AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0609430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609430 MtrunA17_Chr4g0042061 97.987 795 14 1 1 795 1 793 0.0 1597
Msa0609430 MtrunA17_Chr2g0319271 81.102 762 141 3 36 795 1 761 0.0 1276
Msa0609430 MtrunA17_Chr2g0280421 56.489 809 314 8 1 794 1 786 0.0 857
Msa0609430 MtrunA17_Chr4g0049011 58.348 581 209 7 217 784 72 632 0.0 638
Msa0609430 MtrunA17_Chr1g0191851 45.974 385 183 7 407 784 115 481 6.23e-96 316
Msa0609430 MtrunA17_Chr2g0312631 45.600 375 189 5 408 782 358 717 4.52e-95 319
Msa0609430 MtrunA17_Chr7g0272871 45.407 381 183 8 411 784 99 461 1.90e-92 305
Msa0609430 MtrunA17_Chr5g0411971 39.655 464 241 7 342 784 286 731 6.39e-91 308
Msa0609430 MtrunA17_Chr7g0271961 41.648 449 207 10 352 780 316 729 1.35e-89 303
Msa0609430 MtrunA17_Chr5g0421521 43.636 385 199 5 400 784 340 706 1.26e-88 300
Msa0609430 MtrunA17_Chr5g0421591 39.009 464 244 7 342 784 261 706 1.52e-88 299
Msa0609430 MtrunA17_Chr1g0195111 45.405 370 177 9 422 785 384 734 1.29e-87 298
Msa0609430 MtrunA17_Chr1g0192481 43.597 367 179 8 422 780 46 392 1.26e-84 280
Msa0609430 MtrunA17_Chr3g0102921 39.161 429 231 10 365 778 369 782 3.35e-81 282
Msa0609430 MtrunA17_Chr5g0447041 34.727 550 258 16 310 780 282 809 1.26e-80 281
Msa0609430 MtrunA17_Chr8g0369881 34.074 540 288 15 252 786 731 1207 4.29e-76 268
Msa0609430 MtrunA17_Chr1g0191181 39.747 395 220 7 382 775 37 414 5.50e-76 258
Msa0609430 MtrunA17_Chr5g0407791 40.761 368 199 5 406 773 861 1209 3.22e-75 266
Msa0609430 MtrunA17_Chr7g0257301 35.654 474 232 12 340 780 316 749 2.29e-74 262
Msa0609430 MtrunA17_Chr4g0045381 40.390 359 175 12 431 771 190 527 1.99e-61 226
Msa0609430 MtrunA17_Chr4g0069141 39.178 365 183 12 425 771 144 487 5.54e-57 212
Msa0609430 MtrunA17_Chr2g0327581 37.709 358 204 8 425 771 39 388 1.15e-56 210
Msa0609430 MtrunA17_Chr1g0182151 38.506 348 197 8 434 771 54 394 5.29e-56 208
Msa0609430 MtrunA17_Chr2g0322291 39.722 360 170 10 434 771 88 422 5.78e-56 209
Msa0609430 MtrunA17_Chr7g0266631 37.255 357 193 10 434 771 9 353 1.84e-55 206
Msa0609430 MtrunA17_Chr1g0178411 37.640 356 193 10 434 771 13 357 4.42e-55 205
Msa0609430 MtrunA17_Chr3g0122121 37.190 363 178 11 435 773 99 435 9.64e-55 205
Msa0609430 MtrunA17_Chr8g0377731 36.483 381 184 12 420 773 40 389 5.61e-53 199
Msa0609430 MtrunA17_Chr8g0367581 36.088 363 206 5 421 783 133 469 8.53e-53 199
Msa0609430 MtrunA17_Chr1g0193221 36.286 350 180 9 435 771 4 323 3.09e-52 197
Msa0609430 MtrunA17_Chr3g0132921 36.103 349 200 10 434 771 9 345 1.76e-51 188
Msa0609430 MtrunA17_Chr3g0134191 37.637 364 188 12 435 771 9 360 4.22e-50 190
Msa0609430 MtrunA17_Chr5g0427481 35.920 348 201 9 435 771 18 354 6.90e-50 190
Msa0609430 MtrunA17_Chr4g0053211 35.792 366 198 12 434 771 12 368 1.18e-49 189
Msa0609430 MtrunA17_Chr1g0153061 36.464 362 195 12 435 771 9 360 2.90e-49 187
Msa0609430 MtrunA17_Chr1g0152231 36.182 351 186 10 435 771 4 330 1.12e-48 185
Msa0609430 MtrunA17_Chr7g0269681 50.000 172 86 0 614 785 33 204 3.39e-47 175
Msa0609430 MtrunA17_Chr8g0386891 51.515 165 80 0 622 786 4 168 5.98e-47 172
Msa0609430 MtrunA17_Chr2g0307481 36.127 346 189 11 435 770 69 392 2.84e-46 175
Msa0609430 MtrunA17_Chr4g0062291 37.500 296 160 7 481 771 176 451 3.20e-44 170
Msa0609430 MtrunA17_Chr6g0484501 50.867 173 85 0 614 786 26 198 9.43e-44 158
Msa0609430 MtrunA17_Chr5g0398521 32.791 369 203 11 431 775 54 401 2.11e-43 169
Msa0609430 MtrunA17_Chr4g0035661 35.393 356 197 10 432 782 87 414 7.74e-43 168
Msa0609430 MtrunA17_Chr7g0245931 33.424 368 201 11 431 775 49 395 8.15e-42 164
Msa0609430 MtrunA17_Chr3g0145071 35.227 352 195 10 434 780 99 422 2.49e-41 163
Msa0609430 MtrunA17_Chr3g0101021 35.783 313 164 7 481 771 108 405 6.97e-41 162
Msa0609430 MtrunA17_Chr6g0483701 35.216 301 165 6 477 771 73 349 1.23e-40 161
Msa0609430 MtrunA17_Chr5g0445211 33.784 370 190 10 427 771 67 406 2.41e-40 160
Msa0609430 MtrunA17_Chr8g0390991 52.830 159 75 0 622 780 4 162 8.18e-40 155
Msa0609430 MtrunA17_Chr6g0485471 33.989 356 202 7 435 782 116 446 1.42e-39 156
Msa0609430 MtrunA17_Chr7g0238581 33.815 346 195 11 435 770 26 347 2.91e-39 154
Msa0609430 MtrunA17_Chr4g0036001 35.570 298 156 8 480 768 70 340 3.01e-39 156
Msa0609430 MtrunA17_Chr2g0295881 34.316 373 190 14 435 781 198 541 1.90e-38 154
Msa0609430 MtrunA17_Chr7g0258991 33.711 353 197 10 432 776 71 394 2.12e-38 154
Msa0609430 MtrunA17_Chr4g0070001 35.430 302 163 8 480 776 187 461 5.41e-38 153
Msa0609430 MtrunA17_Chr5g0405181 35.216 301 155 8 480 769 68 339 5.97e-38 152
Msa0609430 MtrunA17_Chr2g0331761 34.473 351 197 10 435 777 186 511 6.99e-38 151
Msa0609430 MtrunA17_Chr8g0372171 34.884 301 156 8 480 769 67 338 9.23e-38 152
Msa0609430 MtrunA17_Chr3g0142261 32.471 348 192 9 435 769 20 337 6.06e-37 150
Msa0609430 MtrunA17_Chr8g0386901 35.905 337 177 12 259 584 324 632 2.60e-36 146
Msa0609430 MtrunA17_Chr4g0067421 31.707 369 203 8 435 781 206 547 2.71e-36 147
Msa0609430 MtrunA17_Chr6g0484511 28.829 444 260 13 174 586 21 439 6.89e-34 136
Msa0609430 MtrunA17_Chr8g0390981 45.977 174 74 5 422 586 503 665 2.96e-33 137
Msa0609430 MtrunA17_Chr7g0269691 44.910 167 81 6 422 584 388 547 4.48e-33 135
Msa0609430 MtrunA17_Chr1g0187411 30.028 363 195 13 460 788 147 484 2.48e-30 128
Msa0609430 MtrunA17_Chr3g0142841 27.622 286 155 9 483 749 145 397 1.90e-17 87.4
Msa0609430 MtrunA17_Chr6g0470541 26.263 297 189 8 481 775 51 319 7.35e-17 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609430 AT5G54670.1 64.163 759 251 4 42 793 8 752 0.0 993
Msa0609430 AT5G54670.2 64.163 759 251 4 42 793 8 752 0.0 993
Msa0609430 AT4G27180.1 63.026 760 249 5 42 793 8 743 0.0 961
Msa0609430 AT4G27180.2 63.026 760 249 5 42 793 8 743 0.0 961
Msa0609430 AT4G21270.1 61.015 808 285 9 1 794 1 792 0.0 941
Msa0609430 AT4G05190.1 59.876 805 296 7 1 794 1 789 0.0 920
Msa0609430 AT5G54670.3 64.245 702 230 4 99 793 5 692 0.0 919
Msa0609430 AT4G05190.2 61.719 768 273 6 38 794 19 776 0.0 916
Msa0609430 AT1G72250.1 41.270 504 251 12 301 782 345 825 2.71e-98 331
Msa0609430 AT1G72250.2 45.647 425 205 9 360 782 434 834 3.59e-98 331
Msa0609430 AT1G72250.4 45.647 425 205 9 360 782 445 845 4.62e-98 331
Msa0609430 AT1G72250.3 45.647 425 205 9 360 782 446 846 4.67e-98 331
Msa0609430 AT5G27550.2 43.026 423 219 6 363 784 65 466 2.21e-94 312
Msa0609430 AT5G27550.1 43.026 423 219 6 363 784 65 466 2.21e-94 312
Msa0609430 AT2G22610.2 45.078 386 192 5 400 784 383 749 8.41e-93 314
Msa0609430 AT2G22610.3 45.078 386 192 5 400 784 384 750 8.96e-93 314
Msa0609430 AT2G22610.1 45.078 386 192 5 400 784 383 749 9.02e-93 314
Msa0609430 AT1G63640.5 38.432 523 249 14 311 786 306 802 1.67e-91 310
Msa0609430 AT1G63640.1 38.432 523 249 14 311 786 316 812 1.88e-91 310
Msa0609430 AT1G63640.4 38.432 523 249 14 311 786 316 812 1.88e-91 310
Msa0609430 AT1G63640.3 38.432 523 249 14 311 786 316 812 1.88e-91 310
Msa0609430 AT1G73860.2 37.355 605 312 18 209 786 203 767 1.09e-90 306
Msa0609430 AT1G73860.1 37.355 605 312 18 209 786 286 850 5.43e-90 305
Msa0609430 AT1G09170.4 45.304 362 178 7 422 780 422 766 1.98e-89 300
Msa0609430 AT1G63640.2 37.859 523 245 14 311 786 316 805 2.55e-89 304
Msa0609430 AT1G09170.3 45.304 362 178 7 422 780 422 766 2.87e-89 299
Msa0609430 AT1G09170.7 45.304 362 178 7 422 780 422 766 2.87e-89 299
Msa0609430 AT1G09170.2 45.304 362 178 7 422 780 422 766 5.71e-89 300
Msa0609430 AT1G09170.5 45.304 362 178 7 422 780 422 766 3.35e-88 301
Msa0609430 AT2G47500.2 45.879 364 172 7 422 780 387 730 1.15e-87 298
Msa0609430 AT2G47500.1 45.879 364 172 7 422 780 387 730 1.90e-87 298
Msa0609430 AT5G41310.1 44.504 373 161 6 422 786 410 744 1.57e-86 295
Msa0609430 AT5G27000.1 44.722 360 184 4 422 780 382 727 6.69e-86 293
Msa0609430 AT1G18410.5 36.598 582 286 16 235 786 283 811 3.65e-85 291
Msa0609430 AT1G18410.3 36.770 582 293 17 235 786 293 829 6.84e-85 291
Msa0609430 AT1G18410.2 36.770 582 293 17 235 786 293 829 6.84e-85 291
Msa0609430 AT3G44730.1 39.746 473 212 16 329 780 291 711 7.58e-85 292
Msa0609430 AT3G44730.4 39.746 473 212 16 329 780 291 711 7.58e-85 292
Msa0609430 AT3G44730.2 39.915 471 214 15 329 780 336 756 7.62e-85 293
Msa0609430 AT3G44730.3 39.915 471 214 15 329 780 336 756 7.62e-85 293
Msa0609430 AT1G18410.1 36.598 582 286 16 235 786 436 964 8.30e-84 290
Msa0609430 AT1G18410.4 36.770 582 293 17 235 786 436 972 1.06e-83 290
Msa0609430 AT3G10310.1 43.617 376 181 10 412 780 344 695 6.18e-82 282
Msa0609430 AT3G10310.2 43.351 376 182 9 412 780 344 695 7.78e-82 282
Msa0609430 AT5G27950.1 40.299 402 214 8 379 775 25 405 7.07e-76 258
Msa0609430 AT5G65930.1 32.201 677 366 19 103 771 614 1205 2.37e-75 267
Msa0609430 AT5G65930.3 32.201 677 366 19 103 771 621 1212 2.43e-75 267
Msa0609430 AT5G65930.2 32.201 677 366 19 103 771 615 1206 2.43e-75 267
Msa0609430 AT1G09170.6 45.031 322 157 7 422 740 422 726 1.86e-74 257
Msa0609430 AT1G09170.8 45.031 322 157 7 422 740 422 726 1.86e-74 257
Msa0609430 AT1G09170.1 40.608 362 159 6 422 780 422 730 2.24e-73 259
Msa0609430 AT1G55550.1 39.444 360 196 8 419 777 76 414 2.16e-72 254
Msa0609430 AT3G19050.1 41.127 355 172 12 434 771 193 527 7.85e-63 231
Msa0609430 AT3G17360.2 38.983 354 181 10 434 771 168 502 1.75e-58 217
Msa0609430 AT3G17360.3 38.983 354 181 10 434 771 168 502 1.78e-58 217
Msa0609430 AT3G17360.1 38.983 354 181 10 434 771 168 502 1.81e-58 217
Msa0609430 AT2G36200.1 38.056 360 186 9 434 771 12 356 8.81e-58 214
Msa0609430 AT2G36200.2 38.056 360 186 9 434 771 12 356 1.36e-57 213
Msa0609430 AT3G45850.2 37.746 355 189 10 434 771 55 394 8.74e-57 211
Msa0609430 AT3G45850.1 37.746 355 189 10 434 771 55 394 8.74e-57 211
Msa0609430 AT3G44050.1 39.831 354 178 10 434 771 93 427 4.55e-56 209
Msa0609430 AT2G28620.3 37.571 354 191 11 434 771 50 389 1.55e-55 207
Msa0609430 AT2G28620.2 37.571 354 191 11 434 771 50 389 1.55e-55 207
Msa0609430 AT2G37420.1 37.607 351 195 10 434 771 48 387 1.79e-55 207
Msa0609430 AT2G37420.2 37.607 351 195 10 434 771 48 387 1.79e-55 207
Msa0609430 AT2G28620.1 37.571 354 191 11 434 771 50 389 1.84e-55 207
Msa0609430 AT4G14150.1 36.288 361 181 10 435 773 92 425 6.58e-54 203
Msa0609430 AT5G65460.2 35.328 351 201 5 421 771 125 449 1.13e-53 202
Msa0609430 AT3G50240.2 36.986 365 189 10 435 771 26 377 1.34e-53 201
Msa0609430 AT5G65460.6 35.328 351 201 5 421 771 125 449 1.55e-53 201
Msa0609430 AT5G65460.1 35.328 351 201 5 421 771 125 449 1.82e-53 201
Msa0609430 AT5G65460.4 35.328 351 201 5 421 771 125 449 2.00e-53 201
Msa0609430 AT3G50240.4 36.986 365 189 10 435 771 26 377 4.02e-53 200
Msa0609430 AT3G50240.1 36.986 365 189 10 435 771 26 377 4.47e-53 200
Msa0609430 AT5G65460.3 34.930 355 204 5 421 771 125 456 4.93e-53 200
Msa0609430 AT3G23670.2 36.639 363 177 11 435 773 97 430 8.22e-53 199
Msa0609430 AT3G23670.1 36.639 363 177 11 435 773 97 430 1.27e-52 199
Msa0609430 AT5G10470.2 35.411 353 198 7 421 771 129 453 1.56e-51 196
Msa0609430 AT5G10470.1 35.411 353 198 7 421 771 129 453 1.65e-51 196
Msa0609430 AT5G47820.2 36.957 368 191 14 434 771 11 367 2.47e-51 194
Msa0609430 AT5G47820.1 36.957 368 191 14 434 771 11 367 2.47e-51 194
Msa0609430 AT3G10180.2 35.429 350 184 7 435 771 4 324 2.51e-51 195
Msa0609430 AT3G10180.1 35.429 350 184 7 435 771 4 324 2.70e-51 195
Msa0609430 AT3G63480.2 36.188 362 191 14 434 780 3 339 2.14e-48 178
Msa0609430 AT3G63480.1 36.740 362 193 16 434 780 3 343 3.98e-48 177
Msa0609430 AT1G59540.1 36.443 343 186 10 435 770 4 321 4.84e-48 183
Msa0609430 AT5G60930.1 34.160 363 201 11 435 771 7 357 2.56e-46 179
Msa0609430 AT5G60930.3 34.160 363 201 11 435 771 7 357 2.78e-46 179
Msa0609430 AT5G60930.2 34.160 363 201 11 435 771 7 357 3.09e-46 179
Msa0609430 AT1G18550.1 36.949 295 162 7 481 771 204 478 1.21e-44 172
Msa0609430 AT1G12430.1 32.249 369 196 12 435 775 71 413 2.99e-43 169
Msa0609430 AT1G12430.2 32.249 369 196 12 435 775 71 413 3.06e-43 169
Msa0609430 AT2G21380.2 36.565 361 192 12 427 780 97 427 4.92e-43 169
Msa0609430 AT2G21380.1 36.565 361 192 12 427 780 97 427 4.92e-43 169
Msa0609430 AT3G54870.3 34.603 315 168 9 475 771 144 438 6.92e-43 168
Msa0609430 AT3G54870.2 34.603 315 168 9 475 771 144 438 7.40e-43 168
Msa0609430 AT3G54870.1 34.603 315 168 9 475 771 144 438 7.52e-43 168
Msa0609430 AT4G39050.1 35.484 372 203 12 418 782 82 423 9.21e-43 168
Msa0609430 AT3G50240.3 39.350 277 139 6 520 771 3 275 1.37e-42 167
Msa0609430 AT5G06670.2 34.746 354 198 10 429 776 61 387 4.00e-42 166
Msa0609430 AT5G06670.3 34.746 354 198 10 429 776 61 387 4.00e-42 166
Msa0609430 AT1G01950.2 32.703 370 201 12 431 775 57 403 4.38e-42 166
Msa0609430 AT1G01950.1 32.703 370 201 12 431 775 57 403 4.89e-42 166
Msa0609430 AT1G01950.3 32.703 370 201 12 431 775 57 403 6.40e-42 165
Msa0609430 AT5G06670.5 34.746 354 198 10 429 776 61 387 7.88e-42 164
Msa0609430 AT5G06670.8 34.746 354 198 10 429 776 61 387 8.82e-42 164
Msa0609430 AT5G06670.4 34.746 354 198 10 429 776 61 387 8.82e-42 164
Msa0609430 AT5G06670.7 34.746 354 198 10 429 776 61 387 8.82e-42 164
Msa0609430 AT3G49650.1 36.306 314 175 7 470 778 54 347 3.15e-41 162
Msa0609430 AT5G27950.2 39.592 245 137 4 534 775 3 239 3.20e-41 157
Msa0609430 AT1G21730.1 35.014 357 197 11 431 780 72 400 1.42e-40 161
Msa0609430 AT5G06670.6 34.160 363 197 11 429 776 61 396 1.49e-40 161
Msa0609430 AT5G06670.1 34.160 363 197 11 429 776 61 396 1.49e-40 161
Msa0609430 AT1G18370.1 36.242 298 160 8 480 771 77 350 4.36e-40 160
Msa0609430 AT3G12020.4 33.618 351 200 10 432 776 67 390 2.08e-39 157
Msa0609430 AT3G12020.1 33.618 351 200 10 432 776 67 390 2.08e-39 157
Msa0609430 AT3G12020.3 33.333 351 201 9 432 776 67 390 4.36e-39 157
Msa0609430 AT3G12020.2 33.333 351 201 9 432 776 67 390 4.36e-39 157
Msa0609430 AT3G16060.1 33.903 351 199 7 435 777 170 495 9.48e-39 154
Msa0609430 AT3G43210.3 37.415 294 153 7 481 768 74 342 1.66e-38 154
Msa0609430 AT3G43210.5 37.415 294 153 7 481 768 74 342 1.66e-38 154
Msa0609430 AT3G43210.2 37.415 294 153 7 481 768 74 342 1.66e-38 154
Msa0609430 AT3G43210.4 37.415 294 153 7 481 768 74 342 1.66e-38 154
Msa0609430 AT3G43210.1 37.415 294 153 7 481 768 74 342 1.66e-38 154
Msa0609430 AT3G51150.2 35.880 301 153 8 480 769 65 336 2.92e-38 154
Msa0609430 AT3G51150.4 35.880 301 153 8 480 769 65 336 2.92e-38 154
Msa0609430 AT3G51150.3 35.880 301 153 8 480 769 65 336 2.92e-38 154
Msa0609430 AT3G51150.1 35.880 301 153 8 480 769 65 336 3.63e-38 154
Msa0609430 AT4G38950.3 34.122 296 163 6 480 768 59 329 7.03e-38 152
Msa0609430 AT4G38950.5 34.122 296 163 6 480 768 59 329 7.03e-38 152
Msa0609430 AT4G38950.4 34.122 296 163 6 480 768 59 329 7.03e-38 152
Msa0609430 AT4G38950.1 34.122 296 163 6 480 768 59 329 7.03e-38 152
Msa0609430 AT4G38950.2 34.122 296 163 6 480 768 59 329 7.03e-38 152
Msa0609430 AT4G24170.1 35.762 302 157 8 478 769 47 321 1.09e-36 149
Msa0609430 AT4G24170.2 35.762 302 157 8 478 769 47 321 1.09e-36 149
Msa0609430 AT5G66310.2 35.354 297 160 7 480 769 66 337 1.11e-36 149
Msa0609430 AT5G66310.3 35.354 297 160 7 480 769 66 337 1.11e-36 149
Msa0609430 AT5G66310.1 35.354 297 160 7 480 769 66 337 1.11e-36 149
Msa0609430 AT3G20150.2 33.016 315 174 8 481 773 136 435 3.38e-36 147
Msa0609430 AT3G20150.1 33.016 315 174 8 481 773 136 435 3.42e-36 147
Msa0609430 AT5G02370.1 31.250 352 192 12 434 770 20 336 7.26e-36 144
Msa0609430 AT3G16630.2 31.476 359 199 7 435 773 194 525 2.26e-35 144
Msa0609430 AT3G16630.1 31.476 359 199 7 435 773 194 525 2.26e-35 144
Msa0609430 AT1G59540.2 36.981 265 142 6 534 792 3 248 1.05e-34 142
Msa0609430 AT2G21300.2 33.557 298 162 8 480 768 70 340 1.29e-34 142
Msa0609430 AT2G21300.4 33.557 298 162 8 480 768 70 340 1.29e-34 142
Msa0609430 AT2G21300.3 33.557 298 162 8 480 768 70 340 1.29e-34 142
Msa0609430 AT2G21300.1 33.557 298 162 8 480 768 70 340 1.29e-34 142
Msa0609430 AT2G21300.5 33.557 298 162 8 480 768 70 340 1.29e-34 142
Msa0609430 AT4G14330.1 31.476 359 210 14 443 785 42 380 6.54e-33 137
Msa0609430 AT1G01950.4 34.276 283 142 9 516 775 1 262 1.29e-32 135
Msa0609430 AT5G42490.2 34.836 244 127 8 480 717 55 272 5.37e-24 108
Msa0609430 AT5G42490.1 34.836 244 127 8 480 717 55 272 5.98e-24 108
Msa0609430 AT5G65460.5 33.014 209 121 3 562 770 13 202 3.39e-23 106
Msa0609430 AT3G51150.5 41.975 162 77 4 618 769 29 183 1.19e-21 101
Msa0609430 AT5G23910.2 27.097 310 191 11 476 784 54 329 2.37e-16 84.0
Msa0609430 AT5G23910.1 27.097 310 191 11 476 784 50 325 2.40e-16 84.0
Msa0609430 AT1G20060.10 28.873 284 164 8 483 751 165 425 5.58e-14 76.6
Msa0609430 AT1G20060.8 28.873 284 164 8 483 751 165 425 6.06e-14 76.6
Msa0609430 AT1G20060.4 28.873 284 164 8 483 751 165 425 6.43e-14 76.3
Msa0609430 AT1G20060.7 28.873 284 164 8 483 751 165 425 6.61e-14 76.3
Msa0609430 AT1G20060.5 28.873 284 164 8 483 751 165 425 6.61e-14 76.3
Msa0609430 AT1G20060.6 28.873 284 164 8 483 751 165 425 6.61e-14 76.3
Msa0609430 AT1G20060.9 28.873 284 164 8 483 751 165 425 7.14e-14 76.3
Msa0609430 AT1G20060.2 28.873 284 164 8 483 751 165 425 7.46e-14 76.3
Msa0609430 AT1G20060.3 28.873 284 164 8 483 751 165 425 7.86e-14 76.3

Find 157 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACAAGAGATATACCATTT+TGG 0.187916 4_2:+56766640 None:intergenic
AAAATTACACAATACCATTT+TGG 0.194447 4_2:-56766870 Msa0609430:intron
ACAATCAAACATGACGTAAA+TGG 0.257325 4_2:-56765838 Msa0609430:CDS
GAAAGAAAGGTTTAATTATA+AGG 0.258842 4_2:-56769154 Msa0609430:intron
CCTGGACATCCTGATGAAAA+AGG 0.267155 4_2:-56766151 Msa0609430:CDS
CCAGAAGTTTCCATTGATAA+TGG 0.291607 4_2:+56766681 None:intergenic
GTGTTCACTCTTCGAATATA+TGG 0.292968 4_2:-56765438 Msa0609430:CDS
ATATGGTGGATTATATAAAA+AGG 0.299359 4_2:-56768679 Msa0609430:CDS
TTAGGAAAGATGTGAAAATA+TGG 0.299763 4_2:-56768696 Msa0609430:intron
TGCCTTATTCTTCCATTAAT+CGG 0.302133 4_2:+56769312 None:intergenic
GGTTCAATGAATTACCAAAA+TGG 0.302426 4_2:+56766856 None:intergenic
CAAATTTAAAAGAATGCTTC+TGG 0.303819 4_2:+56766517 None:intergenic
AGCAATGCTGGATCGGATTA+TGG 0.321476 4_2:-56769234 Msa0609430:CDS
AGGAAGATCATGTGCCATTC+AGG 0.324338 4_2:-56765030 Msa0609430:CDS
AGAGTAAATGCTTGTGAGAT+TGG 0.335718 4_2:-56764758 Msa0609430:CDS
TGGCACATGATCTTCCTTCT+TGG 0.336040 4_2:+56765036 None:intergenic
CCATTATCAATGGAAACTTC+TGG 0.339393 4_2:-56766681 Msa0609430:CDS
AAGATCATCCTTCTGCTTTG+TGG 0.340847 4_2:+56767507 None:intergenic
TTGATTGTGTATTGCTTTCC+AGG 0.340915 4_2:+56765853 None:intergenic
TCAGAATATAAACTTATAGA+AGG 0.341562 4_2:-56766908 Msa0609430:CDS
TTTACAAGAGAAATTGATAA+AGG 0.345900 4_2:-56768373 Msa0609430:CDS
AAGTGCTCTTGATGGTTATA+AGG 0.346220 4_2:-56766430 Msa0609430:intron
GATGTATCACGCGTGGAAAA+TGG 0.352045 4_2:-56765880 Msa0609430:CDS
GGAGAACTCTTGCATTGAAT+TGG 0.352306 4_2:-56767368 Msa0609430:CDS
CCCTCTCTCCCTCCAGTTGA+GGG 0.352773 4_2:-56769597 Msa0609430:intron
GCCTATGGTCAAACAGGATC+AGG 0.373014 4_2:-56766199 Msa0609430:CDS
ATCTTTGCCTATGGTCAAAC+AGG 0.382932 4_2:-56766205 Msa0609430:CDS
TCATGAAACTAAAAGAATCT+AGG 0.388183 4_2:-56767390 Msa0609430:CDS
CTCCGATTAATGGAAGAATA+AGG 0.389381 4_2:-56769314 Msa0609430:CDS
CTTGTACAAAGTGCTCTTGA+TGG 0.389788 4_2:-56766438 Msa0609430:CDS
ATGGTGGAGACTCCGATTAA+TGG 0.397749 4_2:-56769324 Msa0609430:CDS
AGGTCTTCCCATCATTGTAT+AGG 0.402460 4_2:+56766171 None:intergenic
TCAGAACACCTTGTACTTGT+TGG 0.402581 4_2:+56765271 None:intergenic
CATATCACCTGATCCTTCTT+CGG 0.408441 4_2:-56764816 Msa0609430:CDS
GGAATTGACCTAGCCCAAAA+TGG 0.409411 4_2:-56766654 Msa0609430:intron
CTGAATCTAATTGACCTTGC+TGG 0.411776 4_2:-56765252 Msa0609430:CDS
TTCTCTTGTATAAATTGAAA+AGG 0.414560 4_2:-56764464 Msa0609430:three_prime_UTR
CGCGTGGAAAATGGTACTCC+TGG 0.426949 4_2:-56765871 Msa0609430:CDS
ATACCTGAGTTTCTCTCAAC+CGG 0.433179 4_2:+56765193 None:intergenic
TAGGTTTGCATCTTTGCCTA+TGG 0.434502 4_2:-56766214 Msa0609430:CDS
TTGAAGCAGAATCCCTCAAC+TGG 0.434883 4_2:+56769585 None:intergenic
GACATTAAAAGCAAATGAAC+TGG 0.438610 4_2:-56767338 Msa0609430:CDS
ATTGAAAGAGAATCAAATAA+AGG 0.441172 4_2:-56767218 Msa0609430:CDS
AACAAATTGAACTATTAGAA+TGG 0.449805 4_2:+56764522 None:intergenic
TCCCTCTCTCCCTCCAGTTG+AGG 0.453562 4_2:-56769598 Msa0609430:intron
TCTGTGCCACGACTTTCATC+TGG 0.453608 4_2:+56766723 None:intergenic
GATGTGTGTGTGAGTGATAA+TGG 0.455909 4_2:+56769535 None:intergenic
ATTCAGTTATCCATTATCAA+TGG 0.455935 4_2:-56766691 Msa0609430:CDS
AGTAGCTCGTCTCAAGGTCT+TGG 0.457932 4_2:+56768633 None:intergenic
AGCCGCAGAGAAGAAATTGC+AGG 0.462812 4_2:-56767176 Msa0609430:intron
ATGATTAAACAGCCTTGTCT+TGG 0.465469 4_2:-56764869 Msa0609430:intron
TTTGCGCTTGAGATAATTGA+CGG 0.466217 4_2:+56767428 None:intergenic
TTGAGGGATTCTGCTTCAAA+TGG 0.470108 4_2:-56769581 Msa0609430:exon
AGTGCTCCTCCGAGCAATGC+TGG 0.470399 4_2:-56769246 Msa0609430:CDS
CTTTCAAAGAGTGGTTCAAC+CGG 0.471546 4_2:-56765219 Msa0609430:CDS
TTAAACAGCCTTGTCTTGGC+GGG 0.484406 4_2:-56764865 Msa0609430:intron
CCCTGATCCTGTTTGACCAT+AGG 0.486954 4_2:+56766198 None:intergenic
AGGGAAAACCTATACAATGA+TGG 0.487535 4_2:-56766179 Msa0609430:CDS
TAAATCAAGCTGCAAATAGC+AGG 0.488065 4_2:-56765750 Msa0609430:intron
GGCTTAAGGTTTGTATCAGA+TGG 0.488434 4_2:-56768658 Msa0609430:CDS
AGAGATGCTGCTCAAAATCA+AGG 0.490393 4_2:-56768445 Msa0609430:CDS
TTAATAGTCTTCTCAAGAAG+AGG 0.493160 4_2:-56767530 Msa0609430:intron
TCCTCCGAGCAATGCTGGAT+CGG 0.494690 4_2:-56769241 Msa0609430:CDS
GAGAACATCGCCATGCTAAA+GGG 0.497657 4_2:-56767851 Msa0609430:CDS
TCTCCACCATTGTTTCTAGC+AGG 0.498530 4_2:+56769337 None:intergenic
AGTCTCAACAACCTCAAGGC+TGG 0.498705 4_2:-56766087 Msa0609430:CDS
CATGAAACTAAAAGAATCTA+GGG 0.501905 4_2:-56767389 Msa0609430:CDS
GGAGAACATCGCCATGCTAA+AGG 0.503104 4_2:-56767852 Msa0609430:CDS
CGACTTTCATCTGGCAACAA+AGG 0.504138 4_2:+56766732 None:intergenic
CATATTTGCCTTGGCCAAGA+AGG 0.504143 4_2:-56765050 Msa0609430:CDS
GTAAGCTTTGAGTTCCTGAA+TGG 0.504300 4_2:+56765016 None:intergenic
AGAAAAGAGGGTACCTCTGA+AGG 0.504818 4_2:+56769505 None:intergenic
CTTTAACAGTTGTGAATGGC+GGG 0.505806 4_2:-56769287 Msa0609430:CDS
TGGTTACCAAAATTCAAAAC+CGG 0.508924 4_2:-56769561 Msa0609430:CDS
AGTTTCTCTCAACCGGTCAC+CGG 0.509568 4_2:+56765200 None:intergenic
TCACCTGATCCTTCTTCGGT+TGG 0.511165 4_2:-56764812 Msa0609430:CDS
AGTGACTCGCCAACCGAAGA+AGG 0.511481 4_2:+56764803 None:intergenic
GGAAAAGTTAAAGAATTCAC+TGG 0.512627 4_2:-56768600 Msa0609430:CDS
TCGCCAACCGAAGAAGGATC+AGG 0.514072 4_2:+56764809 None:intergenic
ATTAAACAGCCTTGTCTTGG+CGG 0.514238 4_2:-56764866 Msa0609430:intron
GACGAGCTACTCAATAGATC+AGG 0.514609 4_2:-56768621 Msa0609430:CDS
ATGCACTTGACTGCTACAAA+TGG 0.519825 4_2:+56764645 None:intergenic
ATGATCTTCCTTCTTGGCCA+AGG 0.523814 4_2:+56765042 None:intergenic
CAAGCTTTAACAGTTGTGAA+TGG 0.525226 4_2:-56769291 Msa0609430:CDS
CATTTACTCTAGAAGCAAAC+CGG 0.529939 4_2:+56764771 None:intergenic
TTATAGAAGGGGAGAGGCTG+CGG 0.534444 4_2:-56766895 Msa0609430:CDS
GGGAAAACCTATACAATGAT+GGG 0.535898 4_2:-56766178 Msa0609430:CDS
CAGAATATAAACTTATAGAA+GGG 0.536777 4_2:-56766907 Msa0609430:CDS
GGAAAGATGTGAAAATATGG+TGG 0.536845 4_2:-56768693 Msa0609430:CDS
GTGAATGGCGGGCACGATGT+TGG 0.538827 4_2:-56769276 Msa0609430:CDS
TGTAGATAATAAATCGCGAA+TGG 0.540795 4_2:+56765918 None:intergenic
AGAGTCAGTAGCGCGGCCAT+TGG 0.545473 4_2:+56764718 None:intergenic
CAAACGTGTAGAGAAAGAAA+AGG 0.546172 4_2:-56767885 Msa0609430:CDS
GAGGGTACCTCTGAAGGGGT+TGG 0.550883 4_2:+56769511 None:intergenic
GCCTCACGCGACAGAATACA+CGG 0.553941 4_2:+56766754 None:intergenic
GAAAAGAGGGTACCTCTGAA+GGG 0.554971 4_2:+56769506 None:intergenic
GAGACAAGGACAGAATTTGA+AGG 0.556299 4_2:-56766974 Msa0609430:CDS
CTTATACATTTCATTGAGCG+AGG 0.556900 4_2:+56767988 None:intergenic
GAGTGATGTCATATTTGCCT+TGG 0.561542 4_2:-56765059 Msa0609430:CDS
AAAGGAAGAAGCAGAGAAGT+CGG 0.562965 4_2:-56768355 Msa0609430:intron
CGCTCAATGAAATGTATAAG+CGG 0.563639 4_2:-56767985 Msa0609430:CDS
TGTTTCTGATCTTACAGTAG+TGG 0.564567 4_2:-56765806 Msa0609430:CDS
GCTGCTCAAAATCAAGGAAG+AGG 0.565783 4_2:-56768439 Msa0609430:CDS
TCGAATATATGGTGTAAATG+AGG 0.566475 4_2:-56765427 Msa0609430:intron
AGAGTGGTTCAACCGGTGAC+CGG 0.567009 4_2:-56765212 Msa0609430:CDS
ATCTACAAACAGATCATCAT+CGG 0.569372 4_2:-56765902 Msa0609430:CDS
AGGCTGGAAATACGAAATGC+AGG 0.571436 4_2:-56766071 Msa0609430:intron
AGTGAAGTTTATTCTATGAG+AGG 0.574758 4_2:-56767481 Msa0609430:CDS
AGCGAGCGTCTTTCAAAGAG+TGG 0.576346 4_2:-56765228 Msa0609430:CDS
TAAACAGCCTTGTCTTGGCG+GGG 0.576562 4_2:-56764864 Msa0609430:intron
AGAAGAGGCCACAAAGCAGA+AGG 0.576631 4_2:-56767515 Msa0609430:CDS
TGCTCGGAGGAGCACTACTT+AGG 0.579363 4_2:+56769253 None:intergenic
ATTTCGTATTTCCAGCCTTG+AGG 0.579367 4_2:+56766076 None:intergenic
TTGTAAATACAAGGCTGCAG+TGG 0.581447 4_2:-56768241 Msa0609430:intron
GATGAAAGTCGTGGCACAGA+AGG 0.582134 4_2:-56766720 Msa0609430:CDS
AGCACTGACCAACAAGTACA+AGG 0.583674 4_2:-56765279 Msa0609430:CDS
AGAATATAAACTTATAGAAG+GGG 0.584502 4_2:-56766906 Msa0609430:CDS
AGACAAGGACAGAATTTGAA+GGG 0.588012 4_2:-56766973 Msa0609430:CDS
TAATCCGATCCAGCATTGCT+CGG 0.591880 4_2:+56769237 None:intergenic
ATAAACTTATAGAAGGGGAG+AGG 0.592107 4_2:-56766901 Msa0609430:CDS
CACATCTCCAACCCCTTCAG+AGG 0.594814 4_2:-56769518 Msa0609430:intron
GCTTTAACAGTTGTGAATGG+CGG 0.596409 4_2:-56769288 Msa0609430:CDS
TACCTGCAATTTCTTCTCTG+CGG 0.598092 4_2:+56767174 None:intergenic
TTTGAGTCCCCGCCAAGACA+AGG 0.599113 4_2:+56764857 None:intergenic
TGACCGGTTGAGAGAAACTC+AGG 0.600341 4_2:-56765196 Msa0609430:intron
ACACCTCGTCGTCAGACCAA+TGG 0.603841 4_2:-56764734 Msa0609430:CDS
CCTATGGTCAAACAGGATCA+GGG 0.605281 4_2:-56766198 Msa0609430:CDS
AAGCAAGGCTTGATATTGAG+AGG 0.606395 4_2:-56768197 Msa0609430:CDS
GATTCAAAGTGCAAATCAGA+AGG 0.607548 4_2:-56768130 Msa0609430:intron
CGGCCATTGGTCTGACGACG+AGG 0.613765 4_2:+56764731 None:intergenic
TATACAATGATGGGAAGACC+TGG 0.618927 4_2:-56766169 Msa0609430:CDS
GAAAGAAAAGGCTACTGCAG+AGG 0.619356 4_2:-56767873 Msa0609430:CDS
AGTAAGTTGACCCTTTAGCA+TGG 0.622488 4_2:+56767841 None:intergenic
TCCGTGTATTCTGTCGCGTG+AGG 0.624664 4_2:-56766755 Msa0609430:CDS
AGTTTGATTAATTCTAACAA+CGG 0.626558 4_2:-56764593 Msa0609430:three_prime_UTR
GCGAGTCACTATGCTCACTC+CGG 0.627787 4_2:-56764790 Msa0609430:CDS
ATTAAAAGCAAATGAACTGG+AGG 0.630590 4_2:-56767335 Msa0609430:intron
TCAATGGAAACTTCTGGACG+AGG 0.630866 4_2:-56766675 Msa0609430:CDS
ACTACTCTTTCCGAGGACCT+CGG 0.636188 4_2:-56768168 Msa0609430:CDS
AAAAGAGGGTACCTCTGAAG+GGG 0.638735 4_2:+56769507 None:intergenic
ACAAGTTTACAACAGTACAA+TGG 0.639259 4_2:-56767947 Msa0609430:CDS
TAAGCACCTGCTAGAAACAA+TGG 0.641863 4_2:-56769343 Msa0609430:CDS
AAGCAGAATCCCTCAACTGG+AGG 0.647188 4_2:+56769588 None:intergenic
GTGTGAGTGATAATGGAGGC+CGG 0.651317 4_2:+56769542 None:intergenic
CTATTGAGTAGCTCGTCTCA+AGG 0.652521 4_2:+56768627 None:intergenic
ATCATCGGATGTATCACGCG+TGG 0.653768 4_2:-56765887 Msa0609430:CDS
GTCACATACTACTCTTTCCG+AGG 0.654450 4_2:-56768175 Msa0609430:CDS
AAACAGTCTCAACAACCTCA+AGG 0.655111 4_2:-56766091 Msa0609430:CDS
AAAGACGCTCGCTACCAGCA+AGG 0.659107 4_2:+56765238 None:intergenic
TTTCTAAAGAGAGAGAAGCA+AGG 0.661679 4_2:-56768212 Msa0609430:CDS
ATGTATCTGTATTCGAGACA+AGG 0.666554 4_2:-56766988 Msa0609430:CDS
AATATTTGTTCTAACGAACG+AGG 0.684845 4_2:+56766121 None:intergenic
GCACCTGCTAGAAACAATGG+TGG 0.685189 4_2:-56769340 Msa0609430:CDS
TCCGATCCAGCATTGCTCGG+AGG 0.699371 4_2:+56769240 None:intergenic
TTGTTGCCAGATGAAAGTCG+TGG 0.713598 4_2:-56766729 Msa0609430:CDS
TCAAACGAGAGTCAGTAGCG+CGG 0.759318 4_2:+56764711 None:intergenic
GTGTGTGTGAGTGATAATGG+AGG 0.786079 4_2:+56769538 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTCCAAAATTTAAA+AGG + chr4_2:56765877-56765896 None:intergenic 10.0%
!! ATATCTTTATTAGATTAAAA+TGG - chr4_2:56768536-56768555 Msa0609430:intron 10.0%
!!! TATATATTTACTTTTTAACC+AGG - chr4_2:56765336-56765355 Msa0609430:intron 15.0%
!!! ATATATTTACTTTTTAACCA+GGG - chr4_2:56765337-56765356 Msa0609430:intron 15.0%
!! ATAAATAAATCTAGACATAT+TGG + chr4_2:56765706-56765725 None:intergenic 15.0%
!! TTGGAAAAAAATAATATGAA+AGG - chr4_2:56765885-56765904 Msa0609430:CDS 15.0%
!! AAAATATCTTTGTAAATACA+AGG - chr4_2:56765932-56765951 Msa0609430:CDS 15.0%
!! TAGTTATGATCTTATTAAAT+TGG - chr4_2:56767611-56767630 Msa0609430:intron 15.0%
!!! AACATAATTTGATATGATTT+TGG - chr4_2:56768576-56768595 Msa0609430:CDS 15.0%
!!! TTTAATTGTATTGATTATTC+TGG - chr4_2:56768658-56768677 Msa0609430:CDS 15.0%
!!! TATTTTGAAATGAGAAAAGA+GGG + chr4_2:56764692-56764711 None:intergenic 20.0%
!!! ATATTTTGAAATGAGAAAAG+AGG + chr4_2:56764693-56764712 None:intergenic 20.0%
!!! ATTAAACCTTTCTTTCTTTT+TGG + chr4_2:56765024-56765043 None:intergenic 20.0%
!! GAAAGAAAGGTTTAATTATA+AGG - chr4_2:56765028-56765047 Msa0609430:CDS 20.0%
!! AACAAAATTTCAAACTTGAA+CGG + chr4_2:56765055-56765074 None:intergenic 20.0%
!! AATATCAAGTTCAATGTATA+TGG - chr4_2:56765135-56765154 Msa0609430:intron 20.0%
!!! TAACTTGTGTTTAAATACTA+CGG + chr4_2:56765231-56765250 None:intergenic 20.0%
!! ACTTTCTTTATTCAAACTTA+AGG + chr4_2:56765257-56765276 None:intergenic 20.0%
!!! ATATCGTTTTTCTTATTCAA+AGG + chr4_2:56765448-56765467 None:intergenic 20.0%
!!! AATGTAACTCTATGTTTTTT+AGG - chr4_2:56765468-56765487 Msa0609430:CDS 20.0%
!!! ATATGGTGGATTATATAAAA+AGG - chr4_2:56765503-56765522 Msa0609430:intron 20.0%
!!! AAGCAAAAAAGTATAGAAAT+CGG - chr4_2:56765613-56765632 Msa0609430:intron 20.0%
!! TTTACAAGAGAAATTGATAA+AGG - chr4_2:56765809-56765828 Msa0609430:CDS 20.0%
!!! TTTTCAAAGCTTATTATGAT+TGG + chr4_2:56765916-56765935 None:intergenic 20.0%
!! TTAATTATTGTCTTCATTGA+TGG - chr4_2:56766157-56766176 Msa0609430:CDS 20.0%
!! TCAATTAAGTTCAATAACTT+AGG + chr4_2:56766562-56766581 None:intergenic 20.0%
!! AAGGAAATTGAATAATATAC+CGG + chr4_2:56766625-56766644 None:intergenic 20.0%
!! ATATTTAATAGAAGGAAATC+AGG + chr4_2:56766885-56766904 None:intergenic 20.0%
!! ATAGTGTGATATTTAATAGA+AGG + chr4_2:56766893-56766912 None:intergenic 20.0%
!! ATTGAAAGAGAATCAAATAA+AGG - chr4_2:56766964-56766983 Msa0609430:CDS 20.0%
!!! CAACATGATAATGATAATAA+TGG + chr4_2:56767143-56767162 None:intergenic 20.0%
!! TCAGAATATAAACTTATAGA+AGG - chr4_2:56767274-56767293 Msa0609430:intron 20.0%
!! CAGAATATAAACTTATAGAA+GGG - chr4_2:56767275-56767294 Msa0609430:intron 20.0%
!! AGAATATAAACTTATAGAAG+GGG - chr4_2:56767276-56767295 Msa0609430:intron 20.0%
!!! AAAATTACACAATACCATTT+TGG - chr4_2:56767312-56767331 Msa0609430:intron 20.0%
!! CTTATAATCAACAAATCTTT+CGG + chr4_2:56767350-56767369 None:intergenic 20.0%
!! AAAACTGAGATTGTTTAATA+AGG + chr4_2:56767386-56767405 None:intergenic 20.0%
!! TATTTCAGAATAAATCCAAA+TGG + chr4_2:56767934-56767953 None:intergenic 20.0%
!!! GTTCTTGTTATAAAATTTTC+AGG - chr4_2:56768214-56768233 Msa0609430:CDS 20.0%
!!! ATCGAATTCTAGTTATAAAA+TGG + chr4_2:56768497-56768516 None:intergenic 20.0%
!! TTCATTTATCATTTGTAATC+AGG - chr4_2:56769075-56769094 Msa0609430:intron 20.0%
!! AGTTTGATTAATTCTAACAA+CGG - chr4_2:56769589-56769608 Msa0609430:intron 20.0%
!! AACAAATTGAACTATTAGAA+TGG + chr4_2:56769663-56769682 None:intergenic 20.0%
!! TTCTCTTGTATAAATTGAAA+AGG - chr4_2:56769718-56769737 Msa0609430:five_prime_UTR 20.0%
!! ATTCACCTCATTTTAAATTC+TGG - chr4_2:56764724-56764743 Msa0609430:CDS 25.0%
!! TTCACCTCATTTTAAATTCT+GGG - chr4_2:56764725-56764744 Msa0609430:CDS 25.0%
!! ATTGAAGTTTCAGAATTTTG+TGG - chr4_2:56764812-56764831 Msa0609430:CDS 25.0%
!! TTGAAGTTTCAGAATTTTGT+GGG - chr4_2:56764813-56764832 Msa0609430:CDS 25.0%
! AAAAAGCCAAAAAGAAAGAA+AGG - chr4_2:56765015-56765034 Msa0609430:CDS 25.0%
! TTAGGAAAGATGTGAAAATA+TGG - chr4_2:56765486-56765505 Msa0609430:CDS 25.0%
! GGATTATATAAAAAGGCTTA+AGG - chr4_2:56765510-56765529 Msa0609430:intron 25.0%
!!! GATTTCTATACTTTTTTGCT+TGG + chr4_2:56765614-56765633 None:intergenic 25.0%
!! GTCTTTTGCCTTTTAAATTT+TGG - chr4_2:56765866-56765885 Msa0609430:CDS 25.0%
!! ATTGGAATTCAAGTTAGAAT+AGG - chr4_2:56766405-56766424 Msa0609430:intron 25.0%
! GGTATATTATTCAATTTCCT+TGG - chr4_2:56766624-56766643 Msa0609430:intron 25.0%
! TCATGAAACTAAAAGAATCT+AGG - chr4_2:56766792-56766811 Msa0609430:intron 25.0%
! CATGAAACTAAAAGAATCTA+GGG - chr4_2:56766793-56766812 Msa0609430:intron 25.0%
! TTTATTATTAGAGTCATGAC+AGG - chr4_2:56766913-56766932 Msa0609430:CDS 25.0%
! TATCTTACAAAAAACACAAG+TGG + chr4_2:56767083-56767102 None:intergenic 25.0%
! AATTGCATATGTTTCTTGTT+AGG - chr4_2:56767165-56767184 Msa0609430:intron 25.0%
!!! TAAACAATCTCAGTTTTAAC+AGG - chr4_2:56767389-56767408 Msa0609430:CDS 25.0%
!!! AGTTTTAACAGGAGTTAAAA+GGG - chr4_2:56767400-56767419 Msa0609430:CDS 25.0%
! ATTCAGTTATCCATTATCAA+TGG - chr4_2:56767491-56767510 Msa0609430:CDS 25.0%
! CAAATTTAAAAGAATGCTTC+TGG + chr4_2:56767668-56767687 None:intergenic 25.0%
!!! TCATTTTTCACATTTTTCCT+TGG - chr4_2:56767807-56767826 Msa0609430:intron 25.0%
! ATCTATCAATGCTACATATA+AGG - chr4_2:56767845-56767864 Msa0609430:CDS 25.0%
! TACATTACAATGCAATAATG+AGG + chr4_2:56768166-56768185 None:intergenic 25.0%
!! TTTTATAACAAGAACCATCT+CGG + chr4_2:56768209-56768228 None:intergenic 25.0%
! TTAGATTAAAATGGACAAAC+TGG - chr4_2:56768545-56768564 Msa0609430:intron 25.0%
! TTATGATTATGGAAGATTGA+GGG + chr4_2:56768839-56768858 None:intergenic 25.0%
! ATCTTCCATAATCATAACAA+TGG - chr4_2:56768842-56768861 Msa0609430:intron 25.0%
! GGAAAAAAAAAAAAACACTG+TGG + chr4_2:56769021-56769040 None:intergenic 25.0%
! TGAAATAAAATAAGCACAGA+TGG + chr4_2:56769042-56769061 None:intergenic 25.0%
!! GATGATTATTTCTTTGTCAT+TGG - chr4_2:56769250-56769269 Msa0609430:CDS 25.0%
!!! ACTCGTTTTCATTTTTATTG+TGG + chr4_2:56769572-56769591 None:intergenic 25.0%
TGGTTACCAAAATTCAAAAC+CGG - chr4_2:56764621-56764640 Msa0609430:three_prime_UTR 30.0%
! ACATCCCAGAATTTAAAATG+AGG + chr4_2:56764732-56764751 None:intergenic 30.0%
! TGCCTTATTCTTCCATTAAT+CGG + chr4_2:56764873-56764892 None:intergenic 30.0%
CATGTAGTATTCTTGTAAAC+TGG - chr4_2:56765204-56765223 Msa0609430:CDS 30.0%
GGAAAAGTTAAAGAATTCAC+TGG - chr4_2:56765582-56765601 Msa0609430:intron 30.0%
!! TTTACCGATTTACTTCACTT+CGG - chr4_2:56765644-56765663 Msa0609430:intron 30.0%
GAAGAAGAAAAAAAGTGGAA+AGG + chr4_2:56766111-56766130 None:intergenic 30.0%
GATTGGAAGAAGAAAAAAAG+TGG + chr4_2:56766116-56766135 None:intergenic 30.0%
AGTTTAATTCCTGCAATGAT+TGG + chr4_2:56766133-56766152 None:intergenic 30.0%
ACAAGTTTACAACAGTACAA+TGG - chr4_2:56766235-56766254 Msa0609430:intron 30.0%
! CACATGTGATTCTTTTCAAT+TGG - chr4_2:56766387-56766406 Msa0609430:intron 30.0%
ACTCATTCTTTATCTTCTTC+TGG - chr4_2:56766437-56766456 Msa0609430:CDS 30.0%
CTCATTCTTTATCTTCTTCT+GGG - chr4_2:56766438-56766457 Msa0609430:CDS 30.0%
GAAGACTATTAAAAGAACCA+AGG + chr4_2:56766644-56766663 None:intergenic 30.0%
TTAATAGTCTTCTCAAGAAG+AGG - chr4_2:56766652-56766671 Msa0609430:intron 30.0%
AGTGAAGTTTATTCTATGAG+AGG - chr4_2:56766701-56766720 Msa0609430:CDS 30.0%
GACATTAAAAGCAAATGAAC+TGG - chr4_2:56766844-56766863 Msa0609430:intron 30.0%
ATTAAAAGCAAATGAACTGG+AGG - chr4_2:56766847-56766866 Msa0609430:intron 30.0%
ATATAGAACCATAACAGCTT+AGG - chr4_2:56767100-56767119 Msa0609430:intron 30.0%
ATAACTATCCTAAGCTGTTA+TGG + chr4_2:56767111-56767130 None:intergenic 30.0%
GGTTCAATGAATTACCAAAA+TGG + chr4_2:56767329-56767348 None:intergenic 30.0%
!! CAGTTTTAACAGGAGTTAAA+AGG - chr4_2:56767399-56767418 Msa0609430:CDS 30.0%
! CACAAGAGATATACCATTTT+GGG + chr4_2:56767544-56767563 None:intergenic 30.0%
! TCACAAGAGATATACCATTT+TGG + chr4_2:56767545-56767564 None:intergenic 30.0%
!!! GTGACTCCTATTTTGTTTTT+AGG - chr4_2:56767642-56767661 Msa0609430:intron 30.0%
TTCTGGCCTAAAAACAAAAT+AGG + chr4_2:56767651-56767670 None:intergenic 30.0%
! CATTTTTCCTTGGATTTCTT+TGG - chr4_2:56767817-56767836 Msa0609430:intron 30.0%
AATATTTGTTCTAACGAACG+AGG + chr4_2:56768064-56768083 None:intergenic 30.0%
!!! AAATTTTCAGGTGTCAATGT+TGG - chr4_2:56768226-56768245 Msa0609430:CDS 30.0%
TGTAGATAATAAATCGCGAA+TGG + chr4_2:56768267-56768286 None:intergenic 30.0%
ATCTACAAACAGATCATCAT+CGG - chr4_2:56768280-56768299 Msa0609430:intron 30.0%
ACAATCAAACATGACGTAAA+TGG - chr4_2:56768344-56768363 Msa0609430:intron 30.0%
!! ATTTTGGTGCAACAAAATGT+TGG - chr4_2:56768592-56768611 Msa0609430:CDS 30.0%
TCGAATATATGGTGTAAATG+AGG - chr4_2:56768755-56768774 Msa0609430:intron 30.0%
TATGATTATGGAAGATTGAG+GGG + chr4_2:56768838-56768857 None:intergenic 30.0%
GTTATGATTATGGAAGATTG+AGG + chr4_2:56768840-56768859 None:intergenic 30.0%
GTAATTATCATTCTCTCACA+TGG - chr4_2:56769202-56769221 Msa0609430:CDS 30.0%
ATGATACTGCAATGAAACAG+AGG + chr4_2:56764762-56764781 None:intergenic 35.0%
CTCCGATTAATGGAAGAATA+AGG - chr4_2:56764868-56764887 Msa0609430:intron 35.0%
! CAAGCTTTAACAGTTGTGAA+TGG - chr4_2:56764891-56764910 Msa0609430:intron 35.0%
GCTCATAGTTTACTCATAAG+TGG - chr4_2:56765180-56765199 Msa0609430:intron 35.0%
GGAAAGATGTGAAAATATGG+TGG - chr4_2:56765489-56765508 Msa0609430:CDS 35.0%
! TTTCTAAAGAGAGAGAAGCA+AGG - chr4_2:56765970-56765989 Msa0609430:intron 35.0%
GATTCAAAGTGCAAATCAGA+AGG - chr4_2:56766052-56766071 Msa0609430:intron 35.0%
TTTCTTCTTCCAATCATTGC+AGG - chr4_2:56766121-56766140 Msa0609430:CDS 35.0%
CTTATACATTTCATTGAGCG+AGG + chr4_2:56766197-56766216 None:intergenic 35.0%
CGCTCAATGAAATGTATAAG+CGG - chr4_2:56766197-56766216 Msa0609430:CDS 35.0%
CAAACGTGTAGAGAAAGAAA+AGG - chr4_2:56766297-56766316 Msa0609430:intron 35.0%
TGTGAAAGCAGAACTTACAA+TGG + chr4_2:56766371-56766390 None:intergenic 35.0%
TCATTTCGTATTCATGCAAC+CGG - chr4_2:56766603-56766622 Msa0609430:intron 35.0%
TTTGCGCTTGAGATAATTGA+CGG + chr4_2:56766757-56766776 None:intergenic 35.0%
ACAAAATTGTTGCGTGCTAT+TGG - chr4_2:56767048-56767067 Msa0609430:intron 35.0%
ATGTATCTGTATTCGAGACA+AGG - chr4_2:56767194-56767213 Msa0609430:CDS 35.0%
AGACAAGGACAGAATTTGAA+GGG - chr4_2:56767209-56767228 Msa0609430:CDS 35.0%
ATAAACTTATAGAAGGGGAG+AGG - chr4_2:56767281-56767300 Msa0609430:intron 35.0%
CCAGAAGTTTCCATTGATAA+TGG + chr4_2:56767504-56767523 None:intergenic 35.0%
CCATTATCAATGGAAACTTC+TGG - chr4_2:56767501-56767520 Msa0609430:CDS 35.0%
! AAGTGCTCTTGATGGTTATA+AGG - chr4_2:56767752-56767771 Msa0609430:intron 35.0%
ATCAGAACCAAAGAAATCCA+AGG + chr4_2:56767827-56767846 None:intergenic 35.0%
ACACATACACATCAACCATT+TGG - chr4_2:56767916-56767935 Msa0609430:CDS 35.0%
AGGGAAAACCTATACAATGA+TGG - chr4_2:56768003-56768022 Msa0609430:intron 35.0%
GGGAAAACCTATACAATGAT+GGG - chr4_2:56768004-56768023 Msa0609430:intron 35.0%
ATACGAAATGCAGGTAACAT+TGG - chr4_2:56768120-56768139 Msa0609430:intron 35.0%
! TTTTTGAACATGATCCGAGA+TGG - chr4_2:56768192-56768211 Msa0609430:CDS 35.0%
TTGATTGTGTATTGCTTTCC+AGG + chr4_2:56768332-56768351 None:intergenic 35.0%
! TGTTTCTGATCTTACAGTAG+TGG - chr4_2:56768376-56768395 Msa0609430:CDS 35.0%
TAAATCAAGCTGCAAATAGC+AGG - chr4_2:56768432-56768451 Msa0609430:CDS 35.0%
! TTTTTGCCTCTTAGATCTGT+GGG - chr4_2:56768681-56768700 Msa0609430:CDS 35.0%
GTGTTCACTCTTCGAATATA+TGG - chr4_2:56768744-56768763 Msa0609430:intron 35.0%
GCATGCCATTGTTATGATTA+TGG + chr4_2:56768850-56768869 None:intergenic 35.0%
CTCTGGCAGAGAAATAAATT+AGG + chr4_2:56768885-56768904 None:intergenic 35.0%
! ATGATTAAACAGCCTTGTCT+TGG - chr4_2:56769313-56769332 Msa0609430:CDS 35.0%
! CATTTACTCTAGAAGCAAAC+CGG + chr4_2:56769414-56769433 None:intergenic 35.0%
AGAGTAAATGCTTGTGAGAT+TGG - chr4_2:56769424-56769443 Msa0609430:intron 35.0%
TTGAGGGATTCTGCTTCAAA+TGG - chr4_2:56764601-56764620 Msa0609430:three_prime_UTR 40.0%
GATGTGTGTGTGAGTGATAA+TGG + chr4_2:56764650-56764669 None:intergenic 40.0%
TAAGCACCTGCTAGAAACAA+TGG - chr4_2:56764839-56764858 Msa0609430:CDS 40.0%
GCTTTAACAGTTGTGAATGG+CGG - chr4_2:56764894-56764913 Msa0609430:intron 40.0%
CTTTAACAGTTGTGAATGGC+GGG - chr4_2:56764895-56764914 Msa0609430:intron 40.0%
GATCTGAGTAATCAAGCAGT+AGG + chr4_2:56765405-56765424 None:intergenic 40.0%
GGCTTAAGGTTTGTATCAGA+TGG - chr4_2:56765524-56765543 Msa0609430:intron 40.0%
GCAAGCAATAGCATTCATCA+CGG + chr4_2:56765671-56765690 None:intergenic 40.0%
AGAGATGCTGCTCAAAATCA+AGG - chr4_2:56765737-56765756 Msa0609430:intron 40.0%
AAAGGAAGAAGCAGAGAAGT+CGG - chr4_2:56765827-56765846 Msa0609430:CDS 40.0%
TTGTAAATACAAGGCTGCAG+TGG - chr4_2:56765941-56765960 Msa0609430:CDS 40.0%
AAGCAAGGCTTGATATTGAG+AGG - chr4_2:56765985-56766004 Msa0609430:intron 40.0%
! AGTAAGTTGACCCTTTAGCA+TGG + chr4_2:56766344-56766363 None:intergenic 40.0%
AAGATCATCCTTCTGCTTTG+TGG + chr4_2:56766678-56766697 None:intergenic 40.0%
GGAGAACTCTTGCATTGAAT+TGG - chr4_2:56766814-56766833 Msa0609430:intron 40.0%
AAAGCAAATGAACTGGAGGT+TGG - chr4_2:56766851-56766870 Msa0609430:intron 40.0%
TACCTGCAATTTCTTCTCTG+CGG + chr4_2:56767011-56767030 None:intergenic 40.0%
GAGACAAGGACAGAATTTGA+AGG - chr4_2:56767208-56767227 Msa0609430:CDS 40.0%
! GAGATATACCATTTTGGGCT+AGG + chr4_2:56767539-56767558 None:intergenic 40.0%
! CTTGTACAAAGTGCTCTTGA+TGG - chr4_2:56767744-56767763 Msa0609430:intron 40.0%
TAGGTTTGCATCTTTGCCTA+TGG - chr4_2:56767968-56767987 Msa0609430:CDS 40.0%
ATCTTTGCCTATGGTCAAAC+AGG - chr4_2:56767977-56767996 Msa0609430:CDS 40.0%
AGGTCTTCCCATCATTGTAT+AGG + chr4_2:56768014-56768033 None:intergenic 40.0%
! TATACAATGATGGGAAGACC+TGG - chr4_2:56768013-56768032 Msa0609430:intron 40.0%
CTGGACATCCTGATGAAAAA+GGG - chr4_2:56768032-56768051 Msa0609430:intron 40.0%
!! GGTATCAACCCTTTTTCATC+AGG + chr4_2:56768043-56768062 None:intergenic 40.0%
AAACAGTCTCAACAACCTCA+AGG - chr4_2:56768091-56768110 Msa0609430:intron 40.0%
ATTTCGTATTTCCAGCCTTG+AGG + chr4_2:56768109-56768128 None:intergenic 40.0%
! GTTTTTGCCTCTTAGATCTG+TGG - chr4_2:56768680-56768699 Msa0609430:CDS 40.0%
! GTTTTTCCCACAGATCTAAG+AGG + chr4_2:56768690-56768709 None:intergenic 40.0%
TCAGAACACCTTGTACTTGT+TGG + chr4_2:56768914-56768933 None:intergenic 40.0%
CTGAATCTAATTGACCTTGC+TGG - chr4_2:56768930-56768949 Msa0609430:intron 40.0%
CTTTCAAAGAGTGGTTCAAC+CGG - chr4_2:56768963-56768982 Msa0609430:intron 40.0%
ATACCTGAGTTTCTCTCAAC+CGG + chr4_2:56768992-56769011 None:intergenic 40.0%
GAGTGATGTCATATTTGCCT+TGG - chr4_2:56769123-56769142 Msa0609430:intron 40.0%
!! GTAAGCTTTGAGTTCCTGAA+TGG + chr4_2:56769169-56769188 None:intergenic 40.0%
! ATTAAACAGCCTTGTCTTGG+CGG - chr4_2:56769316-56769335 Msa0609430:CDS 40.0%
CATATCACCTGATCCTTCTT+CGG - chr4_2:56769366-56769385 Msa0609430:CDS 40.0%
ATGCACTTGACTGCTACAAA+TGG + chr4_2:56769540-56769559 None:intergenic 40.0%
TTGAAGCAGAATCCCTCAAC+TGG + chr4_2:56764600-56764619 None:intergenic 45.0%
!!! TGGAGGCCGGTTTTGAATTT+TGG + chr4_2:56764630-56764649 None:intergenic 45.0%
!! GTGTGTGTGAGTGATAATGG+AGG + chr4_2:56764647-56764666 None:intergenic 45.0%
!! AAAAGAGGGTACCTCTGAAG+GGG + chr4_2:56764678-56764697 None:intergenic 45.0%
!! GAAAAGAGGGTACCTCTGAA+GGG + chr4_2:56764679-56764698 None:intergenic 45.0%
!! AGAAAAGAGGGTACCTCTGA+AGG + chr4_2:56764680-56764699 None:intergenic 45.0%
!! TCTCCACCATTGTTTCTAGC+AGG + chr4_2:56764848-56764867 None:intergenic 45.0%
! ATGGTGGAGACTCCGATTAA+TGG - chr4_2:56764858-56764877 Msa0609430:CDS 45.0%
TAATCCGATCCAGCATTGCT+CGG + chr4_2:56764948-56764967 None:intergenic 45.0%
AGCAATGCTGGATCGGATTA+TGG - chr4_2:56764948-56764967 Msa0609430:intron 45.0%
ATCTGTTAGAACAGCAACCC+TGG + chr4_2:56765357-56765376 None:intergenic 45.0%
CTATTGAGTAGCTCGTCTCA+AGG + chr4_2:56765558-56765577 None:intergenic 45.0%
GACGAGCTACTCAATAGATC+AGG - chr4_2:56765561-56765580 Msa0609430:intron 45.0%
CGGTCCGAAGTGAAGTAAAT+CGG + chr4_2:56765651-56765670 None:intergenic 45.0%
GCTGCTCAAAATCAAGGAAG+AGG - chr4_2:56765743-56765762 Msa0609430:intron 45.0%
GTCACATACTACTCTTTCCG+AGG - chr4_2:56766007-56766026 Msa0609430:intron 45.0%
GAAAGAAAAGGCTACTGCAG+AGG - chr4_2:56766309-56766328 Msa0609430:intron 45.0%
GAGAACATCGCCATGCTAAA+GGG - chr4_2:56766331-56766350 Msa0609430:intron 45.0%
CGACTTTCATCTGGCAACAA+AGG + chr4_2:56767453-56767472 None:intergenic 45.0%
TTGTTGCCAGATGAAAGTCG+TGG - chr4_2:56767453-56767472 Msa0609430:CDS 45.0%
TCAATGGAAACTTCTGGACG+AGG - chr4_2:56767507-56767526 Msa0609430:CDS 45.0%
GGAATTGACCTAGCCCAAAA+TGG - chr4_2:56767528-56767547 Msa0609430:intron 45.0%
GCTACATATAAGGCACGTCT+TGG - chr4_2:56767855-56767874 Msa0609430:CDS 45.0%
CCTATGGTCAAACAGGATCA+GGG - chr4_2:56767984-56768003 Msa0609430:CDS 45.0%
!! CCTTTTTCATCAGGATGTCC+AGG + chr4_2:56768034-56768053 None:intergenic 45.0%
CCTGGACATCCTGATGAAAA+AGG - chr4_2:56768031-56768050 Msa0609430:intron 45.0%
AGGCTGGAAATACGAAATGC+AGG - chr4_2:56768111-56768130 Msa0609430:intron 45.0%
GATGTATCACGCGTGGAAAA+TGG - chr4_2:56768302-56768321 Msa0609430:intron 45.0%
!! AGCACTGACCAACAAGTACA+AGG - chr4_2:56768903-56768922 Msa0609430:intron 45.0%
CATATTTGCCTTGGCCAAGA+AGG - chr4_2:56769132-56769151 Msa0609430:intron 45.0%
ATGATCTTCCTTCTTGGCCA+AGG + chr4_2:56769143-56769162 None:intergenic 45.0%
TGGCACATGATCTTCCTTCT+TGG + chr4_2:56769149-56769168 None:intergenic 45.0%
! AGGAAGATCATGTGCCATTC+AGG - chr4_2:56769152-56769171 Msa0609430:intron 45.0%
! TTAAACAGCCTTGTCTTGGC+GGG - chr4_2:56769317-56769336 Msa0609430:CDS 45.0%
!!! ATATTTGAATTTAAAATTAA+AGG - chr4_2:56765108-56765127 Msa0609430:intron 5.0%
AGCAGAATCCCTCAACTGGA+GGG + chr4_2:56764596-56764615 None:intergenic 50.0%
AAGCAGAATCCCTCAACTGG+AGG + chr4_2:56764597-56764616 None:intergenic 50.0%
!! GTGTGAGTGATAATGGAGGC+CGG + chr4_2:56764643-56764662 None:intergenic 50.0%
GCACCTGCTAGAAACAATGG+TGG - chr4_2:56764842-56764861 Msa0609430:CDS 50.0%
AGTAGCTCGTCTCAAGGTCT+TGG + chr4_2:56765552-56765571 None:intergenic 50.0%
ACTACTCTTTCCGAGGACCT+CGG - chr4_2:56766014-56766033 Msa0609430:intron 50.0%
! TTCAGCTTTTCCGAGGTCCT+CGG + chr4_2:56766027-56766046 None:intergenic 50.0%
! TCTCTCGTTCAGCTTTTCCG+AGG + chr4_2:56766034-56766053 None:intergenic 50.0%
GGAGAACATCGCCATGCTAA+AGG - chr4_2:56766330-56766349 Msa0609430:intron 50.0%
AGAAGAGGCCACAAAGCAGA+AGG - chr4_2:56766667-56766686 Msa0609430:CDS 50.0%
ACAGGACGAGTTTCTTTCGC+AGG - chr4_2:56766931-56766950 Msa0609430:CDS 50.0%
AGCCGCAGAGAAGAAATTGC+AGG - chr4_2:56767006-56767025 Msa0609430:intron 50.0%
TTATAGAAGGGGAGAGGCTG+CGG - chr4_2:56767287-56767306 Msa0609430:intron 50.0%
TCTGTGCCACGACTTTCATC+TGG + chr4_2:56767462-56767481 None:intergenic 50.0%
GATGAAAGTCGTGGCACAGA+AGG - chr4_2:56767462-56767481 Msa0609430:CDS 50.0%
GCCTATGGTCAAACAGGATC+AGG - chr4_2:56767983-56768002 Msa0609430:CDS 50.0%
CCCTGATCCTGTTTGACCAT+AGG + chr4_2:56767987-56768006 None:intergenic 50.0%
AGTCTCAACAACCTCAAGGC+TGG - chr4_2:56768095-56768114 Msa0609430:intron 50.0%
ATCATCGGATGTATCACGCG+TGG - chr4_2:56768295-56768314 Msa0609430:intron 50.0%
! GTACTTGTTGGTCAGTGCTC+TGG + chr4_2:56768902-56768921 None:intergenic 50.0%
AGCGAGCGTCTTTCAAAGAG+TGG - chr4_2:56768954-56768973 Msa0609430:intron 50.0%
AGTTTCTCTCAACCGGTCAC+CGG + chr4_2:56768985-56769004 None:intergenic 50.0%
TGACCGGTTGAGAGAAACTC+AGG - chr4_2:56768986-56769005 Msa0609430:intron 50.0%
! TAAACAGCCTTGTCTTGGCG+GGG - chr4_2:56769318-56769337 Msa0609430:CDS 50.0%
TCACCTGATCCTTCTTCGGT+TGG - chr4_2:56769370-56769389 Msa0609430:intron 50.0%
TCAAACGAGAGTCAGTAGCG+CGG + chr4_2:56769474-56769493 None:intergenic 50.0%
CACATCTCCAACCCCTTCAG+AGG - chr4_2:56764664-56764683 Msa0609430:three_prime_UTR 55.0%
!! TGCTCGGAGGAGCACTACTT+AGG + chr4_2:56764932-56764951 None:intergenic 55.0%
TCCTCCGAGCAATGCTGGAT+CGG - chr4_2:56764941-56764960 Msa0609430:intron 55.0%
TCCGTGTATTCTGTCGCGTG+AGG - chr4_2:56767427-56767446 Msa0609430:CDS 55.0%
GCCTCACGCGACAGAATACA+CGG + chr4_2:56767431-56767450 None:intergenic 55.0%
CGCGTGGAAAATGGTACTCC+TGG - chr4_2:56768311-56768330 Msa0609430:intron 55.0%
AAAGACGCTCGCTACCAGCA+AGG + chr4_2:56768947-56768966 None:intergenic 55.0%
AGAGTGGTTCAACCGGTGAC+CGG - chr4_2:56768970-56768989 Msa0609430:intron 55.0%
TTTGAGTCCCCGCCAAGACA+AGG + chr4_2:56769328-56769347 None:intergenic 55.0%
TCGCCAACCGAAGAAGGATC+AGG + chr4_2:56769376-56769395 None:intergenic 55.0%
AGTGACTCGCCAACCGAAGA+AGG + chr4_2:56769382-56769401 None:intergenic 55.0%
GCGAGTCACTATGCTCACTC+CGG - chr4_2:56769392-56769411 Msa0609430:intron 55.0%
ACACCTCGTCGTCAGACCAA+TGG - chr4_2:56769448-56769467 Msa0609430:intron 55.0%
TCCCTCTCTCCCTCCAGTTG+AGG - chr4_2:56764584-56764603 Msa0609430:three_prime_UTR 60.0%
CCCTCAACTGGAGGGAGAGA+GGG + chr4_2:56764588-56764607 None:intergenic 60.0%
CCCTCTCTCCCTCCAGTTGA+GGG - chr4_2:56764585-56764604 Msa0609430:three_prime_UTR 60.0%
TCCCTCAACTGGAGGGAGAG+AGG + chr4_2:56764589-56764608 None:intergenic 60.0%
!! GAGGGTACCTCTGAAGGGGT+TGG + chr4_2:56764674-56764693 None:intergenic 60.0%
!! GTGAATGGCGGGCACGATGT+TGG - chr4_2:56764906-56764925 Msa0609430:intron 60.0%
AGTGCTCCTCCGAGCAATGC+TGG - chr4_2:56764936-56764955 Msa0609430:intron 60.0%
TCCGATCCAGCATTGCTCGG+AGG + chr4_2:56764945-56764964 None:intergenic 60.0%
AGAGTCAGTAGCGCGGCCAT+TGG + chr4_2:56769467-56769486 None:intergenic 60.0%
! CGGCCATTGGTCTGACGACG+AGG + chr4_2:56769454-56769473 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 56764455 56769749 56764455 ID=Msa0609430;Name=Msa0609430
chr4_2 mRNA 56764455 56769749 56764455 ID=Msa0609430-mRNA-1;Parent=Msa0609430;Name=Msa0609430-mRNA-1;_AED=0.14;_eAED=0.14;_QI=59|1|1|1|0.88|0.83|18|245|795
chr4_2 exon 56764455 56764879 56764455 ID=Msa0609430-mRNA-1:exon:14712;Parent=Msa0609430-mRNA-1
chr4_2 exon 56765003 56765107 56765003 ID=Msa0609430-mRNA-1:exon:14711;Parent=Msa0609430-mRNA-1
chr4_2 exon 56765197 56765301 56765197 ID=Msa0609430-mRNA-1:exon:14710;Parent=Msa0609430-mRNA-1
chr4_2 exon 56765428 56765509 56765428 ID=Msa0609430-mRNA-1:exon:14709;Parent=Msa0609430-mRNA-1
chr4_2 exon 56765751 56765968 56765751 ID=Msa0609430-mRNA-1:exon:14708;Parent=Msa0609430-mRNA-1
chr4_2 exon 56766072 56766233 56766072 ID=Msa0609430-mRNA-1:exon:14707;Parent=Msa0609430-mRNA-1
chr4_2 exon 56766431 56766540 56766431 ID=Msa0609430-mRNA-1:exon:14706;Parent=Msa0609430-mRNA-1
chr4_2 exon 56766655 56766793 56766655 ID=Msa0609430-mRNA-1:exon:14705;Parent=Msa0609430-mRNA-1
chr4_2 exon 56766871 56767017 56766871 ID=Msa0609430-mRNA-1:exon:14704;Parent=Msa0609430-mRNA-1
chr4_2 exon 56767177 56767251 56767177 ID=Msa0609430-mRNA-1:exon:14703;Parent=Msa0609430-mRNA-1
chr4_2 exon 56767336 56767545 56767336 ID=Msa0609430-mRNA-1:exon:14702;Parent=Msa0609430-mRNA-1
chr4_2 exon 56767832 56768014 56767832 ID=Msa0609430-mRNA-1:exon:14701;Parent=Msa0609430-mRNA-1
chr4_2 exon 56768131 56768250 56768131 ID=Msa0609430-mRNA-1:exon:14700;Parent=Msa0609430-mRNA-1
chr4_2 exon 56768356 56768465 56768356 ID=Msa0609430-mRNA-1:exon:14699;Parent=Msa0609430-mRNA-1
chr4_2 exon 56768570 56768714 56768570 ID=Msa0609430-mRNA-1:exon:14698;Parent=Msa0609430-mRNA-1
chr4_2 exon 56769155 56769385 56769155 ID=Msa0609430-mRNA-1:exon:14697;Parent=Msa0609430-mRNA-1
chr4_2 exon 56769519 56769607 56769519 ID=Msa0609430-mRNA-1:exon:14696;Parent=Msa0609430-mRNA-1
chr4_2 exon 56769714 56769749 56769714 ID=Msa0609430-mRNA-1:exon:14695;Parent=Msa0609430-mRNA-1
chr4_2 five_prime_UTR 56769714 56769749 56769714 ID=Msa0609430-mRNA-1:five_prime_utr;Parent=Msa0609430-mRNA-1
chr4_2 five_prime_UTR 56769585 56769607 56769585 ID=Msa0609430-mRNA-1:five_prime_utr;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56769519 56769584 56769519 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56769155 56769385 56769155 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56768570 56768714 56768570 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56768356 56768465 56768356 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56768131 56768250 56768131 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56767832 56768014 56767832 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56767336 56767545 56767336 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56767177 56767251 56767177 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56766871 56767017 56766871 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56766655 56766793 56766655 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56766431 56766540 56766431 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56766072 56766233 56766072 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56765751 56765968 56765751 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56765428 56765509 56765428 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56765197 56765301 56765197 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56765003 56765107 56765003 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 CDS 56764700 56764879 56764700 ID=Msa0609430-mRNA-1:cds;Parent=Msa0609430-mRNA-1
chr4_2 three_prime_UTR 56764455 56764699 56764455 ID=Msa0609430-mRNA-1:three_prime_utr;Parent=Msa0609430-mRNA-1
Gene Sequence

>Msa0609430

ATGGTTACCAAAATTCAAAACCGGCCTCCATTATCACTCACACACACATCTCCAACCCCTTCAGAGTTTCAGAATTTTGTGGGAGATAAGCACCTGCTAGAAACAATGGTGGAGACTCCGATTAATGGAAGAATAAGGCAAGCTTTAACAGTTGTGAATGGCGGGCACGATGTTGGCCTAAGTAGTGCTCCTCCGAGCAATGCTGGATCGGATTATGGTGTAATAGAGTTTACAAGAGAAGATGTAGAAGCATTGCTAAATGAAAAAGCCAAAAAGAAAGAAAGGTTTAATTATAAGGAAAGATGTGAAAATATGGTGGATTATATAAAAAGGCTTAAGGTTTGTATCAGATGGTTCCAAGACCTTGAGACGAGCTACTCAATAGATCAGGAAAAGTTAAAGAATTCACTGGAAATGACCAAGCAAAAAAGTATAGAAATCGAGATGCTGCTCAAAATCAAGGAAGAGGAGTTGAATTTAATTATTATAGAAATGAGAAAGAATTGCACTTCTTTACAAGAGAAATTGATAAAGGAAGAAGCAGAGAAGTCGGCTGCAGTGGAATCTCTTTCTAAAGAGAGAGAAGCAAGGCTTGATATTGAGAGGTCACATACTACTCTTTCCGAGGACCTCGGAAAAGCTGAACGAGAGATTCAAAGTGCAAATCAGAAGATATCCTCGCTCAATGAAATGTATAAGCGGTTACAAGAATACATAACAAGTTTACAACAGTACAATGGAAAACTTCATACTGAGCTTTCATCAGTTGAAGATGAACTCAAACGTGTAGAGAAAGAAAAGGCTACTGCAGAGGAGAACATCGCCATGCTAAAGGGTCAACTTACTTTATCCATTTCTTCTCAAGAAGAGGCCACAAAGCAGAAGGATGATCTTGCTAGTGAAGTTTATTCTATGAGAGGAGAGTTGAAACAAGTAAGAGATGATAGAGACCGTCAATTATCTCAAGCGCAAAGTTTAAATGCTGAGTTCATGAAACTAAAAGAATCTAGGGAGAACTCTTGCATTGAATTGGACAGCTTGACATTAAAAGCAAATGAACTGGAGGAAAAAAGTTCATTGAAAGAGAATCAAATAAAGGCATTGCAAGAAAAGTTAGCAGCCGCAGAGAAGAAATTGCAGGTGACTGATGTATCTGTATTCGAGACAAGGACAGAATTTGAAGGGCAACAAAAACTTGTTGACGAGTTGCAAAAACGCTTAGAAGATTCAGAATATAAACTTATAGAAGGGGAGAGGCTGCGGAAAAAATTACACAATACCATTTTGGAGTTAAAAGGGAACATCCGTGTATTCTGTCGCGTGAGGCCTTTGTTGCCAGATGAAAGTCGTGGCACAGAAGGCAAGATATTCAGTTATCCATTATCAATGGAAACTTCTGGACGAGGAATTGACCTAGCCCAAAATGGCCAGAAGCATTCTTTTAAATTTGATAAAGTTTTTATACAAGACGTATCACAAGAAGAAGTGTTTGTAGAAGTTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTTTGCATCTTTGCCTATGGTCAAACAGGATCAGGGAAAACCTATACAATGATGGGAAGACCTGGACATCCTGATGAAAAAGGGTTGATACCTCGTTCGTTAGAACAAATATTTCAAGCAAAACAGTCTCAACAACCTCAAGGCTGGAAATACGAAATGCAGGTGTCAATGTTGGAAATATACAACGAAACCATTCGCGATTTATTATCTACAAACAGATCATCATCGGATGTATCACGCGTGGAAAATGGTACTCCTGGAAAGCAATACACAATCAAACATGACGTAAATGGAAATACACATGTTTCTGATCTTACAGTAGTGGATGTACACAGTGCGAAAGAAGTCGCGTTTCTTTTAAATCAAGCTGCAAATAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAATCGTCAAGAAGTCATTTCGTGTTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAATCTAATTGACCTTGCTGGTAGCGAGCGTCTTTCAAAGAGTGGTTCAACCGGTGACCGGTTGAGAGAAACTCAGGCAATTAACAAAAGCTTGTCATCATTGAGTGATGTCATATTTGCCTTGGCCAAGAAGGAAGATCATGTGCCATTCAGGAACTCAAAGCTTACATATCTTCTTCAACCTTGTCTTGGCGGGGACTCAAAGACGTTAATGTTTGTAAACATATCACCTGATCCTTCTTCGGTTGGCGAGTCACTATGCTCACTCCGGTTTGCTTCTAGAGTAAATGCTTGTGAGATTGGAACACCTCGTCGTCAGACCAATGGCCGCGCTACTGACTCTCGTTTGAGCTATTTCTGA
Protein sequence

>Msa0609430

MVTKIQNRPPLSLTHTSPTPSEFQNFVGDKHLLETMVETPINGRIRQALTVVNGGHDVGLSSAPPSNAGSDYGVIEFTREDVEALLNEKAKKKERFNYKERCENMVDYIKRLKVCIRWFQDLETSYSIDQEKLKNSLEMTKQKSIEIEMLLKIKEEELNLIIIEMRKNCTSLQEKLIKEEAEKSAAVESLSKEREARLDIERSHTTLSEDLGKAEREIQSANQKISSLNEMYKRLQEYITSLQQYNGKLHTELSSVEDELKRVEKEKATAEENIAMLKGQLTLSISSQEEATKQKDDLASEVYSMRGELKQVRDDRDRQLSQAQSLNAEFMKLKESRENSCIELDSLTLKANELEEKSSLKENQIKALQEKLAAAEKKLQVTDVSVFETRTEFEGQQKLVDELQKRLEDSEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESRGTEGKIFSYPLSMETSGRGIDLAQNGQKHSFKFDKVFIQDVSQEEVFVEVSQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPDEKGLIPRSLEQIFQAKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNRSSSDVSRVENGTPGKQYTIKHDVNGNTHVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLRETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRATDSRLSYF*