%
!!! TCCATTTTTAGTTGGAGAAG+GGG + chr3_2:86057549-86057568 None:intergenic 35.0%
! ATTAATAGGGATAGGTTGGA+GGG + chr3_2:86057582-86057601 None:intergenic 35.0%
TTCAAGACCTAATCAGTAGA+TGG - chr3_2:86057606-86057625 Msa0433610:CDS 35.0%
!! TCAAAATTCTAAGCATTGGG+AGG + chr3_2:86057752-86057771 None:intergenic 35.0%
ATTAGGTGGAAGCAAATGTA+GGG + chr3_2:86057800-86057819 None:intergenic 35.0%
! GACCTAATCTGTTTTCAATG+AGG - chr3_2:86057838-86057857 Msa0433610:intron 35.0%
TCCCTCATTGAAAACAGATT+AGG + chr3_2:86057843-86057862 None:intergenic 35.0%
ATTGGGCCAAATAGTATACT+AGG + chr3_2:86057896-86057915 None:intergenic 35.0%
! AGTATGTTGATAGGCAGATT+GGG + chr3_2:86057913-86057932 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr3_2:86057963-86057982 Msa0433610:intron 35.0%
CTTTATCTTGTAGAGGTGAT+AGG - chr3_2:86058086-86058105 Msa0433610:intron 35.0%
! GCACAAAATTTGTTTGGTGA+AGG - chr3_2:86058172-86058191 Msa0433610:CDS 35.0%
! CAAAATTTGTTTGGTGAAGG+TGG - chr3_2:86058175-86058194 Msa0433610:CDS 35.0%
GGTCAGTAATTTAGACAACA+AGG + chr3_2:86058291-86058310 None:intergenic 35.0%
CTGATATCATGACAGATAAG+TGG + chr3_2:86058312-86058331 None:intergenic 35.0%
CTTACGGATTTACACTATCA+AGG + chr3_2:86058335-86058354 None:intergenic 35.0%
AGTTAGAGAAGCCTATCTTA+CGG + chr3_2:86058351-86058370 None:intergenic 35.0%
TAAGATAGGCTTCTCTAACT+TGG - chr3_2:86058351-86058370 Msa0433610:intron 35.0%
AGAAAATTCAGCTGCTAAGA+AGG - chr3_2:86058413-86058432 Msa0433610:CDS 35.0%
ACAAGTTATAACACACAAGC+AGG + chr3_2:86058456-86058475 None:intergenic 35.0%
!! TACTCCCGTTCTTTACTTTT+TGG - chr3_2:86058584-86058603 Msa0433610:intron 35.0%
TTACTGTTACAGTCCTCTTA+TGG - chr3_2:86058646-86058665 Msa0433610:intron 35.0%
! TCATCTATCTCTAGAAAAGC+TGG + chr3_2:86058819-86058838 None:intergenic 35.0%
TCAAGCACTAAAGGTGAATT+GGG - chr3_2:86059037-86059056 Msa0433610:intron 35.0%
TTGCATTTAAAGGTAACCTG+AGG + chr3_2:86059090-86059109 None:intergenic 35.0%
AAATGCAACCCATCTATTGT+TGG - chr3_2:86059102-86059121 Msa0433610:intron 35.0%
!! TTTGATGATTTTGCTTCTCG+GGG - chr3_2:86059126-86059145 Msa0433610:intron 35.0%
!!! TTTTTTTGGGTCACTGGAAT+AGG - chr3_2:86059337-86059356 Msa0433610:intron 35.0%
GCAGATAATAAGAGAGAAGA+TGG + chr3_2:86059499-86059518 None:intergenic 35.0%
TTATTATCTGCAGTGATGCT+AGG - chr3_2:86059508-86059527 Msa0433610:intron 35.0%
TATTATCTGCAGTGATGCTA+GGG - chr3_2:86059509-86059528 Msa0433610:intron 35.0%
TTCTGTACGCTAGAATTTAC+AGG - chr3_2:86059607-86059626 Msa0433610:intron 35.0%
AGTGCCATAAATGATATGAC+AGG - chr3_2:86059853-86059872 Msa0433610:intron 35.0%
! GAATAGAAGCATAACAACAG+AGG + chr3_2:86059917-86059936 None:intergenic 35.0%
ACGTCACAAGTTAGAAGAAA+TGG + chr3_2:86059950-86059969 None:intergenic 35.0%
! TAGTGAGTACAACAGCATTT+TGG + chr3_2:86060077-86060096 None:intergenic 35.0%
AATGCTGTTGTACTCACTAA+TGG - chr3_2:86060078-86060097 Msa0433610:intron 35.0%
GGGATCACAGATATTTAGAA+AGG + chr3_2:86060122-86060141 None:intergenic 35.0%
GAAGGATATCATGCGAAATT+TGG - chr3_2:86060351-86060370 Msa0433610:intron 35.0%
ACCAGTAAAACTTAGATGTG+TGG - chr3_2:86060560-86060579 Msa0433610:intron 35.0%
! TCCACACATCTAAGTTTTAC+TGG + chr3_2:86060564-86060583 None:intergenic 35.0%
ATGTGTGGAGCAAATATCAA+TGG - chr3_2:86060575-86060594 Msa0433610:CDS 35.0%
TATTGTTGCTAGTGACTGTT+TGG + chr3_2:86060611-86060630 None:intergenic 35.0%
AAACTGGGTGAACAAATTCT+TGG + chr3_2:86060729-86060748 None:intergenic 35.0%
! AAGAATTTGTTCACCCAGTT+TGG - chr3_2:86060728-86060747 Msa0433610:intron 35.0%
GCAAAAAAAAAACTGTGACG+TGG + chr3_2:86060791-86060810 None:intergenic 35.0%
AGTGAAATCATTGAGTCTCT+TGG + chr3_2:86060907-86060926 None:intergenic 35.0%
AGAAATTCAAGGCTAAGGTT+TGG + chr3_2:86060984-86061003 None:intergenic 35.0%
CCTTAAGAAATTCAAGGCTA+AGG + chr3_2:86060989-86061008 None:intergenic 35.0%
!! CCTTAGCCTTGAATTTCTTA+AGG - chr3_2:86060986-86061005 Msa0433610:intron 35.0%
GGAGATCCTTAAGAAATTCA+AGG + chr3_2:86060995-86061014 None:intergenic 35.0%
! TTCTTAAGGATCTCCTCTTT+TGG - chr3_2:86061000-86061019 Msa0433610:intron 35.0%
TGAATCTTGGAACCAAAAGA+GGG + chr3_2:86061126-86061145 None:intergenic 35.0%
GTCTTTGAGTGAGATTCAAA+GGG + chr3_2:86061157-86061176 None:intergenic 35.0%
! GCAATTTTTGACCCATTTGT+TGG + chr3_2:86061237-86061256 None:intergenic 35.0%
CTCTAATCATGGCATGATTT+GGG + chr3_2:86061322-86061341 None:intergenic 35.0%
TGAACTCACATCCAAAATTG+TGG + chr3_2:86061354-86061373 None:intergenic 35.0%
!!! ACTCCATTTTTTAGTCATGG+AGG + chr3_2:86061469-86061488 None:intergenic 35.0%
CCCTTCAAACACACTAATAA+AGG + chr3_2:86061674-86061693 None:intergenic 35.0%
! TATCCAAAAGAAGTGATGGA+CGG + chr3_2:86061829-86061848 None:intergenic 35.0%
ACAGTATCCAAAAGAAGTGA+TGG + chr3_2:86061833-86061852 None:intergenic 35.0%
! TCTTTTGCACTTCTGTAAAC+AGG - chr3_2:86061937-86061956 Msa0433610:intron 35.0%
! TGTAAACAGGCTGAGAATTT+TGG - chr3_2:86061950-86061969 Msa0433610:intron 35.0%
! GTAAACAGGCTGAGAATTTT+GGG - chr3_2:86061951-86061970 Msa0433610:intron 35.0%
! GTTATGTGTTTTACAGATGG+AGG - chr3_2:86062002-86062021 Msa0433610:five_prime_UTR 35.0%
! GTGTATGAAGGATTGTTTTC+AGG + chr3_2:86062053-86062072 None:intergenic 35.0%
ACATAAACTGTGGTGTATGA+AGG + chr3_2:86062065-86062084 None:intergenic 35.0%
TCATACACCACAGTTTATGT+TGG - chr3_2:86062065-86062084 Msa0433610:five_prime_UTR 35.0%
AATAACTTACATCATGGGGA+AGG + chr3_2:86062094-86062113 None:intergenic 35.0%
!! GTTATTATGTGGGATTGGTT+TGG - chr3_2:86062108-86062127 Msa0433610:five_prime_UTR 35.0%
GTGAGACTATACGAGAAGAA+AGG - chr3_2:86055368-86055387 Msa0433610:CDS 40.0%
GCAAATTTCCACACACCATT+TGG - chr3_2:86055406-86055425 Msa0433610:CDS 40.0%
!! TGAAGTGGTTGTTGGTGATT+GGG + chr3_2:86055462-86055481 None:intergenic 40.0%
!! TTGAAGTGGTTGTTGGTGAT+TGG + chr3_2:86055463-86055482 None:intergenic 40.0%
GGATGGAGATTAGATTGAAG+TGG + chr3_2:86055477-86055496 None:intergenic 40.0%
ATTGAATAACCTGGATGGGA+TGG + chr3_2:86055494-86055513 None:intergenic 40.0%
TGGGGGAAAATTGAATAACC+TGG + chr3_2:86055503-86055522 None:intergenic 40.0%
AATCGGTGAATGAAATCTGG+GGG + chr3_2:86055520-86055539 None:intergenic 40.0%
GAATCGGTGAATGAAATCTG+GGG + chr3_2:86055521-86055540 None:intergenic 40.0%
CGAATCGGTGAATGAAATCT+GGG + chr3_2:86055522-86055541 None:intergenic 40.0%
TTGAGCTCTTCTTCTCAAAG+AGG + chr3_2:86055839-86055858 None:intergenic 40.0%
TGAAATTACCACACAGCTGT+TGG + chr3_2:86056221-86056240 None:intergenic 40.0%
TCACCTATAAAACTGAGGGA+TGG - chr3_2:86056267-86056286 Msa0433610:intron 40.0%
!! AACTGAGGGATGGATTTTAG+AGG - chr3_2:86056277-86056296 Msa0433610:intron 40.0%
!! CATAACTTGCCAGCACTTTT+AGG - chr3_2:86056442-86056461 Msa0433610:intron 40.0%
! ATGTGAAGACCTAAAAGTGC+TGG + chr3_2:86056454-86056473 None:intergenic 40.0%
AATCCAACACTCACACACTA+CGG + chr3_2:86056901-86056920 None:intergenic 40.0%
GTGGAAAACTACACTACTTC+TGG + chr3_2:86057095-86057114 None:intergenic 40.0%
!!! CCTTTCAAGCTGGTTTTGTA+AGG + chr3_2:86057502-86057521 None:intergenic 40.0%
CCTTACAAAACCAGCTTGAA+AGG - chr3_2:86057499-86057518 Msa0433610:intron 40.0%
TGTACACAAACCTTTCAAGC+TGG + chr3_2:86057512-86057531 None:intergenic 40.0%
GCTTGAAAGGTTTGTGTACA+AGG - chr3_2:86057512-86057531 Msa0433610:intron 40.0%
ACCCCTTCTCCAACTAAAAA+TGG - chr3_2:86057545-86057564 Msa0433610:intron 40.0%
! GATTAATAGGGATAGGTTGG+AGG + chr3_2:86057583-86057602 None:intergenic 40.0%
TGGAAGCAAATGTAGGGAAA+GGG + chr3_2:86057794-86057813 None:intergenic 40.0%
GATTAGGTGGAAGCAAATGT+AGG + chr3_2:86057801-86057820 None:intergenic 40.0%
! TCTGTTTTCAATGAGGGACA+TGG - chr3_2:86057845-86057864 Msa0433610:intron 40.0%
! CTGTTTTCAATGAGGGACAT+GGG - chr3_2:86057846-86057865 Msa0433610:intron 40.0%
! GAGTATGTTGATAGGCAGAT+TGG + chr3_2:86057914-86057933 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + chr3_2:86057965-86057984 None:intergenic 40.0%
AAACAGCGAAAACTCTTCGT+TGG + chr3_2:86058219-86058238 None:intergenic 40.0%
! AGCAGTAGAGTTCTCTAGAA+GGG + chr3_2:86058242-86058261 None:intergenic 40.0%
TATAGTTATCTGCCTTGCTG+TGG - chr3_2:86058487-86058506 Msa0433610:intron 40.0%
! ATAGTTATCTGCCTTGCTGT+GGG - chr3_2:86058488-86058507 Msa0433610:intron 40.0%
ACTAGACTAAGCAACTGTCA+GGG + chr3_2:86058530-86058549 None:intergenic 40.0%
TACTAGACTAAGCAACTGTC+AGG + chr3_2:86058531-86058550 None:intergenic 40.0%
AAGTAAAGAACGGGAGTAGA+AGG + chr3_2:86058582-86058601 None:intergenic 40.0%
!! ACAGTCCTCTTATGGTTTTG+TGG - chr3_2:86058654-86058673 Msa0433610:intron 40.0%
GTAGTCCACAAAACCATAAG+AGG + chr3_2:86058662-86058681 None:intergenic 40.0%
! CTATCTCTAGAAAAGCTGGA+TGG + chr3_2:86058815-86058834 None:intergenic 40.0%
TGCTTGACCATATCTGCAAA+TGG + chr3_2:86059024-86059043 None:intergenic 40.0%
CAGATATGGTCAAGCACTAA+AGG - chr3_2:86059028-86059047 Msa0433610:intron 40.0%
GTCAAGCACTAAAGGTGAAT+TGG - chr3_2:86059036-86059055 Msa0433610:intron 40.0%
!! GGGCACTTCAATGTTTTTGT+TGG - chr3_2:86059211-86059230 Msa0433610:intron 40.0%
AAAGTTGCATCAGTAACCTC+TGG + chr3_2:86059247-86059266 None:intergenic 40.0%
TCAACTTCTCACCACTAACA+AGG + chr3_2:86059393-86059412 None:intergenic 40.0%
! CTCAGTCTTGCAAGACATTT+TGG - chr3_2:86059455-86059474 Msa0433610:intron 40.0%
GTTATGTGGGATCACAAAAC+TGG - chr3_2:86059531-86059550 Msa0433610:intron 40.0%
TGTTTCTTTCCGTGATCATC+AGG - chr3_2:86059575-86059594 Msa0433610:intron 40.0%
TCATGATCTCCTCAGTTCAT+TGG + chr3_2:86059642-86059661 None:intergenic 40.0%
AGATGCAATTGGGCAACTAA+AGG - chr3_2:86060012-86060031 Msa0433610:intron 40.0%
! GTACTCACTAATGGATCTTC+AGG - chr3_2:86060087-86060106 Msa0433610:intron 40.0%
! ACCAAAGCCTTTTACTCACT+AGG - chr3_2:86060187-86060206 Msa0433610:intron 40.0%
ACCTAGTGAGTAAAAGGCTT+TGG + chr3_2:86060191-86060210 None:intergenic 40.0%
! AAAGCCTTTTACTCACTAGG+TGG - chr3_2:86060190-86060209 Msa0433610:intron 40.0%
! AAGCCTTTTACTCACTAGGT+GGG - chr3_2:86060191-86060210 Msa0433610:intron 40.0%
! GAGAGAGTATGCATCAAAAC+TGG + chr3_2:86060456-86060475 None:intergenic 40.0%
!! GTTTTGATGCATACTCTCTC+CGG - chr3_2:86060456-86060475 Msa0433610:intron 40.0%
TTTCCACTTGGTTGCTAGAT+TGG + chr3_2:86060646-86060665 None:intergenic 40.0%
!! CTTGTTCTTTGGTTTGACTG+TGG + chr3_2:86060675-86060694 None:intergenic 40.0%
AGTCATTGTTGGACCAAACT+GGG + chr3_2:86060744-86060763 None:intergenic 40.0%
AAGTCATTGTTGGACCAAAC+TGG + chr3_2:86060745-86060764 None:intergenic 40.0%
AAATTAGGTGTGCTCTTGGA+GGG + chr3_2:86060855-86060874 None:intergenic 40.0%
GTAGAAATTAGGTGTGCTCT+TGG + chr3_2:86060859-86060878 None:intergenic 40.0%
TCGGGAAAAGGGTAGAAATT+AGG + chr3_2:86060870-86060889 None:intergenic 40.0%
CTCAATGATTTCACTACCCA+AGG - chr3_2:86060912-86060931 Msa0433610:intron 40.0%
! CTAAGGTTTGGTCCCATTTA+GGG + chr3_2:86060972-86060991 None:intergenic 40.0%
GAATCTTGAGAGACCAAAAG+AGG + chr3_2:86061016-86061035 None:intergenic 40.0%
GAATCTTGGAACCAAAAGAG+GGG + chr3_2:86061125-86061144 None:intergenic 40.0%
GTGAATCTTGGAACCAAAAG+AGG + chr3_2:86061127-86061146 None:intergenic 40.0%
GGTCTTTGAGTGAGATTCAA+AGG + chr3_2:86061158-86061177 None:intergenic 40.0%
GAACTTAGGCTAAGGTTTGA+GGG + chr3_2:86061179-86061198 None:intergenic 40.0%
!! CTTTTAGGGAACTTAGGCTA+AGG + chr3_2:86061187-86061206 None:intergenic 40.0%
!! AGGGAACTTTTAGGGAACTT+AGG + chr3_2:86061193-86061212 None:intergenic 40.0%
! ACCAAAGGAGGGAACTTTTA+GGG + chr3_2:86061201-86061220 None:intergenic 40.0%
! AACCAAAGGAGGGAACTTTT+AGG + chr3_2:86061202-86061221 None:intergenic 40.0%
ACTCTCATGAAACCAAAGGA+GGG + chr3_2:86061212-86061231 None:intergenic 40.0%
ATGTTTAATCCTGGCGCAAT+TGG + chr3_2:86061283-86061302 None:intergenic 40.0%
CCTCTAATCATGGCATGATT+TGG + chr3_2:86061323-86061342 None:intergenic 40.0%
CCAAATCATGCCATGATTAG+AGG - chr3_2:86061320-86061339 Msa0433610:intron 40.0%
GTCTATATTAACTGACTGGC+TGG + chr3_2:86061710-86061729 None:intergenic 40.0%
AGGTCAAGATAACAGCAATG+AGG - chr3_2:86062022-86062041 Msa0433610:five_prime_UTR 40.0%
AAGGTTGCCAACATAAACTG+TGG + chr3_2:86062075-86062094 None:intergenic 40.0%
ACCATTTGGGAACGAACCAA+CGG - chr3_2:86055420-86055439 Msa0433610:CDS 45.0%
ATCTAATCTCCATCCCATCC+AGG - chr3_2:86055482-86055501 Msa0433610:intron 45.0%
GCGAATCGGTGAATGAAATC+TGG + chr3_2:86055523-86055542 None:intergenic 45.0%
CAACAGATGTATCACCATCC+TGG - chr3_2:86055729-86055748 Msa0433610:intron 45.0%
GAAATTGGACAGCGGAAGAT+TGG + chr3_2:86056177-86056196 None:intergenic 45.0%
GGTATCTTCCTATTGTTGCC+AGG - chr3_2:86056771-86056790 Msa0433610:intron 45.0%
!! CATGCAGAAGCATCAAAACC+AGG + chr3_2:86056878-86056897 None:intergenic 45.0%
! CACTCTGAAAAACTTCTGCG+AGG + chr3_2:86057194-86057213 None:intergenic 45.0%
!! GCAGAAGTTTTTCAGAGTGC+TGG - chr3_2:86057195-86057214 Msa0433610:intron 45.0%
! GCGATGTCCATCTACTGATT+AGG + chr3_2:86057616-86057635 None:intergenic 45.0%
GTGGAAGCAAATGTAGGGAA+AGG + chr3_2:86057795-86057814 None:intergenic 45.0%
GTAGAGGTGATAGGTTGTCA+AGG - chr3_2:86058095-86058114 Msa0433610:intron 45.0%
GAAAACTCTTCGTTGGCACT+TGG + chr3_2:86058212-86058231 None:intergenic 45.0%
GAGCAGTAGAGTTCTCTAGA+AGG + chr3_2:86058243-86058262 None:intergenic 45.0%
ACTCTACTGCTCGATGAATG+AGG - chr3_2:86058251-86058270 Msa0433610:intron 45.0%
! TAGTTATCTGCCTTGCTGTG+GGG - chr3_2:86058489-86058508 Msa0433610:intron 45.0%
GAAACAGCTGTAGAGCCATT+AGG + chr3_2:86058880-86058899 None:intergenic 45.0%
GGCATATGCTAATAGCAGCA+GGG - chr3_2:86059058-86059077 Msa0433610:intron 45.0%
ATATGCTAATAGCAGCAGGG+AGG - chr3_2:86059061-86059080 Msa0433610:intron 45.0%
!! TGTTGGTGATTTGAGTCCAG+AGG - chr3_2:86059228-86059247 Msa0433610:intron 45.0%
AAAGGGGGAAAAAAGCAACG+AGG + chr3_2:86059310-86059329 None:intergenic 45.0%
CAGTGATGCTAGGGTTATGT+GGG - chr3_2:86059518-86059537 Msa0433610:intron 45.0%
CACAAAACTGGTCGCTCAAA+AGG - chr3_2:86059543-86059562 Msa0433610:intron 45.0%
ACTGGTCGCTCAAAAGGATA+TGG - chr3_2:86059549-86059568 Msa0433610:intron 45.0%
AGAGACCAACCAATGAACTG+AGG - chr3_2:86059630-86059649 Msa0433610:intron 45.0%
GATCTCCTCAGTTCATTGGT+TGG + chr3_2:86059638-86059657 None:intergenic 45.0%
CAGGTAAATGGCTGGGAAAT+AGG - chr3_2:86059983-86060002 Msa0433610:intron 45.0%
AATTGGGCAACTAAAGGAGC+TGG - chr3_2:86060018-86060037 Msa0433610:intron 45.0%
! AGCCTTTTACTCACTAGGTG+GGG - chr3_2:86060192-86060211 Msa0433610:intron 45.0%
AACCCCACCTAGTGAGTAAA+AGG + chr3_2:86060197-86060216 None:intergenic 45.0%
! TTTTACTCACTAGGTGGGGT+TGG - chr3_2:86060196-86060215 Msa0433610:intron 45.0%
GCTAGTGACTGTTTGGTTGT+TGG + chr3_2:86060604-86060623 None:intergenic 45.0%
GATCCAATCTAGCAACCAAG+TGG - chr3_2:86060640-86060659 Msa0433610:intron 45.0%
!! CTGTGGTTTTGCTTTCCACT+TGG + chr3_2:86060658-86060677 None:intergenic 45.0%
GTCCAACAATGACTTACGTC+TGG - chr3_2:86060750-86060769 Msa0433610:intron 45.0%
CTCCAGACGTAAGTCATTGT+TGG + chr3_2:86060755-86060774 None:intergenic 45.0%
CAACAATGACTTACGTCTGG+AGG - chr3_2:86060753-86060772 Msa0433610:intron 45.0%
GAAATTAGGTGTGCTCTTGG+AGG + chr3_2:86060856-86060875 None:intergenic 45.0%
CGAGAAGAGATTCGGGAAAA+GGG + chr3_2:86060881-86060900 None:intergenic 45.0%
ACGAGAAGAGATTCGGGAAA+AGG + chr3_2:86060882-86060901 None:intergenic 45.0%
TTGGTCACGAGAAGAGATTC+GGG + chr3_2:86060888-86060907 None:intergenic 45.0%
CTTGGTCACGAGAAGAGATT+CGG + chr3_2:86060889-86060908 None:intergenic 45.0%
! GCTAAGGTTTGGTCCCATTT+AGG + chr3_2:86060973-86060992 None:intergenic 45.0%
TGGTGTCTTTGTGAGCAACT+TGG + chr3_2:86061041-86061060 None:intergenic 45.0%
!!! GAAAGGGTTGGTACCTTTTG+GGG + chr3_2:86061094-86061113 None:intergenic 45.0%
!!! GGAAAGGGTTGGTACCTTTT+GGG + chr3_2:86061095-86061114 None:intergenic 45.0%
AACCAAAAGAGGGGACTCTT+GGG + chr3_2:86061116-86061135 None:intergenic 45.0%
AAGGGTCAAGACGTGAATCT+TGG + chr3_2:86061139-86061158 None:intergenic 45.0%
GGAACTTAGGCTAAGGTTTG+AGG + chr3_2:86061180-86061199 None:intergenic 45.0%
TCCCTAAAAGTTCCCTCCTT+TGG - chr3_2:86061197-86061216 Msa0433610:intron 45.0%
GACTCTCATGAAACCAAAGG+AGG + chr3_2:86061213-86061232 None:intergenic 45.0%
TCATGAGAGTCCCCAACAAA+TGG - chr3_2:86061222-86061241 Msa0433610:intron 45.0%
CATGAGAGTCCCCAACAAAT+GGG - chr3_2:86061223-86061242 Msa0433610:intron 45.0%
! TCATGGCATGATTTGGGCAA+CGG + chr3_2:86061316-86061335 None:intergenic 45.0%
CATCCAAAATTGTGGCACGA+TGG + chr3_2:86061346-86061365 None:intergenic 45.0%
!! AATAACAAATATTAAAAATT+GGG + chr3_2:86056810-86056829 None:intergenic 5.0%
!! AAATAACAAATATTAAAAAT+TGG + chr3_2:86056811-86056830 None:intergenic 5.0%
!!! ATTTTTAATATTTGTTATTT+TGG - chr3_2:86056811-86056830 Msa0433610:intron 5.0%
GTTCGTTCCCAAATGGTGTG+TGG + chr3_2:86055417-86055436 None:intergenic 50.0%
CCATTTGGGAACGAACCAAC+GGG - chr3_2:86055421-86055440 Msa0433610:CDS 50.0%
TTGAGTGCGTACCTGAGTCA+TGG + chr3_2:86055772-86055791 None:intergenic 50.0%
TAGATGGAGCCTGTACCAAG+TGG - chr3_2:86056842-86056861 Msa0433610:intron 50.0%
GGCAGATTTCCACTTGGTAC+AGG + chr3_2:86056854-86056873 None:intergenic 50.0%
!! GCAGAAGCATCAAAACCAGG+AGG + chr3_2:86056875-86056894 None:intergenic 50.0%
ATGCCGTAGTGTGTGAGTGT+TGG - chr3_2:86056895-86056914 Msa0433610:intron 50.0%
CTCATCCTTACAAAACCGGC+TGG - chr3_2:86057967-86057986 Msa0433610:intron 50.0%
CTACTGCTCGATGAATGAGG+TGG - chr3_2:86058254-86058273 Msa0433610:intron 50.0%
GGGCATATGCTAATAGCAGC+AGG - chr3_2:86059057-86059076 Msa0433610:intron 50.0%
GCAGTGATGCTAGGGTTATG+TGG - chr3_2:86059517-86059536 Msa0433610:intron 50.0%
TTCCCAGCCATTTACCTGCA+CGG + chr3_2:86059981-86060000 None:intergenic 50.0%
CATGGGATGGGAAACACATG+AGG + chr3_2:86061064-86061083 None:intergenic 50.0%
!! CCTTTTGGGGAGAGGTTCAT+GGG + chr3_2:86061081-86061100 None:intergenic 50.0%
!! ACCTTTTGGGGAGAGGTTCA+TGG + chr3_2:86061082-86061101 None:intergenic 50.0%
!!! GGGAAAGGGTTGGTACCTTT+TGG + chr3_2:86061096-86061115 None:intergenic 50.0%
AAGAGGGGACTCTTGGGAAA+GGG + chr3_2:86061110-86061129 None:intergenic 50.0%
AAAGAGGGGACTCTTGGGAA+AGG + chr3_2:86061111-86061130 None:intergenic 50.0%
! TTCCCAAGAGTCCCCTCTTT+TGG - chr3_2:86061111-86061130 Msa0433610:intron 50.0%
GAACCAAAAGAGGGGACTCT+TGG + chr3_2:86061117-86061136 None:intergenic 50.0%
GGGGACTCTCATGAAACCAA+AGG + chr3_2:86061216-86061235 None:intergenic 50.0%
GGCGCAATTGGAACAGGTAT+AGG + chr3_2:86061271-86061290 None:intergenic 50.0%
ATACCTGTTCCAATTGCGCC+AGG - chr3_2:86061271-86061290 Msa0433610:intron 50.0%
AATCCTGGCGCAATTGGAAC+AGG + chr3_2:86061277-86061296 None:intergenic 50.0%
! AGGCCATCGTGCCACAATTT+TGG - chr3_2:86061340-86061359 Msa0433610:intron 50.0%
!! CCCGTTGGTTCGTTCCCAAA+TGG + chr3_2:86055424-86055443 None:intergenic 55.0%
AGTGCGTACCTGAGTCATGG+CGG + chr3_2:86055769-86055788 None:intergenic 55.0%
CCAGGAGGCAGATTTCCACT+TGG + chr3_2:86056860-86056879 None:intergenic 55.0%
CCAAGTGGAAATCTGCCTCC+TGG - chr3_2:86056857-86056876 Msa0433610:intron 55.0%
TGAGCTTGCACCCAGCAAGA+GGG + chr3_2:86057221-86057240 None:intergenic 55.0%
ATGAGCTTGCACCCAGCAAG+AGG + chr3_2:86057222-86057241 None:intergenic 55.0%
GATGGACATCGCACTAGCAG+TGG - chr3_2:86057624-86057643 Msa0433610:intron 55.0%
CGCACTAGCAGTGGAGTGAA+AGG - chr3_2:86057633-86057652 Msa0433610:intron 55.0%
!! CCTTGCCAGCCGGTTTTGTA+AGG + chr3_2:86057975-86057994 None:intergenic 55.0%
CCTTACAAAACCGGCTGGCA+AGG - chr3_2:86057972-86057991 Msa0433610:intron 55.0%
AAAACCGGCTGGCAAGGTGA+GGG - chr3_2:86057978-86057997 Msa0433610:intron 55.0%
TAAACCCTCACCTTGCCAGC+CGG + chr3_2:86057985-86058004 None:intergenic 55.0%
GCTGGCAAGGTGAGGGTTTA+GGG - chr3_2:86057985-86058004 Msa0433610:intron 55.0%
TCTTCGTTGGCACTTGGCAC+AGG + chr3_2:86058206-86058225 None:intergenic 55.0%
CTCTCTCAAGCTCTCGCTCT+CGG + chr3_2:86058393-86058412 None:intergenic 55.0%
TAACTGTGCACCCCACAGCA+AGG + chr3_2:86058502-86058521 None:intergenic 55.0%
TCATGCGCCGTGCAGGTAAA+TGG - chr3_2:86059971-86059990 Msa0433610:intron 55.0%
TGGGCAACTAAAGGAGCTGG+TGG - chr3_2:86060021-86060040 Msa0433610:intron 55.0%
GGGATGGGAAACACATGAGG+TGG + chr3_2:86061061-86061080 None:intergenic 55.0%
TGGGGAGAGGTTCATGGGAT+GGG + chr3_2:86061076-86061095 None:intergenic 55.0%
TTGGGGAGAGGTTCATGGGA+TGG + chr3_2:86061077-86061096 None:intergenic 55.0%
CCCATGAACCTCTCCCCAAA+AGG - chr3_2:86061078-86061097 Msa0433610:intron 55.0%
!! GGTTGGTACCTTTTGGGGAG+AGG + chr3_2:86061089-86061108 None:intergenic 55.0%
GGCACGATGGCCTCTAATCA+TGG + chr3_2:86061333-86061352 None:intergenic 55.0%
! GCGCCGTCCATCACTTCTTT+TGG - chr3_2:86061823-86061842 Msa0433610:five_prime_UTR 55.0%
TATTGCTGCTCGACGCCCGT+TGG + chr3_2:86055439-86055458 None:intergenic 60.0%
TACCTGAGTCATGGCGGCAG+CGG + chr3_2:86055763-86055782 None:intergenic 60.0%
!! AGAGTGCTGGCCCTCTTGCT+GGG - chr3_2:86057208-86057227 Msa0433610:intron 60.0%
CAAAACCGGCTGGCAAGGTG+AGG - chr3_2:86057977-86057996 Msa0433610:intron 60.0%
GGCTGGCAAGGTGAGGGTTT+AGG - chr3_2:86057984-86058003 Msa0433610:intron 60.0%
GTTGGCACTTGGCACAGGTC+AGG + chr3_2:86058201-86058220 None:intergenic 60.0%
GCGCTGCAGATGCTCGATCA+TGG + chr3_2:86058684-86058703 None:intergenic 60.0%
AGCAGCAGGGAGGATACCTC+AGG - chr3_2:86059071-86059090 Msa0433610:intron 60.0%
TGACGTTTCATGCGCCGTGC+AGG - chr3_2:86059964-86059983 Msa0433610:intron 60.0%
CGCCGTGCAGGTAAATGGCT+GGG - chr3_2:86059976-86059995 Msa0433610:intron 60.0%
GGGGACTCTTGGGAAAGGGT+TGG + chr3_2:86061106-86061125 None:intergenic 60.0%
!! CAGAGTGCTGGCCCTCTTGC+TGG - chr3_2:86057207-86057226 Msa0433610:intron 65.0%
GCGCCGTGCAGGTAAATGGC+TGG - chr3_2:86059975-86059994 Msa0433610:intron 65.0%
CAGCGGCGAGCATGCCAGGA+TGG + chr3_2:86055746-86055765 None:intergenic 70.0%
CGCCGCTGCCGCCATGACTC+AGG - chr3_2:86055758-86055777 Msa0433610:intron 75.0%
! GCGGCAGCGGCGAGCATGCC+AGG + chr3_2:86055750-86055769 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 86055331 86062139 86055331 ID=Msa0433610;Name=Msa0433610
chr3_2 mRNA 86055331 86062139 86055331 ID=Msa0433610-mRNA-1;Parent=Msa0433610;Name=Msa0433610-mRNA-1;_AED=0.15;_eAED=0.15;_QI=206|1|0.90|1|0.9|0.81|11|0|289
chr3_2 exon 86055331 86055452 86055331 ID=Msa0433610-mRNA-1:exon:24815;Parent=Msa0433610-mRNA-1
chr3_2 exon 86057362 86057484 86057362 ID=Msa0433610-mRNA-1:exon:24814;Parent=Msa0433610-mRNA-1
chr3_2 exon 86057596 86057626 86057596 ID=Msa0433610-mRNA-1:exon:24813;Parent=Msa0433610-mRNA-1
chr3_2 exon 86057874 86057949 86057874 ID=Msa0433610-mRNA-1:exon:24812;Parent=Msa0433610-mRNA-1
chr3_2 exon 86058171 86058258 86058171 ID=Msa0433610-mRNA-1:exon:24811;Parent=Msa0433610-mRNA-1
chr3_2 exon 86058378 86058439 86058378 ID=Msa0433610-mRNA-1:exon:24810;Parent=Msa0433610-mRNA-1
chr3_2 exon 86058736 86058812 86058736 ID=Msa0433610-mRNA-1:exon:24809;Parent=Msa0433610-mRNA-1
chr3_2 exon 86060216 86060318 86060216 ID=Msa0433610-mRNA-1:exon:24808;Parent=Msa0433610-mRNA-1
chr3_2 exon 86060564 86060625 86060564 ID=Msa0433610-mRNA-1:exon:24807;Parent=Msa0433610-mRNA-1
chr3_2 exon 86061691 86061849 86061691 ID=Msa0433610-mRNA-1:exon:24806;Parent=Msa0433610-mRNA-1
chr3_2 exon 86061967 86062139 86061967 ID=Msa0433610-mRNA-1:exon:24805;Parent=Msa0433610-mRNA-1
chr3_2 five_prime_UTR 86061967 86062139 86061967 ID=Msa0433610-mRNA-1:five_prime_utr;Parent=Msa0433610-mRNA-1
chr3_2 five_prime_UTR 86061817 86061849 86061817 ID=Msa0433610-mRNA-1:five_prime_utr;Parent=Msa0433610-mRNA-1
chr3_2 CDS 86061691 86061816 86061691 ID=Msa0433610-mRNA-1:cds;Parent=Msa0433610-mRNA-1
chr3_2 CDS 86060564 86060625 86060564 ID=Msa0433610-mRNA-1:cds;Parent=Msa0433610-mRNA-1
chr3_2 CDS 86060216 86060318 86060216 ID=Msa0433610-mRNA-1:cds;Parent=Msa0433610-mRNA-1
chr3_2 CDS 86058736 86058812 86058736 ID=Msa0433610-mRNA-1:cds;Parent=Msa0433610-mRNA-1
chr3_2 CDS 86058378 86058439 86058378 ID=Msa0433610-mRNA-1:cds;Parent=Msa0433610-mRNA-1
chr3_2 CDS 86058171 86058258 86058171 ID=Msa0433610-mRNA-1:cds;Parent=Msa0433610-mRNA-1
chr3_2 CDS 86057874 86057949 86057874 ID=Msa0433610-mRNA-1:cds;Parent=Msa0433610-mRNA-1
chr3_2 CDS 86057596 86057626 86057596 ID=Msa0433610-mRNA-1:cds;Parent=Msa0433610-mRNA-1
chr3_2 CDS 86057362 86057484 86057362 ID=Msa0433610-mRNA-1:cds;Parent=Msa0433610-mRNA-1
chr3_2 CDS 86055331 86055452 86055331 ID=Msa0433610-mRNA-1:cds;Parent=Msa0433610-mRNA-1
Gene Sequence

>Msa0433610

ATGCAACAGAGGCTAAAGTTGCAACAACAACAACAACAACAACAAGCACTCATGCAGCAAGCTTTGCTTCAACAACAACAGATGTATCACCATCCTGGCATGCTCGCCGCTGCCGCCATGACTCAGATGGAGCCTGTACCAAGTGGAAATCTGCCTCCTGGTTTTGATGCTTCTGCATGCCGTAGTGTTTATGTAGGAAATATTCATGTAAACGTCACTGATAAACTCCTCGCAGAAGTTTTTCAGAGTGCTGGCCCTCTTGCTGGGTGCAAGCTCATACGAAAAGAAAAGTCCTCTTATGGTTTTGTGGACTACCATGATCGAGCATCTGCAGCGCTTGCAATAATGACATTACATGGACGGCAACTATATGGTCAAGCACTAAAGGTGAATTGGGCATATGCTAATAGCAGCAGGGAGGATACCTCAGGGCACTTCAATGTTTTTGTTGGTGATTTGAGTCCAGAGGTTACTGATGCAACTTTATTTGCATGCTTTTCAGTCTATACTACTTGTTCTGATGCTAGGGTTATGTGGGATCACAAAACTGGTCGCTCAAAAGGATATGGTTTTGTTTCTTTCCGTGATCATCAGGATGCCCAAAGTGCCATAAATGATATGACAGGTAAATGGCTGGGAAATAGGCAAATAAGATGCAATTGGGCAACTAAAGGAGCTGGTGGCAGCTCAAACGAAGAGAAGATCAATGACAGCCAAAATGCTGTTGTACTCACTAATGGATCTTCAGATGGAGGTCAAGATAACAGCAATGAGGATGCTCCTGAAAACAATCCTTCATACACCACAGTTTATGTTGGCAACCTTCCCCATGATGTAAGTTATTATGTGGGATTGGTTTGGTTTGTTTAG
Protein sequence

>Msa0433610

MQQRLKLQQQQQQQQALMQQALLQQQQMYHHPGMLAAAAMTQMEPVPSGNLPPGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGHFNVFVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGKWLGNRQIRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTTVYVGNLPHDVSYYVGLVWFV*