Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974060 | XP_013450797.1 | 94.517 | 693 | 16 | 1 | 1 | 671 | 6 | 698 | 0.0 | 1342 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974060 | sp|Q9LII8|KLCR2_ARATH | 61.912 | 680 | 206 | 13 | 12 | 664 | 2 | 655 | 0.0 | 797 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974060 | A0A072U668 | 94.517 | 693 | 16 | 1 | 1 | 671 | 6 | 698 | 0.0 | 1342 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa0974060 | 0.815377 | 9.538625e-52 | -8.615850e-47 |
| Msa0002710 | Msa0974060 | 0.810639 | 1.043072e-50 | -8.615850e-47 |
| Msa0014570 | Msa0974060 | 0.801145 | 1.033688e-48 | -8.615850e-47 |
| Msa0015390 | Msa0974060 | 0.814887 | 1.225307e-51 | -8.615850e-47 |
| Msa0017510 | Msa0974060 | 0.820516 | 6.581483e-53 | -8.615850e-47 |
| Msa0025330 | Msa0974060 | 0.839139 | 1.894500e-57 | -8.615850e-47 |
| Msa0045770 | Msa0974060 | 0.817761 | 2.787983e-52 | -8.615850e-47 |
| Msa0046100 | Msa0974060 | 0.808988 | 2.362665e-50 | -8.615850e-47 |
| Msa0048000 | Msa0974060 | 0.805826 | 1.106416e-49 | -8.615850e-47 |
| Msa0052680 | Msa0974060 | 0.800898 | 1.161096e-48 | -8.615850e-47 |
| Msa0052730 | Msa0974060 | 0.824778 | 6.713286e-54 | -8.615850e-47 |
| Msa0061340 | Msa0974060 | 0.805838 | 1.100024e-49 | -8.615850e-47 |
| Msa0072900 | Msa0974060 | 0.842221 | 2.950994e-58 | -8.615850e-47 |
| Msa0077450 | Msa0974060 | 0.814300 | 1.653006e-51 | -8.615850e-47 |
| Msa0081520 | Msa0974060 | 0.821099 | 4.832863e-53 | -8.615850e-47 |
| Msa0087470 | Msa0974060 | 0.814107 | 1.822954e-51 | -8.615850e-47 |
| Msa0094850 | Msa0974060 | 0.814465 | 1.519749e-51 | -8.615850e-47 |
| Msa0097090 | Msa0974060 | 0.816438 | 5.530670e-52 | -8.615850e-47 |
| Msa0108390 | Msa0974060 | 0.810829 | 9.490322e-51 | -8.615850e-47 |
| Msa0110970 | Msa0974060 | 0.801625 | 8.243879e-49 | -8.615850e-47 |
| Msa0116790 | Msa0974060 | 0.828194 | 1.029712e-54 | -8.615850e-47 |
| Msa0615420 | Msa0974060 | 0.823940 | 1.056521e-53 | -8.615850e-47 |
| Msa0622650 | Msa0974060 | 0.828214 | 1.018251e-54 | -8.615850e-47 |
| Msa0623150 | Msa0974060 | 0.807795 | 4.245283e-50 | -8.615850e-47 |
| Msa0623330 | Msa0974060 | 0.811807 | 5.820528e-51 | -8.615850e-47 |
| Msa0624510 | Msa0974060 | 0.808648 | 2.793021e-50 | -8.615850e-47 |
| Msa0626450 | Msa0974060 | 0.828905 | 6.931450e-55 | -8.615850e-47 |
| Msa0626490 | Msa0974060 | 0.829489 | 5.001413e-55 | -8.615850e-47 |
| Msa0642720 | Msa0974060 | 0.803010 | 4.273823e-49 | -8.615850e-47 |
| Msa0644980 | Msa0974060 | 0.801242 | 9.877446e-49 | -8.615850e-47 |
| Msa0648900 | Msa0974060 | 0.806897 | 6.580665e-50 | -8.615850e-47 |
| Msa0650070 | Msa0974060 | 0.816030 | 6.823446e-52 | -8.615850e-47 |
| Msa0656000 | Msa0974060 | 0.803664 | 3.129478e-49 | -8.615850e-47 |
| Msa0657750 | Msa0974060 | 0.808338 | 3.253670e-50 | -8.615850e-47 |
| Msa0657970 | Msa0974060 | 0.800521 | 1.386245e-48 | -8.615850e-47 |
| Msa0660310 | Msa0974060 | 0.823981 | 1.033781e-53 | -8.615850e-47 |
| Msa0664600 | Msa0974060 | 0.832504 | 9.102187e-56 | -8.615850e-47 |
| Msa0683730 | Msa0974060 | 0.816404 | 5.628802e-52 | -8.615850e-47 |
| Msa0684500 | Msa0974060 | 0.805338 | 1.400711e-49 | -8.615850e-47 |
| Msa0689760 | Msa0974060 | 0.812018 | 5.235759e-51 | -8.615850e-47 |
| Msa0691050 | Msa0974060 | 0.805862 | 1.087679e-49 | -8.615850e-47 |
| Msa0692060 | Msa0974060 | 0.800310 | 1.530438e-48 | -8.615850e-47 |
| Msa0693380 | Msa0974060 | 0.829926 | 3.916474e-55 | -8.615850e-47 |
| Msa0698640 | Msa0974060 | 0.831835 | 1.332627e-55 | -8.615850e-47 |
| Msa0712590 | Msa0974060 | 0.831826 | 1.339422e-55 | -8.615850e-47 |
| Msa0716860 | Msa0974060 | 0.804285 | 2.325041e-49 | -8.615850e-47 |
| Msa0721280 | Msa0974060 | 0.812355 | 4.419579e-51 | -8.615850e-47 |
| Msa0723990 | Msa0974060 | 0.820182 | 7.852660e-53 | -8.615850e-47 |
| Msa0742740 | Msa0974060 | 0.805435 | 1.337010e-49 | -8.615850e-47 |
| Msa0751260 | Msa0974060 | 0.820015 | 8.572879e-53 | -8.615850e-47 |
| Msa0752940 | Msa0974060 | 0.817900 | 2.593667e-52 | -8.615850e-47 |
| Msa0764570 | Msa0974060 | 0.803438 | 3.485693e-49 | -8.615850e-47 |
| Msa0784060 | Msa0974060 | 0.808474 | 3.042084e-50 | -8.615850e-47 |
| Msa0795070 | Msa0974060 | 0.809625 | 1.724806e-50 | -8.615850e-47 |
| Msa0816710 | Msa0974060 | 0.832661 | 8.322885e-56 | -8.615850e-47 |
| Msa0823820 | Msa0974060 | 0.816343 | 5.806902e-52 | -8.615850e-47 |
| Msa0828920 | Msa0974060 | 0.810610 | 1.058232e-50 | -8.615850e-47 |
| Msa0121090 | Msa0974060 | 0.843419 | 1.417711e-58 | -8.615850e-47 |
| Msa0133720 | Msa0974060 | 0.801514 | 8.684843e-49 | -8.615850e-47 |
| Msa0143540 | Msa0974060 | 0.808627 | 2.822470e-50 | -8.615850e-47 |
| Msa0143560 | Msa0974060 | 0.816770 | 4.658293e-52 | -8.615850e-47 |
| Msa0152400 | Msa0974060 | 0.813821 | 2.107789e-51 | -8.615850e-47 |
| Msa0154320 | Msa0974060 | 0.813409 | 2.597328e-51 | -8.615850e-47 |
| Msa0157290 | Msa0974060 | 0.820907 | 5.352917e-53 | -8.615850e-47 |
| Msa0160130 | Msa0974060 | 0.836828 | 7.443707e-57 | -8.615850e-47 |
| Msa0170140 | Msa0974060 | 0.829479 | 5.031491e-55 | -8.615850e-47 |
| Msa0173890 | Msa0974060 | 0.837028 | 6.616568e-57 | -8.615850e-47 |
| Msa0186640 | Msa0974060 | 0.818107 | 2.329562e-52 | -8.615850e-47 |
| Msa0187030 | Msa0974060 | 0.805401 | 1.358963e-49 | -8.615850e-47 |
| Msa0191890 | Msa0974060 | 0.803809 | 2.920112e-49 | -8.615850e-47 |
| Msa0195630 | Msa0974060 | 0.836622 | 8.399038e-57 | -8.615850e-47 |
| Msa0200560 | Msa0974060 | 0.803524 | 3.345952e-49 | -8.615850e-47 |
| Msa0206840 | Msa0974060 | 0.812620 | 3.868173e-51 | -8.615850e-47 |
| Msa0218810 | Msa0974060 | 0.822161 | 2.746195e-53 | -8.615850e-47 |
| Msa0237310 | Msa0974060 | 0.804195 | 2.427709e-49 | -8.615850e-47 |
| Msa0237410 | Msa0974060 | 0.834128 | 3.585031e-56 | -8.615850e-47 |
| Msa0388960 | Msa0974060 | 0.835008 | 2.154601e-56 | -8.615850e-47 |
| Msa0392380 | Msa0974060 | 0.818354 | 2.048266e-52 | -8.615850e-47 |
| Msa0393440 | Msa0974060 | 0.812917 | 3.331233e-51 | -8.615850e-47 |
| Msa0403660 | Msa0974060 | 0.803722 | 3.044106e-49 | -8.615850e-47 |
| Msa0410650 | Msa0974060 | 0.836840 | 7.393477e-57 | -8.615850e-47 |
| Msa0411410 | Msa0974060 | 0.818565 | 1.834444e-52 | -8.615850e-47 |
| Msa0417880 | Msa0974060 | 0.836347 | 9.868556e-57 | -8.615850e-47 |
| Msa0422280 | Msa0974060 | 0.803972 | 2.700718e-49 | -8.615850e-47 |
| Msa0422850 | Msa0974060 | 0.809016 | 2.329862e-50 | -8.615850e-47 |
| Msa0422930 | Msa0974060 | 0.810685 | 1.019132e-50 | -8.615850e-47 |
| Msa0436370 | Msa0974060 | 0.803582 | 3.254575e-49 | -8.615850e-47 |
| Msa0436880 | Msa0974060 | 0.801119 | 1.046345e-48 | -8.615850e-47 |
| Msa0439970 | Msa0974060 | 0.800928 | 1.144750e-48 | -8.615850e-47 |
| Msa0440320 | Msa0974060 | 0.819083 | 1.399376e-52 | -8.615850e-47 |
| Msa0452960 | Msa0974060 | 0.822893 | 1.856796e-53 | -8.615850e-47 |
| Msa0464680 | Msa0974060 | 0.807679 | 4.493187e-50 | -8.615850e-47 |
| Msa0467430 | Msa0974060 | 0.810701 | 1.011321e-50 | -8.615850e-47 |
| Msa0468800 | Msa0974060 | 0.811249 | 7.694638e-51 | -8.615850e-47 |
| Msa0469160 | Msa0974060 | 0.803310 | 3.705736e-49 | -8.615850e-47 |
| Msa0479170 | Msa0974060 | 0.802136 | 6.473711e-49 | -8.615850e-47 |
| Msa0243250 | Msa0974060 | 0.817577 | 3.068732e-52 | -8.615850e-47 |
| Msa0243600 | Msa0974060 | 0.825906 | 3.630150e-54 | -8.615850e-47 |
| Msa0244860 | Msa0974060 | 0.827089 | 1.896338e-54 | -8.615850e-47 |
| Msa0245940 | Msa0974060 | 0.811161 | 8.038784e-51 | -8.615850e-47 |
| Msa0248970 | Msa0974060 | 0.815096 | 1.101136e-51 | -8.615850e-47 |
| Msa0251050 | Msa0974060 | 0.845277 | 4.490243e-59 | -8.615850e-47 |
| Msa0258310 | Msa0974060 | 0.843310 | 1.516260e-58 | -8.615850e-47 |
| Msa0259500 | Msa0974060 | 0.825258 | 5.171588e-54 | -8.615850e-47 |
| Msa0260810 | Msa0974060 | 0.801490 | 8.786201e-49 | -8.615850e-47 |
| Msa0274730 | Msa0974060 | 0.802142 | 6.456340e-49 | -8.615850e-47 |
| Msa0276920 | Msa0974060 | 0.814126 | 1.805451e-51 | -8.615850e-47 |
| Msa0281640 | Msa0974060 | 0.811212 | 7.836432e-51 | -8.615850e-47 |
| Msa0283450 | Msa0974060 | 0.835705 | 1.436418e-56 | -8.615850e-47 |
| Msa0283520 | Msa0974060 | 0.816338 | 5.822551e-52 | -8.615850e-47 |
| Msa0284520 | Msa0974060 | 0.800048 | 1.729860e-48 | -8.615850e-47 |
| Msa0297790 | Msa0974060 | 0.837614 | 4.684576e-57 | -8.615850e-47 |
| Msa0300180 | Msa0974060 | 0.824816 | 6.573999e-54 | -8.615850e-47 |
| Msa0305700 | Msa0974060 | 0.846143 | 2.613462e-59 | -8.615850e-47 |
| Msa0312530 | Msa0974060 | 0.800143 | 1.654523e-48 | -8.615850e-47 |
| Msa0315530 | Msa0974060 | 0.802768 | 4.797408e-49 | -8.615850e-47 |
| Msa0316800 | Msa0974060 | 0.809485 | 1.849031e-50 | -8.615850e-47 |
| Msa0319940 | Msa0974060 | 0.845482 | 3.951310e-59 | -8.615850e-47 |
| Msa0320800 | Msa0974060 | 0.801218 | 9.986926e-49 | -8.615850e-47 |
| Msa0322690 | Msa0974060 | 0.800946 | 1.135061e-48 | -8.615850e-47 |
| Msa0326520 | Msa0974060 | 0.804959 | 1.681754e-49 | -8.615850e-47 |
| Msa0327750 | Msa0974060 | 0.805237 | 1.470759e-49 | -8.615850e-47 |
| Msa0332000 | Msa0974060 | 0.831138 | 1.978419e-55 | -8.615850e-47 |
| Msa0333920 | Msa0974060 | 0.822710 | 2.047702e-53 | -8.615850e-47 |
| Msa0333930 | Msa0974060 | 0.805580 | 1.246303e-49 | -8.615850e-47 |
| Msa0334040 | Msa0974060 | 0.820251 | 7.572047e-53 | -8.615850e-47 |
| Msa0335800 | Msa0974060 | 0.844942 | 5.531327e-59 | -8.615850e-47 |
| Msa0337540 | Msa0974060 | 0.809711 | 1.652895e-50 | -8.615850e-47 |
| Msa0341540 | Msa0974060 | 0.857336 | 1.749890e-62 | -8.615850e-47 |
| Msa0342010 | Msa0974060 | 0.803649 | 3.152346e-49 | -8.615850e-47 |
| Msa0358890 | Msa0974060 | 0.823245 | 1.536530e-53 | -8.615850e-47 |
| Msa0484780 | Msa0974060 | 0.830203 | 3.352488e-55 | -8.615850e-47 |
| Msa0487500 | Msa0974060 | 0.827001 | 1.990730e-54 | -8.615850e-47 |
| Msa0488790 | Msa0974060 | 0.809317 | 2.009073e-50 | -8.615850e-47 |
| Msa0495320 | Msa0974060 | 0.811012 | 8.662010e-51 | -8.615850e-47 |
| Msa0507680 | Msa0974060 | 0.826269 | 2.975818e-54 | -8.615850e-47 |
| Msa0513160 | Msa0974060 | 0.812329 | 4.479167e-51 | -8.615850e-47 |
| Msa0520700 | Msa0974060 | 0.811206 | 7.860836e-51 | -8.615850e-47 |
| Msa0527550 | Msa0974060 | 0.803509 | 3.370113e-49 | -8.615850e-47 |
| Msa0544660 | Msa0974060 | 0.825374 | 4.852643e-54 | -8.615850e-47 |
| Msa0546680 | Msa0974060 | 0.814499 | 1.493717e-51 | -8.615850e-47 |
| Msa0547890 | Msa0974060 | 0.810263 | 1.257104e-50 | -8.615850e-47 |
| Msa0548620 | Msa0974060 | 0.810606 | 1.060217e-50 | -8.615850e-47 |
| Msa0548660 | Msa0974060 | 0.804269 | 2.342517e-49 | -8.615850e-47 |
| Msa0572420 | Msa0974060 | 0.833101 | 6.469818e-56 | -8.615850e-47 |
| Msa0572480 | Msa0974060 | 0.801427 | 9.051409e-49 | -8.615850e-47 |
| Msa0574390 | Msa0974060 | 0.801502 | 8.734088e-49 | -8.615850e-47 |
| Msa0574890 | Msa0974060 | 0.835375 | 1.741029e-56 | -8.615850e-47 |
| Msa0579660 | Msa0974060 | 0.800860 | 1.181850e-48 | -8.615850e-47 |
| Msa0601750 | Msa0974060 | 0.824125 | 9.559920e-54 | -8.615850e-47 |
| Msa0861510 | Msa0974060 | 0.830439 | 2.935511e-55 | -8.615850e-47 |
| Msa0861530 | Msa0974060 | 0.824891 | 6.311762e-54 | -8.615850e-47 |
| Msa0861600 | Msa0974060 | 0.828320 | 9.597791e-55 | -8.615850e-47 |
| Msa0863010 | Msa0974060 | 0.814647 | 1.385297e-51 | -8.615850e-47 |
| Msa0866520 | Msa0974060 | 0.806224 | 9.125560e-50 | -8.615850e-47 |
| Msa0870530 | Msa0974060 | 0.814994 | 1.160096e-51 | -8.615850e-47 |
| Msa0875290 | Msa0974060 | 0.800649 | 1.305340e-48 | -8.615850e-47 |
| Msa0878290 | Msa0974060 | 0.809321 | 2.004458e-50 | -8.615850e-47 |
| Msa0880140 | Msa0974060 | 0.819811 | 9.548184e-53 | -8.615850e-47 |
| Msa0900620 | Msa0974060 | 0.802707 | 4.937376e-49 | -8.615850e-47 |
| Msa0900730 | Msa0974060 | 0.826642 | 2.425277e-54 | -8.615850e-47 |
| Msa0903700 | Msa0974060 | 0.800472 | 1.418410e-48 | -8.615850e-47 |
| Msa0930780 | Msa0974060 | 0.817863 | 2.644840e-52 | -8.615850e-47 |
| Msa0934890 | Msa0974060 | 0.836726 | 7.902968e-57 | -8.615850e-47 |
| Msa0944030 | Msa0974060 | 0.816273 | 6.020016e-52 | -8.615850e-47 |
| Msa0969520 | Msa0974060 | 0.816396 | 5.652387e-52 | -8.615850e-47 |
| Msa0972100 | Msa0974060 | 0.803138 | 4.022546e-49 | -8.615850e-47 |
| Msa0974060 | Msa0986510 | 0.801083 | 1.064546e-48 | -8.615850e-47 |
| Msa0974060 | Msa1004010 | 0.806566 | 7.730842e-50 | -8.615850e-47 |
| Msa0974060 | Msa1005870 | 0.801321 | 9.515057e-49 | -8.615850e-47 |
| Msa0974060 | Msa1007270 | 0.800033 | 1.742585e-48 | -8.615850e-47 |
| Msa0974060 | Msa1010070 | 0.802814 | 4.692146e-49 | -8.615850e-47 |
| Msa0974060 | Msa1019000 | 0.820689 | 6.006294e-53 | -8.615850e-47 |
| Msa0974060 | Msa1020510 | 0.803681 | 3.104286e-49 | -8.615850e-47 |
| Msa0974060 | Msa1024740 | 0.842562 | 2.396847e-58 | -8.615850e-47 |
| Msa0974060 | Msa1031930 | 0.841945 | 3.491263e-58 | -8.615850e-47 |
| Msa0974060 | Msa1032170 | 0.807781 | 4.274977e-50 | -8.615850e-47 |
| Msa0974060 | Msa1045180 | 0.806115 | 9.620734e-50 | -8.615850e-47 |
| Msa0974060 | Msa1050910 | 0.813277 | 2.776345e-51 | -8.615850e-47 |
| Msa0974060 | Msa1050960 | 0.800614 | 1.326710e-48 | -8.615850e-47 |
| Msa0974060 | Msa1063500 | 0.817077 | 3.976427e-52 | -8.615850e-47 |
| Msa0974060 | Msa1071770 | 0.811768 | 5.934806e-51 | -8.615850e-47 |
| Msa0974060 | Msa1081330 | 0.804198 | 2.424044e-49 | -8.615850e-47 |
| Msa0974060 | Msa1082500 | 0.825254 | 5.183153e-54 | -8.615850e-47 |
| Msa0974060 | Msa1085200 | 0.839245 | 1.778499e-57 | -8.615850e-47 |
| Msa0974060 | Msa1087980 | 0.825231 | 5.247552e-54 | -8.615850e-47 |
| Msa0974060 | Msa1092010 | 0.804319 | 2.287259e-49 | -8.615850e-47 |
| Msa0974060 | Msa1100730 | 0.800615 | 1.326341e-48 | -8.615850e-47 |
| Msa0974060 | Msa1102770 | 0.810967 | 8.857623e-51 | -8.615850e-47 |
| Msa0974060 | Msa1108790 | 0.829612 | 4.669226e-55 | -8.615850e-47 |
| Msa0974060 | Msa1113800 | 0.816580 | 5.139693e-52 | -8.615850e-47 |
| Msa0974060 | Msa1125940 | 0.804473 | 2.124674e-49 | -8.615850e-47 |
| Msa0974060 | Msa1133220 | 0.805027 | 1.627301e-49 | -8.615850e-47 |
| Msa0974060 | Msa1137570 | 0.811519 | 6.723094e-51 | -8.615850e-47 |
| Msa0974060 | Msa1139890 | 0.808266 | 3.370484e-50 | -8.615850e-47 |
| Msa0974060 | Msa1147740 | 0.820808 | 5.639260e-53 | -8.615850e-47 |
| Msa0974060 | Msa1147900 | 0.804969 | 1.673337e-49 | -8.615850e-47 |
| Msa0974060 | Msa1151910 | 0.811695 | 6.157197e-51 | -8.615850e-47 |
| Msa0974060 | Msa1152510 | 0.829687 | 4.477983e-55 | -8.615850e-47 |
| Msa0974060 | Msa1158830 | 0.810159 | 1.324158e-50 | -8.615850e-47 |
| Msa0974060 | Msa1160500 | 0.811059 | 8.459809e-51 | -8.615850e-47 |
| Msa0974060 | Msa1173100 | 0.820647 | 6.143082e-53 | -8.615850e-47 |
| Msa0974060 | Msa1179940 | 0.807777 | 4.282155e-50 | -8.615850e-47 |
| Msa0974060 | Msa1179970 | 0.804803 | 1.812330e-49 | -8.615850e-47 |
| Msa0974060 | Msa1189470 | 0.807576 | 4.724245e-50 | -8.615850e-47 |
| Msa0974060 | Msa1193290 | 0.800166 | 1.637503e-48 | -8.615850e-47 |
| Msa0974060 | Msa1199570 | 0.821802 | 3.326084e-53 | -8.615850e-47 |
| Msa0974060 | Msa1199830 | -0.824618 | 7.319426e-54 | -8.615850e-47 |
| Msa0974060 | Msa1219580 | 0.803026 | 4.242451e-49 | -8.615850e-47 |
| Msa0974060 | Msa1221050 | 0.807150 | 5.816031e-50 | -8.615850e-47 |
| Msa0974060 | Msa1236100 | 0.812299 | 4.546325e-51 | -8.615850e-47 |
| Msa0974060 | Msa1250290 | 0.806213 | 9.175696e-50 | -8.615850e-47 |
| Msa0974060 | Msa1255190 | 0.805217 | 1.485132e-49 | -8.615850e-47 |
| Msa0974060 | Msa1276660 | 0.816796 | 4.596528e-52 | -8.615850e-47 |
| Msa0974060 | Msa1278840 | 0.805246 | 1.464515e-49 | -8.615850e-47 |
| Msa0974060 | Msa1284040 | 0.811847 | 5.703323e-51 | -8.615850e-47 |
| Msa0974060 | Msa1295630 | 0.823778 | 1.153446e-53 | -8.615850e-47 |
| Msa0974060 | Msa1306740 | 0.815671 | 8.203864e-52 | -8.615850e-47 |
| Msa0974060 | Msa1308140 | 0.811999 | 5.285232e-51 | -8.615850e-47 |
| Msa0974060 | Msa1313150 | 0.829492 | 4.995393e-55 | -8.615850e-47 |
| Msa0974060 | Msa1323050 | 0.802476 | 5.509694e-49 | -8.615850e-47 |
| Msa0974060 | Msa1328640 | 0.805453 | 1.325478e-49 | -8.615850e-47 |
| Msa0974060 | Msa1328710 | 0.814085 | 1.843297e-51 | -8.615850e-47 |
| Msa0974060 | Msa1348880 | 0.803666 | 3.126032e-49 | -8.615850e-47 |
| Msa0974060 | Msa1353470 | 0.851115 | 1.094685e-60 | -8.615850e-47 |
| Msa0974060 | Msa1356830 | 0.811666 | 6.244756e-51 | -8.615850e-47 |
| Msa0974060 | Msa1357890 | 0.808198 | 3.484931e-50 | -8.615850e-47 |
| Msa0974060 | Msa1366300 | 0.805281 | 1.439796e-49 | -8.615850e-47 |
| Msa0974060 | Msa1379850 | 0.805816 | 1.111828e-49 | -8.615850e-47 |
| Msa0974060 | Msa1398090 | 0.814095 | 1.833879e-51 | -8.615850e-47 |
| Msa0974060 | Msa1401270 | 0.802128 | 6.496943e-49 | -8.615850e-47 |
| Msa0974060 | Msa1408620 | -0.806365 | 8.521207e-50 | -8.615850e-47 |
| Msa0974060 | Msa1409870 | 0.832859 | 7.432885e-56 | -8.615850e-47 |
| Msa0974060 | Msa1410210 | 0.811483 | 6.844978e-51 | -8.615850e-47 |
| Msa0974060 | Msa1420250 | 0.812292 | 4.562197e-51 | -8.615850e-47 |
| Msa0974060 | Msa1422580 | 0.836577 | 8.623779e-57 | -8.615850e-47 |
| Msa0974060 | Msa1423880 | 0.848513 | 5.841257e-60 | -8.615850e-47 |
| Msa0974060 | Msa1437460 | 0.806256 | 8.984184e-50 | -8.615850e-47 |
| Msa0974060 | Msa1439610 | 0.822307 | 2.540176e-53 | -8.615850e-47 |
| Msa0974060 | Msa1440960 | 0.814407 | 1.564774e-51 | -8.615850e-47 |
| Msa0974060 | Msa1445190 | 0.813204 | 2.880705e-51 | -8.615850e-47 |
| Msa0974060 | Msa1452120 | 0.830509 | 2.822060e-55 | -8.615850e-47 |
| Msa0974060 | Msa1457430 | 0.824871 | 6.381645e-54 | -8.615850e-47 |
| Msa0974060 | Msa1458610 | 0.803125 | 4.046435e-49 | -8.615850e-47 |
| Msa0974060 | Msa1459180 | 0.800846 | 1.190038e-48 | -8.615850e-47 |
| Msa0974060 | Msa1460390 | 0.803722 | 3.043731e-49 | -8.615850e-47 |
| Msa0974060 | Msa1465300 | 0.831196 | 1.913924e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974060 | MtrunA17_Chr6g0450741 | 94.517 | 693 | 16 | 1 | 1 | 671 | 6 | 698 | 0.0 | 1342 |
| Msa0974060 | MtrunA17_Chr3g0117701 | 59.932 | 589 | 192 | 8 | 123 | 671 | 182 | 766 | 0.0 | 711 |
| Msa0974060 | MtrunA17_Chr3g0117701 | 55.789 | 95 | 32 | 2 | 3 | 97 | 17 | 101 | 3.67e-18 | 89.4 |
| Msa0974060 | MtrunA17_Chr8g0388631 | 62.741 | 518 | 170 | 2 | 181 | 676 | 68 | 584 | 0.0 | 681 |
| Msa0974060 | MtrunA17_Chr4g0059101 | 53.481 | 675 | 266 | 8 | 15 | 661 | 16 | 670 | 0.0 | 677 |
| Msa0974060 | MtrunA17_Chr8g0346601 | 58.541 | 521 | 188 | 4 | 177 | 673 | 49 | 565 | 0.0 | 623 |
| Msa0974060 | MtrunA17_Chr1g0184181 | 26.465 | 495 | 309 | 8 | 185 | 642 | 98 | 574 | 1.02e-38 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974060 | AT3G27960.1 | 61.912 | 680 | 206 | 13 | 12 | 664 | 2 | 655 | 0.0 | 797 |
| Msa0974060 | AT3G27960.3 | 61.912 | 680 | 206 | 13 | 12 | 664 | 2 | 655 | 0.0 | 797 |
| Msa0974060 | AT3G27960.2 | 61.165 | 618 | 188 | 12 | 12 | 602 | 2 | 594 | 0.0 | 714 |
| Msa0974060 | AT1G27500.1 | 54.617 | 639 | 253 | 7 | 50 | 661 | 14 | 642 | 0.0 | 676 |
| Msa0974060 | AT1G27500.2 | 54.617 | 639 | 253 | 7 | 50 | 661 | 25 | 653 | 0.0 | 676 |
| Msa0974060 | AT4G10840.1 | 59.357 | 529 | 181 | 4 | 181 | 677 | 79 | 605 | 0.0 | 647 |
| Msa0974060 | AT4G10840.2 | 59.031 | 454 | 153 | 3 | 181 | 602 | 79 | 531 | 0.0 | 561 |
| Msa0974060 | AT2G31240.1 | 26.434 | 488 | 323 | 9 | 185 | 643 | 116 | 596 | 4.71e-35 | 142 |
Find 146 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAAGAGGCTAGGACTATTT+TGG | 0.164311 | 6_4:-6919739 | Msa0974060:CDS |
| CCGAACAAGGCTCTCAATTT+TGG | 0.194744 | 6_4:-6920999 | Msa0974060:CDS |
| GCCACAATTTACTGTAATTT+AGG | 0.207749 | 6_4:-6920894 | Msa0974060:CDS |
| GAAATTCAAGGGCAGGTCTT+AGG | 0.218691 | 6_4:-6920702 | Msa0974060:CDS |
| TTTGGGTTTCTTCAGTTATT+GGG | 0.247435 | 6_4:+6917978 | None:intergenic |
| GAATCACTTTGAATACTTCT+TGG | 0.258920 | 6_4:+6921500 | None:intergenic |
| GGTCATCTTGTTGGATATAT+TGG | 0.291335 | 6_4:-6921332 | Msa0974060:CDS |
| TTACCTTCCCATTGCATCAT+AGG | 0.291421 | 6_4:+6919656 | None:intergenic |
| ATCAAGGATTGATTCAGAAT+TGG | 0.298532 | 6_4:-6921354 | Msa0974060:CDS |
| TGCTTTGGAGCATTATGTTT+TGG | 0.304479 | 6_4:-6920378 | Msa0974060:CDS |
| GCTGATCTATACAACAAAAT+AGG | 0.310358 | 6_4:-6920167 | Msa0974060:CDS |
| GGAGTCATGTATTATATGTT+AGG | 0.311098 | 6_4:-6919915 | Msa0974060:CDS |
| ACGTTGTTGAAGATCGTTTC+CGG | 0.314381 | 6_4:+6917753 | None:intergenic |
| CACATCACCAATTCCAAACT+TGG | 0.316908 | 6_4:+6920930 | None:intergenic |
| TGAGTTTGTTTGTTATGTTT+TGG | 0.321327 | 6_4:+6917960 | None:intergenic |
| TGTTGGATGATTCTCTCCTT+TGG | 0.321402 | 6_4:+6920214 | None:intergenic |
| TGTTGGATATATTGGTGATT+TGG | 0.328352 | 6_4:-6921324 | Msa0974060:CDS |
| AACAAGAGATATGATATCTA+AGG | 0.338308 | 6_4:-6921030 | Msa0974060:CDS |
| TTTGCAGGGTGTATGCAATT+AGG | 0.340480 | 6_4:-6920786 | Msa0974060:CDS |
| TGAAGATGGTAAACCAAGTT+TGG | 0.349399 | 6_4:-6920943 | Msa0974060:CDS |
| CATGCACTAGCTAAGTTTGC+AGG | 0.349500 | 6_4:-6920801 | Msa0974060:CDS |
| AAATTCAAGGGCAGGTCTTA+GGG | 0.362813 | 6_4:-6920701 | Msa0974060:CDS |
| CGGTCGTGAAAGTTTGTTAC+CGG | 0.371565 | 6_4:+6917773 | None:intergenic |
| CTTGTTATCTTTAACAAGAA+AGG | 0.373530 | 6_4:+6921047 | None:intergenic |
| GGAGTTTATAGCAATCTTGC+AGG | 0.377216 | 6_4:-6919681 | Msa0974060:CDS |
| AAAGTAGAAGTTTGCATAAG+AGG | 0.383062 | 6_4:-6921181 | Msa0974060:CDS |
| AATCTCTTCTAGAGAGATTC+CGG | 0.387871 | 6_4:+6920082 | None:intergenic |
| TGCTGGAATTGAAGCACAAA+TGG | 0.389026 | 6_4:-6919937 | Msa0974060:CDS |
| TCAGAATTGGGTCATCTTGT+TGG | 0.395318 | 6_4:-6921341 | Msa0974060:CDS |
| CTTCATTTATAGCATACCTT+TGG | 0.397429 | 6_4:+6919775 | None:intergenic |
| TCAAGGATTGATTCAGAATT+GGG | 0.399811 | 6_4:-6921353 | Msa0974060:CDS |
| CGTTTCTCATCGTCGACATC+AGG | 0.408278 | 6_4:+6919310 | None:intergenic |
| GAATGACTGTGGTGTTGATT+TGG | 0.410714 | 6_4:+6917855 | None:intergenic |
| TGGTAAACCAAGTTTGGAAT+TGG | 0.411399 | 6_4:-6920937 | Msa0974060:CDS |
| AAGATATACAACAATGTTCC+TGG | 0.414393 | 6_4:-6919975 | Msa0974060:CDS |
| ATCCATGAATGATATAGAAA+AGG | 0.416117 | 6_4:-6920024 | Msa0974060:CDS |
| AACAAGAAAGGTCCGAGATC+AGG | 0.418100 | 6_4:+6921059 | None:intergenic |
| CCAAAATTGAGAGCCTTGTT+CGG | 0.420334 | 6_4:+6920999 | None:intergenic |
| CCTAATGTGTCTTGATGATA+AGG | 0.423921 | 6_4:+6919702 | None:intergenic |
| GGTCAACACAGTACTATTGC+TGG | 0.427720 | 6_4:-6919954 | Msa0974060:CDS |
| AAGCAGGAAGAGCAAGGAAC+AGG | 0.427976 | 6_4:-6919264 | Msa0974060:CDS |
| GCATAAGAGGCTTGGTTTGA+AGG | 0.433751 | 6_4:-6921108 | Msa0974060:CDS |
| GGACACAAGCAAGTCCCATT+TGG | 0.439623 | 6_4:+6919796 | None:intergenic |
| TACATATTCCAACATTTCAA+TGG | 0.441735 | 6_4:+6919369 | None:intergenic |
| CCTTATCATCAAGACACATT+AGG | 0.443472 | 6_4:-6919702 | Msa0974060:CDS |
| ATCTCTTCTAGAGAGATTCC+GGG | 0.451271 | 6_4:+6920083 | None:intergenic |
| TCAATCGAACGCTCGAGAAT+CGG | 0.452266 | 6_4:+6920852 | None:intergenic |
| ACTCATATGGCGAAGAATCA+AGG | 0.454260 | 6_4:-6921370 | Msa0974060:CDS |
| GTTCTGATCAATCACCTTCA+AGG | 0.455701 | 6_4:-6921403 | Msa0974060:CDS |
| TCCATGAATGATATAGAAAA+GGG | 0.457605 | 6_4:-6920023 | Msa0974060:CDS |
| AGGTGATACTTATGCAATGA+TGG | 0.459547 | 6_4:-6920766 | Msa0974060:CDS |
| CTTATTGTGAAAACGCCCTT+CGG | 0.460225 | 6_4:-6920124 | Msa0974060:CDS |
| TTTGAATTATGTAATGAAGA+TGG | 0.461930 | 6_4:-6920957 | Msa0974060:CDS |
| GGTGAACGGCGAAGTGAAAC+TGG | 0.462052 | 6_4:+6917924 | None:intergenic |
| AATGAGAAGGGAACTAGAAA+AGG | 0.463055 | 6_4:-6921158 | Msa0974060:CDS |
| TTCTCAATAGCATCAACATT+CGG | 0.463708 | 6_4:+6921260 | None:intergenic |
| AGGTGATTATGAAAGTGCTT+TGG | 0.465683 | 6_4:-6920393 | Msa0974060:CDS |
| GGAATTGCATTGAACCAAAT+GGG | 0.469011 | 6_4:-6919810 | Msa0974060:CDS |
| CTTGATATTCACAAGGGAAA+CGG | 0.471028 | 6_4:-6920579 | Msa0974060:intron |
| TGAAAGCTATACACCTCATA+AGG | 0.473275 | 6_4:-6921567 | Msa0974060:CDS |
| GGTGATGTGTCTTCATGTAT+TGG | 0.479362 | 6_4:-6920916 | Msa0974060:CDS |
| TGGAATTGCATTGAACCAAA+TGG | 0.482345 | 6_4:-6919811 | Msa0974060:CDS |
| TCTCTAGAAGAGATTGCAAA+TGG | 0.485821 | 6_4:-6920074 | Msa0974060:CDS |
| GCCGAGTTGTTAAAAGAAGC+AGG | 0.488102 | 6_4:-6919280 | Msa0974060:CDS |
| AAGGGAACTAGAAAAGGAAA+TGG | 0.489596 | 6_4:-6921152 | Msa0974060:CDS |
| GCAGTAAAGTTATCCTTATG+AGG | 0.489807 | 6_4:+6921554 | None:intergenic |
| AGCTAAGAAGCTGTGTCAAA+TGG | 0.495654 | 6_4:-6920604 | Msa0974060:CDS |
| ATATGATGAGGAAGCATAAG+AGG | 0.497481 | 6_4:-6921121 | Msa0974060:CDS |
| CAACAAAATAGGCAAGTTCA+AGG | 0.497660 | 6_4:-6920156 | Msa0974060:CDS |
| CGGTGAAGAATCGTCAAAGT+TGG | 0.498330 | 6_4:-6921210 | Msa0974060:CDS |
| AGGCGATGCTTATTTGTCGT+TGG | 0.499558 | 6_4:-6920294 | Msa0974060:CDS |
| TGGTGAACGGCGACGGTGAA+CGG | 0.500805 | 6_4:+6917875 | None:intergenic |
| ACAGCAGGACTTGAAATTCA+AGG | 0.502831 | 6_4:-6920714 | Msa0974060:CDS |
| GCTTCGGTTGATTGTAGCAT+AGG | 0.507105 | 6_4:-6920314 | Msa0974060:CDS |
| CTTGGACTTAGTGTACTCCT+TGG | 0.507878 | 6_4:+6921518 | None:intergenic |
| GAAATGTTGGAATATGTAGT+TGG | 0.509887 | 6_4:-6919364 | Msa0974060:CDS |
| ACTTCTCATTTCATAAACAT+TGG | 0.511524 | 6_4:+6921424 | None:intergenic |
| CGGATTTGTTCGAAGAGGCT+AGG | 0.512806 | 6_4:-6919749 | Msa0974060:CDS |
| ATGAGGAAGCATAAGAGGCT+TGG | 0.515392 | 6_4:-6921116 | Msa0974060:CDS |
| GGTTATGGCGGAAAACCGTC+AGG | 0.515507 | 6_4:-6920348 | Msa0974060:CDS |
| GCAGGAACCTATGATGCAAT+GGG | 0.518109 | 6_4:-6919663 | Msa0974060:CDS |
| GGGGAAACTGATCCTCGATT+CGG | 0.522063 | 6_4:-6920681 | Msa0974060:CDS |
| TGCAGGAACCTATGATGCAA+TGG | 0.524517 | 6_4:-6919664 | Msa0974060:CDS |
| AGGACTTGAAATTCAAGGGC+AGG | 0.524841 | 6_4:-6920709 | Msa0974060:CDS |
| TTGGGTTTCTTCAGTTATTG+GGG | 0.530145 | 6_4:+6917979 | None:intergenic |
| GGATGATGCCATTGAAATGT+TGG | 0.531705 | 6_4:-6919377 | Msa0974060:CDS |
| TCAGGAACTAGACGTTGCTT+CGG | 0.541301 | 6_4:-6920330 | Msa0974060:CDS |
| GCTGGAATTGAAGCACAAAT+GGG | 0.544451 | 6_4:-6919936 | Msa0974060:CDS |
| CTCGATTCGGTGAGACATGT+CGG | 0.555108 | 6_4:-6920668 | Msa0974060:CDS |
| TGTCACAACAGAAAATAAAG+AGG | 0.555241 | 6_4:-6921285 | Msa0974060:CDS |
| GAGTCATGTATTATATGTTA+GGG | 0.556961 | 6_4:-6919914 | Msa0974060:CDS |
| TGAACGACGGTGGTAGGAGT+TGG | 0.559836 | 6_4:+6917903 | None:intergenic |
| GCGAAGTGAACGACGGTGGT+AGG | 0.562925 | 6_4:+6917897 | None:intergenic |
| CAGCAGGACTTGAAATTCAA+GGG | 0.565491 | 6_4:-6920713 | Msa0974060:CDS |
| TCAATTGATTTAGCCATCGA+CGG | 0.567860 | 6_4:-6921479 | Msa0974060:CDS |
| AAGAGGCTTGGTTTGAAGGA+CGG | 0.569541 | 6_4:-6921104 | Msa0974060:CDS |
| TTCTGATCAATCACCTTCAA+GGG | 0.570336 | 6_4:-6921402 | Msa0974060:CDS |
| TTTGCATAAGAGGAATGAGA+AGG | 0.571407 | 6_4:-6921171 | Msa0974060:CDS |
| GTTTCTTCAAGCACAAGGAT+CGG | 0.574004 | 6_4:-6921230 | Msa0974060:CDS |
| GGTGATACTTATGCAATGAT+GGG | 0.574573 | 6_4:-6920765 | Msa0974060:CDS |
| CGGTAACAAACTTTCACGAC+CGG | 0.579374 | 6_4:-6917772 | Msa0974060:CDS |
| TCCTAAATTACAGTAAATTG+TGG | 0.579760 | 6_4:+6920893 | None:intergenic |
| GAGTTAGATAATCCTGATCT+CGG | 0.583047 | 6_4:-6921071 | Msa0974060:CDS |
| TGTGGTGTTGATTTGGTGAA+CGG | 0.592127 | 6_4:+6917862 | None:intergenic |
| ACAAGAGATATGATATCTAA+GGG | 0.596104 | 6_4:-6921029 | Msa0974060:CDS |
| GTTGATTTGGTGAACGGCGA+CGG | 0.597906 | 6_4:+6917868 | None:intergenic |
| TGGGACTTGCTTGTGTCCAA+AGG | 0.597967 | 6_4:-6919791 | Msa0974060:CDS |
| CGAACGCTCGAGAATCGGTA+TGG | 0.598027 | 6_4:+6920857 | None:intergenic |
| TAAAAGAAGCAGGAAGAGCA+AGG | 0.602086 | 6_4:-6919270 | Msa0974060:CDS |
| GCAATAGTACTGTGTTGACC+AGG | 0.603485 | 6_4:+6919957 | None:intergenic |
| CGGTGGTAGGAGTTGGTGAA+CGG | 0.610444 | 6_4:+6917910 | None:intergenic |
| GTCGCAAAATTTCGTGCTAG+CGG | 0.610520 | 6_4:-6919855 | Msa0974060:CDS |
| TGAGTATGCTGAGTGTAAAA+CGG | 0.612753 | 6_4:+6917655 | None:intergenic |
| AGTATCTACAACACCGTCGA+TGG | 0.614317 | 6_4:+6921466 | None:intergenic |
| AATTCAAGGGCAGGTCTTAG+GGG | 0.616046 | 6_4:-6920700 | Msa0974060:CDS |
| TTTGGCAAGCGTGGTTATGG+CGG | 0.616408 | 6_4:-6920360 | Msa0974060:CDS |
| GGAATGAGAGAAGAGAAGCT+AGG | 0.616908 | 6_4:-6919343 | Msa0974060:CDS |
| ATGCACTAGCTAAGTTTGCA+GGG | 0.620124 | 6_4:-6920800 | Msa0974060:CDS |
| TCTTGACCATGCTCTAACAC+AGG | 0.621585 | 6_4:+6920825 | None:intergenic |
| GTATGCTATAAATGAAGCTG+CGG | 0.621746 | 6_4:-6919769 | Msa0974060:CDS |
| TTGCATAAGAGGAATGAGAA+GGG | 0.622583 | 6_4:-6921170 | Msa0974060:CDS |
| TCTCAAATTATAAAAGACAA+TGG | 0.623016 | 6_4:-6919202 | Msa0974060:CDS |
| GATGTTCCTGTGTTAGAGCA+TGG | 0.625382 | 6_4:-6920831 | Msa0974060:CDS |
| TTATTGTTTCTTCAAGCACA+AGG | 0.635722 | 6_4:-6921235 | Msa0974060:CDS |
| CGACGATGAGAAACGTAGGT+TGG | 0.637957 | 6_4:-6919302 | Msa0974060:CDS |
| CGACATGTCTCACCGAATCG+AGG | 0.638572 | 6_4:+6920669 | None:intergenic |
| AATGGCTCTTGATATTCACA+AGG | 0.649667 | 6_4:-6920586 | Msa0974060:CDS |
| TTTCTTCCCGAAAATCCGAA+GGG | 0.655728 | 6_4:+6920109 | None:intergenic |
| AGCTGCGGATTTGTTCGAAG+AGG | 0.656437 | 6_4:-6919754 | Msa0974060:CDS |
| GAACCTATGATGCAATGGGA+AGG | 0.656596 | 6_4:-6919659 | Msa0974060:intron |
| TAAGGGTGAGAATCCGAACA+AGG | 0.657093 | 6_4:-6921012 | Msa0974060:CDS |
| AAGCAACGTCTAGTTCCTGA+CGG | 0.661536 | 6_4:+6920333 | None:intergenic |
| CAGTGCTTGAACATGTGCCT+CGG | 0.663577 | 6_4:+6920638 | None:intergenic |
| GACATGTCGGTATGTAGCCG+AGG | 0.664489 | 6_4:-6920655 | Msa0974060:CDS |
| TGTCACGCAAGCATTATCGC+CGG | 0.669569 | 6_4:-6917792 | Msa0974060:CDS |
| ATGGCTCTTGATATTCACAA+GGG | 0.677786 | 6_4:-6920585 | Msa0974060:CDS |
| ATGAATGCGGTGGTGAACGA+CGG | 0.704041 | 6_4:+6917695 | None:intergenic |
| CTGCTCAACAAGCATCACCA+AGG | 0.705437 | 6_4:-6921535 | Msa0974060:CDS |
| ATGATGATAATGAATGACTG+TGG | 0.712742 | 6_4:+6917844 | None:intergenic |
| ATGTCGACGATGAGAAACGT+AGG | 0.718474 | 6_4:-6919306 | Msa0974060:CDS |
| AACGGCGAAGTGAACGACGG+TGG | 0.726049 | 6_4:+6917893 | None:intergenic |
| GTGAACGGCGAAGTGAACGA+CGG | 0.730027 | 6_4:+6917890 | None:intergenic |
| GATGAAGTTGATGAATGCGG+TGG | 0.733790 | 6_4:+6917685 | None:intergenic |
| GATGATGAAGTTGATGAATG+CGG | 0.776031 | 6_4:+6917682 | None:intergenic |
| GGTGTTGTTGAGTTGAACGA+CGG | 0.781214 | 6_4:+6917716 | None:intergenic |
| TAATTTAGGACAGTACAGTG+AGG | 0.792554 | 6_4:-6920880 | Msa0974060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATATAAAACAATGCAT+TGG | + | chr6_4:6919735-6919754 | None:intergenic | 15.0% |
| !! | TGTATAATTGAATGTATAAA+TGG | - | chr6_4:6920207-6920226 | Msa0974060:CDS | 15.0% |
| !! | TAATATCGAAATTAACTATA+AGG | - | chr6_4:6920677-6920696 | Msa0974060:CDS | 15.0% |
| !! | GGAATATATAAAAGAAATTA+TGG | - | chr6_4:6920698-6920717 | Msa0974060:CDS | 15.0% |
| !! | TTTGAATTATGTAATGAAGA+TGG | - | chr6_4:6918300-6918319 | Msa0974060:intron | 20.0% |
| !! | TAAAATGTAAGGAGATTTAA+GGG | + | chr6_4:6919639-6919658 | None:intergenic | 20.0% |
| !! | ATAAAATGTAAGGAGATTTA+AGG | + | chr6_4:6919640-6919659 | None:intergenic | 20.0% |
| !!! | TTGTAATATGTTATTTGACA+TGG | + | chr6_4:6919759-6919778 | None:intergenic | 20.0% |
| !!! | AATTATAATGATTTTCAGAG+TGG | - | chr6_4:6919859-6919878 | Msa0974060:CDS | 20.0% |
| !! | TCTCAAATTATAAAAGACAA+TGG | - | chr6_4:6920055-6920074 | Msa0974060:CDS | 20.0% |
| !!! | TCAATATTTTTCCTTGTTTA+AGG | - | chr6_4:6920146-6920165 | Msa0974060:CDS | 20.0% |
| !! | TGGATTAAAATTCATTATGT+GGG | + | chr6_4:6920626-6920645 | None:intergenic | 20.0% |
| !!! | ATGGATTAAAATTCATTATG+TGG | + | chr6_4:6920627-6920646 | None:intergenic | 20.0% |
| !! | TAAAAGATCGGAAAAAAATT+TGG | + | chr6_4:6920734-6920753 | None:intergenic | 20.0% |
| !!! | GTGTAAAAAGCAATTTTTTT+GGG | + | chr6_4:6921231-6921250 | None:intergenic | 20.0% |
| ! | ACTTCTCATTTCATAAACAT+TGG | + | chr6_4:6917836-6917855 | None:intergenic | 25.0% |
| !! | ATGGTTTTTACAATATGATG+AGG | - | chr6_4:6918124-6918143 | Msa0974060:intron | 25.0% |
| !! | CTTGTTATCTTTAACAAGAA+AGG | + | chr6_4:6918213-6918232 | None:intergenic | 25.0% |
| ! | AACAAGAGATATGATATCTA+AGG | - | chr6_4:6918227-6918246 | Msa0974060:intron | 25.0% |
| ! | ACAAGAGATATGATATCTAA+GGG | - | chr6_4:6918228-6918247 | Msa0974060:intron | 25.0% |
| ! | TCCTAAATTACAGTAAATTG+TGG | + | chr6_4:6918367-6918386 | None:intergenic | 25.0% |
| ! | NNNNNNNNNNCGGAGATTGA+TGG | - | chr6_4:6918822-6918841 | Msa0974060:intron | 25.0% |
| ! | NNNNNNNNNCGGAGATTGAT+GGG | - | chr6_4:6918823-6918842 | Msa0974060:intron | 25.0% |
| ! | ATCCATGAATGATATAGAAA+AGG | - | chr6_4:6919233-6919252 | Msa0974060:CDS | 25.0% |
| ! | TCCATGAATGATATAGAAAA+GGG | - | chr6_4:6919234-6919253 | Msa0974060:CDS | 25.0% |
| ! | GAGTCATGTATTATATGTTA+GGG | - | chr6_4:6919343-6919362 | Msa0974060:CDS | 25.0% |
| !!! | ACTATTTTGGAAAAAGAGTA+TGG | - | chr6_4:6919531-6919550 | Msa0974060:intron | 25.0% |
| ! | GATCAGAACAATAAAATGTA+AGG | + | chr6_4:6919650-6919669 | None:intergenic | 25.0% |
| ! | TACATATTCCAACATTTCAA+TGG | + | chr6_4:6919891-6919910 | None:intergenic | 25.0% |
| !! | GTCTTTTATAATTTGAGAGT+TGG | + | chr6_4:6920053-6920072 | None:intergenic | 25.0% |
| ! | ATTAAAGTTCTATGAATCTG+AGG | - | chr6_4:6920079-6920098 | Msa0974060:CDS | 25.0% |
| ! | ACAAGGAAAAATATTGAAAG+TGG | + | chr6_4:6920143-6920162 | None:intergenic | 25.0% |
| ! | GATTTAGATGATTAGAATAG+AGG | - | chr6_4:6920498-6920517 | Msa0974060:intron | 25.0% |
| !! | GGCAAATTTTACTTATCTAT+TGG | + | chr6_4:6920804-6920823 | None:intergenic | 25.0% |
| ! | AGATAAGTAAAATTTGCCTA+AGG | - | chr6_4:6920806-6920825 | Msa0974060:CDS | 25.0% |
| !! | ATTTGCCTAAGGATTATTTT+AGG | - | chr6_4:6920817-6920836 | Msa0974060:CDS | 25.0% |
| !!! | GGTGTAAAAAGCAATTTTTT+TGG | + | chr6_4:6921232-6921251 | None:intergenic | 25.0% |
| !!! | AGCAATTTTTGTTTTTTCTG+AGG | + | chr6_4:6921253-6921272 | None:intergenic | 25.0% |
| !!! | GAGTTTGTTTGTTATGTTTT+GGG | + | chr6_4:6921299-6921318 | None:intergenic | 25.0% |
| !!! | TGAGTTTGTTTGTTATGTTT+TGG | + | chr6_4:6921300-6921319 | None:intergenic | 25.0% |
| GAATCACTTTGAATACTTCT+TGG | + | chr6_4:6917760-6917779 | None:intergenic | 30.0% | |
| ! | ATCAAGGATTGATTCAGAAT+TGG | - | chr6_4:6917903-6917922 | Msa0974060:CDS | 30.0% |
| ! | TCAAGGATTGATTCAGAATT+GGG | - | chr6_4:6917904-6917923 | Msa0974060:CDS | 30.0% |
| ! | TGTTGGATATATTGGTGATT+TGG | - | chr6_4:6917933-6917952 | Msa0974060:CDS | 30.0% |
| TGTCACAACAGAAAATAAAG+AGG | - | chr6_4:6917972-6917991 | Msa0974060:CDS | 30.0% | |
| TTCTCAATAGCATCAACATT+CGG | + | chr6_4:6918000-6918019 | None:intergenic | 30.0% | |
| ! | TTATTGTTTCTTCAAGCACA+AGG | - | chr6_4:6918022-6918041 | Msa0974060:intron | 30.0% |
| AAAGTAGAAGTTTGCATAAG+AGG | - | chr6_4:6918076-6918095 | Msa0974060:intron | 30.0% | |
| GCCACAATTTACTGTAATTT+AGG | - | chr6_4:6918363-6918382 | Msa0974060:intron | 30.0% | |
| ! | ACTGTTTTCAAATCAACCAA+AGG | - | chr6_4:6919027-6919046 | Msa0974060:intron | 30.0% |
| GCTGATCTATACAACAAAAT+AGG | - | chr6_4:6919090-6919109 | Msa0974060:intron | 30.0% | |
| ! | ACCCTTTTCTATATCATTCA+TGG | + | chr6_4:6919238-6919257 | None:intergenic | 30.0% |
| AAGATATACAACAATGTTCC+TGG | - | chr6_4:6919282-6919301 | Msa0974060:CDS | 30.0% | |
| GGAGTCATGTATTATATGTT+AGG | - | chr6_4:6919342-6919361 | Msa0974060:CDS | 30.0% | |
| CTTCATTTATAGCATACCTT+TGG | + | chr6_4:6919485-6919504 | None:intergenic | 30.0% | |
| ATGTGCAGTTTGGATTATAT+CGG | - | chr6_4:6919694-6919713 | Msa0974060:CDS | 30.0% | |
| ! | AACAATGCATTGGTAAAACA+CGG | + | chr6_4:6919725-6919744 | None:intergenic | 30.0% |
| ! | GTCGAGTACTAGAATTTTTA+AGG | - | chr6_4:6919812-6919831 | Msa0974060:CDS | 30.0% |
| GAAATGTTGGAATATGTAGT+TGG | - | chr6_4:6919893-6919912 | Msa0974060:CDS | 30.0% | |
| CAGGAAATCAAAAAGATCAT+TGG | - | chr6_4:6920012-6920031 | Msa0974060:CDS | 30.0% | |
| TATGTGAACATCCTTAAACA+AGG | + | chr6_4:6920160-6920179 | None:intergenic | 30.0% | |
| TGAAACTTCACTTTCTATGA+TGG | - | chr6_4:6920270-6920289 | Msa0974060:CDS | 30.0% | |
| CATCCTTGACTATAACAAAT+GGG | + | chr6_4:6920327-6920346 | None:intergenic | 30.0% | |
| ACATCCTTGACTATAACAAA+TGG | + | chr6_4:6920328-6920347 | None:intergenic | 30.0% | |
| TCAACATCTTCACTAATCTT+TGG | - | chr6_4:6920476-6920495 | Msa0974060:intron | 30.0% | |
| ATTCAAGCACATTGTTCTAT+TGG | - | chr6_4:6920565-6920584 | Msa0974060:intron | 30.0% | |
| ! | TTCTATTGGTTGAAAGTAGA+CGG | - | chr6_4:6920579-6920598 | Msa0974060:intron | 30.0% |
| !! | TTTTCCGATCTTTTAACTGT+TGG | - | chr6_4:6920739-6920758 | Msa0974060:CDS | 30.0% |
| !! | TTTCCGATCTTTTAACTGTT+GGG | - | chr6_4:6920740-6920759 | Msa0974060:CDS | 30.0% |
| TTGTGCCTAAAATAATCCTT+AGG | + | chr6_4:6920825-6920844 | None:intergenic | 30.0% | |
| ! | TTTTAGGCACAATTCGAATT+TGG | - | chr6_4:6920833-6920852 | Msa0974060:CDS | 30.0% |
| TTTAGGCACAATTCGAATTT+GGG | - | chr6_4:6920834-6920853 | Msa0974060:CDS | 30.0% | |
| ACTCGAATTATTATTGTCCT+CGG | - | chr6_4:6920900-6920919 | Msa0974060:CDS | 30.0% | |
| ! | TAGAGAAAACGACATTGATT+GGG | + | chr6_4:6920940-6920959 | None:intergenic | 30.0% |
| ATAGAGAAAACGACATTGAT+TGG | + | chr6_4:6920941-6920960 | None:intergenic | 30.0% | |
| TTTAAACATTTGTCCACCAT+AGG | - | chr6_4:6921127-6921146 | Msa0974060:CDS | 30.0% | |
| !!! | TTTTTGGGCTTGTTGTTAAT+GGG | + | chr6_4:6921216-6921235 | None:intergenic | 30.0% |
| !!! | TTTTTTGGGCTTGTTGTTAA+TGG | + | chr6_4:6921217-6921236 | None:intergenic | 30.0% |
| ! | TTTGGGTTTCTTCAGTTATT+GGG | + | chr6_4:6921282-6921301 | None:intergenic | 30.0% |
| !!! | TTTTGGGTTTCTTCAGTTAT+TGG | + | chr6_4:6921283-6921302 | None:intergenic | 30.0% |
| ! | ATGATGATAATGAATGACTG+TGG | + | chr6_4:6921416-6921435 | None:intergenic | 30.0% |
| TGAAAGCTATACACCTCATA+AGG | - | chr6_4:6917690-6917709 | Msa0974060:CDS | 35.0% | |
| GCAGTAAAGTTATCCTTATG+AGG | + | chr6_4:6917706-6917725 | None:intergenic | 35.0% | |
| ! | TCAATTGATTTAGCCATCGA+CGG | - | chr6_4:6917778-6917797 | Msa0974060:CDS | 35.0% |
| TTCTGATCAATCACCTTCAA+GGG | - | chr6_4:6917855-6917874 | Msa0974060:CDS | 35.0% | |
| !!! | AGGGCTAGTTTTTACTCATA+TGG | - | chr6_4:6917874-6917893 | Msa0974060:CDS | 35.0% |
| GGTCATCTTGTTGGATATAT+TGG | - | chr6_4:6917925-6917944 | Msa0974060:CDS | 35.0% | |
| TTTGCATAAGAGGAATGAGA+AGG | - | chr6_4:6918086-6918105 | Msa0974060:intron | 35.0% | |
| TTGCATAAGAGGAATGAGAA+GGG | - | chr6_4:6918087-6918106 | Msa0974060:intron | 35.0% | |
| AATGAGAAGGGAACTAGAAA+AGG | - | chr6_4:6918099-6918118 | Msa0974060:intron | 35.0% | |
| AAGGGAACTAGAAAAGGAAA+TGG | - | chr6_4:6918105-6918124 | Msa0974060:intron | 35.0% | |
| ! | ATATGATGAGGAAGCATAAG+AGG | - | chr6_4:6918136-6918155 | Msa0974060:intron | 35.0% |
| GAGTTAGATAATCCTGATCT+CGG | - | chr6_4:6918186-6918205 | Msa0974060:intron | 35.0% | |
| TGAAGATGGTAAACCAAGTT+TGG | - | chr6_4:6918314-6918333 | Msa0974060:intron | 35.0% | |
| ! | TGGTAAACCAAGTTTGGAAT+TGG | - | chr6_4:6918320-6918339 | Msa0974060:intron | 35.0% |
| ! | TAATTTAGGACAGTACAGTG+AGG | - | chr6_4:6918377-6918396 | Msa0974060:intron | 35.0% |
| AGGTGATACTTATGCAATGA+TGG | - | chr6_4:6918491-6918510 | Msa0974060:intron | 35.0% | |
| GGTGATACTTATGCAATGAT+GGG | - | chr6_4:6918492-6918511 | Msa0974060:intron | 35.0% | |
| ! | TCTCTACTGTTTTATACAGC+AGG | - | chr6_4:6918528-6918547 | Msa0974060:intron | 35.0% |
| AATGGCTCTTGATATTCACA+AGG | - | chr6_4:6918671-6918690 | Msa0974060:intron | 35.0% | |
| ATGGCTCTTGATATTCACAA+GGG | - | chr6_4:6918672-6918691 | Msa0974060:intron | 35.0% | |
| CTTGATATTCACAAGGGAAA+CGG | - | chr6_4:6918678-6918697 | Msa0974060:intron | 35.0% | |
| !! | AGGTGATTATGAAAGTGCTT+TGG | - | chr6_4:6918864-6918883 | Msa0974060:intron | 35.0% |
| !!! | TGCTTTGGAGCATTATGTTT+TGG | - | chr6_4:6918879-6918898 | Msa0974060:intron | 35.0% |
| ACAAAAACAGAAGCAACTGT+TGG | + | chr6_4:6919063-6919082 | None:intergenic | 35.0% | |
| CAACAAAATAGGCAAGTTCA+AGG | - | chr6_4:6919101-6919120 | Msa0974060:intron | 35.0% | |
| !! | ATTTTCGGGAAGAAAAAACC+CGG | - | chr6_4:6919156-6919175 | Msa0974060:intron | 35.0% |
| ! | AATCTCTTCTAGAGAGATTC+CGG | + | chr6_4:6919178-6919197 | None:intergenic | 35.0% |
| ! | TCTCTAGAAGAGATTGCAAA+TGG | - | chr6_4:6919183-6919202 | Msa0974060:intron | 35.0% |
| !! | GAGAAAAAATCGGCTTTGTT+TGG | - | chr6_4:6919426-6919445 | Msa0974060:intron | 35.0% |
| TGGAATTGCATTGAACCAAA+TGG | - | chr6_4:6919446-6919465 | Msa0974060:intron | 35.0% | |
| GGAATTGCATTGAACCAAAT+GGG | - | chr6_4:6919447-6919466 | Msa0974060:intron | 35.0% | |
| GTATGCTATAAATGAAGCTG+CGG | - | chr6_4:6919488-6919507 | Msa0974060:intron | 35.0% | |
| ! | CCTAATGTGTCTTGATGATA+AGG | + | chr6_4:6919558-6919577 | None:intergenic | 35.0% |
| CCTTATCATCAAGACACATT+AGG | - | chr6_4:6919555-6919574 | Msa0974060:intron | 35.0% | |
| ! | TCCTGCTTCTTTTAACAACT+CGG | + | chr6_4:6919981-6920000 | None:intergenic | 35.0% |
| ! | GGTGTATCTCAAATGTGTTT+TGG | + | chr6_4:6920306-6920325 | None:intergenic | 35.0% |
| !! | ACACCCATTTGTTATAGTCA+AGG | - | chr6_4:6920321-6920340 | Msa0974060:CDS | 35.0% |
| ! | TCTATTGGTTGAAAGTAGAC+GGG | - | chr6_4:6920580-6920599 | Msa0974060:CDS | 35.0% |
| !! | TAAGAGCACACTCTCTTTTA+TGG | + | chr6_4:6920646-6920665 | None:intergenic | 35.0% |
| GAACCCAACAGTTAAAAGAT+CGG | + | chr6_4:6920746-6920765 | None:intergenic | 35.0% | |
| CTTATCTATTGGAAGAACTC+TGG | + | chr6_4:6920793-6920812 | None:intergenic | 35.0% | |
| GAGGACAATAATAATTCGAG+TGG | + | chr6_4:6920901-6920920 | None:intergenic | 35.0% | |
| CTCGAATTATTATTGTCCTC+GGG | - | chr6_4:6920901-6920920 | Msa0974060:CDS | 35.0% | |
| TTGGGTTTCTTCAGTTATTG+GGG | + | chr6_4:6921281-6921300 | None:intergenic | 35.0% | |
| !! | GATGATGAAGTTGATGAATG+CGG | + | chr6_4:6921578-6921597 | None:intergenic | 35.0% |
| TGAGTATGCTGAGTGTAAAA+CGG | + | chr6_4:6921605-6921624 | None:intergenic | 35.0% | |
| GTTCTGATCAATCACCTTCA+AGG | - | chr6_4:6917854-6917873 | Msa0974060:CDS | 40.0% | |
| GAGTAAAAACTAGCCCTTGA+AGG | + | chr6_4:6917871-6917890 | None:intergenic | 40.0% | |
| ACTCATATGGCGAAGAATCA+AGG | - | chr6_4:6917887-6917906 | Msa0974060:CDS | 40.0% | |
| TCAGAATTGGGTCATCTTGT+TGG | - | chr6_4:6917916-6917935 | Msa0974060:CDS | 40.0% | |
| GTTTCTTCAAGCACAAGGAT+CGG | - | chr6_4:6918027-6918046 | Msa0974060:intron | 40.0% | |
| !! | CCAAAATTGAGAGCCTTGTT+CGG | + | chr6_4:6918261-6918280 | None:intergenic | 40.0% |
| CACATCACCAATTCCAAACT+TGG | + | chr6_4:6918330-6918349 | None:intergenic | 40.0% | |
| GGTGATGTGTCTTCATGTAT+TGG | - | chr6_4:6918341-6918360 | Msa0974060:intron | 40.0% | |
| ATGCACTAGCTAAGTTTGCA+GGG | - | chr6_4:6918457-6918476 | Msa0974060:intron | 40.0% | |
| TTTGCAGGGTGTATGCAATT+AGG | - | chr6_4:6918471-6918490 | Msa0974060:intron | 40.0% | |
| ACAGCAGGACTTGAAATTCA+AGG | - | chr6_4:6918543-6918562 | Msa0974060:intron | 40.0% | |
| CAGCAGGACTTGAAATTCAA+GGG | - | chr6_4:6918544-6918563 | Msa0974060:intron | 40.0% | |
| AAATTCAAGGGCAGGTCTTA+GGG | - | chr6_4:6918556-6918575 | Msa0974060:intron | 40.0% | |
| AGCTAAGAAGCTGTGTCAAA+TGG | - | chr6_4:6918653-6918672 | Msa0974060:intron | 40.0% | |
| GGACTAATCTGTGACTCAAA+AGG | - | chr6_4:6918844-6918863 | Msa0974060:intron | 40.0% | |
| TGTTGGATGATTCTCTCCTT+TGG | + | chr6_4:6919046-6919065 | None:intergenic | 40.0% | |
| CTTATTGTGAAAACGCCCTT+CGG | - | chr6_4:6919133-6919152 | Msa0974060:intron | 40.0% | |
| TTTCTTCCCGAAAATCCGAA+GGG | + | chr6_4:6919151-6919170 | None:intergenic | 40.0% | |
| ! | TTTTCTTCCCGAAAATCCGA+AGG | + | chr6_4:6919152-6919171 | None:intergenic | 40.0% |
| ! | ATCTCTTCTAGAGAGATTCC+GGG | + | chr6_4:6919177-6919196 | None:intergenic | 40.0% |
| TGCTGGAATTGAAGCACAAA+TGG | - | chr6_4:6919320-6919339 | Msa0974060:CDS | 40.0% | |
| GCTGGAATTGAAGCACAAAT+GGG | - | chr6_4:6919321-6919340 | Msa0974060:CDS | 40.0% | |
| GGAGTTTATAGCAATCTTGC+AGG | - | chr6_4:6919576-6919595 | Msa0974060:intron | 40.0% | |
| TTACCTTCCCATTGCATCAT+AGG | + | chr6_4:6919604-6919623 | None:intergenic | 40.0% | |
| ATCTCGACATAGTACTCTCT+CGG | - | chr6_4:6919667-6919686 | Msa0974060:CDS | 40.0% | |
| GGATGATGCCATTGAAATGT+TGG | - | chr6_4:6919880-6919899 | Msa0974060:CDS | 40.0% | |
| TAAAAGAAGCAGGAAGAGCA+AGG | - | chr6_4:6919987-6920006 | Msa0974060:CDS | 40.0% | |
| TACTAGGATCTCATTCCTCT+GGG | + | chr6_4:6920768-6920787 | None:intergenic | 40.0% | |
| TTACTAGGATCTCATTCCTC+TGG | + | chr6_4:6920769-6920788 | None:intergenic | 40.0% | |
| TGGAAGAACTCTGGATTACT+AGG | + | chr6_4:6920784-6920803 | None:intergenic | 40.0% | |
| ! | AATTCGAATTTGGGTTCTCC+CGG | - | chr6_4:6920843-6920862 | Msa0974060:CDS | 40.0% |
| CAGTTAAAGATGAATCGTCC+GGG | + | chr6_4:6920864-6920883 | None:intergenic | 40.0% | |
| CCAGTTAAAGATGAATCGTC+CGG | + | chr6_4:6920865-6920884 | None:intergenic | 40.0% | |
| ! | TCTTTTCGTCGAAGCAACAT+AGG | - | chr6_4:6921014-6921033 | Msa0974060:CDS | 40.0% |
| !!! | ATGTTTTAGTCGTAAGAGCG+TGG | - | chr6_4:6921045-6921064 | Msa0974060:CDS | 40.0% |
| !!! | TGTTTTAGTCGTAAGAGCGT+GGG | - | chr6_4:6921046-6921065 | Msa0974060:CDS | 40.0% |
| !! | TGTGGTGTTGATTTGGTGAA+CGG | + | chr6_4:6921398-6921417 | None:intergenic | 40.0% |
| !! | GAATGACTGTGGTGTTGATT+TGG | + | chr6_4:6921405-6921424 | None:intergenic | 40.0% |
| ACGTTGTTGAAGATCGTTTC+CGG | + | chr6_4:6921507-6921526 | None:intergenic | 40.0% | |
| CTTGGACTTAGTGTACTCCT+TGG | + | chr6_4:6917742-6917761 | None:intergenic | 45.0% | |
| AGTATCTACAACACCGTCGA+TGG | + | chr6_4:6917794-6917813 | None:intergenic | 45.0% | |
| CGGTGAAGAATCGTCAAAGT+TGG | - | chr6_4:6918047-6918066 | Msa0974060:intron | 45.0% | |
| ! | ATGAGGAAGCATAAGAGGCT+TGG | - | chr6_4:6918141-6918160 | Msa0974060:intron | 45.0% |
| ! | GCATAAGAGGCTTGGTTTGA+AGG | - | chr6_4:6918149-6918168 | Msa0974060:intron | 45.0% |
| ! | AAGAGGCTTGGTTTGAAGGA+CGG | - | chr6_4:6918153-6918172 | Msa0974060:intron | 45.0% |
| AACAAGAAAGGTCCGAGATC+AGG | + | chr6_4:6918201-6918220 | None:intergenic | 45.0% | |
| TAAGGGTGAGAATCCGAACA+AGG | - | chr6_4:6918245-6918264 | Msa0974060:intron | 45.0% | |
| ! | CCGAACAAGGCTCTCAATTT+TGG | - | chr6_4:6918258-6918277 | Msa0974060:intron | 45.0% |
| TCAATCGAACGCTCGAGAAT+CGG | + | chr6_4:6918408-6918427 | None:intergenic | 45.0% | |
| GATGTTCCTGTGTTAGAGCA+TGG | - | chr6_4:6918426-6918445 | Msa0974060:intron | 45.0% | |
| TCTTGACCATGCTCTAACAC+AGG | + | chr6_4:6918435-6918454 | None:intergenic | 45.0% | |
| CATGCACTAGCTAAGTTTGC+AGG | - | chr6_4:6918456-6918475 | Msa0974060:intron | 45.0% | |
| AGGACTTGAAATTCAAGGGC+AGG | - | chr6_4:6918548-6918567 | Msa0974060:intron | 45.0% | |
| GAAATTCAAGGGCAGGTCTT+AGG | - | chr6_4:6918555-6918574 | Msa0974060:intron | 45.0% | |
| AATTCAAGGGCAGGTCTTAG+GGG | - | chr6_4:6918557-6918576 | Msa0974060:intron | 45.0% | |
| !!! | GCATTATGTTTTGGCAAGCG+TGG | - | chr6_4:6918888-6918907 | Msa0974060:intron | 45.0% |
| !!! | TGTTTTGGCAAGCGTGGTTA+TGG | - | chr6_4:6918894-6918913 | Msa0974060:intron | 45.0% |
| ! | AAGCAACGTCTAGTTCCTGA+CGG | + | chr6_4:6918927-6918946 | None:intergenic | 45.0% |
| TCAGGAACTAGACGTTGCTT+CGG | - | chr6_4:6918927-6918946 | Msa0974060:intron | 45.0% | |
| GCTTCGGTTGATTGTAGCAT+AGG | - | chr6_4:6918943-6918962 | Msa0974060:intron | 45.0% | |
| AGGCGATGCTTATTTGTCGT+TGG | - | chr6_4:6918963-6918982 | Msa0974060:intron | 45.0% | |
| ! | GAAAACGCCCTTCGGATTTT+CGG | - | chr6_4:6919141-6919160 | Msa0974060:intron | 45.0% |
| ! | AAAACGCCCTTCGGATTTTC+GGG | - | chr6_4:6919142-6919161 | Msa0974060:intron | 45.0% |
| ! | GCAATAGTACTGTGTTGACC+AGG | + | chr6_4:6919303-6919322 | None:intergenic | 45.0% |
| GGTCAACACAGTACTATTGC+TGG | - | chr6_4:6919303-6919322 | Msa0974060:CDS | 45.0% | |
| GTCGCAAAATTTCGTGCTAG+CGG | - | chr6_4:6919402-6919421 | Msa0974060:intron | 45.0% | |
| TGCTAGCGGCGAGAAAAAAT+CGG | - | chr6_4:6919416-6919435 | Msa0974060:intron | 45.0% | |
| ! | CGAAGAGGCTAGGACTATTT+TGG | - | chr6_4:6919518-6919537 | Msa0974060:intron | 45.0% |
| TGCAGGAACCTATGATGCAA+TGG | - | chr6_4:6919593-6919612 | Msa0974060:intron | 45.0% | |
| GCAGGAACCTATGATGCAAT+GGG | - | chr6_4:6919594-6919613 | Msa0974060:intron | 45.0% | |
| GAACCTATGATGCAATGGGA+AGG | - | chr6_4:6919598-6919617 | Msa0974060:intron | 45.0% | |
| GGAATGAGAGAAGAGAAGCT+AGG | - | chr6_4:6919914-6919933 | Msa0974060:CDS | 45.0% | |
| ATGTCGACGATGAGAAACGT+AGG | - | chr6_4:6919951-6919970 | Msa0974060:CDS | 45.0% | |
| GCCGAGTTGTTAAAAGAAGC+AGG | - | chr6_4:6919977-6919996 | Msa0974060:CDS | 45.0% | |
| TATGTGGGCCCATGTGAATT+TGG | + | chr6_4:6920611-6920630 | None:intergenic | 45.0% | |
| TTTAACTGTTGGGTTCCCAG+AGG | - | chr6_4:6920750-6920769 | Msa0974060:CDS | 45.0% | |
| CCGGACGATTCATCTTTAAC+TGG | - | chr6_4:6920862-6920881 | Msa0974060:CDS | 45.0% | |
| !! | GTTTTAGTCGTAAGAGCGTG+GGG | - | chr6_4:6921047-6921066 | Msa0974060:CDS | 45.0% |
| !! | TTTTAGTCGTAAGAGCGTGG+GGG | - | chr6_4:6921048-6921067 | Msa0974060:CDS | 45.0% |
| TTTGAACTTCTACTCGGAGG+TGG | - | chr6_4:6921073-6921092 | Msa0974060:CDS | 45.0% | |
| AGACTTATGCAGGGTGCATA+AGG | + | chr6_4:6921191-6921210 | None:intergenic | 45.0% | |
| TTATGCACCCTGCATAAGTC+TGG | - | chr6_4:6921190-6921209 | Msa0974060:CDS | 45.0% | |
| ! | TAATGGGCCAGACTTATGCA+GGG | + | chr6_4:6921200-6921219 | None:intergenic | 45.0% |
| ! | TTAATGGGCCAGACTTATGC+AGG | + | chr6_4:6921201-6921220 | None:intergenic | 45.0% |
| GATGCTTGCGTGAAAAACGA+TGG | + | chr6_4:6921444-6921463 | None:intergenic | 45.0% | |
| !! | CGGTCGTGAAAGTTTGTTAC+CGG | + | chr6_4:6921487-6921506 | None:intergenic | 45.0% |
| CGGTAACAAACTTTCACGAC+CGG | - | chr6_4:6921485-6921504 | Msa0974060:CDS | 45.0% | |
| !! | GGTGTTGTTGAGTTGAACGA+CGG | + | chr6_4:6921544-6921563 | None:intergenic | 45.0% |
| !! | GATGAAGTTGATGAATGCGG+TGG | + | chr6_4:6921575-6921594 | None:intergenic | 45.0% |
| CTGCTCAACAAGCATCACCA+AGG | - | chr6_4:6917722-6917741 | Msa0974060:CDS | 50.0% | |
| GGGGAAACTGATCCTCGATT+CGG | - | chr6_4:6918576-6918595 | Msa0974060:intron | 50.0% | |
| !! | CTCGATTCGGTGAGACATGT+CGG | - | chr6_4:6918589-6918608 | Msa0974060:intron | 50.0% |
| CAGTGCTTGAACATGTGCCT+CGG | + | chr6_4:6918622-6918641 | None:intergenic | 50.0% | |
| GCCTGCATCGTTTGAAGAAG+CGG | - | chr6_4:6918704-6918723 | Msa0974060:intron | 50.0% | |
| TTTGGCAAGCGTGGTTATGG+CGG | - | chr6_4:6918897-6918916 | Msa0974060:intron | 50.0% | |
| GGACACAAGCAAGTCCCATT+TGG | + | chr6_4:6919464-6919483 | None:intergenic | 50.0% | |
| ! | TGGGACTTGCTTGTGTCCAA+AGG | - | chr6_4:6919466-6919485 | Msa0974060:intron | 50.0% |
| ! | AGCTGCGGATTTGTTCGAAG+AGG | - | chr6_4:6919503-6919522 | Msa0974060:intron | 50.0% |
| ! | CGGATTTGTTCGAAGAGGCT+AGG | - | chr6_4:6919508-6919527 | Msa0974060:intron | 50.0% |
| TCTCGGTCTCATGTGCAGTT+TGG | - | chr6_4:6919684-6919703 | Msa0974060:CDS | 50.0% | |
| CGTTTCTCATCGTCGACATC+AGG | + | chr6_4:6919950-6919969 | None:intergenic | 50.0% | |
| CGACGATGAGAAACGTAGGT+TGG | - | chr6_4:6919955-6919974 | Msa0974060:CDS | 50.0% | |
| AAGCAGGAAGAGCAAGGAAC+AGG | - | chr6_4:6919993-6920012 | Msa0974060:CDS | 50.0% | |
| GGGTCCCACCAAATTCACAT+GGG | - | chr6_4:6920600-6920619 | Msa0974060:CDS | 50.0% | |
| TGGGCCCATGTGAATTTGGT+GGG | + | chr6_4:6920607-6920626 | None:intergenic | 50.0% | |
| ! | TTTAGTCGTAAGAGCGTGGG+GGG | - | chr6_4:6921049-6921068 | Msa0974060:CDS | 50.0% |
| !! | GGGGGCTTTGAACTTCTACT+CGG | - | chr6_4:6921067-6921086 | Msa0974060:CDS | 50.0% |
| !! | GGCTTTGAACTTCTACTCGG+AGG | - | chr6_4:6921070-6921089 | Msa0974060:CDS | 50.0% |
| CCACCATAGGTCACATGAGA+CGG | - | chr6_4:6921140-6921159 | Msa0974060:CDS | 50.0% | |
| CACCATAGGTCACATGAGAC+GGG | - | chr6_4:6921141-6921160 | Msa0974060:CDS | 50.0% | |
| ACATGAGACGGGTGTGGTTA+TGG | - | chr6_4:6921152-6921171 | Msa0974060:CDS | 50.0% | |
| GGGTGTGGTTATGGTGCATA+AGG | - | chr6_4:6921161-6921180 | Msa0974060:CDS | 50.0% | |
| !! | GTTGATTTGGTGAACGGCGA+CGG | + | chr6_4:6921392-6921411 | None:intergenic | 50.0% |
| GCTTGCGTGAAAAACGATGG+TGG | + | chr6_4:6921441-6921460 | None:intergenic | 50.0% | |
| TGTCACGCAAGCATTATCGC+CGG | - | chr6_4:6921465-6921484 | Msa0974060:CDS | 50.0% | |
| ATGAATGCGGTGGTGAACGA+CGG | + | chr6_4:6921565-6921584 | None:intergenic | 50.0% | |
| CGAACGCTCGAGAATCGGTA+TGG | + | chr6_4:6918403-6918422 | None:intergenic | 55.0% | |
| CGACATGTCTCACCGAATCG+AGG | + | chr6_4:6918591-6918610 | None:intergenic | 55.0% | |
| GACATGTCGGTATGTAGCCG+AGG | - | chr6_4:6918602-6918621 | Msa0974060:intron | 55.0% | |
| GCCGCTTCTTCAAACGATGC+AGG | + | chr6_4:6918708-6918727 | None:intergenic | 55.0% | |
| ! | GGTTATGGCGGAAAACCGTC+AGG | - | chr6_4:6918909-6918928 | Msa0974060:intron | 55.0% |
| CGGGTCCCACCAAATTCACA+TGG | - | chr6_4:6920599-6920618 | Msa0974060:CDS | 55.0% | |
| GTGGGCCCATGTGAATTTGG+TGG | + | chr6_4:6920608-6920627 | None:intergenic | 55.0% | |
| CCGTCTCATGTGACCTATGG+TGG | + | chr6_4:6921143-6921162 | None:intergenic | 55.0% | |
| CACCCGTCTCATGTGACCTA+TGG | + | chr6_4:6921146-6921165 | None:intergenic | 55.0% | |
| TAGGTCACATGAGACGGGTG+TGG | - | chr6_4:6921146-6921165 | Msa0974060:CDS | 55.0% | |
| GGTGAACGGCGAAGTGAAAC+TGG | + | chr6_4:6921336-6921355 | None:intergenic | 55.0% | |
| !! | CGGTGGTAGGAGTTGGTGAA+CGG | + | chr6_4:6921350-6921369 | None:intergenic | 55.0% |
| TGAACGACGGTGGTAGGAGT+TGG | + | chr6_4:6921357-6921376 | None:intergenic | 55.0% | |
| GTGAACGGCGAAGTGAACGA+CGG | + | chr6_4:6921370-6921389 | None:intergenic | 55.0% | |
| GGGTCATTGTCTCACTCCCG+AGG | + | chr6_4:6920920-6920939 | None:intergenic | 60.0% | |
| GCGAAGTGAACGACGGTGGT+AGG | + | chr6_4:6921363-6921382 | None:intergenic | 60.0% | |
| AACGGCGAAGTGAACGACGG+TGG | + | chr6_4:6921367-6921386 | None:intergenic | 60.0% | |
| TGGTGAACGGCGACGGTGAA+CGG | + | chr6_4:6921385-6921404 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 6917649 | 6921630 | 6917649 | ID=Msa0974060;Name=Msa0974060 |
| chr6_4 | mRNA | 6917649 | 6921630 | 6917649 | ID=Msa0974060-mRNA-1;Parent=Msa0974060;Name=Msa0974060-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|0.75|1|1|4|0|795 |
| chr6_4 | exon | 6920580 | 6921630 | 6920580 | ID=Msa0974060-mRNA-1:exon:2780;Parent=Msa0974060-mRNA-1 |
| chr6_4 | exon | 6919660 | 6920413 | 6919660 | ID=Msa0974060-mRNA-1:exon:2779;Parent=Msa0974060-mRNA-1 |
| chr6_4 | exon | 6919195 | 6919402 | 6919195 | ID=Msa0974060-mRNA-1:exon:2778;Parent=Msa0974060-mRNA-1 |
| chr6_4 | exon | 6917649 | 6918023 | 6917649 | ID=Msa0974060-mRNA-1:exon:2777;Parent=Msa0974060-mRNA-1 |
| chr6_4 | CDS | 6920580 | 6921630 | 6920580 | ID=Msa0974060-mRNA-1:cds;Parent=Msa0974060-mRNA-1 |
| chr6_4 | CDS | 6919660 | 6920413 | 6919660 | ID=Msa0974060-mRNA-1:cds;Parent=Msa0974060-mRNA-1 |
| chr6_4 | CDS | 6919195 | 6919402 | 6919195 | ID=Msa0974060-mRNA-1:cds;Parent=Msa0974060-mRNA-1 |
| chr6_4 | CDS | 6917649 | 6918023 | 6917649 | ID=Msa0974060-mRNA-1:cds;Parent=Msa0974060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
