Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202110 | AES65381.1 | 89.041 | 146 | 1 | 1 | 1 | 146 | 1 | 131 | 1.05e-86 | 259 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202110 | sp|Q8LFQ6|GRXC4_ARATH | 56.618 | 136 | 44 | 1 | 3 | 138 | 7 | 127 | 1.31e-50 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202110 | G7IID8 | 89.041 | 146 | 1 | 1 | 1 | 146 | 1 | 131 | 5.00e-87 | 259 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa0202110 | 0.809340 | 1.985978e-50 | -8.615850e-47 |
| Msa0004540 | Msa0202110 | 0.801315 | 9.543798e-49 | -8.615850e-47 |
| Msa0010490 | Msa0202110 | 0.811735 | 6.033710e-51 | -8.615850e-47 |
| Msa0010500 | Msa0202110 | 0.801295 | 9.631278e-49 | -8.615850e-47 |
| Msa0017390 | Msa0202110 | 0.813448 | 2.546588e-51 | -8.615850e-47 |
| Msa0020390 | Msa0202110 | 0.833562 | 4.967338e-56 | -8.615850e-47 |
| Msa0029260 | Msa0202110 | 0.808362 | 3.214715e-50 | -8.615850e-47 |
| Msa0031820 | Msa0202110 | 0.812697 | 3.721679e-51 | -8.615850e-47 |
| Msa0033880 | Msa0202110 | 0.872783 | 2.439103e-67 | -8.615850e-47 |
| Msa0037160 | Msa0202110 | 0.816744 | 4.721259e-52 | -8.615850e-47 |
| Msa0041690 | Msa0202110 | 0.819474 | 1.139887e-52 | -8.615850e-47 |
| Msa0042280 | Msa0202110 | 0.823231 | 1.548455e-53 | -8.615850e-47 |
| Msa0048180 | Msa0202110 | 0.841147 | 5.666108e-58 | -8.615850e-47 |
| Msa0057590 | Msa0202110 | 0.811203 | 7.874426e-51 | -8.615850e-47 |
| Msa0068000 | Msa0202110 | 0.812191 | 4.799917e-51 | -8.615850e-47 |
| Msa0075170 | Msa0202110 | 0.813735 | 2.202379e-51 | -8.615850e-47 |
| Msa0080730 | Msa0202110 | 0.822424 | 2.386564e-53 | -8.615850e-47 |
| Msa0081650 | Msa0202110 | 0.838198 | 3.315331e-57 | -8.615850e-47 |
| Msa0090520 | Msa0202110 | 0.842696 | 2.208837e-58 | -8.615850e-47 |
| Msa0091610 | Msa0202110 | 0.807294 | 5.422677e-50 | -8.615850e-47 |
| Msa0093010 | Msa0202110 | 0.805289 | 1.434048e-49 | -8.615850e-47 |
| Msa0093850 | Msa0202110 | 0.831329 | 1.775734e-55 | -8.615850e-47 |
| Msa0097590 | Msa0202110 | 0.801543 | 8.570212e-49 | -8.615850e-47 |
| Msa0097610 | Msa0202110 | 0.801756 | 7.748699e-49 | -8.615850e-47 |
| Msa0105520 | Msa0202110 | 0.825696 | 4.072171e-54 | -8.615850e-47 |
| Msa0106620 | Msa0202110 | 0.814467 | 1.518034e-51 | -8.615850e-47 |
| Msa0106710 | Msa0202110 | 0.807617 | 4.631057e-50 | -8.615850e-47 |
| Msa0115370 | Msa0202110 | 0.801663 | 8.095419e-49 | -8.615850e-47 |
| Msa0116380 | Msa0202110 | 0.825311 | 5.022054e-54 | -8.615850e-47 |
| Msa0126770 | Msa0202110 | 0.807375 | 5.211856e-50 | -8.615850e-47 |
| Msa0126840 | Msa0202110 | 0.822506 | 2.284285e-53 | -8.615850e-47 |
| Msa0127040 | Msa0202110 | 0.816278 | 6.006463e-52 | -8.615850e-47 |
| Msa0127850 | Msa0202110 | 0.869290 | 3.458523e-66 | -8.615850e-47 |
| Msa0136120 | Msa0202110 | 0.803954 | 2.724447e-49 | -8.615850e-47 |
| Msa0137990 | Msa0202110 | 0.841152 | 5.649544e-58 | -8.615850e-47 |
| Msa0138360 | Msa0202110 | 0.826744 | 2.292869e-54 | -8.615850e-47 |
| Msa0141400 | Msa0202110 | 0.801246 | 9.855097e-49 | -8.615850e-47 |
| Msa0146280 | Msa0202110 | 0.801495 | 8.766101e-49 | -8.615850e-47 |
| Msa0147980 | Msa0202110 | 0.815320 | 9.821922e-52 | -8.615850e-47 |
| Msa0163760 | Msa0202110 | 0.810716 | 1.004000e-50 | -8.615850e-47 |
| Msa0167480 | Msa0202110 | 0.820710 | 5.940809e-53 | -8.615850e-47 |
| Msa0167980 | Msa0202110 | 0.804898 | 1.731899e-49 | -8.615850e-47 |
| Msa0169300 | Msa0202110 | 0.807135 | 5.860913e-50 | -8.615850e-47 |
| Msa0171850 | Msa0202110 | 0.805010 | 1.640919e-49 | -8.615850e-47 |
| Msa0174000 | Msa0202110 | 0.860671 | 1.755220e-63 | -8.615850e-47 |
| Msa0177210 | Msa0202110 | 0.823638 | 1.243496e-53 | -8.615850e-47 |
| Msa0183850 | Msa0202110 | 0.820452 | 6.807581e-53 | -8.615850e-47 |
| Msa0183870 | Msa0202110 | 0.808199 | 3.482661e-50 | -8.615850e-47 |
| Msa0183900 | Msa0202110 | 0.838927 | 2.149314e-57 | -8.615850e-47 |
| Msa0188350 | Msa0202110 | 0.836253 | 1.042891e-56 | -8.615850e-47 |
| Msa0199420 | Msa0202110 | 0.805723 | 1.163116e-49 | -8.615850e-47 |
| Msa0202110 | Msa0202410 | 0.806662 | 7.376231e-50 | -8.615850e-47 |
| Msa0202110 | Msa0204960 | 0.815084 | 1.108314e-51 | -8.615850e-47 |
| Msa0202110 | Msa0217700 | 0.810147 | 1.331627e-50 | -8.615850e-47 |
| Msa0202110 | Msa0223330 | 0.834116 | 3.610727e-56 | -8.615850e-47 |
| Msa0202110 | Msa0225670 | 0.812069 | 5.103621e-51 | -8.615850e-47 |
| Msa0202110 | Msa0226330 | 0.802267 | 6.084252e-49 | -8.615850e-47 |
| Msa0202110 | Msa0230150 | 0.820238 | 7.624149e-53 | -8.615850e-47 |
| Msa0202110 | Msa0231100 | 0.832792 | 7.723289e-56 | -8.615850e-47 |
| Msa0202110 | Msa0231190 | 0.804324 | 2.281532e-49 | -8.615850e-47 |
| Msa0202110 | Msa0231790 | 0.807639 | 4.581642e-50 | -8.615850e-47 |
| Msa0202110 | Msa0233370 | 0.819933 | 8.950917e-53 | -8.615850e-47 |
| Msa0202110 | Msa0240900 | 0.814340 | 1.619597e-51 | -8.615850e-47 |
| Msa0202110 | Msa0241830 | 0.880649 | 4.611961e-70 | -8.615850e-47 |
| Msa0202110 | Msa0244970 | 0.810885 | 9.227416e-51 | -8.615850e-47 |
| Msa0202110 | Msa0244980 | 0.825588 | 4.319348e-54 | -8.615850e-47 |
| Msa0202110 | Msa0245060 | 0.815042 | 1.132238e-51 | -8.615850e-47 |
| Msa0202110 | Msa0245430 | 0.811490 | 6.820768e-51 | -8.615850e-47 |
| Msa0202110 | Msa0249580 | 0.835791 | 1.366286e-56 | -8.615850e-47 |
| Msa0202110 | Msa0257490 | 0.819513 | 1.116751e-52 | -8.615850e-47 |
| Msa0202110 | Msa0261170 | 0.833917 | 4.048219e-56 | -8.615850e-47 |
| Msa0202110 | Msa0262480 | 0.811738 | 6.024020e-51 | -8.615850e-47 |
| Msa0202110 | Msa0269470 | 0.816572 | 5.161697e-52 | -8.615850e-47 |
| Msa0202110 | Msa0275360 | 0.826403 | 2.764651e-54 | -8.615850e-47 |
| Msa0202110 | Msa0279850 | 0.818169 | 2.254809e-52 | -8.615850e-47 |
| Msa0202110 | Msa0281430 | 0.802648 | 5.077110e-49 | -8.615850e-47 |
| Msa0202110 | Msa0281530 | 0.830978 | 2.165504e-55 | -8.615850e-47 |
| Msa0202110 | Msa0283420 | 0.832460 | 9.335474e-56 | -8.615850e-47 |
| Msa0202110 | Msa0288080 | 0.836728 | 7.891965e-57 | -8.615850e-47 |
| Msa0202110 | Msa0296250 | 0.846137 | 2.623311e-59 | -8.615850e-47 |
| Msa0202110 | Msa0296790 | 0.818873 | 1.561280e-52 | -8.615850e-47 |
| Msa0202110 | Msa0296820 | 0.813238 | 2.831577e-51 | -8.615850e-47 |
| Msa0202110 | Msa0296920 | 0.808160 | 3.550008e-50 | -8.615850e-47 |
| Msa0202110 | Msa0300350 | 0.821963 | 3.052832e-53 | -8.615850e-47 |
| Msa0202110 | Msa0311720 | 0.822643 | 2.123124e-53 | -8.615850e-47 |
| Msa0202110 | Msa0317970 | 0.829557 | 4.815023e-55 | -8.615850e-47 |
| Msa0202110 | Msa0320590 | 0.839523 | 1.505700e-57 | -8.615850e-47 |
| Msa0202110 | Msa0321690 | 0.820663 | 6.091143e-53 | -8.615850e-47 |
| Msa0202110 | Msa0322900 | 0.873130 | 1.866194e-67 | -8.615850e-47 |
| Msa0202110 | Msa0326480 | 0.809571 | 1.771544e-50 | -8.615850e-47 |
| Msa0202110 | Msa0332640 | 0.806962 | 6.376994e-50 | -8.615850e-47 |
| Msa0202110 | Msa0339910 | 0.823265 | 1.519885e-53 | -8.615850e-47 |
| Msa0202110 | Msa0341690 | 0.832275 | 1.037505e-55 | -8.615850e-47 |
| Msa0202110 | Msa0357900 | 0.835317 | 1.800898e-56 | -8.615850e-47 |
| Msa0202110 | Msa0363060 | 0.806426 | 8.275584e-50 | -8.615850e-47 |
| Msa0202110 | Msa0365100 | 0.802414 | 5.674324e-49 | -8.615850e-47 |
| Msa0202110 | Msa0371500 | 0.822348 | 2.484985e-53 | -8.615850e-47 |
| Msa0202110 | Msa0376280 | 0.803518 | 3.355425e-49 | -8.615850e-47 |
| Msa0202110 | Msa0382310 | 0.801856 | 7.390700e-49 | -8.615850e-47 |
| Msa0202110 | Msa0382370 | 0.807591 | 4.691330e-50 | -8.615850e-47 |
| Msa0202110 | Msa0384670 | 0.802951 | 4.397448e-49 | -8.615850e-47 |
| Msa0202110 | Msa0384880 | 0.812684 | 3.746562e-51 | -8.615850e-47 |
| Msa0202110 | Msa0385500 | 0.814095 | 1.833874e-51 | -8.615850e-47 |
| Msa0202110 | Msa0385830 | 0.812655 | 3.800435e-51 | -8.615850e-47 |
| Msa0202110 | Msa0405650 | 0.816055 | 6.733891e-52 | -8.615850e-47 |
| Msa0202110 | Msa0413730 | 0.801535 | 8.600153e-49 | -8.615850e-47 |
| Msa0202110 | Msa0419720 | 0.824670 | 7.117478e-54 | -8.615850e-47 |
| Msa0202110 | Msa0423750 | 0.811546 | 6.632150e-51 | -8.615850e-47 |
| Msa0202110 | Msa0426760 | 0.813954 | 1.970000e-51 | -8.615850e-47 |
| Msa0202110 | Msa0427120 | 0.804477 | 2.120407e-49 | -8.615850e-47 |
| Msa0202110 | Msa0432160 | 0.802369 | 5.795958e-49 | -8.615850e-47 |
| Msa0202110 | Msa0434570 | 0.811081 | 8.368693e-51 | -8.615850e-47 |
| Msa0202110 | Msa0434770 | 0.807928 | 3.977058e-50 | -8.615850e-47 |
| Msa0202110 | Msa0437020 | 0.822751 | 2.003412e-53 | -8.615850e-47 |
| Msa0202110 | Msa0443390 | 0.820102 | 8.189294e-53 | -8.615850e-47 |
| Msa0202110 | Msa0450400 | -0.854110 | 1.531077e-61 | -8.615850e-47 |
| Msa0202110 | Msa0476680 | 0.807777 | 4.282518e-50 | -8.615850e-47 |
| Msa0202110 | Msa0479200 | 0.834888 | 2.310210e-56 | -8.615850e-47 |
| Msa0202110 | Msa0483740 | 0.813048 | 3.117749e-51 | -8.615850e-47 |
| Msa0202110 | Msa0484740 | 0.810873 | 9.282612e-51 | -8.615850e-47 |
| Msa0202110 | Msa0485240 | 0.832530 | 8.967132e-56 | -8.615850e-47 |
| Msa0202110 | Msa0505380 | 0.823149 | 1.617916e-53 | -8.615850e-47 |
| Msa0202110 | Msa0511770 | 0.840705 | 7.404735e-58 | -8.615850e-47 |
| Msa0202110 | Msa0513260 | 0.801786 | 7.638587e-49 | -8.615850e-47 |
| Msa0202110 | Msa0518030 | 0.839729 | 1.331015e-57 | -8.615850e-47 |
| Msa0202110 | Msa0521010 | 0.805111 | 1.562704e-49 | -8.615850e-47 |
| Msa0202110 | Msa0527020 | 0.803301 | 3.720799e-49 | -8.615850e-47 |
| Msa0202110 | Msa0527150 | 0.812712 | 3.693287e-51 | -8.615850e-47 |
| Msa0202110 | Msa0527190 | 0.811175 | 7.985746e-51 | -8.615850e-47 |
| Msa0202110 | Msa0531250 | 0.827213 | 1.770896e-54 | -8.615850e-47 |
| Msa0202110 | Msa0531650 | 0.815109 | 1.094133e-51 | -8.615850e-47 |
| Msa0202110 | Msa0547990 | 0.846596 | 1.967254e-59 | -8.615850e-47 |
| Msa0202110 | Msa0550570 | 0.801941 | 7.098551e-49 | -8.615850e-47 |
| Msa0202110 | Msa0554290 | 0.808509 | 2.991486e-50 | -8.615850e-47 |
| Msa0202110 | Msa0560500 | 0.836651 | 8.259065e-57 | -8.615850e-47 |
| Msa0202110 | Msa0581110 | 0.817726 | 2.839703e-52 | -8.615850e-47 |
| Msa0202110 | Msa0581280 | 0.824022 | 1.011030e-53 | -8.615850e-47 |
| Msa0202110 | Msa0581690 | 0.800023 | 1.750685e-48 | -8.615850e-47 |
| Msa0202110 | Msa0583360 | -0.804235 | 2.380775e-49 | -8.615850e-47 |
| Msa0202110 | Msa0583500 | 0.803286 | 3.748834e-49 | -8.615850e-47 |
| Msa0202110 | Msa0588090 | 0.816718 | 4.785260e-52 | -8.615850e-47 |
| Msa0202110 | Msa0588360 | 0.811046 | 8.514587e-51 | -8.615850e-47 |
| Msa0202110 | Msa0593700 | 0.836226 | 1.059517e-56 | -8.615850e-47 |
| Msa0202110 | Msa0615580 | 0.813830 | 2.098127e-51 | -8.615850e-47 |
| Msa0202110 | Msa0618950 | 0.802385 | 5.752839e-49 | -8.615850e-47 |
| Msa0202110 | Msa0619420 | 0.808892 | 2.477027e-50 | -8.615850e-47 |
| Msa0202110 | Msa0620620 | 0.830819 | 2.369401e-55 | -8.615850e-47 |
| Msa0202110 | Msa0628420 | 0.823141 | 1.625244e-53 | -8.615850e-47 |
| Msa0202110 | Msa0633570 | 0.819328 | 1.230337e-52 | -8.615850e-47 |
| Msa0202110 | Msa0642970 | 0.812243 | 4.676982e-51 | -8.615850e-47 |
| Msa0202110 | Msa0644030 | 0.839636 | 1.407445e-57 | -8.615850e-47 |
| Msa0202110 | Msa0662630 | 0.812287 | 4.573326e-51 | -8.615850e-47 |
| Msa0202110 | Msa0662890 | 0.808000 | 3.838740e-50 | -8.615850e-47 |
| Msa0202110 | Msa0666230 | 0.847159 | 1.379231e-59 | -8.615850e-47 |
| Msa0202110 | Msa0669520 | 0.809488 | 1.845878e-50 | -8.615850e-47 |
| Msa0202110 | Msa0669760 | 0.803867 | 2.840047e-49 | -8.615850e-47 |
| Msa0202110 | Msa0672100 | 0.812809 | 3.517226e-51 | -8.615850e-47 |
| Msa0202110 | Msa0693330 | 0.820982 | 5.143823e-53 | -8.615850e-47 |
| Msa0202110 | Msa0697720 | 0.815332 | 9.758794e-52 | -8.615850e-47 |
| Msa0202110 | Msa0705390 | 0.811806 | 5.824009e-51 | -8.615850e-47 |
| Msa0202110 | Msa0738100 | 0.802745 | 4.848454e-49 | -8.615850e-47 |
| Msa0202110 | Msa0745200 | 0.803888 | 2.812032e-49 | -8.615850e-47 |
| Msa0202110 | Msa0751010 | 0.818184 | 2.237125e-52 | -8.615850e-47 |
| Msa0202110 | Msa0752700 | 0.802418 | 5.662474e-49 | -8.615850e-47 |
| Msa0202110 | Msa0786750 | 0.812942 | 3.288160e-51 | -8.615850e-47 |
| Msa0202110 | Msa0800370 | 0.833349 | 5.612153e-56 | -8.615850e-47 |
| Msa0202110 | Msa0804250 | 0.810505 | 1.114789e-50 | -8.615850e-47 |
| Msa0202110 | Msa0817540 | 0.804693 | 1.911053e-49 | -8.615850e-47 |
| Msa0202110 | Msa0822310 | -0.821950 | 3.074440e-53 | -8.615850e-47 |
| Msa0202110 | Msa0822500 | 0.825203 | 5.329020e-54 | -8.615850e-47 |
| Msa0202110 | Msa0826150 | 0.861163 | 1.244716e-63 | -8.615850e-47 |
| Msa0202110 | Msa0826760 | 0.814080 | 1.848012e-51 | -8.615850e-47 |
| Msa0202110 | Msa0827280 | 0.809735 | 1.633673e-50 | -8.615850e-47 |
| Msa0202110 | Msa0831100 | 0.816872 | 4.420123e-52 | -8.615850e-47 |
| Msa0202110 | Msa0833190 | -0.815148 | 1.072505e-51 | -8.615850e-47 |
| Msa0202110 | Msa0849440 | 0.821040 | 4.987416e-53 | -8.615850e-47 |
| Msa0202110 | Msa0859320 | 0.815426 | 9.300944e-52 | -8.615850e-47 |
| Msa0202110 | Msa0865030 | 0.810143 | 1.334504e-50 | -8.615850e-47 |
| Msa0202110 | Msa0865570 | 0.836412 | 9.503175e-57 | -8.615850e-47 |
| Msa0202110 | Msa0870650 | 0.806303 | 8.782744e-50 | -8.615850e-47 |
| Msa0202110 | Msa0892640 | 0.835838 | 1.329105e-56 | -8.615850e-47 |
| Msa0202110 | Msa0903780 | 0.815253 | 1.016196e-51 | -8.615850e-47 |
| Msa0202110 | Msa0944200 | 0.810758 | 9.828144e-51 | -8.615850e-47 |
| Msa0202110 | Msa0958000 | 0.809544 | 1.795428e-50 | -8.615850e-47 |
| Msa0202110 | Msa0963020 | 0.804331 | 2.274375e-49 | -8.615850e-47 |
| Msa0202110 | Msa1006840 | 0.816173 | 6.338537e-52 | -8.615850e-47 |
| Msa0202110 | Msa1027250 | 0.830467 | 2.889614e-55 | -8.615850e-47 |
| Msa0202110 | Msa1027300 | 0.834183 | 3.473025e-56 | -8.615850e-47 |
| Msa0202110 | Msa1027360 | 0.833867 | 4.165915e-56 | -8.615850e-47 |
| Msa0202110 | Msa1029070 | 0.833001 | 6.852364e-56 | -8.615850e-47 |
| Msa0202110 | Msa1039900 | 0.801001 | 1.106015e-48 | -8.615850e-47 |
| Msa0202110 | Msa1070390 | 0.815378 | 9.531761e-52 | -8.615850e-47 |
| Msa0202110 | Msa1071320 | 0.800047 | 1.730678e-48 | -8.615850e-47 |
| Msa0202110 | Msa1072710 | 0.822942 | 1.808532e-53 | -8.615850e-47 |
| Msa0202110 | Msa1089320 | 0.838208 | 3.296811e-57 | -8.615850e-47 |
| Msa0202110 | Msa1089450 | 0.839904 | 1.198829e-57 | -8.615850e-47 |
| Msa0202110 | Msa1121680 | 0.800783 | 1.225724e-48 | -8.615850e-47 |
| Msa0202110 | Msa1123350 | 0.808576 | 2.893672e-50 | -8.615850e-47 |
| Msa0202110 | Msa1123770 | 0.806770 | 6.999847e-50 | -8.615850e-47 |
| Msa0202110 | Msa1126450 | 0.801847 | 7.422594e-49 | -8.615850e-47 |
| Msa0202110 | Msa1126830 | 0.817808 | 2.721432e-52 | -8.615850e-47 |
| Msa0202110 | Msa1127540 | 0.812445 | 4.224460e-51 | -8.615850e-47 |
| Msa0202110 | Msa1127590 | 0.838496 | 2.778017e-57 | -8.615850e-47 |
| Msa0202110 | Msa1135890 | 0.840022 | 1.116595e-57 | -8.615850e-47 |
| Msa0202110 | Msa1156160 | 0.828630 | 8.080942e-55 | -8.615850e-47 |
| Msa0202110 | Msa1158230 | 0.817620 | 3.000096e-52 | -8.615850e-47 |
| Msa0202110 | Msa1165780 | 0.838929 | 2.146636e-57 | -8.615850e-47 |
| Msa0202110 | Msa1169080 | 0.813189 | 2.902760e-51 | -8.615850e-47 |
| Msa0202110 | Msa1169910 | 0.800416 | 1.455882e-48 | -8.615850e-47 |
| Msa0202110 | Msa1173300 | 0.810424 | 1.160532e-50 | -8.615850e-47 |
| Msa0202110 | Msa1201810 | 0.832149 | 1.114422e-55 | -8.615850e-47 |
| Msa0202110 | Msa1202580 | 0.859236 | 4.756725e-63 | -8.615850e-47 |
| Msa0202110 | Msa1206310 | 0.800531 | 1.379417e-48 | -8.615850e-47 |
| Msa0202110 | Msa1206650 | 0.811864 | 5.657293e-51 | -8.615850e-47 |
| Msa0202110 | Msa1209200 | 0.810298 | 1.235910e-50 | -8.615850e-47 |
| Msa0202110 | Msa1216260 | 0.814950 | 1.186858e-51 | -8.615850e-47 |
| Msa0202110 | Msa1218450 | 0.824947 | 6.124507e-54 | -8.615850e-47 |
| Msa0202110 | Msa1225860 | -0.800978 | 1.118208e-48 | -8.615850e-47 |
| Msa0202110 | Msa1226610 | 0.800638 | 1.311962e-48 | -8.615850e-47 |
| Msa0202110 | Msa1230580 | 0.815553 | 8.714154e-52 | -8.615850e-47 |
| Msa0202110 | Msa1262890 | 0.811273 | 7.603359e-51 | -8.615850e-47 |
| Msa0202110 | Msa1264210 | 0.837309 | 5.608446e-57 | -8.615850e-47 |
| Msa0202110 | Msa1264420 | 0.801711 | 7.916784e-49 | -8.615850e-47 |
| Msa0202110 | Msa1265590 | 0.837495 | 5.026387e-57 | -8.615850e-47 |
| Msa0202110 | Msa1265630 | 0.800055 | 1.724262e-48 | -8.615850e-47 |
| Msa0202110 | Msa1270690 | 0.800209 | 1.604840e-48 | -8.615850e-47 |
| Msa0202110 | Msa1275110 | 0.836972 | 6.838524e-57 | -8.615850e-47 |
| Msa0202110 | Msa1275590 | 0.805072 | 1.592600e-49 | -8.615850e-47 |
| Msa0202110 | Msa1307180 | 0.819629 | 1.050785e-52 | -8.615850e-47 |
| Msa0202110 | Msa1307600 | 0.803590 | 3.242114e-49 | -8.615850e-47 |
| Msa0202110 | Msa1316360 | 0.827098 | 1.887042e-54 | -8.615850e-47 |
| Msa0202110 | Msa1336560 | 0.830925 | 2.231200e-55 | -8.615850e-47 |
| Msa0202110 | Msa1344310 | 0.803096 | 4.103216e-49 | -8.615850e-47 |
| Msa0202110 | Msa1351540 | 0.867342 | 1.468794e-65 | -8.615850e-47 |
| Msa0202110 | Msa1356610 | 0.825357 | 4.899511e-54 | -8.615850e-47 |
| Msa0202110 | Msa1360980 | 0.809749 | 1.621999e-50 | -8.615850e-47 |
| Msa0202110 | Msa1362420 | 0.808106 | 3.644434e-50 | -8.615850e-47 |
| Msa0202110 | Msa1364210 | 0.837251 | 5.805398e-57 | -8.615850e-47 |
| Msa0202110 | Msa1368080 | 0.830215 | 3.328487e-55 | -8.615850e-47 |
| Msa0202110 | Msa1369690 | 0.810807 | 9.590571e-51 | -8.615850e-47 |
| Msa0202110 | Msa1371520 | 0.811335 | 7.372454e-51 | -8.615850e-47 |
| Msa0202110 | Msa1373820 | 0.808950 | 2.407781e-50 | -8.615850e-47 |
| Msa0202110 | Msa1374060 | 0.803914 | 2.776751e-49 | -8.615850e-47 |
| Msa0202110 | Msa1385720 | 0.804386 | 2.214974e-49 | -8.615850e-47 |
| Msa0202110 | Msa1385890 | 0.804328 | 2.276977e-49 | -8.615850e-47 |
| Msa0202110 | Msa1389850 | 0.822039 | 2.931990e-53 | -8.615850e-47 |
| Msa0202110 | Msa1389880 | 0.811422 | 7.058754e-51 | -8.615850e-47 |
| Msa0202110 | Msa1407190 | 0.807462 | 4.995435e-50 | -8.615850e-47 |
| Msa0202110 | Msa1411950 | 0.828749 | 7.560198e-55 | -8.615850e-47 |
| Msa0202110 | Msa1412660 | 0.822110 | 2.823090e-53 | -8.615850e-47 |
| Msa0202110 | Msa1416370 | 0.829679 | 4.498354e-55 | -8.615850e-47 |
| Msa0202110 | Msa1418240 | 0.821188 | 4.609845e-53 | -8.615850e-47 |
| Msa0202110 | Msa1432480 | 0.806523 | 7.892418e-50 | -8.615850e-47 |
| Msa0202110 | Msa1434090 | 0.826241 | 3.022194e-54 | -8.615850e-47 |
| Msa0202110 | Msa1438050 | 0.823027 | 1.727721e-53 | -8.615850e-47 |
| Msa0202110 | Msa1440310 | 0.820007 | 8.610172e-53 | -8.615850e-47 |
| Msa0202110 | Msa1450720 | 0.830976 | 2.168588e-55 | -8.615850e-47 |
| Msa0202110 | Msa1454680 | 0.819770 | 9.753337e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202110 | MtrunA17_Chr2g0299021 | 89.041 | 146 | 1 | 1 | 1 | 146 | 56 | 186 | 4.17e-90 | 259 |
| Msa0202110 | MtrunA17_Chr5g0404751 | 44.203 | 138 | 60 | 2 | 1 | 136 | 4 | 126 | 5.23e-38 | 125 |
| Msa0202110 | MtrunA17_Chr1g0182971 | 36.283 | 113 | 58 | 1 | 24 | 136 | 79 | 177 | 8.53e-22 | 86.3 |
| Msa0202110 | MtrunA17_Chr3g0117411 | 40.000 | 100 | 45 | 1 | 37 | 136 | 27 | 111 | 2.17e-20 | 80.9 |
| Msa0202110 | MtrunA17_Chr7g0228311 | 38.235 | 102 | 48 | 1 | 35 | 136 | 10 | 96 | 6.27e-20 | 79.3 |
| Msa0202110 | MtrunA17_Chr3g0117391 | 39.000 | 100 | 46 | 1 | 37 | 136 | 30 | 114 | 2.12e-19 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0202110 | AT5G20500.1 | 56.618 | 136 | 44 | 1 | 3 | 138 | 7 | 127 | 1.33e-51 | 160 |
| Msa0202110 | AT1G77370.2 | 46.000 | 150 | 64 | 2 | 2 | 137 | 8 | 154 | 2.04e-40 | 133 |
| Msa0202110 | AT1G77370.1 | 46.324 | 136 | 58 | 1 | 2 | 137 | 8 | 128 | 6.32e-38 | 126 |
| Msa0202110 | AT2G20270.2 | 35.537 | 121 | 65 | 1 | 29 | 136 | 76 | 196 | 1.64e-21 | 86.3 |
| Msa0202110 | AT2G20270.1 | 37.963 | 108 | 53 | 1 | 29 | 136 | 76 | 169 | 3.02e-21 | 85.1 |
| Msa0202110 | AT5G40370.1 | 40.196 | 102 | 46 | 1 | 35 | 136 | 10 | 96 | 9.01e-21 | 81.6 |
| Msa0202110 | AT4G28730.1 | 37.168 | 113 | 57 | 1 | 24 | 136 | 66 | 164 | 1.58e-20 | 82.8 |
| Msa0202110 | AT5G40370.2 | 41.000 | 100 | 44 | 1 | 37 | 136 | 37 | 121 | 3.82e-18 | 75.9 |
| Msa0202110 | AT5G63030.1 | 39.175 | 97 | 44 | 1 | 40 | 136 | 31 | 112 | 1.33e-17 | 73.9 |
| Msa0202110 | AT4G28730.2 | 35.955 | 89 | 43 | 1 | 24 | 112 | 66 | 140 | 3.78e-14 | 65.5 |
Find 41 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCGATCTTGTTGTTATTAA+TGG | 0.134862 | 2_1:-24116582 | None:intergenic |
| TTTAGCAATTTCTGTTTATT+TGG | 0.157992 | 2_1:+24116514 | Msa0202110:CDS |
| TTCAAAGATTCAGGATATTT+TGG | 0.189732 | 2_1:+24118788 | Msa0202110:CDS |
| GGACTTCTGGCTAAACTTCT+AGG | 0.320255 | 2_1:+24119011 | Msa0202110:CDS |
| CTTTAATTTATAAAATGTAA+TGG | 0.368814 | 2_1:+24119185 | Msa0202110:three_prime_UTR |
| AGATGATGGTTCAAAGATTC+AGG | 0.370963 | 2_1:+24118779 | Msa0202110:CDS |
| GAATGAGTCTTTACATATAA+AGG | 0.387545 | 2_1:+24119129 | Msa0202110:three_prime_UTR |
| AGCGTATGAGAGTGGACTTC+TGG | 0.389360 | 2_1:+24118998 | Msa0202110:CDS |
| TTTGAGGCGGATTATTGATA+AGG | 0.394901 | 2_1:+24119060 | Msa0202110:exon |
| TTGAGGCGGATTATTGATAA+GGG | 0.401259 | 2_1:+24119061 | Msa0202110:exon |
| GCTTCAGCAGCTTCATCTGT+TGG | 0.407482 | 2_1:+24116542 | Msa0202110:CDS |
| ACATGCTTACATGGGTGATC+TGG | 0.423544 | 2_1:-24116314 | None:intergenic |
| GGTGATCTGGTTTGGTGAGT+TGG | 0.434784 | 2_1:-24116301 | None:intergenic |
| TCATCAAGCTCCACAACATA+TGG | 0.443186 | 2_1:-24118215 | None:intergenic |
| CTTACATGGGTGATCTGGTT+TGG | 0.455279 | 2_1:-24116309 | None:intergenic |
| AACCATCATCTGCAATGAAA+AGG | 0.471141 | 2_1:-24118767 | None:intergenic |
| TACTTACGGACAATATGTCT+TGG | 0.504862 | 2_1:-24116612 | None:intergenic |
| AGTTGGAGATTGTGAATGAC+AGG | 0.509835 | 2_1:-24116284 | None:intergenic |
| ACAATATGTCTTGGAAAAGA+TGG | 0.515296 | 2_1:-24116603 | None:intergenic |
| TTCATCAATGGAAAACACCT+TGG | 0.519493 | 2_1:+24118846 | Msa0202110:CDS |
| GTGGATCATGATGATCTTTG+AGG | 0.530593 | 2_1:+24119044 | Msa0202110:CDS |
| ATCAATGGAAAACACCTTGG+AGG | 0.531584 | 2_1:+24118849 | Msa0202110:CDS |
| AACAATGATGATGGTGATGA+TGG | 0.544654 | 2_1:+24116490 | Msa0202110:CDS |
| AGATTGTGAATGACAGGATA+CGG | 0.551522 | 2_1:-24116278 | None:intergenic |
| CAATATCTTTGTAACAACAA+TGG | 0.554384 | 2_1:-24118739 | None:intergenic |
| TTTAATGGACATGTTCAGGT+AGG | 0.559622 | 2_1:+24119253 | Msa0202110:three_prime_UTR |
| AGTTAAATCAGCGAGAATGA+AGG | 0.571126 | 2_1:+24116466 | Msa0202110:intron |
| AATGAAGGTAACAATGATGA+TGG | 0.593130 | 2_1:+24116481 | Msa0202110:exon |
| AAACACCTTGGAGGATCAGA+TGG | 0.593775 | 2_1:+24118858 | Msa0202110:CDS |
| ACTGTTGAAGCGTATGAGAG+TGG | 0.601661 | 2_1:+24118990 | Msa0202110:CDS |
| GCTCCACAACATATGGCACT+TGG | 0.613899 | 2_1:-24118208 | None:intergenic |
| TGAGGCGGATTATTGATAAG+GGG | 0.619154 | 2_1:+24119062 | Msa0202110:exon |
| TTTCCATTGATGAAAACTTG+TGG | 0.628530 | 2_1:-24118837 | None:intergenic |
| GATCATGATGATCTTTGAGG+CGG | 0.632486 | 2_1:+24119047 | Msa0202110:exon |
| ATACGGATCTGATCTGATGA+CGG | 0.633783 | 2_1:-24116261 | None:intergenic |
| TCAAAGATCATCATGATCCA+CGG | 0.634824 | 2_1:-24119042 | None:intergenic |
| GAACCAAGTGCCATATGTTG+TGG | 0.634853 | 2_1:+24118205 | Msa0202110:CDS |
| ACTTACCATCTGATCCTCCA+AGG | 0.638772 | 2_1:-24118863 | None:intergenic |
| AAGTAGCTGGAAAACTAACA+TGG | 0.655102 | 2_1:-24119229 | None:intergenic |
| GTTGTGGAGCTTGATGAGAG+AGG | 0.664144 | 2_1:+24118221 | Msa0202110:CDS |
| ACTTCTAGGAATTGAGACCG+TGG | 0.695991 | 2_1:+24119025 | Msa0202110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAATTTAGAATTTCAAA+TGG | + | chr2_1:24117508-24117527 | Msa0202110:intron | 10.0% |
| !!! | CTTTAATTTATAAAATGTAA+TGG | + | chr2_1:24119185-24119204 | Msa0202110:three_prime_UTR | 10.0% |
| !!! | AAATTGTCTTTTAACAAAAA+TGG | - | chr2_1:24116345-24116364 | None:intergenic | 15.0% |
| !! | TAAAATGAAAAACAAAATGA+TGG | - | chr2_1:24116402-24116421 | None:intergenic | 15.0% |
| !!! | TAACATGCATTTTATAAAAT+GGG | - | chr2_1:24117487-24117506 | None:intergenic | 15.0% |
| !!! | TTTCAACATTTTTATTTTAG+GGG | - | chr2_1:24117933-24117952 | None:intergenic | 15.0% |
| !!! | GTTTCAACATTTTTATTTTA+GGG | - | chr2_1:24117934-24117953 | None:intergenic | 15.0% |
| !!! | AGTTTCAACATTTTTATTTT+AGG | - | chr2_1:24117935-24117954 | None:intergenic | 15.0% |
| !! | TACGTATTATATAAATAATG+TGG | + | chr2_1:24118374-24118393 | Msa0202110:intron | 15.0% |
| !! | TTTAGCAATTTCTGTTTATT+TGG | + | chr2_1:24116514-24116533 | Msa0202110:CDS | 20.0% |
| !! | AAAAACTACAAAATCTCAAA+TGG | - | chr2_1:24117054-24117073 | None:intergenic | 20.0% |
| !! | TTCAAATTCTACTATGTTAT+AGG | + | chr2_1:24117108-24117127 | Msa0202110:intron | 20.0% |
| !!! | CTAACATGCATTTTATAAAA+TGG | - | chr2_1:24117488-24117507 | None:intergenic | 20.0% |
| !! | ATTGTAGGAATCAAAAAATT+TGG | + | chr2_1:24117700-24117719 | Msa0202110:intron | 20.0% |
| !!! | GTGATTTATTTTGTATTCAT+TGG | + | chr2_1:24118112-24118131 | Msa0202110:intron | 20.0% |
| !!! | GATTTCTTTGTTTTGAATAT+AGG | + | chr2_1:24118147-24118166 | Msa0202110:intron | 20.0% |
| !!! | TGTTTCAGATTTTTTTTAAC+AGG | + | chr2_1:24118329-24118348 | Msa0202110:intron | 20.0% |
| !!! | TTAACTTGATCTATTTCATT+AGG | + | chr2_1:24118442-24118461 | Msa0202110:intron | 20.0% |
| !!! | TTTTACTTTGATAGATGTTT+AGG | + | chr2_1:24118714-24118733 | Msa0202110:intron | 20.0% |
| !! | TTTACTTTGATAGATGTTTA+GGG | + | chr2_1:24118715-24118734 | Msa0202110:intron | 20.0% |
| !!! | GATATTTTGGTTAATATTGT+CGG | + | chr2_1:24118801-24118820 | Msa0202110:CDS | 20.0% |
| !!! | ATATTTTGGTTAATATTGTC+GGG | + | chr2_1:24118802-24118821 | Msa0202110:CDS | 20.0% |
| ! | GACTCATTATATTGATAAGT+AGG | + | chr2_1:24116816-24116835 | Msa0202110:intron | 25.0% |
| ! | CCAAATAAAGAACAAAAAGA+GGG | - | chr2_1:24117315-24117334 | None:intergenic | 25.0% |
| !!! | CCTCTTTTTGTTCTTTATTT+GGG | + | chr2_1:24117313-24117332 | Msa0202110:intron | 25.0% |
| !!! | TAAGTTTTGAATAGGATTGT+AGG | + | chr2_1:24117685-24117704 | Msa0202110:intron | 25.0% |
| ! | ACTTTGATTGTTTATTCATC+TGG | - | chr2_1:24117784-24117803 | None:intergenic | 25.0% |
| ! | AAAAATTGAAACTTTACAGC+AGG | + | chr2_1:24118071-24118090 | Msa0202110:intron | 25.0% |
| !!! | AGAAGATAGTTTGTTTCTTT+CGG | + | chr2_1:24118638-24118657 | Msa0202110:intron | 25.0% |
| ! | TTACTTTGATAGATGTTTAG+GGG | + | chr2_1:24118716-24118735 | Msa0202110:intron | 25.0% |
| ! | CAATATCTTTGTAACAACAA+TGG | - | chr2_1:24118742-24118761 | None:intergenic | 25.0% |
| !! | TTCAAAGATTCAGGATATTT+TGG | + | chr2_1:24118788-24118807 | Msa0202110:CDS | 25.0% |
| !!! | ATGGTAAGTATTTTTTAGCT+AGG | + | chr2_1:24118877-24118896 | Msa0202110:intron | 25.0% |
| ! | GAATGAGTCTTTACATATAA+AGG | + | chr2_1:24119129-24119148 | Msa0202110:three_prime_UTR | 25.0% |
| !!! | TTTTCCAGCTACTTTTTTAA+TGG | + | chr2_1:24119238-24119257 | Msa0202110:three_prime_UTR | 25.0% |
| !!! | TGTTTTTTTCTTCACACGTT+TGG | + | chr2_1:24116367-24116386 | Msa0202110:intron | 30.0% |
| TTTAACTGCCAAGAAAAAAC+CGG | - | chr2_1:24116453-24116472 | None:intergenic | 30.0% | |
| AATGAAGGTAACAATGATGA+TGG | + | chr2_1:24116481-24116500 | Msa0202110:exon | 30.0% | |
| ACAATATGTCTTGGAAAAGA+TGG | - | chr2_1:24116606-24116625 | None:intergenic | 30.0% | |
| AAGAGGGATACAAATACTTA+CGG | - | chr2_1:24116629-24116648 | None:intergenic | 30.0% | |
| TTGTGTCTATATCAATAGAG+TGG | - | chr2_1:24116734-24116753 | None:intergenic | 30.0% | |
| GATATAGACACAAACACAAT+TGG | + | chr2_1:24116741-24116760 | Msa0202110:intron | 30.0% | |
| ! | AGTTTTCTATCATGCAATTG+CGG | - | chr2_1:24116875-24116894 | None:intergenic | 30.0% |
| !!! | TCGTTATGTTTTTGAGATGT+AGG | + | chr2_1:24116902-24116921 | Msa0202110:intron | 30.0% |
| !!! | TTTTGAGATGTAGGCATAAT+TGG | + | chr2_1:24116911-24116930 | Msa0202110:intron | 30.0% |
| CTGCTAATGTAAAAAAACAC+CGG | - | chr2_1:24117175-24117194 | None:intergenic | 30.0% | |
| AACAGATAAATGTCGCTAAA+TGG | - | chr2_1:24117272-24117291 | None:intergenic | 30.0% | |
| ! | CCCTCTTTTTGTTCTTTATT+TGG | + | chr2_1:24117312-24117331 | Msa0202110:intron | 30.0% |
| CCCAAATAAAGAACAAAAAG+AGG | - | chr2_1:24117316-24117335 | None:intergenic | 30.0% | |
| TATGTACATTAGTACTCAAG+TGG | + | chr2_1:24117396-24117415 | Msa0202110:intron | 30.0% | |
| ATGTACATTAGTACTCAAGT+GGG | + | chr2_1:24117397-24117416 | Msa0202110:intron | 30.0% | |
| TCATATCTGTAAATGTTCTG+TGG | + | chr2_1:24117557-24117576 | Msa0202110:intron | 30.0% | |
| ! | TCTTCAAAGCTCTAATTGTT+TGG | + | chr2_1:24117582-24117601 | Msa0202110:intron | 30.0% |
| !! | TTGTTTGGTGTTTGGAAAAT+TGG | + | chr2_1:24117597-24117616 | Msa0202110:intron | 30.0% |
| ATTGGAATTCGATATATCCT+TGG | + | chr2_1:24117615-24117634 | Msa0202110:intron | 30.0% | |
| TTCGATATATCCTTGGAATT+TGG | + | chr2_1:24117622-24117641 | Msa0202110:intron | 30.0% | |
| AAGATATGATCCAAATTCCA+AGG | - | chr2_1:24117635-24117654 | None:intergenic | 30.0% | |
| !!! | TGTCTGCTTAAGTTTTGAAT+AGG | + | chr2_1:24117677-24117696 | Msa0202110:intron | 30.0% |
| TTGATTGTTTATTCATCTGG+AGG | - | chr2_1:24117781-24117800 | None:intergenic | 30.0% | |
| TCAGAGAATCTAAACAATCA+GGG | + | chr2_1:24117835-24117854 | Msa0202110:intron | 30.0% | |
| AAGGATAATGAGAGGAAAAA+AGG | - | chr2_1:24117971-24117990 | None:intergenic | 30.0% | |
| AGAAACAAAAGGATAATGAG+AGG | - | chr2_1:24117979-24117998 | None:intergenic | 30.0% | |
| !! | TCTCATTATCCTTTTGTTTC+TGG | + | chr2_1:24117978-24117997 | Msa0202110:intron | 30.0% |
| CTTAAATTTACACACACACA+GGG | + | chr2_1:24118266-24118285 | Msa0202110:intron | 30.0% | |
| AGTTGACATTTATCAAAAGC+AGG | + | chr2_1:24118545-24118564 | Msa0202110:intron | 30.0% | |
| GTTGACATTTATCAAAAGCA+GGG | + | chr2_1:24118546-24118565 | Msa0202110:intron | 30.0% | |
| TTTCCATTGATGAAAACTTG+TGG | - | chr2_1:24118840-24118859 | None:intergenic | 30.0% | |
| ATGTCCATTAAAAAAGTAGC+TGG | - | chr2_1:24119245-24119264 | None:intergenic | 30.0% | |
| !!! | CTTTTTTAATGGACATGTTC+AGG | + | chr2_1:24119249-24119268 | Msa0202110:three_prime_UTR | 30.0% |
| AGCTATTGTATTGAAAAACG+AGG | - | chr2_1:24119281-24119300 | None:intergenic | 30.0% | |
| AGATTGTGAATGACAGGATA+CGG | - | chr2_1:24116281-24116300 | None:intergenic | 35.0% | |
| TTAGTTGACAAATTCCTACC+CGG | + | chr2_1:24116431-24116450 | Msa0202110:intron | 35.0% | |
| TTAACTGCCAAGAAAAAACC+GGG | - | chr2_1:24116452-24116471 | None:intergenic | 35.0% | |
| AGTTAAATCAGCGAGAATGA+AGG | + | chr2_1:24116466-24116485 | Msa0202110:intron | 35.0% | |
| !! | AACAATGATGATGGTGATGA+TGG | + | chr2_1:24116490-24116509 | Msa0202110:CDS | 35.0% |
| !! | GGCGATCTTGTTGTTATTAA+TGG | - | chr2_1:24116585-24116604 | None:intergenic | 35.0% |
| TACTTACGGACAATATGTCT+TGG | - | chr2_1:24116615-24116634 | None:intergenic | 35.0% | |
| AATGAGTCACAGTCAAAAGA+GGG | - | chr2_1:24116645-24116664 | None:intergenic | 35.0% | |
| TAATGAGTCACAGTCAAAAG+AGG | - | chr2_1:24116646-24116665 | None:intergenic | 35.0% | |
| AGATAAATGTCGCTAAATGG+TGG | - | chr2_1:24117269-24117288 | None:intergenic | 35.0% | |
| ! | TGGGCAATTACAGAGATTTT+AGG | - | chr2_1:24117468-24117487 | None:intergenic | 35.0% |
| TACAGATATGACCTATTGAG+TGG | - | chr2_1:24117548-24117567 | None:intergenic | 35.0% | |
| !! | AGCTCTAATTGTTTGGTGTT+TGG | + | chr2_1:24117589-24117608 | Msa0202110:intron | 35.0% |
| AAAACTTAAGCAGACACTCA+AGG | - | chr2_1:24117673-24117692 | None:intergenic | 35.0% | |
| ! | TTTGGTACAAAGTGTTCAGT+TGG | + | chr2_1:24117718-24117737 | Msa0202110:intron | 35.0% |
| GACAAAAAAGAAGCTAAGGT+GGG | - | chr2_1:24117817-24117836 | None:intergenic | 35.0% | |
| TGACAAAAAAGAAGCTAAGG+TGG | - | chr2_1:24117818-24117837 | None:intergenic | 35.0% | |
| CTCTGACAAAAAAGAAGCTA+AGG | - | chr2_1:24117821-24117840 | None:intergenic | 35.0% | |
| GTCAGAGAATCTAAACAATC+AGG | + | chr2_1:24117834-24117853 | Msa0202110:intron | 35.0% | |
| !! | TTTTGGAAGGACATTTGGAT+CGG | - | chr2_1:24117885-24117904 | None:intergenic | 35.0% |
| !!! | CGTTATTTTGGAAGGACATT+TGG | - | chr2_1:24117890-24117909 | None:intergenic | 35.0% |
| !!! | ATTATCCTTTTGTTTCTGGC+TGG | + | chr2_1:24117982-24118001 | Msa0202110:intron | 35.0% |
| CCTGTGTGTGTGTAAATTTA+AGG | - | chr2_1:24118268-24118287 | None:intergenic | 35.0% | |
| CCTTAAATTTACACACACAC+AGG | + | chr2_1:24118265-24118284 | Msa0202110:intron | 35.0% | |
| AAAGTTAGCATCCCATTTCT+CGG | + | chr2_1:24118569-24118588 | Msa0202110:intron | 35.0% | |
| AAGCTTTCTTTCCGAGAAAT+GGG | - | chr2_1:24118583-24118602 | None:intergenic | 35.0% | |
| AACCATCATCTGCAATGAAA+AGG | - | chr2_1:24118770-24118789 | None:intergenic | 35.0% | |
| ! | AGATGATGGTTCAAAGATTC+AGG | + | chr2_1:24118779-24118798 | Msa0202110:CDS | 35.0% |
| TTCATCAATGGAAAACACCT+TGG | + | chr2_1:24118846-24118865 | Msa0202110:CDS | 35.0% | |
| GTCAATGAACAAGTGTTTGA+GGG | - | chr2_1:24118951-24118970 | None:intergenic | 35.0% | |
| AGTCAATGAACAAGTGTTTG+AGG | - | chr2_1:24118952-24118971 | None:intergenic | 35.0% | |
| TCAAAGATCATCATGATCCA+CGG | - | chr2_1:24119045-24119064 | None:intergenic | 35.0% | |
| !! | TTTGAGGCGGATTATTGATA+AGG | + | chr2_1:24119060-24119079 | Msa0202110:exon | 35.0% |
| !! | TTGAGGCGGATTATTGATAA+GGG | + | chr2_1:24119061-24119080 | Msa0202110:exon | 35.0% |
| AAGTAGCTGGAAAACTAACA+TGG | - | chr2_1:24119232-24119251 | None:intergenic | 35.0% | |
| ! | TTTAATGGACATGTTCAGGT+AGG | + | chr2_1:24119253-24119272 | Msa0202110:three_prime_UTR | 35.0% |
| ATACGGATCTGATCTGATGA+CGG | - | chr2_1:24116264-24116283 | None:intergenic | 40.0% | |
| AGTTGGAGATTGTGAATGAC+AGG | - | chr2_1:24116287-24116306 | None:intergenic | 40.0% | |
| TGGAAGAGACATGCTTACAT+GGG | - | chr2_1:24116325-24116344 | None:intergenic | 40.0% | |
| ATGGAAGAGACATGCTTACA+TGG | - | chr2_1:24116326-24116345 | None:intergenic | 40.0% | |
| !!! | ATTCCTACCCGGTTTTTTCT+TGG | + | chr2_1:24116442-24116461 | Msa0202110:intron | 40.0% |
| GACGATGTAACATAACGTAG+TGG | + | chr2_1:24116686-24116705 | Msa0202110:intron | 40.0% | |
| TAGGCATAGTCTATGAAGCA+CGG | + | chr2_1:24117127-24117146 | Msa0202110:intron | 40.0% | |
| ATTGAGTGGAGAAGAACACT+TGG | - | chr2_1:24117534-24117553 | None:intergenic | 40.0% | |
| AGTGTTCTTCTCCACTCAAT+AGG | + | chr2_1:24117534-24117553 | Msa0202110:intron | 40.0% | |
| !! | AGTGTTCAGTTGGCTTGTTA+TGG | + | chr2_1:24117728-24117747 | Msa0202110:intron | 40.0% |
| CATCTGGAGGTAAACATATC+TGG | - | chr2_1:24117768-24117787 | None:intergenic | 40.0% | |
| TCAGGGAATCCAATGTTTAG+CGG | + | chr2_1:24117852-24117871 | Msa0202110:intron | 40.0% | |
| TTTGGAAGGACATTTGGATC+GGG | - | chr2_1:24117884-24117903 | None:intergenic | 40.0% | |
| TAGGGGTAAATAGACTGTGA+CGG | - | chr2_1:24117916-24117935 | None:intergenic | 40.0% | |
| TCATCAAGCTCCACAACATA+TGG | - | chr2_1:24118218-24118237 | None:intergenic | 40.0% | |
| CAAGCTTTCTTTCCGAGAAA+TGG | - | chr2_1:24118584-24118603 | None:intergenic | 40.0% | |
| TTCTCGGAAAGAAAGCTTGT+TGG | + | chr2_1:24118585-24118604 | Msa0202110:intron | 40.0% | |
| ! | TCTCGGAAAGAAAGCTTGTT+GGG | + | chr2_1:24118586-24118605 | Msa0202110:intron | 40.0% |
| AACTGCCTAGTGTAGAGATA+GGG | + | chr2_1:24118662-24118681 | Msa0202110:intron | 40.0% | |
| AGTTTCCCTATCTCTACACT+AGG | - | chr2_1:24118670-24118689 | None:intergenic | 40.0% | |
| ! | GACCTTTTCATTGCAGATGA+TGG | + | chr2_1:24118765-24118784 | Msa0202110:CDS | 40.0% |
| ! | GTGCCACAAGTTTTCATCAA+TGG | + | chr2_1:24118834-24118853 | Msa0202110:CDS | 40.0% |
| ATCAATGGAAAACACCTTGG+AGG | + | chr2_1:24118849-24118868 | Msa0202110:CDS | 40.0% | |
| TCATACGCTTCAACAGTTTC+TGG | - | chr2_1:24118987-24119006 | None:intergenic | 40.0% | |
| GTGGATCATGATGATCTTTG+AGG | + | chr2_1:24119044-24119063 | Msa0202110:CDS | 40.0% | |
| ! | GATCATGATGATCTTTGAGG+CGG | + | chr2_1:24119047-24119066 | Msa0202110:exon | 40.0% |
| !! | TGAGGCGGATTATTGATAAG+GGG | + | chr2_1:24119062-24119081 | Msa0202110:exon | 40.0% |
| CTTACATGGGTGATCTGGTT+TGG | - | chr2_1:24116312-24116331 | None:intergenic | 45.0% | |
| ACATGCTTACATGGGTGATC+TGG | - | chr2_1:24116317-24116336 | None:intergenic | 45.0% | |
| GATGTTCTAGTGTAGCGTAG+TGG | + | chr2_1:24116841-24116860 | Msa0202110:intron | 45.0% | |
| GTTGTGTCAGCTGTCTTTGT+CGG | + | chr2_1:24117210-24117229 | Msa0202110:intron | 45.0% | |
| CTGGAGGTAAACATATCTGG+AGG | - | chr2_1:24117765-24117784 | None:intergenic | 45.0% | |
| AAAAGAAGCTAAGGTGGGTG+AGG | - | chr2_1:24117812-24117831 | None:intergenic | 45.0% | |
| AGGGGTAAATAGACTGTGAC+GGG | - | chr2_1:24117915-24117934 | None:intergenic | 45.0% | |
| TGTAGCCAGCCAGAAACAAA+AGG | - | chr2_1:24117990-24118009 | None:intergenic | 45.0% | |
| GAACCAAGTGCCATATGTTG+TGG | + | chr2_1:24118205-24118224 | Msa0202110:CDS | 45.0% | |
| !! | CTCGGAAAGAAAGCTTGTTG+GGG | + | chr2_1:24118587-24118606 | Msa0202110:intron | 45.0% |
| !! | TCGGAAAGAAAGCTTGTTGG+GGG | + | chr2_1:24118588-24118607 | Msa0202110:intron | 45.0% |
| CAACTGCCTAGTGTAGAGAT+AGG | + | chr2_1:24118661-24118680 | Msa0202110:intron | 45.0% | |
| AAACACCTTGGAGGATCAGA+TGG | + | chr2_1:24118858-24118877 | Msa0202110:CDS | 45.0% | |
| ACTTACCATCTGATCCTCCA+AGG | - | chr2_1:24118866-24118885 | None:intergenic | 45.0% | |
| ACTGTTGAAGCGTATGAGAG+TGG | + | chr2_1:24118990-24119009 | Msa0202110:CDS | 45.0% | |
| ! | GGACTTCTGGCTAAACTTCT+AGG | + | chr2_1:24119011-24119030 | Msa0202110:CDS | 45.0% |
| ! | ACTTCTAGGAATTGAGACCG+TGG | + | chr2_1:24119025-24119044 | Msa0202110:CDS | 45.0% |
| !! | GGTGATCTGGTTTGGTGAGT+TGG | - | chr2_1:24116304-24116323 | None:intergenic | 50.0% |
| CTGCCAAGAAAAAACCGGGT+AGG | - | chr2_1:24116448-24116467 | None:intergenic | 50.0% | |
| GCTTCAGCAGCTTCATCTGT+TGG | + | chr2_1:24116542-24116561 | Msa0202110:CDS | 50.0% | |
| GTTCTAGTGTAGCGTAGTGG+AGG | + | chr2_1:24116844-24116863 | Msa0202110:intron | 50.0% | |
| TATGAAGCACGGACACCTCT+AGG | + | chr2_1:24117138-24117157 | Msa0202110:intron | 50.0% | |
| !!! | GACGGGGACGTTATTTTGGA+AGG | - | chr2_1:24117898-24117917 | None:intergenic | 50.0% |
| !! | CTGTGACGGGGACGTTATTT+TGG | - | chr2_1:24117902-24117921 | None:intergenic | 50.0% |
| GGGGTAAATAGACTGTGACG+GGG | - | chr2_1:24117914-24117933 | None:intergenic | 50.0% | |
| GCTCCACAACATATGGCACT+TGG | - | chr2_1:24118211-24118230 | None:intergenic | 50.0% | |
| GTTGTGGAGCTTGATGAGAG+AGG | + | chr2_1:24118221-24118240 | Msa0202110:CDS | 50.0% | |
| ! | AGCGTATGAGAGTGGACTTC+TGG | + | chr2_1:24118998-24119017 | Msa0202110:CDS | 50.0% |
| TGTCGGAGTCCGTGCTTCAT+AGG | + | chr2_1:24117227-24117246 | Msa0202110:intron | 55.0% | |
| GTCGGAGTCCGTGCTTCATA+GGG | + | chr2_1:24117228-24117247 | Msa0202110:intron | 55.0% | |
| GGGAACGAGCCGCTAAACAT+TGG | - | chr2_1:24117864-24117883 | None:intergenic | 55.0% | |
| !! | GCACGGACACCTCTAGGATC+AGG | + | chr2_1:24117144-24117163 | Msa0202110:intron | 60.0% |
| !! | CCTCTAGGATCAGGCGTGTC+CGG | + | chr2_1:24117153-24117172 | Msa0202110:intron | 60.0% |
| GCGCTGAGCCCTATGAAGCA+CGG | - | chr2_1:24117239-24117258 | None:intergenic | 60.0% | |
| CCGGACACGCCTGATCCTAG+AGG | - | chr2_1:24117156-24117175 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 24116223 | 24119317 | 24116223 | ID=Msa0202110;Name=Msa0202110 |
| chr2_1 | mRNA | 24116223 | 24119317 | 24116223 | ID=Msa0202110-mRNA-1;Parent=Msa0202110;Name=Msa0202110-mRNA-1;_AED=0.12;_eAED=0.12;_QI=118|0.75|0.8|1|0.75|0.6|5|253|146 |
| chr2_1 | exon | 24116223 | 24116326 | 24116223 | ID=Msa0202110-mRNA-1:exon:9315;Parent=Msa0202110-mRNA-1 |
| chr2_1 | exon | 24116468 | 24116627 | 24116468 | ID=Msa0202110-mRNA-1:exon:9316;Parent=Msa0202110-mRNA-1 |
| chr2_1 | exon | 24118169 | 24118242 | 24118169 | ID=Msa0202110-mRNA-1:exon:9317;Parent=Msa0202110-mRNA-1 |
| chr2_1 | exon | 24118736 | 24118879 | 24118736 | ID=Msa0202110-mRNA-1:exon:9318;Parent=Msa0202110-mRNA-1 |
| chr2_1 | exon | 24118988 | 24119317 | 24118988 | ID=Msa0202110-mRNA-1:exon:9319;Parent=Msa0202110-mRNA-1 |
| chr2_1 | five_prime_UTR | 24116223 | 24116326 | 24116223 | ID=Msa0202110-mRNA-1:five_prime_utr;Parent=Msa0202110-mRNA-1 |
| chr2_1 | five_prime_UTR | 24116468 | 24116481 | 24116468 | ID=Msa0202110-mRNA-1:five_prime_utr;Parent=Msa0202110-mRNA-1 |
| chr2_1 | CDS | 24116482 | 24116627 | 24116482 | ID=Msa0202110-mRNA-1:cds;Parent=Msa0202110-mRNA-1 |
| chr2_1 | CDS | 24118169 | 24118242 | 24118169 | ID=Msa0202110-mRNA-1:cds;Parent=Msa0202110-mRNA-1 |
| chr2_1 | CDS | 24118736 | 24118879 | 24118736 | ID=Msa0202110-mRNA-1:cds;Parent=Msa0202110-mRNA-1 |
| chr2_1 | CDS | 24118988 | 24119064 | 24118988 | ID=Msa0202110-mRNA-1:cds;Parent=Msa0202110-mRNA-1 |
| chr2_1 | three_prime_UTR | 24119065 | 24119317 | 24119065 | ID=Msa0202110-mRNA-1:three_prime_utr;Parent=Msa0202110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
