Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438700 | XP_003600611.1 | 98.780 | 82 | 1 | 0 | 1 | 82 | 1 | 82 | 7.71e-51 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438700 | G7J7W8 | 98.780 | 82 | 1 | 0 | 1 | 82 | 1 | 82 | 3.68e-51 | 164 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1438700 | -0.809784 | 1.594318e-50 | -8.615850e-47 |
| Msa0013050 | Msa1438700 | -0.823677 | 1.217746e-53 | -8.615850e-47 |
| Msa0014710 | Msa1438700 | 0.824823 | 6.551217e-54 | -8.615850e-47 |
| Msa0015460 | Msa1438700 | 0.807583 | 4.707960e-50 | -8.615850e-47 |
| Msa0028660 | Msa1438700 | 0.807183 | 5.725853e-50 | -8.615850e-47 |
| Msa0032610 | Msa1438700 | 0.806340 | 8.626504e-50 | -8.615850e-47 |
| Msa0033980 | Msa1438700 | 0.803296 | 3.730662e-49 | -8.615850e-47 |
| Msa0037540 | Msa1438700 | -0.802366 | 5.803748e-49 | -8.615850e-47 |
| Msa0037590 | Msa1438700 | -0.803538 | 3.323840e-49 | -8.615850e-47 |
| Msa0057140 | Msa1438700 | 0.804539 | 2.057841e-49 | -8.615850e-47 |
| Msa0069310 | Msa1438700 | 0.818074 | 2.369668e-52 | -8.615850e-47 |
| Msa0081930 | Msa1438700 | 0.812810 | 3.515355e-51 | -8.615850e-47 |
| Msa0084940 | Msa1438700 | 0.804883 | 1.744675e-49 | -8.615850e-47 |
| Msa0085360 | Msa1438700 | -0.810483 | 1.127367e-50 | -8.615850e-47 |
| Msa0092990 | Msa1438700 | 0.827053 | 1.934438e-54 | -8.615850e-47 |
| Msa0094920 | Msa1438700 | 0.815363 | 9.608991e-52 | -8.615850e-47 |
| Msa0095010 | Msa1438700 | 0.810232 | 1.276886e-50 | -8.615850e-47 |
| Msa0100090 | Msa1438700 | 0.805086 | 1.582139e-49 | -8.615850e-47 |
| Msa0109590 | Msa1438700 | 0.820153 | 7.974153e-53 | -8.615850e-47 |
| Msa0119850 | Msa1438700 | 0.803720 | 3.046485e-49 | -8.615850e-47 |
| Msa0120340 | Msa1438700 | 0.816406 | 5.622629e-52 | -8.615850e-47 |
| Msa1348600 | Msa1438700 | 0.814439 | 1.539599e-51 | -8.615850e-47 |
| Msa1351620 | Msa1438700 | 0.805851 | 1.093086e-49 | -8.615850e-47 |
| Msa1358610 | Msa1438700 | -0.803758 | 2.991623e-49 | -8.615850e-47 |
| Msa1362880 | Msa1438700 | 0.836067 | 1.162797e-56 | -8.615850e-47 |
| Msa1369530 | Msa1438700 | 0.827259 | 1.726875e-54 | -8.615850e-47 |
| Msa1371090 | Msa1438700 | 0.815673 | 8.195420e-52 | -8.615850e-47 |
| Msa1396830 | Msa1438700 | 0.801733 | 7.832222e-49 | -8.615850e-47 |
| Msa1401530 | Msa1438700 | 0.814375 | 1.590778e-51 | -8.615850e-47 |
| Msa1403340 | Msa1438700 | 0.801252 | 9.827211e-49 | -8.615850e-47 |
| Msa1403580 | Msa1438700 | -0.803446 | 3.471920e-49 | -8.615850e-47 |
| Msa1403930 | Msa1438700 | -0.803172 | 3.957575e-49 | -8.615850e-47 |
| Msa1410100 | Msa1438700 | 0.809053 | 2.288696e-50 | -8.615850e-47 |
| Msa1417830 | Msa1438700 | -0.805875 | 1.080500e-49 | -8.615850e-47 |
| Msa1424450 | Msa1438700 | 0.810528 | 1.102199e-50 | -8.615850e-47 |
| Msa1426030 | Msa1438700 | 0.812930 | 3.307995e-51 | -8.615850e-47 |
| Msa1427230 | Msa1438700 | 0.801868 | 7.350165e-49 | -8.615850e-47 |
| Msa1430680 | Msa1438700 | 0.808418 | 3.127157e-50 | -8.615850e-47 |
| Msa1438700 | Msa1439960 | 0.819132 | 1.363480e-52 | -8.615850e-47 |
| Msa1438700 | Msa1440000 | 0.801082 | 1.064808e-48 | -8.615850e-47 |
| Msa1438700 | Msa1443290 | -0.801939 | 7.104646e-49 | -8.615850e-47 |
| Msa1438700 | Msa1444250 | -0.811224 | 7.791882e-51 | -8.615850e-47 |
| Msa1438700 | Msa1444740 | 0.811311 | 7.460825e-51 | -8.615850e-47 |
| Msa1438700 | Msa1445420 | -0.805555 | 1.261254e-49 | -8.615850e-47 |
| Msa1438700 | Msa1451620 | -0.816451 | 5.493888e-52 | -8.615850e-47 |
| Msa1438700 | Msa1455490 | 0.813487 | 2.496787e-51 | -8.615850e-47 |
| Msa1438700 | Msa1459760 | -0.820545 | 6.480889e-53 | -8.615850e-47 |
| Msa1438700 | Msa1460830 | 0.800285 | 1.548729e-48 | -8.615850e-47 |
| Msa1438700 | Msa1465960 | 0.809247 | 2.079030e-50 | -8.615850e-47 |
| Msa0608710 | Msa1438700 | 0.805856 | 1.090756e-49 | -8.615850e-47 |
| Msa0610370 | Msa1438700 | 0.814764 | 1.304664e-51 | -8.615850e-47 |
| Msa0610430 | Msa1438700 | 0.820004 | 8.624575e-53 | -8.615850e-47 |
| Msa0619070 | Msa1438700 | 0.801020 | 1.096555e-48 | -8.615850e-47 |
| Msa0621590 | Msa1438700 | 0.802044 | 6.761721e-49 | -8.615850e-47 |
| Msa0623080 | Msa1438700 | 0.806626 | 7.507621e-50 | -8.615850e-47 |
| Msa0629650 | Msa1438700 | 0.802610 | 5.171383e-49 | -8.615850e-47 |
| Msa0631200 | Msa1438700 | 0.801611 | 8.297888e-49 | -8.615850e-47 |
| Msa0633840 | Msa1438700 | 0.806927 | 6.485840e-50 | -8.615850e-47 |
| Msa0638070 | Msa1438700 | 0.818107 | 2.329858e-52 | -8.615850e-47 |
| Msa0638280 | Msa1438700 | 0.820134 | 8.054504e-53 | -8.615850e-47 |
| Msa0638320 | Msa1438700 | 0.834820 | 2.402425e-56 | -8.615850e-47 |
| Msa0647450 | Msa1438700 | -0.815317 | 9.837835e-52 | -8.615850e-47 |
| Msa0649350 | Msa1438700 | 0.837620 | 4.668717e-57 | -8.615850e-47 |
| Msa0650900 | Msa1438700 | 0.815887 | 7.343291e-52 | -8.615850e-47 |
| Msa0654010 | Msa1438700 | 0.817469 | 3.244931e-52 | -8.615850e-47 |
| Msa0660300 | Msa1438700 | 0.812535 | 4.037632e-51 | -8.615850e-47 |
| Msa0661190 | Msa1438700 | -0.815057 | 1.123404e-51 | -8.615850e-47 |
| Msa0662650 | Msa1438700 | 0.825114 | 5.591747e-54 | -8.615850e-47 |
| Msa0670270 | Msa1438700 | 0.804946 | 1.691930e-49 | -8.615850e-47 |
| Msa0677270 | Msa1438700 | 0.832904 | 7.242009e-56 | -8.615850e-47 |
| Msa0679550 | Msa1438700 | 0.823188 | 1.584069e-53 | -8.615850e-47 |
| Msa0693380 | Msa1438700 | 0.811198 | 7.891074e-51 | -8.615850e-47 |
| Msa0706400 | Msa1438700 | 0.803898 | 2.797774e-49 | -8.615850e-47 |
| Msa0708860 | Msa1438700 | 0.822803 | 1.948268e-53 | -8.615850e-47 |
| Msa0715410 | Msa1438700 | 0.806007 | 1.013946e-49 | -8.615850e-47 |
| Msa0716840 | Msa1438700 | 0.820876 | 5.441028e-53 | -8.615850e-47 |
| Msa0726860 | Msa1438700 | 0.804865 | 1.759399e-49 | -8.615850e-47 |
| Msa0731180 | Msa1438700 | 0.827399 | 1.598586e-54 | -8.615850e-47 |
| Msa0743260 | Msa1438700 | 0.849986 | 2.273912e-60 | -8.615850e-47 |
| Msa0771580 | Msa1438700 | 0.815631 | 8.371866e-52 | -8.615850e-47 |
| Msa0773840 | Msa1438700 | 0.813956 | 1.968526e-51 | -8.615850e-47 |
| Msa0777230 | Msa1438700 | 0.802804 | 4.714188e-49 | -8.615850e-47 |
| Msa0784380 | Msa1438700 | 0.807957 | 3.921822e-50 | -8.615850e-47 |
| Msa0784860 | Msa1438700 | 0.808588 | 2.876747e-50 | -8.615850e-47 |
| Msa0791820 | Msa1438700 | 0.841109 | 5.799042e-58 | -8.615850e-47 |
| Msa0792090 | Msa1438700 | 0.805642 | 1.209757e-49 | -8.615850e-47 |
| Msa0793390 | Msa1438700 | 0.804570 | 2.027213e-49 | -8.615850e-47 |
| Msa0804230 | Msa1438700 | 0.811148 | 8.091529e-51 | -8.615850e-47 |
| Msa0820850 | Msa1438700 | 0.821010 | 5.067170e-53 | -8.615850e-47 |
| Msa0831870 | Msa1438700 | 0.828931 | 6.832431e-55 | -8.615850e-47 |
| Msa0129190 | Msa1438700 | -0.810616 | 1.054927e-50 | -8.615850e-47 |
| Msa0135380 | Msa1438700 | 0.800438 | 1.440921e-48 | -8.615850e-47 |
| Msa0140390 | Msa1438700 | 0.821608 | 3.687871e-53 | -8.615850e-47 |
| Msa0148120 | Msa1438700 | 0.835887 | 1.291271e-56 | -8.615850e-47 |
| Msa0156650 | Msa1438700 | -0.804578 | 2.019611e-49 | -8.615850e-47 |
| Msa0162770 | Msa1438700 | -0.828814 | 7.290806e-55 | -8.615850e-47 |
| Msa0172780 | Msa1438700 | 0.820110 | 8.154276e-53 | -8.615850e-47 |
| Msa0173990 | Msa1438700 | 0.815240 | 1.022864e-51 | -8.615850e-47 |
| Msa0177700 | Msa1438700 | -0.806007 | 1.013795e-49 | -8.615850e-47 |
| Msa0187230 | Msa1438700 | 0.809051 | 2.291025e-50 | -8.615850e-47 |
| Msa0187250 | Msa1438700 | 0.810666 | 1.029032e-50 | -8.615850e-47 |
| Msa0197660 | Msa1438700 | 0.820647 | 6.141894e-53 | -8.615850e-47 |
| Msa0223290 | Msa1438700 | 0.802764 | 4.804409e-49 | -8.615850e-47 |
| Msa0223380 | Msa1438700 | 0.824477 | 7.900903e-54 | -8.615850e-47 |
| Msa0223410 | Msa1438700 | -0.818863 | 1.569618e-52 | -8.615850e-47 |
| Msa0233610 | Msa1438700 | 0.808598 | 2.863143e-50 | -8.615850e-47 |
| Msa1233500 | Msa1438700 | 0.831640 | 1.488439e-55 | -8.615850e-47 |
| Msa1233890 | Msa1438700 | 0.827318 | 1.671266e-54 | -8.615850e-47 |
| Msa1236070 | Msa1438700 | -0.803555 | 3.296964e-49 | -8.615850e-47 |
| Msa1247250 | Msa1438700 | 0.802613 | 5.163035e-49 | -8.615850e-47 |
| Msa1258380 | Msa1438700 | -0.801919 | 7.174837e-49 | -8.615850e-47 |
| Msa1267060 | Msa1438700 | 0.818742 | 1.672071e-52 | -8.615850e-47 |
| Msa1267260 | Msa1438700 | 0.825181 | 5.392271e-54 | -8.615850e-47 |
| Msa1271210 | Msa1438700 | 0.801172 | 1.020815e-48 | -8.615850e-47 |
| Msa1276190 | Msa1438700 | 0.807341 | 5.298814e-50 | -8.615850e-47 |
| Msa1276440 | Msa1438700 | 0.824492 | 7.838001e-54 | -8.615850e-47 |
| Msa1289010 | Msa1438700 | 0.811277 | 7.588210e-51 | -8.615850e-47 |
| Msa1300350 | Msa1438700 | -0.834112 | 3.618321e-56 | -8.615850e-47 |
| Msa1302190 | Msa1438700 | -0.838076 | 3.564255e-57 | -8.615850e-47 |
| Msa1304840 | Msa1438700 | 0.811467 | 6.898386e-51 | -8.615850e-47 |
| Msa1305190 | Msa1438700 | 0.826797 | 2.227499e-54 | -8.615850e-47 |
| Msa1305340 | Msa1438700 | 0.813121 | 3.004189e-51 | -8.615850e-47 |
| Msa1306430 | Msa1438700 | 0.832243 | 1.056586e-55 | -8.615850e-47 |
| Msa1306750 | Msa1438700 | 0.837795 | 4.208940e-57 | -8.615850e-47 |
| Msa1307740 | Msa1438700 | 0.834734 | 2.525585e-56 | -8.615850e-47 |
| Msa1316820 | Msa1438700 | 0.817202 | 3.726156e-52 | -8.615850e-47 |
| Msa1322190 | Msa1438700 | 0.816039 | 6.789751e-52 | -8.615850e-47 |
| Msa1333410 | Msa1438700 | 0.804770 | 1.841387e-49 | -8.615850e-47 |
| Msa1336490 | Msa1438700 | 0.803451 | 3.463646e-49 | -8.615850e-47 |
| Msa1340270 | Msa1438700 | 0.808084 | 3.684892e-50 | -8.615850e-47 |
| Msa1340650 | Msa1438700 | 0.800875 | 1.173676e-48 | -8.615850e-47 |
| Msa0365490 | Msa1438700 | 0.811156 | 8.060031e-51 | -8.615850e-47 |
| Msa0377530 | Msa1438700 | 0.829695 | 4.458031e-55 | -8.615850e-47 |
| Msa0379640 | Msa1438700 | 0.803266 | 3.783359e-49 | -8.615850e-47 |
| Msa0380040 | Msa1438700 | 0.818975 | 1.480189e-52 | -8.615850e-47 |
| Msa0387750 | Msa1438700 | 0.810863 | 9.329715e-51 | -8.615850e-47 |
| Msa0388030 | Msa1438700 | -0.801506 | 8.721311e-49 | -8.615850e-47 |
| Msa0389810 | Msa1438700 | 0.837304 | 5.626070e-57 | -8.615850e-47 |
| Msa0392040 | Msa1438700 | -0.808178 | 3.518058e-50 | -8.615850e-47 |
| Msa0394340 | Msa1438700 | 0.817824 | 2.699361e-52 | -8.615850e-47 |
| Msa0404000 | Msa1438700 | 0.961692 | 5.356709e-120 | -8.615850e-47 |
| Msa0404030 | Msa1438700 | 0.972405 | 1.031748e-134 | -8.615850e-47 |
| Msa0406880 | Msa1438700 | 0.800786 | 1.224224e-48 | -8.615850e-47 |
| Msa0414950 | Msa1438700 | -0.801797 | 7.599285e-49 | -8.615850e-47 |
| Msa0421780 | Msa1438700 | -0.819033 | 1.436434e-52 | -8.615850e-47 |
| Msa0427910 | Msa1438700 | 0.808314 | 3.290888e-50 | -8.615850e-47 |
| Msa0429290 | Msa1438700 | 0.822319 | 2.524027e-53 | -8.615850e-47 |
| Msa0429950 | Msa1438700 | 0.802106 | 6.567002e-49 | -8.615850e-47 |
| Msa0431670 | Msa1438700 | 0.818446 | 1.951479e-52 | -8.615850e-47 |
| Msa0433530 | Msa1438700 | 0.810586 | 1.070914e-50 | -8.615850e-47 |
| Msa0442200 | Msa1438700 | 0.832641 | 8.419321e-56 | -8.615850e-47 |
| Msa0442850 | Msa1438700 | 0.822689 | 2.070739e-53 | -8.615850e-47 |
| Msa0443920 | Msa1438700 | 0.856105 | 4.027385e-62 | -8.615850e-47 |
| Msa0457510 | Msa1438700 | 0.803414 | 3.525537e-49 | -8.615850e-47 |
| Msa0464900 | Msa1438700 | 0.823067 | 1.690481e-53 | -8.615850e-47 |
| Msa0467960 | Msa1438700 | -0.804128 | 2.505787e-49 | -8.615850e-47 |
| Msa0468130 | Msa1438700 | 0.838048 | 3.624657e-57 | -8.615850e-47 |
| Msa0473240 | Msa1438700 | 0.844511 | 7.227746e-59 | -8.615850e-47 |
| Msa0475580 | Msa1438700 | 0.822510 | 2.279143e-53 | -8.615850e-47 |
| Msa0477260 | Msa1438700 | 0.824142 | 9.471814e-54 | -8.615850e-47 |
| Msa0480320 | Msa1438700 | 0.805948 | 1.043258e-49 | -8.615850e-47 |
| Msa0482190 | Msa1438700 | -0.806389 | 8.422763e-50 | -8.615850e-47 |
| Msa0982270 | Msa1438700 | 0.846603 | 1.958642e-59 | -8.615850e-47 |
| Msa0992490 | Msa1438700 | -0.829241 | 5.745410e-55 | -8.615850e-47 |
| Msa0994850 | Msa1438700 | 0.806690 | 7.277705e-50 | -8.615850e-47 |
| Msa0996170 | Msa1438700 | 0.800217 | 1.598766e-48 | -8.615850e-47 |
| Msa1006850 | Msa1438700 | 0.808757 | 2.647252e-50 | -8.615850e-47 |
| Msa1010800 | Msa1438700 | 0.816283 | 5.989077e-52 | -8.615850e-47 |
| Msa1012830 | Msa1438700 | 0.826764 | 2.267474e-54 | -8.615850e-47 |
| Msa1021340 | Msa1438700 | 0.812609 | 3.890284e-51 | -8.615850e-47 |
| Msa1027290 | Msa1438700 | 0.817247 | 3.640899e-52 | -8.615850e-47 |
| Msa1029080 | Msa1438700 | -0.807111 | 5.929124e-50 | -8.615850e-47 |
| Msa1037700 | Msa1438700 | -0.802006 | 6.883740e-49 | -8.615850e-47 |
| Msa1039880 | Msa1438700 | 0.837654 | 4.574932e-57 | -8.615850e-47 |
| Msa1047720 | Msa1438700 | 0.825973 | 3.498926e-54 | -8.615850e-47 |
| Msa1053260 | Msa1438700 | 0.827336 | 1.655495e-54 | -8.615850e-47 |
| Msa1063510 | Msa1438700 | 0.806200 | 9.231571e-50 | -8.615850e-47 |
| Msa1072460 | Msa1438700 | -0.816174 | 6.334546e-52 | -8.615850e-47 |
| Msa1082500 | Msa1438700 | 0.815054 | 1.125358e-51 | -8.615850e-47 |
| Msa1085920 | Msa1438700 | 0.814347 | 1.613888e-51 | -8.615850e-47 |
| Msa1092090 | Msa1438700 | 0.809572 | 1.770465e-50 | -8.615850e-47 |
| Msa1095480 | Msa1438700 | 0.830081 | 3.589297e-55 | -8.615850e-47 |
| Msa1097840 | Msa1438700 | 0.800433 | 1.444544e-48 | -8.615850e-47 |
| Msa0239800 | Msa1438700 | 0.816880 | 4.401918e-52 | -8.615850e-47 |
| Msa0255080 | Msa1438700 | 0.804387 | 2.213204e-49 | -8.615850e-47 |
| Msa0256330 | Msa1438700 | 0.803094 | 4.107638e-49 | -8.615850e-47 |
| Msa0260210 | Msa1438700 | 0.808122 | 3.616106e-50 | -8.615850e-47 |
| Msa0265380 | Msa1438700 | 0.811355 | 7.295952e-51 | -8.615850e-47 |
| Msa0268090 | Msa1438700 | 0.835791 | 1.366170e-56 | -8.615850e-47 |
| Msa0269450 | Msa1438700 | 0.831494 | 1.617043e-55 | -8.615850e-47 |
| Msa0271360 | Msa1438700 | 0.804207 | 2.413230e-49 | -8.615850e-47 |
| Msa0279210 | Msa1438700 | -0.818217 | 2.199380e-52 | -8.615850e-47 |
| Msa0279790 | Msa1438700 | 0.816466 | 5.449829e-52 | -8.615850e-47 |
| Msa0289250 | Msa1438700 | 0.802861 | 4.589056e-49 | -8.615850e-47 |
| Msa0295330 | Msa1438700 | 0.809513 | 1.822961e-50 | -8.615850e-47 |
| Msa0303360 | Msa1438700 | 0.812129 | 4.950865e-51 | -8.615850e-47 |
| Msa0304290 | Msa1438700 | 0.824629 | 7.279352e-54 | -8.615850e-47 |
| Msa0304330 | Msa1438700 | 0.828057 | 1.110799e-54 | -8.615850e-47 |
| Msa0305890 | Msa1438700 | 0.817266 | 3.604640e-52 | -8.615850e-47 |
| Msa0307830 | Msa1438700 | -0.808329 | 3.267570e-50 | -8.615850e-47 |
| Msa0317510 | Msa1438700 | 0.819027 | 1.440520e-52 | -8.615850e-47 |
| Msa0318970 | Msa1438700 | -0.804964 | 1.677443e-49 | -8.615850e-47 |
| Msa0319170 | Msa1438700 | 0.804081 | 2.563301e-49 | -8.615850e-47 |
| Msa0320100 | Msa1438700 | 0.800439 | 1.440661e-48 | -8.615850e-47 |
| Msa0323080 | Msa1438700 | 0.801717 | 7.892904e-49 | -8.615850e-47 |
| Msa0333720 | Msa1438700 | -0.806419 | 8.300066e-50 | -8.615850e-47 |
| Msa0340810 | Msa1438700 | 0.817190 | 3.749740e-52 | -8.615850e-47 |
| Msa0344830 | Msa1438700 | 0.819277 | 1.263709e-52 | -8.615850e-47 |
| Msa0344870 | Msa1438700 | 0.801623 | 8.252144e-49 | -8.615850e-47 |
| Msa0347360 | Msa1438700 | 0.823365 | 1.440619e-53 | -8.615850e-47 |
| Msa0350990 | Msa1438700 | 0.821842 | 3.256297e-53 | -8.615850e-47 |
| Msa0351030 | Msa1438700 | 0.824389 | 8.289936e-54 | -8.615850e-47 |
| Msa0351080 | Msa1438700 | 0.809741 | 1.629145e-50 | -8.615850e-47 |
| Msa1109570 | Msa1438700 | 0.801322 | 9.508706e-49 | -8.615850e-47 |
| Msa1124540 | Msa1438700 | -0.813466 | 2.523112e-51 | -8.615850e-47 |
| Msa1130210 | Msa1438700 | -0.804367 | 2.234858e-49 | -8.615850e-47 |
| Msa1135880 | Msa1438700 | 0.806993 | 6.279257e-50 | -8.615850e-47 |
| Msa1143930 | Msa1438700 | -0.834829 | 2.390711e-56 | -8.615850e-47 |
| Msa1171870 | Msa1438700 | 0.832332 | 1.004059e-55 | -8.615850e-47 |
| Msa1172400 | Msa1438700 | 0.812275 | 4.601949e-51 | -8.615850e-47 |
| Msa1207460 | Msa1438700 | -0.803653 | 3.145831e-49 | -8.615850e-47 |
| Msa1217430 | Msa1438700 | -0.832963 | 7.001566e-56 | -8.615850e-47 |
| Msa1217830 | Msa1438700 | 0.800930 | 1.143820e-48 | -8.615850e-47 |
| Msa1217860 | Msa1438700 | 0.811913 | 5.517702e-51 | -8.615850e-47 |
| Msa1219810 | Msa1438700 | 0.822828 | 1.922130e-53 | -8.615850e-47 |
| Msa0484780 | Msa1438700 | 0.822111 | 2.821201e-53 | -8.615850e-47 |
| Msa0485120 | Msa1438700 | 0.801331 | 9.470950e-49 | -8.615850e-47 |
| Msa0489610 | Msa1438700 | 0.836660 | 8.216099e-57 | -8.615850e-47 |
| Msa0491520 | Msa1438700 | 0.800060 | 1.720681e-48 | -8.615850e-47 |
| Msa0500720 | Msa1438700 | 0.821360 | 4.209395e-53 | -8.615850e-47 |
| Msa0505060 | Msa1438700 | 0.802505 | 5.434193e-49 | -8.615850e-47 |
| Msa0517490 | Msa1438700 | 0.837497 | 5.019855e-57 | -8.615850e-47 |
| Msa0519000 | Msa1438700 | 0.802081 | 6.645455e-49 | -8.615850e-47 |
| Msa0519220 | Msa1438700 | 0.818142 | 2.286941e-52 | -8.615850e-47 |
| Msa0535030 | Msa1438700 | 0.801353 | 9.371410e-49 | -8.615850e-47 |
| Msa0535060 | Msa1438700 | 0.807429 | 5.077761e-50 | -8.615850e-47 |
| Msa0553220 | Msa1438700 | -0.832272 | 1.039259e-55 | -8.615850e-47 |
| Msa0555950 | Msa1438700 | 0.823987 | 1.029991e-53 | -8.615850e-47 |
| Msa0558690 | Msa1438700 | 0.818527 | 1.871426e-52 | -8.615850e-47 |
| Msa0561130 | Msa1438700 | -0.814978 | 1.169512e-51 | -8.615850e-47 |
| Msa0562440 | Msa1438700 | 0.819976 | 8.752516e-53 | -8.615850e-47 |
| Msa0568820 | Msa1438700 | 0.804150 | 2.480575e-49 | -8.615850e-47 |
| Msa0577220 | Msa1438700 | 0.802491 | 5.469784e-49 | -8.615850e-47 |
| Msa0587190 | Msa1438700 | 0.811411 | 7.095355e-51 | -8.615850e-47 |
| Msa0593650 | Msa1438700 | 0.800736 | 1.252942e-48 | -8.615850e-47 |
| Msa0598460 | Msa1438700 | 0.808695 | 2.729150e-50 | -8.615850e-47 |
| Msa0860900 | Msa1438700 | -0.821224 | 4.524746e-53 | -8.615850e-47 |
| Msa0861130 | Msa1438700 | 0.816209 | 6.220679e-52 | -8.615850e-47 |
| Msa0864470 | Msa1438700 | -0.813356 | 2.667475e-51 | -8.615850e-47 |
| Msa0869120 | Msa1438700 | 0.818390 | 2.010150e-52 | -8.615850e-47 |
| Msa0874500 | Msa1438700 | 0.816433 | 5.543197e-52 | -8.615850e-47 |
| Msa0876200 | Msa1438700 | 0.803825 | 2.898234e-49 | -8.615850e-47 |
| Msa0876580 | Msa1438700 | 0.807287 | 5.442060e-50 | -8.615850e-47 |
| Msa0879860 | Msa1438700 | 0.801850 | 7.411586e-49 | -8.615850e-47 |
| Msa0909000 | Msa1438700 | -0.809078 | 2.260563e-50 | -8.615850e-47 |
| Msa0913480 | Msa1438700 | -0.802059 | 6.715515e-49 | -8.615850e-47 |
| Msa0930460 | Msa1438700 | -0.810833 | 9.470473e-51 | -8.615850e-47 |
| Msa0935850 | Msa1438700 | 0.808786 | 2.609806e-50 | -8.615850e-47 |
| Msa0937330 | Msa1438700 | 0.814390 | 1.578381e-51 | -8.615850e-47 |
| Msa0947760 | Msa1438700 | 0.804506 | 2.090871e-49 | -8.615850e-47 |
| Msa0971020 | Msa1438700 | 0.810232 | 1.276639e-50 | -8.615850e-47 |
| Msa0974630 | Msa1438700 | 0.819374 | 1.201320e-52 | -8.615850e-47 |
| Msa0976250 | Msa1438700 | 0.809901 | 1.504785e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438700 | MtrunA17_Chr3g0109561 | 98.780 | 82 | 1 | 0 | 1 | 82 | 1 | 82 | 7.09e-55 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1438700 | AT4G21192.1 | 75.000 | 80 | 20 | 0 | 1 | 80 | 1 | 80 | 3.39e-42 | 132 |
| Msa1438700 | AT4G21192.2 | 75.000 | 80 | 20 | 0 | 1 | 80 | 1 | 80 | 3.39e-42 | 132 |
Find 38 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACATGTTCCTTCATTATC+AGG | 0.186242 | tig0028615:+22991 | None:intergenic |
| AAAATTTAATGTAACATATT+GGG | 0.235555 | tig0028615:-23136 | Msa1438700:three_prime_UTR |
| CATCCTATTGCAAAATTCTT+TGG | 0.235808 | tig0028615:-23743 | Msa1438700:CDS |
| ATTAGACAAATTTACAATTC+AGG | 0.239321 | tig0028615:-25217 | None:intergenic |
| TACAGAATTGAAAATAAAAT+TGG | 0.247760 | tig0028615:-23714 | Msa1438700:CDS |
| AGACCAAATTTCTAGTATTT+AGG | 0.278311 | tig0028615:-23194 | Msa1438700:three_prime_UTR |
| GGATGTTTGTGCAATGTTAA+AGG | 0.281917 | tig0028615:+24487 | None:intergenic |
| GTGCCTAAATACTAGAAATT+TGG | 0.309764 | tig0028615:+23191 | None:intergenic |
| CCTGGAGAAGGGAAAGAAAA+TGG | 0.310262 | tig0028615:+25176 | None:intergenic |
| TCAGATACCTATCATATAAT+AGG | 0.331996 | tig0028615:-23262 | Msa1438700:three_prime_UTR |
| TGAATTGCAGGAGAAGGTTT+TGG | 0.348646 | tig0028615:-24543 | Msa1438700:five_prime_UTR |
| TAGTGGGATAGTTGAATTGC+AGG | 0.380257 | tig0028615:-24555 | Msa1438700:intron |
| TTAGACAAATTTACAATTCA+GGG | 0.384978 | tig0028615:-25216 | None:intergenic |
| ACATCATCCTATTATATGAT+AGG | 0.413026 | tig0028615:+23255 | None:intergenic |
| CAGCAGTCAATAGAAATAGA+AGG | 0.433741 | tig0028615:-23466 | Msa1438700:exon |
| AAAGCCATTATACAAAACTA+AGG | 0.469743 | tig0028615:+23323 | None:intergenic |
| AACATGTTCCTTCATTATCA+GGG | 0.488395 | tig0028615:+22992 | None:intergenic |
| GTGTGCAAGCACTATACATT+TGG | 0.489849 | tig0028615:-23092 | Msa1438700:three_prime_UTR |
| GTGATTATACAAGACTAGTT+CGG | 0.492156 | tig0028615:+23218 | None:intergenic |
| AAATTTAATGTAACATATTG+GGG | 0.492689 | tig0028615:-23135 | Msa1438700:three_prime_UTR |
| CGAGCCATTGTACAAAACTA+AGG | 0.498044 | tig0028615:+23396 | None:intergenic |
| ATCAGAGTTTCAGATGATCC+TGG | 0.502693 | tig0028615:+25158 | None:intergenic |
| ACACATGGGTTAGCCTTGTA+TGG | 0.506872 | tig0028615:+23061 | None:intergenic |
| AGATGCAAAATTGCGATGGA+AGG | 0.540762 | tig0028615:+25130 | None:intergenic |
| GTTTCAGATGATCCTGGAGA+AGG | 0.550355 | tig0028615:+25164 | None:intergenic |
| ACAGAAAGCTGTGAAGAGAA+AGG | 0.562696 | tig0028615:-23556 | Msa1438700:intron |
| TTTCAGATGATCCTGGAGAA+GGG | 0.573076 | tig0028615:+25165 | None:intergenic |
| TGAAAAGAGCAAAGAACTCA+AGG | 0.575643 | tig0028615:-23526 | Msa1438700:CDS |
| GATAGTTGAATTGCAGGAGA+AGG | 0.577716 | tig0028615:-24549 | Msa1438700:intron |
| GATACCACCCCTGATAATGA+AGG | 0.582672 | tig0028615:-23000 | Msa1438700:three_prime_UTR |
| TACGAGATGCAAAATTGCGA+TGG | 0.584864 | tig0028615:+25126 | None:intergenic |
| TGTTCCTTCATTATCAGGGG+TGG | 0.590108 | tig0028615:+22996 | None:intergenic |
| GATGCAAAATTGCGATGGAA+GGG | 0.590702 | tig0028615:+25131 | None:intergenic |
| AAACTCACTTCAGCGCACAT+AGG | 0.624864 | tig0028615:+24466 | None:intergenic |
| ACATGTTCCTTCATTATCAG+GGG | 0.631126 | tig0028615:+22993 | None:intergenic |
| GTGCTTAATGCAGATTATCG+AGG | 0.641500 | tig0028615:-23789 | Msa1438700:intron |
| TGTTTGTGCAATGTTAAAGG+AGG | 0.660285 | tig0028615:+24490 | None:intergenic |
| GGAGTTTCAGAAGTGTCATG+TGG | 0.660393 | tig0028615:-23768 | Msa1438700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATAGTTTTTTCTTTT+TGG | + | tig0028615:23525-23544 | None:intergenic | 10.0% |
| !!! | AATTTTTATTATTATTAGAG+GGG | + | tig0028615:25048-25067 | None:intergenic | 10.0% |
| !! | AAAAATTTAATGTAACATAT+TGG | - | tig0028615:25061-25080 | Msa1438700:intron | 10.0% |
| !! | AAAATTTAATGTAACATATT+GGG | - | tig0028615:25062-25081 | Msa1438700:intron | 10.0% |
| !!! | TTTTTATAGTTTTTTCTTTT+TGG | + | tig0028615:23525-23544 | None:intergenic | 10.0% |
| !!! | AATTTTTATTATTATTAGAG+GGG | + | tig0028615:25048-25067 | None:intergenic | 10.0% |
| !! | AAAAATTTAATGTAACATAT+TGG | - | tig0028615:25061-25080 | Msa1438700:intron | 10.0% |
| !! | AAAATTTAATGTAACATATT+GGG | - | tig0028615:25062-25081 | Msa1438700:intron | 10.0% |
| !! | AAAAAAATCATTACTATTGA+GGG | + | tig0028615:23136-23155 | None:intergenic | 15.0% |
| !! | AAAAAAAATCATTACTATTG+AGG | + | tig0028615:23137-23156 | None:intergenic | 15.0% |
| !! | ACAAATACATGAAAAAAATT+GGG | + | tig0028615:23227-23246 | None:intergenic | 15.0% |
| !!! | TCCATTTTTTATTTTGTTTT+TGG | - | tig0028615:23583-23602 | Msa1438700:intron | 15.0% |
| !! | ACCAAAAACAAAATAAAAAA+TGG | + | tig0028615:23587-23606 | None:intergenic | 15.0% |
| !! | TACAGAATTGAAAATAAAAT+TGG | - | tig0028615:24484-24503 | Msa1438700:CDS | 15.0% |
| !! | GAACTTTAACATAAAAAATA+AGG | + | tig0028615:24563-24582 | None:intergenic | 15.0% |
| !!! | ATTTTTATTATTATTAGAGG+GGG | + | tig0028615:25047-25066 | None:intergenic | 15.0% |
| !! | AAATTTAATGTAACATATTG+GGG | - | tig0028615:25063-25082 | Msa1438700:intron | 15.0% |
| !! | AAAAAAATCATTACTATTGA+GGG | + | tig0028615:23136-23155 | None:intergenic | 15.0% |
| !! | AAAAAAAATCATTACTATTG+AGG | + | tig0028615:23137-23156 | None:intergenic | 15.0% |
| !! | ACAAATACATGAAAAAAATT+GGG | + | tig0028615:23227-23246 | None:intergenic | 15.0% |
| !!! | TCCATTTTTTATTTTGTTTT+TGG | - | tig0028615:23583-23602 | Msa1438700:intron | 15.0% |
| !! | ACCAAAAACAAAATAAAAAA+TGG | + | tig0028615:23587-23606 | None:intergenic | 15.0% |
| !! | TACAGAATTGAAAATAAAAT+TGG | - | tig0028615:24484-24503 | Msa1438700:CDS | 15.0% |
| !! | GAACTTTAACATAAAAAATA+AGG | + | tig0028615:24563-24582 | None:intergenic | 15.0% |
| !!! | ATTTTTATTATTATTAGAGG+GGG | + | tig0028615:25047-25066 | None:intergenic | 15.0% |
| !! | AAATTTAATGTAACATATTG+GGG | - | tig0028615:25063-25082 | Msa1438700:intron | 15.0% |
| !! | CACAAATACATGAAAAAAAT+TGG | + | tig0028615:23228-23247 | None:intergenic | 20.0% |
| !!! | AATTTTATATGGTTCTTGTA+TGG | + | tig0028615:23359-23378 | None:intergenic | 20.0% |
| !!! | TTAATGTTGGCAATTTTATA+TGG | + | tig0028615:23370-23389 | None:intergenic | 20.0% |
| !! | TTTGAATTGAACATAATAGT+GGG | - | tig0028615:23627-23646 | Msa1438700:intron | 20.0% |
| !! | TCATAAACAAAACCTTATAT+TGG | - | tig0028615:23917-23936 | Msa1438700:intron | 20.0% |
| !! | TTATATTGGAACATTGAAAT+GGG | - | tig0028615:23931-23950 | Msa1438700:intron | 20.0% |
| !!! | ATAACACTTGTTAGATTATT+TGG | - | tig0028615:24007-24026 | Msa1438700:intron | 20.0% |
| !!! | TAACACTTGTTAGATTATTT+GGG | - | tig0028615:24008-24027 | Msa1438700:intron | 20.0% |
| !!! | AATTGATTCTAAATCCATTA+TGG | + | tig0028615:24297-24316 | None:intergenic | 20.0% |
| !!! | GATAATTTATCTTTTTCCTT+TGG | - | tig0028615:24335-24354 | Msa1438700:intron | 20.0% |
| !! | ATGGAAAAAATTGATACATA+TGG | + | tig0028615:24841-24860 | None:intergenic | 20.0% |
| !!! | TTTTTATTATTATTAGAGGG+GGG | + | tig0028615:25046-25065 | None:intergenic | 20.0% |
| !! | CACAAATACATGAAAAAAAT+TGG | + | tig0028615:23228-23247 | None:intergenic | 20.0% |
| !!! | AATTTTATATGGTTCTTGTA+TGG | + | tig0028615:23359-23378 | None:intergenic | 20.0% |
| !!! | TTAATGTTGGCAATTTTATA+TGG | + | tig0028615:23370-23389 | None:intergenic | 20.0% |
| !! | TTTGAATTGAACATAATAGT+GGG | - | tig0028615:23627-23646 | Msa1438700:intron | 20.0% |
| !! | TCATAAACAAAACCTTATAT+TGG | - | tig0028615:23917-23936 | Msa1438700:intron | 20.0% |
| !! | TTATATTGGAACATTGAAAT+GGG | - | tig0028615:23931-23950 | Msa1438700:intron | 20.0% |
| !!! | ATAACACTTGTTAGATTATT+TGG | - | tig0028615:24007-24026 | Msa1438700:intron | 20.0% |
| !!! | TAACACTTGTTAGATTATTT+GGG | - | tig0028615:24008-24027 | Msa1438700:intron | 20.0% |
| !!! | AATTGATTCTAAATCCATTA+TGG | + | tig0028615:24297-24316 | None:intergenic | 20.0% |
| !!! | GATAATTTATCTTTTTCCTT+TGG | - | tig0028615:24335-24354 | Msa1438700:intron | 20.0% |
| !! | ATGGAAAAAATTGATACATA+TGG | + | tig0028615:24841-24860 | None:intergenic | 20.0% |
| !!! | TTTTTATTATTATTAGAGGG+GGG | + | tig0028615:25046-25065 | None:intergenic | 20.0% |
| ! | TTTACATGGCATATTAATGT+TGG | + | tig0028615:23383-23402 | None:intergenic | 25.0% |
| ! | CTTTGAATTGAACATAATAG+TGG | - | tig0028615:23626-23645 | Msa1438700:intron | 25.0% |
| ! | GAAATTAGTAGTTGAAAGTT+TGG | - | tig0028615:23894-23913 | Msa1438700:intron | 25.0% |
| ! | CATTTCAATGTTCCAATATA+AGG | + | tig0028615:23932-23951 | None:intergenic | 25.0% |
| ! | CTTATATTGGAACATTGAAA+TGG | - | tig0028615:23930-23949 | Msa1438700:intron | 25.0% |
| !! | TAAGGATTGTATTTTGCAAA+TGG | + | tig0028615:24860-24879 | None:intergenic | 25.0% |
| !!! | CAATCCTTAGTTTTGTATAA+TGG | - | tig0028615:24871-24890 | Msa1438700:intron | 25.0% |
| ! | AAAGCCATTATACAAAACTA+AGG | + | tig0028615:24878-24897 | None:intergenic | 25.0% |
| ! | TCAGATACCTATCATATAAT+AGG | - | tig0028615:24936-24955 | Msa1438700:intron | 25.0% |
| ! | ACATCATCCTATTATATGAT+AGG | + | tig0028615:24946-24965 | None:intergenic | 25.0% |
| !!! | AGACCAAATTTCTAGTATTT+AGG | - | tig0028615:25004-25023 | Msa1438700:intron | 25.0% |
| ! | TTTACATGGCATATTAATGT+TGG | + | tig0028615:23383-23402 | None:intergenic | 25.0% |
| ! | CTTTGAATTGAACATAATAG+TGG | - | tig0028615:23626-23645 | Msa1438700:intron | 25.0% |
| ! | GAAATTAGTAGTTGAAAGTT+TGG | - | tig0028615:23894-23913 | Msa1438700:intron | 25.0% |
| ! | CATTTCAATGTTCCAATATA+AGG | + | tig0028615:23932-23951 | None:intergenic | 25.0% |
| ! | CTTATATTGGAACATTGAAA+TGG | - | tig0028615:23930-23949 | Msa1438700:intron | 25.0% |
| !! | TAAGGATTGTATTTTGCAAA+TGG | + | tig0028615:24860-24879 | None:intergenic | 25.0% |
| !!! | CAATCCTTAGTTTTGTATAA+TGG | - | tig0028615:24871-24890 | Msa1438700:intron | 25.0% |
| ! | AAAGCCATTATACAAAACTA+AGG | + | tig0028615:24878-24897 | None:intergenic | 25.0% |
| ! | TCAGATACCTATCATATAAT+AGG | - | tig0028615:24936-24955 | Msa1438700:intron | 25.0% |
| ! | ACATCATCCTATTATATGAT+AGG | + | tig0028615:24946-24965 | None:intergenic | 25.0% |
| !!! | AGACCAAATTTCTAGTATTT+AGG | - | tig0028615:25004-25023 | Msa1438700:intron | 25.0% |
| TTTCAAGCATTTCATCAAAC+AGG | + | tig0028615:23183-23202 | None:intergenic | 30.0% | |
| CAAATTATAGCTCGTTTACA+TGG | + | tig0028615:23397-23416 | None:intergenic | 30.0% | |
| !!! | GTTTTTTCTTTTTGGAAACC+CGG | + | tig0028615:23517-23536 | None:intergenic | 30.0% |
| CATCCTATTGCAAAATTCTT+TGG | - | tig0028615:24455-24474 | Msa1438700:intron | 30.0% | |
| AGATGAAAATTACTTACCAC+AGG | + | tig0028615:24612-24631 | None:intergenic | 30.0% | |
| ! | TTCTTTGCTCTTTTCAAAGT+TGG | + | tig0028615:24668-24687 | None:intergenic | 30.0% |
| !!! | CAATCCTTAGTTTTGTACAA+TGG | - | tig0028615:24798-24817 | Msa1438700:intron | 30.0% |
| ! | GTGATTATACAAGACTAGTT+CGG | + | tig0028615:24983-25002 | None:intergenic | 30.0% |
| GTGCCTAAATACTAGAAATT+TGG | + | tig0028615:25010-25029 | None:intergenic | 30.0% | |
| TTACAGAAAAAGTGACACAT+GGG | + | tig0028615:25154-25173 | None:intergenic | 30.0% | |
| ATTACAGAAAAAGTGACACA+TGG | + | tig0028615:25155-25174 | None:intergenic | 30.0% | |
| AACATGTTCCTTCATTATCA+GGG | + | tig0028615:25209-25228 | None:intergenic | 30.0% | |
| AAACATGTTCCTTCATTATC+AGG | + | tig0028615:25210-25229 | None:intergenic | 30.0% | |
| TTTCAAGCATTTCATCAAAC+AGG | + | tig0028615:23183-23202 | None:intergenic | 30.0% | |
| CAAATTATAGCTCGTTTACA+TGG | + | tig0028615:23397-23416 | None:intergenic | 30.0% | |
| !!! | GTTTTTTCTTTTTGGAAACC+CGG | + | tig0028615:23517-23536 | None:intergenic | 30.0% |
| CATCCTATTGCAAAATTCTT+TGG | - | tig0028615:24455-24474 | Msa1438700:intron | 30.0% | |
| AGATGAAAATTACTTACCAC+AGG | + | tig0028615:24612-24631 | None:intergenic | 30.0% | |
| ! | TTCTTTGCTCTTTTCAAAGT+TGG | + | tig0028615:24668-24687 | None:intergenic | 30.0% |
| !!! | CAATCCTTAGTTTTGTACAA+TGG | - | tig0028615:24798-24817 | Msa1438700:intron | 30.0% |
| ! | GTGATTATACAAGACTAGTT+CGG | + | tig0028615:24983-25002 | None:intergenic | 30.0% |
| GTGCCTAAATACTAGAAATT+TGG | + | tig0028615:25010-25029 | None:intergenic | 30.0% | |
| TTACAGAAAAAGTGACACAT+GGG | + | tig0028615:25154-25173 | None:intergenic | 30.0% | |
| ATTACAGAAAAAGTGACACA+TGG | + | tig0028615:25155-25174 | None:intergenic | 30.0% | |
| AACATGTTCCTTCATTATCA+GGG | + | tig0028615:25209-25228 | None:intergenic | 30.0% | |
| AAACATGTTCCTTCATTATC+AGG | + | tig0028615:25210-25229 | None:intergenic | 30.0% | |
| GGAAAAAACGCGTATAAAAG+TGG | + | tig0028615:23115-23134 | None:intergenic | 35.0% | |
| GATGAAATGCTTGAAACATG+CGG | - | tig0028615:23187-23206 | Msa1438700:three_prime_UTR | 35.0% | |
| ! | GATGTCTTTAGAAGCACAAA+GGG | + | tig0028615:23254-23273 | None:intergenic | 35.0% |
| ! | TGATGTCTTTAGAAGCACAA+AGG | + | tig0028615:23255-23274 | None:intergenic | 35.0% |
| TGGTTCTTGTATGGAATATC+AGG | + | tig0028615:23350-23369 | None:intergenic | 35.0% | |
| !! | GAAGGTTTTGGTGATTGATT+TGG | - | tig0028615:23667-23686 | Msa1438700:intron | 35.0% |
| TGTTTGTGCAATGTTAAAGG+AGG | + | tig0028615:23711-23730 | None:intergenic | 35.0% | |
| GGATGTTTGTGCAATGTTAA+AGG | + | tig0028615:23714-23733 | None:intergenic | 35.0% | |
| ATATTTCCATGTCCATGTCA+TGG | - | tig0028615:23864-23883 | Msa1438700:intron | 35.0% | |
| TATTTCCATGTCCATGTCAT+GGG | - | tig0028615:23865-23884 | Msa1438700:intron | 35.0% | |
| ATTTCCATTATCCCATGACA+TGG | + | tig0028615:23879-23898 | None:intergenic | 35.0% | |
| GAACATTGAAATGGGACTTA+GGG | - | tig0028615:23939-23958 | Msa1438700:intron | 35.0% | |
| AACATTGAAATGGGACTTAG+GGG | - | tig0028615:23940-23959 | Msa1438700:intron | 35.0% | |
| TAAGGAAATGCCAATTGACA+GGG | + | tig0028615:24264-24283 | None:intergenic | 35.0% | |
| ! | TCGCCAAAGAATTTTGCAAT+AGG | + | tig0028615:24461-24480 | None:intergenic | 35.0% |
| !! | CTTTGCTTTGAAGTTTGATC+TGG | - | tig0028615:24582-24601 | Msa1438700:intron | 35.0% |
| TGAAAAGAGCAAAGAACTCA+AGG | - | tig0028615:24672-24691 | Msa1438700:intron | 35.0% | |
| ! | AGGAACAATTGCGAGTTTTA+AGG | - | tig0028615:24692-24711 | Msa1438700:intron | 35.0% |
| CAGCAGTCAATAGAAATAGA+AGG | - | tig0028615:24732-24751 | Msa1438700:intron | 35.0% | |
| !!! | TTTGGTTTTGTGACCATACA+AGG | - | tig0028615:25124-25143 | Msa1438700:intron | 35.0% |
| ACATGTTCCTTCATTATCAG+GGG | + | tig0028615:25208-25227 | None:intergenic | 35.0% | |
| GGAAAAAACGCGTATAAAAG+TGG | + | tig0028615:23115-23134 | None:intergenic | 35.0% | |
| GATGAAATGCTTGAAACATG+CGG | - | tig0028615:23187-23206 | Msa1438700:three_prime_UTR | 35.0% | |
| ! | GATGTCTTTAGAAGCACAAA+GGG | + | tig0028615:23254-23273 | None:intergenic | 35.0% |
| ! | TGATGTCTTTAGAAGCACAA+AGG | + | tig0028615:23255-23274 | None:intergenic | 35.0% |
| TGGTTCTTGTATGGAATATC+AGG | + | tig0028615:23350-23369 | None:intergenic | 35.0% | |
| !! | GAAGGTTTTGGTGATTGATT+TGG | - | tig0028615:23667-23686 | Msa1438700:intron | 35.0% |
| TGTTTGTGCAATGTTAAAGG+AGG | + | tig0028615:23711-23730 | None:intergenic | 35.0% | |
| GGATGTTTGTGCAATGTTAA+AGG | + | tig0028615:23714-23733 | None:intergenic | 35.0% | |
| ATATTTCCATGTCCATGTCA+TGG | - | tig0028615:23864-23883 | Msa1438700:intron | 35.0% | |
| TATTTCCATGTCCATGTCAT+GGG | - | tig0028615:23865-23884 | Msa1438700:intron | 35.0% | |
| ATTTCCATTATCCCATGACA+TGG | + | tig0028615:23879-23898 | None:intergenic | 35.0% | |
| GAACATTGAAATGGGACTTA+GGG | - | tig0028615:23939-23958 | Msa1438700:intron | 35.0% | |
| AACATTGAAATGGGACTTAG+GGG | - | tig0028615:23940-23959 | Msa1438700:intron | 35.0% | |
| TAAGGAAATGCCAATTGACA+GGG | + | tig0028615:24264-24283 | None:intergenic | 35.0% | |
| ! | TCGCCAAAGAATTTTGCAAT+AGG | + | tig0028615:24461-24480 | None:intergenic | 35.0% |
| !! | CTTTGCTTTGAAGTTTGATC+TGG | - | tig0028615:24582-24601 | Msa1438700:intron | 35.0% |
| TGAAAAGAGCAAAGAACTCA+AGG | - | tig0028615:24672-24691 | Msa1438700:intron | 35.0% | |
| ! | AGGAACAATTGCGAGTTTTA+AGG | - | tig0028615:24692-24711 | Msa1438700:intron | 35.0% |
| CAGCAGTCAATAGAAATAGA+AGG | - | tig0028615:24732-24751 | Msa1438700:intron | 35.0% | |
| !!! | TTTGGTTTTGTGACCATACA+AGG | - | tig0028615:25124-25143 | Msa1438700:intron | 35.0% |
| ACATGTTCCTTCATTATCAG+GGG | + | tig0028615:25208-25227 | None:intergenic | 35.0% | |
| TTTCAGATGATCCTGGAGAA+GGG | + | tig0028615:23036-23055 | None:intergenic | 40.0% | |
| ATCAGAGTTTCAGATGATCC+TGG | + | tig0028615:23043-23062 | None:intergenic | 40.0% | |
| GATGCAAAATTGCGATGGAA+GGG | + | tig0028615:23070-23089 | None:intergenic | 40.0% | |
| AGATGCAAAATTGCGATGGA+AGG | + | tig0028615:23071-23090 | None:intergenic | 40.0% | |
| TACGAGATGCAAAATTGCGA+TGG | + | tig0028615:23075-23094 | None:intergenic | 40.0% | |
| TGATGAGCACAAACAAAGCT+TGG | + | tig0028615:23160-23179 | None:intergenic | 40.0% | |
| TGTGCGAACAATTCCTATGT+TGG | - | tig0028615:23422-23441 | Msa1438700:three_prime_UTR | 40.0% | |
| GTGCGAACAATTCCTATGTT+GGG | - | tig0028615:23423-23442 | Msa1438700:three_prime_UTR | 40.0% | |
| !! | AATTGGTCCTCTGGATTAGT+GGG | - | tig0028615:23476-23495 | Msa1438700:CDS | 40.0% |
| TCAAGACTAAAAGTAGCTGC+TGG | - | tig0028615:23554-23573 | Msa1438700:CDS | 40.0% | |
| TAGTGGGATAGTTGAATTGC+AGG | - | tig0028615:23643-23662 | Msa1438700:intron | 40.0% | |
| GATAGTTGAATTGCAGGAGA+AGG | - | tig0028615:23649-23668 | Msa1438700:intron | 40.0% | |
| ! | TGAATTGCAGGAGAAGGTTT+TGG | - | tig0028615:23655-23674 | Msa1438700:intron | 40.0% |
| ATTATCCCATGACATGGACA+TGG | + | tig0028615:23873-23892 | None:intergenic | 40.0% | |
| ATGTCCATGTCATGGGATAA+TGG | - | tig0028615:23872-23891 | Msa1438700:intron | 40.0% | |
| GGAACATTGAAATGGGACTT+AGG | - | tig0028615:23938-23957 | Msa1438700:intron | 40.0% | |
| AAATGGGACTTAGGGGAATA+GGG | - | tig0028615:23947-23966 | Msa1438700:intron | 40.0% | |
| CAATACCTCTTAGTGGCTTA+AGG | + | tig0028615:24224-24243 | None:intergenic | 40.0% | |
| TTATCTGTTGCCCTGTCAAT+TGG | - | tig0028615:24251-24270 | Msa1438700:intron | 40.0% | |
| GTAAGGAAATGCCAATTGAC+AGG | + | tig0028615:24265-24284 | None:intergenic | 40.0% | |
| CATTATGGAGTGCGAAAGTA+AGG | + | tig0028615:24282-24301 | None:intergenic | 40.0% | |
| CTTACTTTCGCACTCCATAA+TGG | - | tig0028615:24280-24299 | Msa1438700:intron | 40.0% | |
| CTGATAACTTTCAGCACCAA+AGG | + | tig0028615:24354-24373 | None:intergenic | 40.0% | |
| !! | CTTTGGTGCTGAAAGTTATC+AGG | - | tig0028615:24352-24371 | Msa1438700:intron | 40.0% |
| GTGCTTAATGCAGATTATCG+AGG | - | tig0028615:24409-24428 | Msa1438700:intron | 40.0% | |
| !!! | AGTTTGATCTGGTTTTCCTG+TGG | - | tig0028615:24593-24612 | Msa1438700:intron | 40.0% |
| TTCTCTTCACAGCTTTCTGT+TGG | + | tig0028615:24642-24661 | None:intergenic | 40.0% | |
| ACAGAAAGCTGTGAAGAGAA+AGG | - | tig0028615:24642-24661 | Msa1438700:intron | 40.0% | |
| CGAGCCATTGTACAAAACTA+AGG | + | tig0028615:24805-24824 | None:intergenic | 40.0% | |
| GTGTGCAAGCACTATACATT+TGG | - | tig0028615:25106-25125 | Msa1438700:intron | 40.0% | |
| TTTCAGATGATCCTGGAGAA+GGG | + | tig0028615:23036-23055 | None:intergenic | 40.0% | |
| ATCAGAGTTTCAGATGATCC+TGG | + | tig0028615:23043-23062 | None:intergenic | 40.0% | |
| GATGCAAAATTGCGATGGAA+GGG | + | tig0028615:23070-23089 | None:intergenic | 40.0% | |
| AGATGCAAAATTGCGATGGA+AGG | + | tig0028615:23071-23090 | None:intergenic | 40.0% | |
| TACGAGATGCAAAATTGCGA+TGG | + | tig0028615:23075-23094 | None:intergenic | 40.0% | |
| TGATGAGCACAAACAAAGCT+TGG | + | tig0028615:23160-23179 | None:intergenic | 40.0% | |
| TGTGCGAACAATTCCTATGT+TGG | - | tig0028615:23422-23441 | Msa1438700:three_prime_UTR | 40.0% | |
| GTGCGAACAATTCCTATGTT+GGG | - | tig0028615:23423-23442 | Msa1438700:three_prime_UTR | 40.0% | |
| !! | AATTGGTCCTCTGGATTAGT+GGG | - | tig0028615:23476-23495 | Msa1438700:CDS | 40.0% |
| TCAAGACTAAAAGTAGCTGC+TGG | - | tig0028615:23554-23573 | Msa1438700:CDS | 40.0% | |
| TAGTGGGATAGTTGAATTGC+AGG | - | tig0028615:23643-23662 | Msa1438700:intron | 40.0% | |
| GATAGTTGAATTGCAGGAGA+AGG | - | tig0028615:23649-23668 | Msa1438700:intron | 40.0% | |
| ! | TGAATTGCAGGAGAAGGTTT+TGG | - | tig0028615:23655-23674 | Msa1438700:intron | 40.0% |
| ATTATCCCATGACATGGACA+TGG | + | tig0028615:23873-23892 | None:intergenic | 40.0% | |
| ATGTCCATGTCATGGGATAA+TGG | - | tig0028615:23872-23891 | Msa1438700:intron | 40.0% | |
| GGAACATTGAAATGGGACTT+AGG | - | tig0028615:23938-23957 | Msa1438700:intron | 40.0% | |
| AAATGGGACTTAGGGGAATA+GGG | - | tig0028615:23947-23966 | Msa1438700:intron | 40.0% | |
| CAATACCTCTTAGTGGCTTA+AGG | + | tig0028615:24224-24243 | None:intergenic | 40.0% | |
| TTATCTGTTGCCCTGTCAAT+TGG | - | tig0028615:24251-24270 | Msa1438700:intron | 40.0% | |
| GTAAGGAAATGCCAATTGAC+AGG | + | tig0028615:24265-24284 | None:intergenic | 40.0% | |
| CATTATGGAGTGCGAAAGTA+AGG | + | tig0028615:24282-24301 | None:intergenic | 40.0% | |
| CTTACTTTCGCACTCCATAA+TGG | - | tig0028615:24280-24299 | Msa1438700:intron | 40.0% | |
| CTGATAACTTTCAGCACCAA+AGG | + | tig0028615:24354-24373 | None:intergenic | 40.0% | |
| !! | CTTTGGTGCTGAAAGTTATC+AGG | - | tig0028615:24352-24371 | Msa1438700:intron | 40.0% |
| GTGCTTAATGCAGATTATCG+AGG | - | tig0028615:24409-24428 | Msa1438700:intron | 40.0% | |
| !!! | AGTTTGATCTGGTTTTCCTG+TGG | - | tig0028615:24593-24612 | Msa1438700:intron | 40.0% |
| TTCTCTTCACAGCTTTCTGT+TGG | + | tig0028615:24642-24661 | None:intergenic | 40.0% | |
| ACAGAAAGCTGTGAAGAGAA+AGG | - | tig0028615:24642-24661 | Msa1438700:intron | 40.0% | |
| CGAGCCATTGTACAAAACTA+AGG | + | tig0028615:24805-24824 | None:intergenic | 40.0% | |
| GTGTGCAAGCACTATACATT+TGG | - | tig0028615:25106-25125 | Msa1438700:intron | 40.0% | |
| CCTGGAGAAGGGAAAGAAAA+TGG | + | tig0028615:23025-23044 | None:intergenic | 45.0% | |
| ! | CCATTTTCTTTCCCTTCTCC+AGG | - | tig0028615:23022-23041 | Msa1438700:three_prime_UTR | 45.0% |
| GTTTCAGATGATCCTGGAGA+AGG | + | tig0028615:23037-23056 | None:intergenic | 45.0% | |
| ! | TGTATGGACTGACCCAACAT+AGG | + | tig0028615:23438-23457 | None:intergenic | 45.0% |
| AGACAGAGCAACGTCTTGTA+TGG | + | tig0028615:23454-23473 | None:intergenic | 45.0% | |
| GACGTTGCTCTGTCTTCAAT+TGG | - | tig0028615:23459-23478 | Msa1438700:exon | 45.0% | |
| TCTGTCTTCAATTGGTCCTC+TGG | - | tig0028615:23467-23486 | Msa1438700:exon | 45.0% | |
| ! | CAATTGGTCCTCTGGATTAG+TGG | - | tig0028615:23475-23494 | Msa1438700:exon | 45.0% |
| AAACTCACTTCAGCGCACAT+AGG | + | tig0028615:23735-23754 | None:intergenic | 45.0% | |
| GAAATGGGACTTAGGGGAAT+AGG | - | tig0028615:23946-23965 | Msa1438700:intron | 45.0% | |
| ACCAAGCTGTTTACCCAAAC+AGG | - | tig0028615:24197-24216 | Msa1438700:intron | 45.0% | |
| CCAAGCTGTTTACCCAAACA+GGG | - | tig0028615:24198-24217 | Msa1438700:intron | 45.0% | |
| !! | CCACTAAGAGGTATTGCCAA+GGG | - | tig0028615:24228-24247 | Msa1438700:intron | 45.0% |
| !! | GGAGTTTCAGAAGTGTCATG+TGG | - | tig0028615:24430-24449 | Msa1438700:intron | 45.0% |
| !! | ACACATGGGTTAGCCTTGTA+TGG | + | tig0028615:25140-25159 | None:intergenic | 45.0% |
| ! | GATACCACCCCTGATAATGA+AGG | - | tig0028615:25198-25217 | Msa1438700:five_prime_UTR | 45.0% |
| TGTTCCTTCATTATCAGGGG+TGG | + | tig0028615:25205-25224 | None:intergenic | 45.0% | |
| CCTGGAGAAGGGAAAGAAAA+TGG | + | tig0028615:23025-23044 | None:intergenic | 45.0% | |
| ! | CCATTTTCTTTCCCTTCTCC+AGG | - | tig0028615:23022-23041 | Msa1438700:three_prime_UTR | 45.0% |
| GTTTCAGATGATCCTGGAGA+AGG | + | tig0028615:23037-23056 | None:intergenic | 45.0% | |
| ! | TGTATGGACTGACCCAACAT+AGG | + | tig0028615:23438-23457 | None:intergenic | 45.0% |
| AGACAGAGCAACGTCTTGTA+TGG | + | tig0028615:23454-23473 | None:intergenic | 45.0% | |
| GACGTTGCTCTGTCTTCAAT+TGG | - | tig0028615:23459-23478 | Msa1438700:exon | 45.0% | |
| TCTGTCTTCAATTGGTCCTC+TGG | - | tig0028615:23467-23486 | Msa1438700:exon | 45.0% | |
| ! | CAATTGGTCCTCTGGATTAG+TGG | - | tig0028615:23475-23494 | Msa1438700:exon | 45.0% |
| AAACTCACTTCAGCGCACAT+AGG | + | tig0028615:23735-23754 | None:intergenic | 45.0% | |
| GAAATGGGACTTAGGGGAAT+AGG | - | tig0028615:23946-23965 | Msa1438700:intron | 45.0% | |
| ACCAAGCTGTTTACCCAAAC+AGG | - | tig0028615:24197-24216 | Msa1438700:intron | 45.0% | |
| CCAAGCTGTTTACCCAAACA+GGG | - | tig0028615:24198-24217 | Msa1438700:intron | 45.0% | |
| !! | CCACTAAGAGGTATTGCCAA+GGG | - | tig0028615:24228-24247 | Msa1438700:intron | 45.0% |
| !! | GGAGTTTCAGAAGTGTCATG+TGG | - | tig0028615:24430-24449 | Msa1438700:intron | 45.0% |
| !! | ACACATGGGTTAGCCTTGTA+TGG | + | tig0028615:25140-25159 | None:intergenic | 45.0% |
| ! | GATACCACCCCTGATAATGA+AGG | - | tig0028615:25198-25217 | Msa1438700:five_prime_UTR | 45.0% |
| TGTTCCTTCATTATCAGGGG+TGG | + | tig0028615:25205-25224 | None:intergenic | 45.0% | |
| !!! | AAATTTTTATTATTATTAGA+GGG | + | tig0028615:25049-25068 | None:intergenic | 5.0% |
| !!! | TAAATTTTTATTATTATTAG+AGG | + | tig0028615:25050-25069 | None:intergenic | 5.0% |
| !!! | AAATTTTTATTATTATTAGA+GGG | + | tig0028615:25049-25068 | None:intergenic | 5.0% |
| !!! | TAAATTTTTATTATTATTAG+AGG | + | tig0028615:25050-25069 | None:intergenic | 5.0% |
| ! | GGATTAGTGGGTCCTTGGAT+TGG | - | tig0028615:23488-23507 | Msa1438700:CDS | 50.0% |
| ! | TGGGTCCTTGGATTGGATAC+CGG | - | tig0028615:23495-23514 | Msa1438700:CDS | 50.0% |
| GAAACCCGGTATCCAATCCA+AGG | + | tig0028615:23503-23522 | None:intergenic | 50.0% | |
| CCCTGTTTGGGTAAACAGCT+TGG | + | tig0028615:24201-24220 | None:intergenic | 50.0% | |
| AGTGGCTTAAGGCCCTGTTT+GGG | + | tig0028615:24213-24232 | None:intergenic | 50.0% | |
| TAGTGGCTTAAGGCCCTGTT+TGG | + | tig0028615:24214-24233 | None:intergenic | 50.0% | |
| !! | GCCACTAAGAGGTATTGCCA+AGG | - | tig0028615:24227-24246 | Msa1438700:intron | 50.0% |
| CCCTTGGCAATACCTCTTAG+TGG | + | tig0028615:24231-24250 | None:intergenic | 50.0% | |
| ACAGGGCAACAGATAACCCT+TGG | + | tig0028615:24247-24266 | None:intergenic | 50.0% | |
| ! | GGATTAGTGGGTCCTTGGAT+TGG | - | tig0028615:23488-23507 | Msa1438700:CDS | 50.0% |
| ! | TGGGTCCTTGGATTGGATAC+CGG | - | tig0028615:23495-23514 | Msa1438700:CDS | 50.0% |
| GAAACCCGGTATCCAATCCA+AGG | + | tig0028615:23503-23522 | None:intergenic | 50.0% | |
| CCCTGTTTGGGTAAACAGCT+TGG | + | tig0028615:24201-24220 | None:intergenic | 50.0% | |
| AGTGGCTTAAGGCCCTGTTT+GGG | + | tig0028615:24213-24232 | None:intergenic | 50.0% | |
| TAGTGGCTTAAGGCCCTGTT+TGG | + | tig0028615:24214-24233 | None:intergenic | 50.0% | |
| !! | GCCACTAAGAGGTATTGCCA+AGG | - | tig0028615:24227-24246 | Msa1438700:intron | 50.0% |
| CCCTTGGCAATACCTCTTAG+TGG | + | tig0028615:24231-24250 | None:intergenic | 50.0% | |
| ACAGGGCAACAGATAACCCT+TGG | + | tig0028615:24247-24266 | None:intergenic | 50.0% | |
| CCAAGGACCCACTAATCCAG+AGG | + | tig0028615:23486-23505 | None:intergenic | 55.0% | |
| !! | CCTCTGGATTAGTGGGTCCT+TGG | - | tig0028615:23483-23502 | Msa1438700:CDS | 55.0% |
| ! | GGGTCCTTGGATTGGATACC+GGG | - | tig0028615:23496-23515 | Msa1438700:CDS | 55.0% |
| CAGGGCCTTAAGCCACTAAG+AGG | - | tig0028615:24216-24235 | Msa1438700:intron | 55.0% | |
| CCAAGGACCCACTAATCCAG+AGG | + | tig0028615:23486-23505 | None:intergenic | 55.0% | |
| !! | CCTCTGGATTAGTGGGTCCT+TGG | - | tig0028615:23483-23502 | Msa1438700:CDS | 55.0% |
| ! | GGGTCCTTGGATTGGATACC+GGG | - | tig0028615:23496-23515 | Msa1438700:CDS | 55.0% |
| CAGGGCCTTAAGCCACTAAG+AGG | - | tig0028615:24216-24235 | Msa1438700:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0028615 | gene | 22987 | 25233 | 22987 | ID=Msa1438700;Name=Msa1438700 |
| tig0028615 | mRNA | 22987 | 25233 | 22987 | ID=Msa1438700-mRNA-1;Parent=Msa1438700;Name=Msa1438700-mRNA-1;_AED=0.01;_eAED=0.01;_QI=153|1|1|1|0.66|0.5|4|489|82 |
| tig0028615 | exon | 22987 | 23574 | 22987 | ID=Msa1438700-mRNA-1:exon:11387;Parent=Msa1438700-mRNA-1 |
| tig0028615 | exon | 23694 | 23798 | 23694 | ID=Msa1438700-mRNA-1:exon:11386;Parent=Msa1438700-mRNA-1 |
| tig0028615 | exon | 24474 | 24566 | 24474 | ID=Msa1438700-mRNA-1:exon:11385;Parent=Msa1438700-mRNA-1 |
| tig0028615 | exon | 25129 | 25233 | 25129 | ID=Msa1438700-mRNA-1:exon:11384;Parent=Msa1438700-mRNA-1 |
| tig0028615 | five_prime_UTR | 25129 | 25233 | 25129 | ID=Msa1438700-mRNA-1:five_prime_utr;Parent=Msa1438700-mRNA-1 |
| tig0028615 | five_prime_UTR | 24519 | 24566 | 24519 | ID=Msa1438700-mRNA-1:five_prime_utr;Parent=Msa1438700-mRNA-1 |
| tig0028615 | CDS | 24474 | 24518 | 24474 | ID=Msa1438700-mRNA-1:cds;Parent=Msa1438700-mRNA-1 |
| tig0028615 | CDS | 23694 | 23798 | 23694 | ID=Msa1438700-mRNA-1:cds;Parent=Msa1438700-mRNA-1 |
| tig0028615 | CDS | 23476 | 23574 | 23476 | ID=Msa1438700-mRNA-1:cds;Parent=Msa1438700-mRNA-1 |
| tig0028615 | three_prime_UTR | 22987 | 23475 | 22987 | ID=Msa1438700-mRNA-1:three_prime_utr;Parent=Msa1438700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
