Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669410 | GAU20217.1 | 54.558 | 746 | 327 | 3 | 79 | 816 | 3 | 744 | 0.0 | 872 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669410 | sp|Q9SZL8|FRS5_ARATH | 30.068 | 592 | 397 | 9 | 128 | 706 | 69 | 656 | 2.22e-88 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669410 | A0A445I407 | 48.941 | 803 | 387 | 6 | 28 | 827 | 37 | 819 | 0.0 | 793 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0669410 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa0669410 | 0.800956 | 1.129675e-48 | -8.615850e-47 |
| Msa0006110 | Msa0669410 | 0.836473 | 9.166418e-57 | -8.615850e-47 |
| Msa0006390 | Msa0669410 | 0.813171 | 2.929620e-51 | -8.615850e-47 |
| Msa0009180 | Msa0669410 | 0.809475 | 1.858224e-50 | -8.615850e-47 |
| Msa0015390 | Msa0669410 | 0.817805 | 2.725997e-52 | -8.615850e-47 |
| Msa0021210 | Msa0669410 | 0.828623 | 8.110750e-55 | -8.615850e-47 |
| Msa0026910 | Msa0669410 | 0.828543 | 8.480845e-55 | -8.615850e-47 |
| Msa0036140 | Msa0669410 | 0.805330 | 1.406084e-49 | -8.615850e-47 |
| Msa0044000 | Msa0669410 | 0.810347 | 1.205814e-50 | -8.615850e-47 |
| Msa0044090 | Msa0669410 | 0.805101 | 1.570407e-49 | -8.615850e-47 |
| Msa0058160 | Msa0669410 | 0.800833 | 1.197210e-48 | -8.615850e-47 |
| Msa0068740 | Msa0669410 | -0.814078 | 1.850300e-51 | -8.615850e-47 |
| Msa0076220 | Msa0669410 | 0.803913 | 2.777960e-49 | -8.615850e-47 |
| Msa0079070 | Msa0669410 | 0.818218 | 2.198748e-52 | -8.615850e-47 |
| Msa0084380 | Msa0669410 | 0.800366 | 1.490980e-48 | -8.615850e-47 |
| Msa0095560 | Msa0669410 | 0.800021 | 1.752251e-48 | -8.615850e-47 |
| Msa0105260 | Msa0669410 | 0.806918 | 6.512398e-50 | -8.615850e-47 |
| Msa0114430 | Msa0669410 | 0.849841 | 2.495380e-60 | -8.615850e-47 |
| Msa0607910 | Msa0669410 | 0.819437 | 1.162262e-52 | -8.615850e-47 |
| Msa0610880 | Msa0669410 | 0.846831 | 1.696713e-59 | -8.615850e-47 |
| Msa0624470 | Msa0669410 | 0.803643 | 3.161210e-49 | -8.615850e-47 |
| Msa0626360 | Msa0669410 | 0.827534 | 1.483658e-54 | -8.615850e-47 |
| Msa0652940 | Msa0669410 | 0.800273 | 1.557467e-48 | -8.615850e-47 |
| Msa0654310 | Msa0669410 | 0.831978 | 1.228570e-55 | -8.615850e-47 |
| Msa0663240 | Msa0669410 | 0.818791 | 1.630496e-52 | -8.615850e-47 |
| Msa0669410 | Msa0673120 | 0.807618 | 4.628054e-50 | -8.615850e-47 |
| Msa0669410 | Msa0676180 | 0.800210 | 1.603981e-48 | -8.615850e-47 |
| Msa0669410 | Msa0681270 | 0.805214 | 1.487134e-49 | -8.615850e-47 |
| Msa0669410 | Msa0685090 | 0.814125 | 1.806296e-51 | -8.615850e-47 |
| Msa0669410 | Msa0688480 | 0.824610 | 7.352163e-54 | -8.615850e-47 |
| Msa0669410 | Msa0722720 | 0.818538 | 1.860789e-52 | -8.615850e-47 |
| Msa0669410 | Msa0731940 | 0.800030 | 1.744508e-48 | -8.615850e-47 |
| Msa0669410 | Msa0740510 | 0.803923 | 2.764972e-49 | -8.615850e-47 |
| Msa0669410 | Msa0745260 | -0.817662 | 2.935815e-52 | -8.615850e-47 |
| Msa0669410 | Msa0748970 | 0.803031 | 4.231777e-49 | -8.615850e-47 |
| Msa0669410 | Msa0766630 | 0.800820 | 1.204527e-48 | -8.615850e-47 |
| Msa0669410 | Msa0773850 | 0.828569 | 8.358114e-55 | -8.615850e-47 |
| Msa0669410 | Msa0787120 | 0.813913 | 2.012224e-51 | -8.615850e-47 |
| Msa0669410 | Msa0797770 | 0.804954 | 1.685734e-49 | -8.615850e-47 |
| Msa0669410 | Msa0800210 | 0.950105 | 3.266876e-108 | -8.615850e-47 |
| Msa0669410 | Msa0802830 | 0.821944 | 3.083184e-53 | -8.615850e-47 |
| Msa0669410 | Msa0810220 | 0.818289 | 2.118997e-52 | -8.615850e-47 |
| Msa0669410 | Msa0818060 | 0.804420 | 2.178899e-49 | -8.615850e-47 |
| Msa0669410 | Msa0820770 | 0.804792 | 1.822376e-49 | -8.615850e-47 |
| Msa0669410 | Msa0820850 | 0.800253 | 1.571605e-48 | -8.615850e-47 |
| Msa0669410 | Msa0824390 | 0.822729 | 2.027169e-53 | -8.615850e-47 |
| Msa0669410 | Msa0824590 | 0.801983 | 6.959313e-49 | -8.615850e-47 |
| Msa0669410 | Msa0832340 | 0.834938 | 2.244226e-56 | -8.615850e-47 |
| Msa0669410 | Msa0835230 | 0.810810 | 9.577190e-51 | -8.615850e-47 |
| Msa0669410 | Msa0842710 | 0.964878 | 6.955697e-124 | -8.615850e-47 |
| Msa0669410 | Msa0844490 | 0.816360 | 5.757304e-52 | -8.615850e-47 |
| Msa0669410 | Msa0849030 | 0.819027 | 1.440745e-52 | -8.615850e-47 |
| Msa0669410 | Msa0861090 | 0.802050 | 6.741453e-49 | -8.615850e-47 |
| Msa0669410 | Msa0890310 | 0.800891 | 1.164933e-48 | -8.615850e-47 |
| Msa0669410 | Msa0898750 | 0.807135 | 5.859256e-50 | -8.615850e-47 |
| Msa0669410 | Msa0907040 | 0.804692 | 1.912331e-49 | -8.615850e-47 |
| Msa0669410 | Msa0913060 | 0.821323 | 4.293069e-53 | -8.615850e-47 |
| Msa0669410 | Msa0916690 | 0.811373 | 7.233927e-51 | -8.615850e-47 |
| Msa0669410 | Msa0924310 | 0.819010 | 1.453845e-52 | -8.615850e-47 |
| Msa0669410 | Msa0925250 | 0.813850 | 2.077376e-51 | -8.615850e-47 |
| Msa0669410 | Msa0925290 | 0.834864 | 2.342030e-56 | -8.615850e-47 |
| Msa0669410 | Msa0925870 | 0.822072 | 2.880388e-53 | -8.615850e-47 |
| Msa0669410 | Msa0927380 | 0.803704 | 3.070148e-49 | -8.615850e-47 |
| Msa0669410 | Msa0927390 | 0.804419 | 2.179941e-49 | -8.615850e-47 |
| Msa0669410 | Msa0928130 | 0.802713 | 4.923481e-49 | -8.615850e-47 |
| Msa0669410 | Msa0932300 | 0.826255 | 2.998451e-54 | -8.615850e-47 |
| Msa0669410 | Msa0932830 | 0.827653 | 1.388858e-54 | -8.615850e-47 |
| Msa0669410 | Msa0933100 | 0.802803 | 4.718139e-49 | -8.615850e-47 |
| Msa0669410 | Msa0936390 | 0.800229 | 1.589807e-48 | -8.615850e-47 |
| Msa0669410 | Msa0953120 | 0.804622 | 1.977375e-49 | -8.615850e-47 |
| Msa0669410 | Msa0964310 | 0.811170 | 8.002501e-51 | -8.615850e-47 |
| Msa0669410 | Msa0967280 | 0.805092 | 1.577480e-49 | -8.615850e-47 |
| Msa0669410 | Msa0969520 | 0.813235 | 2.835950e-51 | -8.615850e-47 |
| Msa0669410 | Msa1002000 | 0.823092 | 1.668696e-53 | -8.615850e-47 |
| Msa0669410 | Msa1002360 | 0.987487 | 1.954986e-170 | -8.615850e-47 |
| Msa0669410 | Msa1038810 | 0.800631 | 1.316622e-48 | -8.615850e-47 |
| Msa0669410 | Msa1075650 | 0.819922 | 9.003328e-53 | -8.615850e-47 |
| Msa0669410 | Msa1081330 | 0.813621 | 2.332695e-51 | -8.615850e-47 |
| Msa0669410 | Msa1117240 | 0.820196 | 7.794907e-53 | -8.615850e-47 |
| Msa0669410 | Msa1121490 | 0.811060 | 8.456220e-51 | -8.615850e-47 |
| Msa0669410 | Msa1122150 | 0.820033 | 8.494129e-53 | -8.615850e-47 |
| Msa0669410 | Msa1137570 | 0.817884 | 2.615409e-52 | -8.615850e-47 |
| Msa0669410 | Msa1151180 | 0.805375 | 1.376354e-49 | -8.615850e-47 |
| Msa0669410 | Msa1174040 | 0.804787 | 1.827094e-49 | -8.615850e-47 |
| Msa0669410 | Msa1190920 | 0.803530 | 3.335572e-49 | -8.615850e-47 |
| Msa0669410 | Msa1193290 | 0.810209 | 1.291429e-50 | -8.615850e-47 |
| Msa0669410 | Msa1210220 | 0.802218 | 6.228176e-49 | -8.615850e-47 |
| Msa0669410 | Msa1234970 | 0.830750 | 2.462944e-55 | -8.615850e-47 |
| Msa0669410 | Msa1248370 | 0.819204 | 1.312981e-52 | -8.615850e-47 |
| Msa0669410 | Msa1249460 | 0.817386 | 3.388066e-52 | -8.615850e-47 |
| Msa0669410 | Msa1250530 | 0.808767 | 2.634170e-50 | -8.615850e-47 |
| Msa0669410 | Msa1253020 | 0.800794 | 1.219228e-48 | -8.615850e-47 |
| Msa0669410 | Msa1259390 | 0.804977 | 1.666828e-49 | -8.615850e-47 |
| Msa0669410 | Msa1269920 | 0.802744 | 4.851268e-49 | -8.615850e-47 |
| Msa0669410 | Msa1269940 | 0.837964 | 3.808284e-57 | -8.615850e-47 |
| Msa0669410 | Msa1279400 | 0.800230 | 1.589127e-48 | -8.615850e-47 |
| Msa0669410 | Msa1285550 | 0.806445 | 8.198751e-50 | -8.615850e-47 |
| Msa0669410 | Msa1297290 | 0.802392 | 5.734618e-49 | -8.615850e-47 |
| Msa0669410 | Msa1305810 | 0.809718 | 1.647718e-50 | -8.615850e-47 |
| Msa0669410 | Msa1310700 | 0.846394 | 2.233384e-59 | -8.615850e-47 |
| Msa0669410 | Msa1313140 | 0.802186 | 6.322564e-49 | -8.615850e-47 |
| Msa0669410 | Msa1325860 | -0.802893 | 4.520525e-49 | -8.615850e-47 |
| Msa0669410 | Msa1353470 | 0.828179 | 1.038206e-54 | -8.615850e-47 |
| Msa0669410 | Msa1353980 | 0.808262 | 3.376689e-50 | -8.615850e-47 |
| Msa0669410 | Msa1367850 | 0.802939 | 4.421124e-49 | -8.615850e-47 |
| Msa0669410 | Msa1372240 | 0.826192 | 3.104025e-54 | -8.615850e-47 |
| Msa0669410 | Msa1372760 | 0.803453 | 3.460532e-49 | -8.615850e-47 |
| Msa0669410 | Msa1397120 | 0.801912 | 7.197541e-49 | -8.615850e-47 |
| Msa0669410 | Msa1403480 | 0.813642 | 2.308190e-51 | -8.615850e-47 |
| Msa0669410 | Msa1404300 | 0.808486 | 3.024638e-50 | -8.615850e-47 |
| Msa0669410 | Msa1411020 | 0.848036 | 7.914140e-60 | -8.615850e-47 |
| Msa0669410 | Msa1420490 | 0.843424 | 1.413258e-58 | -8.615850e-47 |
| Msa0669410 | Msa1420820 | 0.822600 | 2.171911e-53 | -8.615850e-47 |
| Msa0669410 | Msa1421990 | 0.811418 | 7.069723e-51 | -8.615850e-47 |
| Msa0669410 | Msa1423390 | 0.843303 | 1.522005e-58 | -8.615850e-47 |
| Msa0669410 | Msa1424290 | 0.848682 | 5.244825e-60 | -8.615850e-47 |
| Msa0669410 | Msa1427230 | 0.824258 | 8.899856e-54 | -8.615850e-47 |
| Msa0669410 | Msa1434350 | 0.845107 | 4.990596e-59 | -8.615850e-47 |
| Msa0669410 | Msa1435270 | 0.820292 | 7.409919e-53 | -8.615850e-47 |
| Msa0669410 | Msa1439320 | 0.848618 | 5.464913e-60 | -8.615850e-47 |
| Msa0669410 | Msa1440370 | 0.845102 | 5.006308e-59 | -8.615850e-47 |
| Msa0669410 | Msa1440810 | 0.843690 | 1.199947e-58 | -8.615850e-47 |
| Msa0669410 | Msa1443060 | 0.805049 | 1.610076e-49 | -8.615850e-47 |
| Msa0669410 | Msa1448640 | 0.817594 | 3.041641e-52 | -8.615850e-47 |
| Msa0669410 | Msa1458770 | 0.810743 | 9.901944e-51 | -8.615850e-47 |
| Msa0669410 | Msa1460830 | 0.811433 | 7.016890e-51 | -8.615850e-47 |
| Msa0669410 | Msa1466540 | 0.809969 | 1.454704e-50 | -8.615850e-47 |
| Msa0124250 | Msa0669410 | 0.802454 | 5.567017e-49 | -8.615850e-47 |
| Msa0124320 | Msa0669410 | 0.806351 | 8.581096e-50 | -8.615850e-47 |
| Msa0127800 | Msa0669410 | 0.801015 | 1.099208e-48 | -8.615850e-47 |
| Msa0130970 | Msa0669410 | 0.803926 | 2.761221e-49 | -8.615850e-47 |
| Msa0131770 | Msa0669410 | 0.836538 | 8.824665e-57 | -8.615850e-47 |
| Msa0138500 | Msa0669410 | 0.800482 | 1.411650e-48 | -8.615850e-47 |
| Msa0178570 | Msa0669410 | 0.830689 | 2.550077e-55 | -8.615850e-47 |
| Msa0182740 | Msa0669410 | 0.804169 | 2.457425e-49 | -8.615850e-47 |
| Msa0194440 | Msa0669410 | 0.800131 | 1.663903e-48 | -8.615850e-47 |
| Msa0206010 | Msa0669410 | 0.808239 | 3.414575e-50 | -8.615850e-47 |
| Msa0211150 | Msa0669410 | 0.805853 | 1.092137e-49 | -8.615850e-47 |
| Msa0219590 | Msa0669410 | 0.817262 | 3.612242e-52 | -8.615850e-47 |
| Msa0223010 | Msa0669410 | 0.812097 | 5.031076e-51 | -8.615850e-47 |
| Msa0236510 | Msa0669410 | -0.808604 | 2.854037e-50 | -8.615850e-47 |
| Msa0373450 | Msa0669410 | 0.808929 | 2.432567e-50 | -8.615850e-47 |
| Msa0390400 | Msa0669410 | -0.811224 | 7.791479e-51 | -8.615850e-47 |
| Msa0411390 | Msa0669410 | 0.843139 | 1.683165e-58 | -8.615850e-47 |
| Msa0417330 | Msa0669410 | 0.806912 | 6.531509e-50 | -8.615850e-47 |
| Msa0425790 | Msa0669410 | 0.802597 | 5.203178e-49 | -8.615850e-47 |
| Msa0426930 | Msa0669410 | 0.820879 | 5.431713e-53 | -8.615850e-47 |
| Msa0434000 | Msa0669410 | 0.831838 | 1.330281e-55 | -8.615850e-47 |
| Msa0453350 | Msa0669410 | 0.823646 | 1.238387e-53 | -8.615850e-47 |
| Msa0454360 | Msa0669410 | 0.803119 | 4.058065e-49 | -8.615850e-47 |
| Msa0454490 | Msa0669410 | 0.822317 | 2.526873e-53 | -8.615850e-47 |
| Msa0455760 | Msa0669410 | 0.834057 | 3.734907e-56 | -8.615850e-47 |
| Msa0459260 | Msa0669410 | 0.860429 | 2.079219e-63 | -8.615850e-47 |
| Msa0471550 | Msa0669410 | 0.845376 | 4.220751e-59 | -8.615850e-47 |
| Msa0471580 | Msa0669410 | 0.838189 | 3.334606e-57 | -8.615850e-47 |
| Msa0475600 | Msa0669410 | 0.803940 | 2.742922e-49 | -8.615850e-47 |
| Msa0479340 | Msa0669410 | 0.808720 | 2.695605e-50 | -8.615850e-47 |
| Msa0240420 | Msa0669410 | 0.807032 | 6.163210e-50 | -8.615850e-47 |
| Msa0251270 | Msa0669410 | 0.804699 | 1.905861e-49 | -8.615850e-47 |
| Msa0251320 | Msa0669410 | 0.801154 | 1.029247e-48 | -8.615850e-47 |
| Msa0260780 | Msa0669410 | 0.803193 | 3.918874e-49 | -8.615850e-47 |
| Msa0266830 | Msa0669410 | 0.802857 | 4.597213e-49 | -8.615850e-47 |
| Msa0275020 | Msa0669410 | 0.805627 | 1.218554e-49 | -8.615850e-47 |
| Msa0286670 | Msa0669410 | 0.812328 | 4.480948e-51 | -8.615850e-47 |
| Msa0287410 | Msa0669410 | 0.803604 | 3.220021e-49 | -8.615850e-47 |
| Msa0290870 | Msa0669410 | 0.811768 | 5.935782e-51 | -8.615850e-47 |
| Msa0292930 | Msa0669410 | 0.805091 | 1.577688e-49 | -8.615850e-47 |
| Msa0315200 | Msa0669410 | 0.819983 | 8.717822e-53 | -8.615850e-47 |
| Msa0315940 | Msa0669410 | 0.800806 | 1.212626e-48 | -8.615850e-47 |
| Msa0319170 | Msa0669410 | 0.824217 | 9.098943e-54 | -8.615850e-47 |
| Msa0326110 | Msa0669410 | 0.815501 | 8.951946e-52 | -8.615850e-47 |
| Msa0331000 | Msa0669410 | 0.841717 | 4.010428e-58 | -8.615850e-47 |
| Msa0339620 | Msa0669410 | 0.815452 | 9.180393e-52 | -8.615850e-47 |
| Msa0343850 | Msa0669410 | 0.815770 | 7.799190e-52 | -8.615850e-47 |
| Msa0348530 | Msa0669410 | 0.804140 | 2.492401e-49 | -8.615850e-47 |
| Msa0363790 | Msa0669410 | 0.813911 | 2.014433e-51 | -8.615850e-47 |
| Msa0501450 | Msa0669410 | 0.806744 | 7.090113e-50 | -8.615850e-47 |
| Msa0516170 | Msa0669410 | 0.811608 | 6.430346e-51 | -8.615850e-47 |
| Msa0521270 | Msa0669410 | 0.850302 | 1.854478e-60 | -8.615850e-47 |
| Msa0529040 | Msa0669410 | 0.808978 | 2.374532e-50 | -8.615850e-47 |
| Msa0535630 | Msa0669410 | 0.835198 | 1.929766e-56 | -8.615850e-47 |
| Msa0547750 | Msa0669410 | 0.804292 | 2.316836e-49 | -8.615850e-47 |
| Msa0565450 | Msa0669410 | 0.815095 | 1.102119e-51 | -8.615850e-47 |
| Msa0578920 | Msa0669410 | 0.833669 | 4.671206e-56 | -8.615850e-47 |
| Msa0595230 | Msa0669410 | 0.820122 | 8.104651e-53 | -8.615850e-47 |
| Msa0598880 | Msa0669410 | -0.846282 | 2.395699e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669410 | MtrunA17_Chr1g0203051 | 46.179 | 602 | 311 | 1 | 73 | 674 | 33 | 621 | 0.0 | 577 |
| Msa0669410 | MtrunA17_Chr2g0287651 | 35.014 | 694 | 434 | 7 | 70 | 750 | 2 | 691 | 2.31e-141 | 439 |
| Msa0669410 | MtrunA17_Chr2g0308841 | 59.292 | 226 | 92 | 0 | 461 | 686 | 1 | 226 | 1.11e-98 | 308 |
| Msa0669410 | MtrunA17_Chr1g0202341 | 30.201 | 596 | 395 | 7 | 109 | 688 | 20 | 610 | 1.10e-93 | 308 |
| Msa0669410 | MtrunA17_Chr5g0448761 | 28.243 | 609 | 416 | 10 | 138 | 727 | 66 | 672 | 1.54e-89 | 300 |
| Msa0669410 | MtrunA17_Chr1g0198761 | 27.755 | 717 | 465 | 18 | 137 | 821 | 52 | 747 | 8.46e-79 | 270 |
| Msa0669410 | MtrunA17_Chr2g0324011 | 28.136 | 558 | 388 | 5 | 138 | 687 | 16 | 568 | 6.46e-78 | 263 |
| Msa0669410 | MtrunA17_Chr8g0363841 | 27.698 | 556 | 389 | 6 | 144 | 690 | 29 | 580 | 1.67e-77 | 265 |
| Msa0669410 | MtrunA17_Chr5g0441581 | 29.433 | 564 | 370 | 12 | 136 | 687 | 36 | 583 | 1.01e-76 | 263 |
| Msa0669410 | MtrunA17_Chr2g0296781 | 27.861 | 664 | 441 | 14 | 138 | 780 | 3 | 649 | 1.66e-71 | 249 |
| Msa0669410 | MtrunA17_Chr1g0203721 | 27.915 | 566 | 383 | 10 | 137 | 687 | 68 | 623 | 3.81e-70 | 248 |
| Msa0669410 | MtrunA17_Chr3g0082121 | 26.964 | 560 | 381 | 9 | 138 | 687 | 49 | 590 | 4.74e-68 | 239 |
| Msa0669410 | MtrunA17_Chr6g0458391 | 26.250 | 560 | 378 | 9 | 138 | 687 | 231 | 765 | 4.72e-67 | 238 |
| Msa0669410 | MtrunA17_Chr2g0287061 | 28.571 | 560 | 349 | 12 | 138 | 690 | 189 | 704 | 1.05e-66 | 237 |
| Msa0669410 | MtrunA17_Chr1g0207551 | 28.049 | 574 | 379 | 13 | 131 | 687 | 33 | 589 | 4.96e-64 | 230 |
| Msa0669410 | MtrunA17_Chr5g0448511 | 29.897 | 388 | 256 | 4 | 313 | 690 | 19 | 400 | 3.40e-63 | 222 |
| Msa0669410 | MtrunA17_Chr6g0477261 | 27.695 | 538 | 358 | 10 | 264 | 780 | 11 | 538 | 3.41e-63 | 224 |
| Msa0669410 | MtrunA17_Chr5g0431001 | 30.455 | 440 | 279 | 8 | 137 | 555 | 66 | 499 | 9.15e-63 | 219 |
| Msa0669410 | MtrunA17_Chr2g0276841 | 25.190 | 659 | 432 | 15 | 137 | 768 | 75 | 699 | 7.49e-60 | 216 |
| Msa0669410 | MtrunA17_Chr3g0080351 | 25.723 | 657 | 436 | 17 | 131 | 764 | 75 | 702 | 8.65e-60 | 218 |
| Msa0669410 | MtrunA17_Chr3g0118611 | 28.333 | 420 | 291 | 5 | 299 | 712 | 111 | 526 | 1.01e-59 | 217 |
| Msa0669410 | MtrunA17_Chr5g0440451 | 24.086 | 602 | 413 | 9 | 136 | 712 | 47 | 629 | 1.37e-59 | 219 |
| Msa0669410 | MtrunA17_Chr2g0294841 | 25.103 | 729 | 465 | 19 | 138 | 813 | 51 | 751 | 3.80e-59 | 215 |
| Msa0669410 | MtrunA17_Chr2g0329031 | 24.869 | 571 | 403 | 11 | 125 | 686 | 7 | 560 | 7.14e-58 | 211 |
| Msa0669410 | MtrunA17_Chr2g0291581 | 24.375 | 640 | 416 | 15 | 138 | 745 | 77 | 680 | 6.19e-56 | 204 |
| Msa0669410 | MtrunA17_Chr2g0290391 | 25.000 | 688 | 427 | 20 | 136 | 781 | 55 | 695 | 3.25e-55 | 202 |
| Msa0669410 | MtrunA17_Chr1g0196541 | 25.487 | 565 | 399 | 9 | 136 | 687 | 1 | 556 | 1.05e-52 | 196 |
| Msa0669410 | MtrunA17_Chr2g0291591 | 25.197 | 508 | 361 | 10 | 131 | 629 | 63 | 560 | 1.62e-48 | 181 |
| Msa0669410 | MtrunA17_Chr1g0164591 | 27.244 | 312 | 215 | 3 | 213 | 519 | 3 | 307 | 4.46e-43 | 159 |
| Msa0669410 | MtrunA17_Chr1g0171741 | 39.163 | 263 | 136 | 9 | 6 | 261 | 16 | 261 | 6.08e-40 | 148 |
| Msa0669410 | MtrunA17_Chr8g0389811 | 37.209 | 172 | 104 | 1 | 72 | 243 | 28 | 195 | 1.40e-31 | 122 |
| Msa0669410 | MtrunA17_Chr7g0258861 | 26.298 | 289 | 207 | 4 | 136 | 420 | 14 | 300 | 1.22e-25 | 108 |
| Msa0669410 | MtrunA17_Chr2g0331371 | 41.667 | 132 | 77 | 0 | 112 | 243 | 35 | 166 | 2.15e-24 | 102 |
| Msa0669410 | MtrunA17_Chr8g0340801 | 39.252 | 107 | 65 | 0 | 243 | 349 | 1 | 107 | 9.50e-23 | 94.0 |
| Msa0669410 | MtrunA17_Chr6g0473421 | 35.115 | 131 | 80 | 2 | 83 | 208 | 1 | 131 | 1.86e-22 | 94.7 |
| Msa0669410 | MtrunA17_Chr1g0172931 | 37.864 | 103 | 64 | 0 | 112 | 214 | 56 | 158 | 9.52e-17 | 78.6 |
| Msa0669410 | MtrunA17_Chr1g0149131 | 29.091 | 110 | 73 | 1 | 411 | 515 | 1 | 110 | 1.06e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669410 | AT4G38180.1 | 30.068 | 592 | 397 | 9 | 128 | 706 | 69 | 656 | 2.25e-89 | 300 |
| Msa0669410 | AT3G06250.2 | 28.323 | 632 | 383 | 13 | 130 | 753 | 188 | 757 | 2.67e-73 | 255 |
| Msa0669410 | AT3G06250.1 | 28.323 | 632 | 383 | 13 | 130 | 753 | 188 | 757 | 2.67e-73 | 255 |
| Msa0669410 | AT3G06250.3 | 28.323 | 632 | 383 | 13 | 130 | 753 | 188 | 757 | 2.67e-73 | 255 |
| Msa0669410 | AT5G18960.2 | 28.106 | 644 | 372 | 16 | 130 | 753 | 209 | 781 | 2.23e-70 | 248 |
| Msa0669410 | AT5G18960.1 | 28.106 | 644 | 372 | 16 | 130 | 753 | 209 | 781 | 2.23e-70 | 248 |
| Msa0669410 | AT4G15090.1 | 25.770 | 617 | 432 | 11 | 138 | 741 | 57 | 660 | 1.78e-65 | 234 |
| Msa0669410 | AT4G15090.5 | 25.770 | 617 | 432 | 11 | 138 | 741 | 57 | 660 | 1.78e-65 | 234 |
| Msa0669410 | AT4G15090.3 | 25.770 | 617 | 432 | 11 | 138 | 741 | 57 | 660 | 1.78e-65 | 234 |
| Msa0669410 | AT4G15090.2 | 25.770 | 617 | 432 | 11 | 138 | 741 | 57 | 660 | 1.78e-65 | 234 |
| Msa0669410 | AT4G15090.4 | 25.770 | 617 | 432 | 11 | 138 | 741 | 57 | 660 | 1.78e-65 | 234 |
| Msa0669410 | AT3G22170.2 | 25.079 | 630 | 407 | 14 | 96 | 687 | 16 | 618 | 8.08e-61 | 221 |
| Msa0669410 | AT3G22170.1 | 25.079 | 630 | 407 | 14 | 96 | 687 | 16 | 618 | 8.08e-61 | 221 |
| Msa0669410 | AT1G76320.3 | 27.143 | 560 | 380 | 12 | 138 | 687 | 3 | 544 | 4.63e-59 | 214 |
| Msa0669410 | AT1G76320.2 | 27.143 | 560 | 380 | 12 | 138 | 687 | 3 | 544 | 1.20e-58 | 214 |
| Msa0669410 | AT1G76320.1 | 27.143 | 560 | 380 | 12 | 138 | 687 | 3 | 544 | 1.21e-58 | 214 |
| Msa0669410 | AT1G76320.4 | 27.143 | 560 | 380 | 12 | 138 | 687 | 3 | 544 | 1.21e-58 | 214 |
| Msa0669410 | AT1G10240.2 | 26.520 | 592 | 378 | 16 | 137 | 696 | 53 | 619 | 1.77e-58 | 212 |
| Msa0669410 | AT1G10240.1 | 26.520 | 592 | 378 | 16 | 137 | 696 | 53 | 619 | 1.77e-58 | 212 |
| Msa0669410 | AT2G27110.2 | 24.785 | 581 | 392 | 11 | 138 | 705 | 55 | 603 | 7.26e-57 | 210 |
| Msa0669410 | AT2G27110.1 | 24.785 | 581 | 392 | 11 | 138 | 705 | 55 | 603 | 7.26e-57 | 210 |
| Msa0669410 | AT1G52520.1 | 26.773 | 564 | 377 | 16 | 138 | 684 | 91 | 635 | 9.61e-57 | 207 |
| Msa0669410 | AT2G27110.3 | 26.619 | 417 | 292 | 5 | 300 | 705 | 45 | 458 | 1.42e-53 | 199 |
| Msa0669410 | AT2G32250.2 | 26.354 | 554 | 354 | 12 | 138 | 684 | 44 | 550 | 4.80e-52 | 196 |
| Msa0669410 | AT2G32250.4 | 26.354 | 554 | 354 | 12 | 138 | 684 | 44 | 550 | 4.80e-52 | 196 |
| Msa0669410 | AT2G32250.8 | 26.354 | 554 | 354 | 12 | 138 | 684 | 3 | 509 | 5.22e-52 | 195 |
| Msa0669410 | AT2G32250.6 | 26.354 | 554 | 354 | 12 | 138 | 684 | 44 | 550 | 5.68e-52 | 195 |
| Msa0669410 | AT2G32250.1 | 26.354 | 554 | 354 | 12 | 138 | 684 | 44 | 550 | 5.68e-52 | 195 |
| Msa0669410 | AT2G32250.3 | 26.354 | 554 | 354 | 12 | 138 | 684 | 44 | 550 | 5.68e-52 | 195 |
| Msa0669410 | AT2G32250.7 | 26.354 | 554 | 354 | 12 | 138 | 684 | 3 | 509 | 6.68e-52 | 194 |
| Msa0669410 | AT2G32250.5 | 26.354 | 554 | 354 | 12 | 138 | 684 | 44 | 550 | 6.78e-52 | 194 |
| Msa0669410 | AT1G80010.1 | 25.463 | 648 | 417 | 18 | 138 | 742 | 101 | 725 | 2.41e-51 | 192 |
| Msa0669410 | AT5G28530.3 | 24.277 | 622 | 416 | 16 | 106 | 695 | 27 | 625 | 7.01e-50 | 187 |
| Msa0669410 | AT5G28530.2 | 24.277 | 622 | 416 | 16 | 106 | 695 | 27 | 625 | 7.01e-50 | 187 |
| Msa0669410 | AT5G28530.1 | 24.394 | 619 | 423 | 15 | 106 | 695 | 27 | 629 | 1.12e-49 | 187 |
| Msa0669410 | AT4G38170.1 | 27.340 | 406 | 268 | 8 | 301 | 693 | 12 | 403 | 5.49e-49 | 182 |
| Msa0669410 | AT4G19990.3 | 23.480 | 592 | 387 | 14 | 121 | 687 | 9 | 559 | 3.90e-45 | 174 |
| Msa0669410 | AT4G19990.4 | 23.480 | 592 | 387 | 14 | 121 | 687 | 9 | 559 | 3.90e-45 | 174 |
| Msa0669410 | AT4G19990.5 | 23.480 | 592 | 387 | 14 | 121 | 687 | 9 | 559 | 4.70e-45 | 174 |
| Msa0669410 | AT4G19990.6 | 23.480 | 592 | 387 | 14 | 121 | 687 | 9 | 559 | 5.35e-45 | 174 |
| Msa0669410 | AT4G19990.2 | 23.480 | 592 | 387 | 14 | 121 | 687 | 9 | 559 | 5.35e-45 | 174 |
| Msa0669410 | AT4G19990.7 | 23.480 | 592 | 387 | 14 | 121 | 687 | 23 | 573 | 6.00e-45 | 174 |
| Msa0669410 | AT4G19990.1 | 23.105 | 541 | 352 | 12 | 170 | 687 | 3 | 502 | 4.88e-42 | 164 |
| Msa0669410 | AT5G28530.5 | 22.241 | 607 | 384 | 16 | 106 | 695 | 27 | 562 | 1.59e-34 | 140 |
| Msa0669410 | AT5G28530.4 | 22.824 | 609 | 382 | 18 | 106 | 695 | 27 | 566 | 3.52e-34 | 139 |
Find 156 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATATGCACACGAAATT+TGG | 0.121650 | 4_4:+11091814 | None:intergenic |
| AAAATCAGTCATATTCATTT+TGG | 0.157178 | 4_4:+11090827 | None:intergenic |
| GAGTATCAAGTATCGATATT+AGG | 0.200358 | 4_4:+11090625 | None:intergenic |
| TTTGGAAATTTGAAAATCTT+TGG | 0.203663 | 4_4:-11091019 | Msa0669410:CDS |
| GTAGGCTGCAACACTTATTT+TGG | 0.215688 | 4_4:-11091439 | Msa0669410:CDS |
| GATGGGGAAGGGGATGATTT+TGG | 0.225774 | 4_4:-11092409 | Msa0669410:CDS |
| CAGAAGAATTTCGAAGTCTT+TGG | 0.246838 | 4_4:-11091401 | Msa0669410:CDS |
| GAAAGTGATGAAGCTTTCTT+AGG | 0.257531 | 4_4:-11092259 | Msa0669410:CDS |
| ACAATGATGGTTCACACTAT+TGG | 0.260684 | 4_4:-11090359 | Msa0669410:CDS |
| TACCATCTCGAATATTTCTT+TGG | 0.266947 | 4_4:+11090671 | None:intergenic |
| GGTTTCTGATTTATCATATA+AGG | 0.278651 | 4_4:-11090286 | Msa0669410:CDS |
| CAATGATGGTTCACACTATT+GGG | 0.279726 | 4_4:-11090358 | Msa0669410:CDS |
| TGTCTTAGAATGGAATCTAT+TGG | 0.287457 | 4_4:-11090498 | Msa0669410:CDS |
| GATGTTTCGAAGCTGCTATT+TGG | 0.293362 | 4_4:-11092046 | Msa0669410:CDS |
| GGTTGCTAGACATGCGAATT+TGG | 0.295257 | 4_4:-11090325 | Msa0669410:CDS |
| TGAAAATCTTTGGAATGATA+TGG | 0.301739 | 4_4:-11091009 | Msa0669410:CDS |
| CCACACCCGGTTTCATGTTT+CGG | 0.305468 | 4_4:+11091845 | None:intergenic |
| ATTCGGGGAAATTTCTTTGC+AGG | 0.313098 | 4_4:-11090909 | Msa0669410:CDS |
| TAAGGTAGGATTTCTGAAAA+AGG | 0.322031 | 4_4:-11091591 | Msa0669410:CDS |
| AGTATCAAGTATCGATATTA+GGG | 0.322456 | 4_4:+11090626 | None:intergenic |
| ACATGCAGATGATGAGGATT+TGG | 0.329267 | 4_4:-11092188 | Msa0669410:CDS |
| ACACTATTGGGATTCTCATT+TGG | 0.329690 | 4_4:-11090346 | Msa0669410:CDS |
| CATTTGCGTAACTTTGATTC+CGG | 0.344195 | 4_4:+11091649 | None:intergenic |
| TGTGGGCAGCAAGTCATATT+CGG | 0.348450 | 4_4:-11090926 | Msa0669410:CDS |
| ATGTTTCGAAGCTGCTATTT+GGG | 0.349738 | 4_4:-11092045 | Msa0669410:CDS |
| GAAGATGATTATTCCGTTGA+TGG | 0.369473 | 4_4:-11092223 | Msa0669410:CDS |
| GGTACGGATAGTCATGAAAA+AGG | 0.369480 | 4_4:-11090652 | Msa0669410:CDS |
| ACTTGAGCATGTAAATTATC+AGG | 0.372962 | 4_4:+11090180 | None:intergenic |
| GTGGGCAGCAAGTCATATTC+GGG | 0.378045 | 4_4:-11090925 | Msa0669410:CDS |
| ACAACCTTTGCTTCTTGAAC+AGG | 0.383386 | 4_4:+11090131 | None:intergenic |
| AAGATTCAAGTTACCAACTT+TGG | 0.389423 | 4_4:-11091677 | Msa0669410:CDS |
| ACATTTGTGTGCAATCTAGA+AGG | 0.405952 | 4_4:-11091914 | Msa0669410:CDS |
| TGAGAAACATTGTGCATTGC+TGG | 0.406720 | 4_4:-11091729 | Msa0669410:CDS |
| TGCTTGGTGATCATGAAGTT+TGG | 0.411781 | 4_4:-11091037 | Msa0669410:CDS |
| TGCATGTTCTTGTCTTAGAA+TGG | 0.413399 | 4_4:-11090508 | Msa0669410:CDS |
| GTAACACCGCAGTCCCATAT+TGG | 0.421953 | 4_4:+11090739 | None:intergenic |
| TTTGCAAAGGAGTCGATTAG+AGG | 0.423610 | 4_4:-11090387 | Msa0669410:CDS |
| TGAGGCATTTCATAGTCATA+TGG | 0.429073 | 4_4:-11090865 | Msa0669410:CDS |
| TAACACCGCAGTCCCATATT+GGG | 0.429323 | 4_4:+11090740 | None:intergenic |
| TATTTCCCAAGAGTTATCAT+AGG | 0.431230 | 4_4:-11091139 | Msa0669410:CDS |
| CCATCTGTTATTACAGAAAC+GGG | 0.434101 | 4_4:+11091194 | None:intergenic |
| GTGCATTGCTGGCTGCTCAT+AGG | 0.436395 | 4_4:-11091718 | Msa0669410:CDS |
| AATGATATGGTTGAAAAGTT+CGG | 0.444952 | 4_4:-11090996 | Msa0669410:CDS |
| ATCAAAGTTACGCAAATGAT+TGG | 0.447493 | 4_4:-11091644 | Msa0669410:CDS |
| ATCAAGCAGAAGGTTATGTT+TGG | 0.449795 | 4_4:-11090563 | Msa0669410:CDS |
| ACATAACCTATGATAACTCT+TGG | 0.457964 | 4_4:+11091133 | None:intergenic |
| ACCATCTGTTATTACAGAAA+CGG | 0.461386 | 4_4:+11091193 | None:intergenic |
| TACTGCCGTTGTTGCTAATG+AGG | 0.464827 | 4_4:-11091276 | Msa0669410:CDS |
| TGATGAATTTCCTAAGTCTC+TGG | 0.465021 | 4_4:-11090430 | Msa0669410:CDS |
| GTTACCAACTTTGGCAATGC+CGG | 0.467106 | 4_4:-11091668 | Msa0669410:CDS |
| GTACGAACAAATTCTCCATC+TGG | 0.467675 | 4_4:+11090006 | None:intergenic |
| GAATTTGGTGTATCTTAGTA+AGG | 0.468793 | 4_4:-11090310 | Msa0669410:CDS |
| TCGGTCTTGAAGACAATAGA+TGG | 0.471890 | 4_4:-11090977 | Msa0669410:CDS |
| TTTACATGCTCAAGTGGAGT+TGG | 0.473244 | 4_4:-11090172 | Msa0669410:CDS |
| ATTAGAGGTAATTACAATGA+TGG | 0.474312 | 4_4:-11090372 | Msa0669410:CDS |
| CGTGGTCCGAAACATGAAAC+CGG | 0.476193 | 4_4:-11091851 | Msa0669410:CDS |
| CGATTCAATACCAGAGACTT+AGG | 0.479278 | 4_4:+11090420 | None:intergenic |
| AAAGCAAAGTATTGCGATGA+AGG | 0.487005 | 4_4:-11090207 | Msa0669410:CDS |
| GAATGAAGCTGATGGGGAAG+GGG | 0.489435 | 4_4:-11092419 | Msa0669410:CDS |
| GAGGCATTTCATAGTCATAT+GGG | 0.491343 | 4_4:-11090864 | Msa0669410:CDS |
| GACAGTGAAGCAGATGATAC+TGG | 0.499803 | 4_4:-11092361 | Msa0669410:CDS |
| GACAGTGAAGCAGATGATAC+TGG | 0.499803 | 4_4:-11092385 | Msa0669410:CDS |
| CATAACCTATGATAACTCTT+GGG | 0.500586 | 4_4:+11091134 | None:intergenic |
| TGCCGCTGGCGGGTATGATA+AGG | 0.500952 | 4_4:-11091609 | Msa0669410:CDS |
| CGTTTGCAAATGCCGCTGGC+GGG | 0.501798 | 4_4:-11091619 | Msa0669410:CDS |
| TGCTCATAGGAAGCTGACTA+AGG | 0.509602 | 4_4:-11091705 | Msa0669410:CDS |
| ATTGGGAATTAAAATCAGCT+TGG | 0.509845 | 4_4:+11090757 | None:intergenic |
| TATGTGCATGGCACCTCCTA+CGG | 0.510752 | 4_4:-11091115 | Msa0669410:CDS |
| GATTCCGGCATTGCCAAAGT+TGG | 0.511513 | 4_4:+11091664 | None:intergenic |
| GGTGCGTTTGCAAATGCCGC+TGG | 0.512886 | 4_4:-11091623 | Msa0669410:CDS |
| GAGAATGAAGCTGATGGGGA+AGG | 0.513879 | 4_4:-11092421 | Msa0669410:CDS |
| TGTTGACGATATTGTAAAGA+TGG | 0.525284 | 4_4:-11092092 | Msa0669410:CDS |
| AGAATGAAGCTGATGGGGAA+GGG | 0.531569 | 4_4:-11092420 | Msa0669410:CDS |
| TTTGGCTTCACAACCACACC+CGG | 0.533161 | 4_4:+11091832 | None:intergenic |
| AAGAAATATTCGAGATGGTA+CGG | 0.533749 | 4_4:-11090668 | Msa0669410:CDS |
| ATACGGTTGGTGCGGATGGT+AGG | 0.533889 | 4_4:-11091457 | Msa0669410:CDS |
| TAGATATTGCATTCCGTAGG+AGG | 0.534345 | 4_4:+11091102 | None:intergenic |
| TGAAATTTCCTCGCCATCAA+CGG | 0.534707 | 4_4:+11092210 | None:intergenic |
| AGACATGAGAATGAAGCTGA+TGG | 0.535376 | 4_4:-11092427 | Msa0669410:CDS |
| GGTGACAGTGAAGGAGATAG+TGG | 0.538500 | 4_4:-11092316 | Msa0669410:CDS |
| AATATCATTACTTAATCGCA+AGG | 0.538635 | 4_4:+11089963 | None:intergenic |
| GACATGAGAATGAAGCTGAT+GGG | 0.540980 | 4_4:-11092426 | Msa0669410:CDS |
| TGATTATTCCGTTGATGGCG+AGG | 0.543980 | 4_4:-11092218 | Msa0669410:CDS |
| TTGATATAATTACTCAACGT+TGG | 0.545692 | 4_4:-11091796 | Msa0669410:CDS |
| AGTCTCTGGTATTGAATCGT+TGG | 0.547489 | 4_4:-11090416 | Msa0669410:CDS |
| ACCTAGCACGAGCAATGCAA+TGG | 0.547777 | 4_4:-11090106 | Msa0669410:CDS |
| GATGATACTGGTGACGGTGA+AGG | 0.547882 | 4_4:-11092349 | Msa0669410:CDS |
| ACTGATGTTTGTTGAACATA+CGG | 0.549271 | 4_4:-11091474 | Msa0669410:CDS |
| CCTCTCAAGTGACCTCAGAC+TGG | 0.550020 | 4_4:+11090713 | None:intergenic |
| GATGATAGTGGTGACAGTGA+AGG | 0.552446 | 4_4:-11092325 | Msa0669410:CDS |
| CCCGTTTCTGTAATAACAGA+TGG | 0.553318 | 4_4:-11091194 | Msa0669410:CDS |
| TGTCCCACTCTTAATCCAGA+TGG | 0.555650 | 4_4:-11090021 | Msa0669410:CDS |
| TACCAAAGAAATATTCGAGA+TGG | 0.558333 | 4_4:-11090673 | Msa0669410:CDS |
| GACTATGAAATGCCTCACAC+CGG | 0.561637 | 4_4:+11090871 | None:intergenic |
| GCTGCTATTTGGGAGTCTTG+AGG | 0.562706 | 4_4:-11092035 | Msa0669410:CDS |
| CCTAGCACGAGCAATGCAAT+GGG | 0.563237 | 4_4:-11090105 | Msa0669410:CDS |
| GTTGTTGCTAATGAGGTTGA+AGG | 0.563601 | 4_4:-11091269 | Msa0669410:CDS |
| TGTTGGTTTGCAAAGATGAA+CGG | 0.567136 | 4_4:-11091995 | Msa0669410:CDS |
| CCTTCCTGTTCAAGAAGCAA+AGG | 0.571674 | 4_4:-11090135 | Msa0669410:CDS |
| CATGCAAAATCGTTGTTCGA+TGG | 0.571680 | 4_4:+11090525 | None:intergenic |
| GCAAAGTATTGCGATGAAGG+TGG | 0.572553 | 4_4:-11090204 | Msa0669410:CDS |
| TTCTCCATCTGGATTAAGAG+TGG | 0.574042 | 4_4:+11090017 | None:intergenic |
| TGTTCAAGAAGCAAAGGTTG+TGG | 0.574381 | 4_4:-11090129 | Msa0669410:CDS |
| CATATCATGATTGTGATCAA+AGG | 0.574576 | 4_4:+11091757 | None:intergenic |
| AATTTCACATGCAGATGATG+AGG | 0.582843 | 4_4:-11092194 | Msa0669410:CDS |
| CAAAGTATTGCGATGAAGGT+GGG | 0.584579 | 4_4:-11090203 | Msa0669410:CDS |
| GTGTCAAAATATCAAGCAGA+AGG | 0.586162 | 4_4:-11090573 | Msa0669410:CDS |
| GACGGTGAAGGAGATGATAG+TGG | 0.587223 | 4_4:-11092337 | Msa0669410:CDS |
| GCGTTTGCAAATGCCGCTGG+CGG | 0.592180 | 4_4:-11091620 | Msa0669410:CDS |
| CGGAATGCAATATCTAACAT+TGG | 0.594292 | 4_4:-11091095 | Msa0669410:CDS |
| TTTGGTGTATCTTAGTAAGG+AGG | 0.595309 | 4_4:-11090307 | Msa0669410:CDS |
| TCACAGACGTGTGGGATATG+TGG | 0.596443 | 4_4:-11090069 | Msa0669410:CDS |
| TGATAATTTACATGCTCAAG+TGG | 0.597139 | 4_4:-11090178 | Msa0669410:CDS |
| ACTATGAAATGCCTCACACC+GGG | 0.598023 | 4_4:+11090872 | None:intergenic |
| ACGTGTGGGATATGTGGTGC+AGG | 0.599744 | 4_4:-11090063 | Msa0669410:CDS |
| CCCATTGCATTGCTCGTGCT+AGG | 0.600150 | 4_4:+11090105 | None:intergenic |
| CAGATGGTGATATAGCTATG+AGG | 0.605316 | 4_4:-11091178 | Msa0669410:CDS |
| AAAATATTTAGAATATCTAA+CGG | 0.607430 | 4_4:-11090247 | Msa0669410:CDS |
| TCTCCATCTGGATTAAGAGT+GGG | 0.607877 | 4_4:+11090018 | None:intergenic |
| ACATGAGAATGAAGCTGATG+GGG | 0.608034 | 4_4:-11092425 | Msa0669410:CDS |
| GTTATCATAGGTTATGTGCA+TGG | 0.608973 | 4_4:-11091127 | Msa0669410:CDS |
| CCAGTCTGAGGTCACTTGAG+AGG | 0.609316 | 4_4:-11090713 | Msa0669410:CDS |
| GAACATACGGTTGGTGCGGA+TGG | 0.610060 | 4_4:-11091461 | Msa0669410:CDS |
| CAGGAATAAGAACAACATCC+CGG | 0.610393 | 4_4:-11090890 | Msa0669410:CDS |
| TTGTTGCTAATGAGGTTGAA+GGG | 0.614880 | 4_4:-11091268 | Msa0669410:CDS |
| TCGTTGGTCACAATTTGCAA+AGG | 0.617164 | 4_4:-11090400 | Msa0669410:CDS |
| TGAGCATATCATTGCTGTGA+TGG | 0.617484 | 4_4:-11090466 | Msa0669410:CDS |
| ATGTTTGTTGAACATACGGT+TGG | 0.617809 | 4_4:-11091470 | Msa0669410:CDS |
| CCTTTGCTTCTTGAACAGGA+AGG | 0.617922 | 4_4:+11090135 | None:intergenic |
| GAAAATATGCAACACACCTG+TGG | 0.618576 | 4_4:+11090793 | None:intergenic |
| CCGAAACATGAAACCGGGTG+TGG | 0.622159 | 4_4:-11091845 | Msa0669410:CDS |
| TTCAACCTCATTAGCAACAA+CGG | 0.622360 | 4_4:+11091271 | None:intergenic |
| AAGAACAACATCCCGGTGTG+AGG | 0.623949 | 4_4:-11090883 | Msa0669410:CDS |
| GCAGATGATGAGGATTTGGA+CGG | 0.633477 | 4_4:-11092184 | Msa0669410:CDS |
| GCAATGCAATGGGTCATCGT+CGG | 0.633980 | 4_4:-11090095 | Msa0669410:CDS |
| AGGGACATATGTGTGGCTGT+TGG | 0.634437 | 4_4:-11091249 | Msa0669410:CDS |
| CGTCGGCGATCACAGACGTG+TGG | 0.640458 | 4_4:-11090078 | Msa0669410:CDS |
| GTCGGCGATCACAGACGTGT+GGG | 0.640804 | 4_4:-11090077 | Msa0669410:CDS |
| GTATGTTCAACAAACATCAG+TGG | 0.647532 | 4_4:+11091476 | None:intergenic |
| TGTTAGATATTGCATTCCGT+AGG | 0.648853 | 4_4:+11091099 | None:intergenic |
| GTGGTCCGAAACATGAAACC+GGG | 0.650609 | 4_4:-11091850 | Msa0669410:CDS |
| CAAATCTTTAAGATACGTAA+CGG | 0.651380 | 4_4:+11091511 | None:intergenic |
| ATCTAACGGATGAACTCAGT+AGG | 0.651486 | 4_4:-11090233 | Msa0669410:CDS |
| ACAGTAGAGGAACGCAAGCG+TGG | 0.652435 | 4_4:-11091869 | Msa0669410:CDS |
| TGTGGGATATGTGGTGCAGG+TGG | 0.666238 | 4_4:-11090060 | Msa0669410:CDS |
| AGGCATTTCATAGTCATATG+GGG | 0.667282 | 4_4:-11090863 | Msa0669410:CDS |
| TACCTTATCATACCCGCCAG+CGG | 0.668297 | 4_4:+11091607 | None:intergenic |
| TGGGCAGCAAGTCATATTCG+GGG | 0.668632 | 4_4:-11090924 | Msa0669410:CDS |
| TAATTCCCAATATGGGACTG+CGG | 0.669442 | 4_4:-11090745 | Msa0669410:CDS |
| TGTTGAACATACGGTTGGTG+CGG | 0.671951 | 4_4:-11091465 | Msa0669410:CDS |
| CGGTGTTACAGACCAGTCTG+AGG | 0.672130 | 4_4:-11090725 | Msa0669410:CDS |
| ACAGCAATGATATGCTCACA+AGG | 0.676151 | 4_4:+11090471 | None:intergenic |
| GCTGGCGGGTATGATAAGGT+AGG | 0.701917 | 4_4:-11091605 | Msa0669410:CDS |
| GGACGGAAATTCTGACGATG+TGG | 0.703394 | 4_4:-11092167 | Msa0669410:CDS |
| GAAGCAGATGATACTGGTGA+CGG | 0.713898 | 4_4:-11092355 | Msa0669410:CDS |
| AGGTTGAAGGGACATATGTG+TGG | 0.742861 | 4_4:-11091256 | Msa0669410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATATTTAGAATATCTAA+CGG | - | chr4_4:11092152-11092171 | Msa0669410:CDS | 10.0% |
| !! | CAAGTAATAAAAAATAAGAA+TGG | - | chr4_4:11090446-11090465 | Msa0669410:CDS | 15.0% |
| !! | TAAATGAATTGTATGAAAAA+AGG | - | chr4_4:11091446-11091465 | Msa0669410:CDS | 15.0% |
| !! | TTTGGAAATTTGAAAATCTT+TGG | - | chr4_4:11091380-11091399 | Msa0669410:CDS | 20.0% |
| !!! | AAAATCAGTCATATTCATTT+TGG | + | chr4_4:11091575-11091594 | None:intergenic | 20.0% |
| ! | AAACCAACAGTAAAAATTGT+AGG | + | chr4_4:11090393-11090412 | None:intergenic | 25.0% |
| ! | TTGATATAATTACTCAACGT+TGG | - | chr4_4:11090603-11090622 | Msa0669410:CDS | 25.0% |
| !! | ACAAAGAAAAGTGATGTTTT+CGG | - | chr4_4:11090853-11090872 | Msa0669410:CDS | 25.0% |
| !!! | CAAATCTTTAAGATACGTAA+CGG | + | chr4_4:11090891-11090910 | None:intergenic | 25.0% |
| !!! | GCATACATCTTTTGAAAAAT+GGG | + | chr4_4:11091345-11091364 | None:intergenic | 25.0% |
| !!! | AGCATACATCTTTTGAAAAA+TGG | + | chr4_4:11091346-11091365 | None:intergenic | 25.0% |
| !!! | TTTTTCAAAAGATGTATGCT+TGG | - | chr4_4:11091346-11091365 | Msa0669410:CDS | 25.0% |
| !!! | TGAAAATCTTTGGAATGATA+TGG | - | chr4_4:11091390-11091409 | Msa0669410:CDS | 25.0% |
| ! | AATGATATGGTTGAAAAGTT+CGG | - | chr4_4:11091403-11091422 | Msa0669410:CDS | 25.0% |
| ! | TGTATGAAAAAAGGAAAATG+TGG | - | chr4_4:11091455-11091474 | Msa0669410:CDS | 25.0% |
| ! | GTATGAAAAAAGGAAAATGT+GGG | - | chr4_4:11091456-11091475 | Msa0669410:CDS | 25.0% |
| !!! | CTGATTTTAATTCCCAATAT+GGG | - | chr4_4:11091647-11091666 | Msa0669410:CDS | 25.0% |
| !!! | AGTATCAAGTATCGATATTA+GGG | + | chr4_4:11091776-11091795 | None:intergenic | 25.0% |
| ! | ATTAGAGGTAATTACAATGA+TGG | - | chr4_4:11092027-11092046 | Msa0669410:CDS | 25.0% |
| ! | GGTTTCTGATTTATCATATA+AGG | - | chr4_4:11092113-11092132 | Msa0669410:CDS | 25.0% |
| ! | AATATCATTACTTAATCGCA+AGG | + | chr4_4:11092439-11092458 | None:intergenic | 25.0% |
| TGTTGACGATATTGTAAAGA+TGG | - | chr4_4:11090307-11090326 | Msa0669410:CDS | 30.0% | |
| ! | TTGCCTACAATTTTTACTGT+TGG | - | chr4_4:11090387-11090406 | Msa0669410:CDS | 30.0% |
| ATCAATATGCACACGAAATT+TGG | + | chr4_4:11090588-11090607 | None:intergenic | 30.0% | |
| CATATCATGATTGTGATCAA+AGG | + | chr4_4:11090645-11090664 | None:intergenic | 30.0% | |
| ! | AAGATTCAAGTTACCAACTT+TGG | - | chr4_4:11090722-11090741 | Msa0669410:CDS | 30.0% |
| ATCAAAGTTACGCAAATGAT+TGG | - | chr4_4:11090755-11090774 | Msa0669410:CDS | 30.0% | |
| ! | TAAGGTAGGATTTCTGAAAA+AGG | - | chr4_4:11090808-11090827 | Msa0669410:CDS | 30.0% |
| ! | ACTGATGTTTGTTGAACATA+CGG | - | chr4_4:11090925-11090944 | Msa0669410:CDS | 30.0% |
| !!! | AACACTTATTTTGGAGTGAT+GGG | - | chr4_4:11090969-11090988 | Msa0669410:CDS | 30.0% |
| !!! | TGTCCATTTGTTGTTTTTTC+TGG | - | chr4_4:11091067-11091086 | Msa0669410:CDS | 30.0% |
| ACACCAGAAAAAACAACAAA+TGG | + | chr4_4:11091073-11091092 | None:intergenic | 30.0% | |
| ACCATCTGTTATTACAGAAA+CGG | + | chr4_4:11091209-11091228 | None:intergenic | 30.0% | |
| TATTTCCCAAGAGTTATCAT+AGG | - | chr4_4:11091260-11091279 | Msa0669410:CDS | 30.0% | |
| CATAACCTATGATAACTCTT+GGG | + | chr4_4:11091268-11091287 | None:intergenic | 30.0% | |
| ACATAACCTATGATAACTCT+TGG | + | chr4_4:11091269-11091288 | None:intergenic | 30.0% | |
| ! | TGCATATTTTCGTTTCAAAG+AGG | - | chr4_4:11091618-11091637 | Msa0669410:CDS | 30.0% |
| ATTGGGAATTAAAATCAGCT+TGG | + | chr4_4:11091645-11091664 | None:intergenic | 30.0% | |
| !!! | GCTGATTTTAATTCCCAATA+TGG | - | chr4_4:11091646-11091665 | Msa0669410:CDS | 30.0% |
| TACCAAAGAAATATTCGAGA+TGG | - | chr4_4:11091726-11091745 | Msa0669410:CDS | 30.0% | |
| TACCATCTCGAATATTTCTT+TGG | + | chr4_4:11091731-11091750 | None:intergenic | 30.0% | |
| AAGAAATATTCGAGATGGTA+CGG | - | chr4_4:11091731-11091750 | Msa0669410:CDS | 30.0% | |
| !! | GAGTATCAAGTATCGATATT+AGG | + | chr4_4:11091777-11091796 | None:intergenic | 30.0% |
| TGTCTTAGAATGGAATCTAT+TGG | - | chr4_4:11091901-11091920 | Msa0669410:CDS | 30.0% | |
| !! | GAATTTGGTGTATCTTAGTA+AGG | - | chr4_4:11092089-11092108 | Msa0669410:CDS | 30.0% |
| ACTTGAGCATGTAAATTATC+AGG | + | chr4_4:11092222-11092241 | None:intergenic | 30.0% | |
| TGATAATTTACATGCTCAAG+TGG | - | chr4_4:11092221-11092240 | Msa0669410:CDS | 30.0% | |
| GAAAGTGATGAAGCTTTCTT+AGG | - | chr4_4:11090140-11090159 | Msa0669410:CDS | 35.0% | |
| GAAGATGATTATTCCGTTGA+TGG | - | chr4_4:11090176-11090195 | Msa0669410:CDS | 35.0% | |
| AATTTCACATGCAGATGATG+AGG | - | chr4_4:11090205-11090224 | Msa0669410:CDS | 35.0% | |
| ! | ATGTTTCGAAGCTGCTATTT+GGG | - | chr4_4:11090354-11090373 | Msa0669410:CDS | 35.0% |
| !! | TGTTGGTTTGCAAAGATGAA+CGG | - | chr4_4:11090404-11090423 | Msa0669410:CDS | 35.0% |
| ACATTTGTGTGCAATCTAGA+AGG | - | chr4_4:11090485-11090504 | Msa0669410:CDS | 35.0% | |
| ! | TGTGCAATCTAGAAGGTTTT+AGG | - | chr4_4:11090492-11090511 | Msa0669410:CDS | 35.0% |
| CATTTGCGTAACTTTGATTC+CGG | + | chr4_4:11090753-11090772 | None:intergenic | 35.0% | |
| GTATGTTCAACAAACATCAG+TGG | + | chr4_4:11090926-11090945 | None:intergenic | 35.0% | |
| ! | ATGTTTGTTGAACATACGGT+TGG | - | chr4_4:11090929-11090948 | Msa0669410:CDS | 35.0% |
| !!! | CAACACTTATTTTGGAGTGA+TGG | - | chr4_4:11090968-11090987 | Msa0669410:CDS | 35.0% |
| !!! | ACACTTATTTTGGAGTGATG+GGG | - | chr4_4:11090970-11090989 | Msa0669410:CDS | 35.0% |
| CAGAAGAATTTCGAAGTCTT+TGG | - | chr4_4:11090998-11091017 | Msa0669410:CDS | 35.0% | |
| CAAAAATGATTGTCTGGTTG+TGG | + | chr4_4:11091102-11091121 | None:intergenic | 35.0% | |
| CAGTAGCAAAAATGATTGTC+TGG | + | chr4_4:11091108-11091127 | None:intergenic | 35.0% | |
| TTCAACCTCATTAGCAACAA+CGG | + | chr4_4:11091131-11091150 | None:intergenic | 35.0% | |
| TTGTTGCTAATGAGGTTGAA+GGG | - | chr4_4:11091131-11091150 | Msa0669410:CDS | 35.0% | |
| !!! | ACAGTTTTTGGTTGCAATGA+AGG | - | chr4_4:11091174-11091193 | Msa0669410:CDS | 35.0% |
| !!! | CAGTTTTTGGTTGCAATGAA+GGG | - | chr4_4:11091175-11091194 | Msa0669410:CDS | 35.0% |
| CCATCTGTTATTACAGAAAC+GGG | + | chr4_4:11091208-11091227 | None:intergenic | 35.0% | |
| GTTATCATAGGTTATGTGCA+TGG | - | chr4_4:11091272-11091291 | Msa0669410:CDS | 35.0% | |
| TGTTAGATATTGCATTCCGT+AGG | + | chr4_4:11091303-11091322 | None:intergenic | 35.0% | |
| CGGAATGCAATATCTAACAT+TGG | - | chr4_4:11091304-11091323 | Msa0669410:CDS | 35.0% | |
| ! | TGAGGCATTTCATAGTCATA+TGG | - | chr4_4:11091534-11091553 | Msa0669410:CDS | 35.0% |
| ! | GAGGCATTTCATAGTCATAT+GGG | - | chr4_4:11091535-11091554 | Msa0669410:CDS | 35.0% |
| AGGCATTTCATAGTCATATG+GGG | - | chr4_4:11091536-11091555 | Msa0669410:CDS | 35.0% | |
| ! | ATTTTGTTAAGCACTTCCAC+AGG | - | chr4_4:11091590-11091609 | Msa0669410:CDS | 35.0% |
| GTGTCAAAATATCAAGCAGA+AGG | - | chr4_4:11091826-11091845 | Msa0669410:CDS | 35.0% | |
| ATCAAGCAGAAGGTTATGTT+TGG | - | chr4_4:11091836-11091855 | Msa0669410:CDS | 35.0% | |
| TGCATGTTCTTGTCTTAGAA+TGG | - | chr4_4:11091891-11091910 | Msa0669410:CDS | 35.0% | |
| TGATGAATTTCCTAAGTCTC+TGG | - | chr4_4:11091969-11091988 | Msa0669410:CDS | 35.0% | |
| ACAATGATGGTTCACACTAT+TGG | - | chr4_4:11092040-11092059 | Msa0669410:CDS | 35.0% | |
| CAATGATGGTTCACACTATT+GGG | - | chr4_4:11092041-11092060 | Msa0669410:CDS | 35.0% | |
| ACACTATTGGGATTCTCATT+TGG | - | chr4_4:11092053-11092072 | Msa0669410:CDS | 35.0% | |
| ! | TTTGGTGTATCTTAGTAAGG+AGG | - | chr4_4:11092092-11092111 | Msa0669410:CDS | 35.0% |
| !! | AAAGCAAAGTATTGCGATGA+AGG | - | chr4_4:11092192-11092211 | Msa0669410:CDS | 35.0% |
| AGACATGAGAATGAAGCTGA+TGG | - | chr4_4:11089972-11089991 | Msa0669410:CDS | 40.0% | |
| GACATGAGAATGAAGCTGAT+GGG | - | chr4_4:11089973-11089992 | Msa0669410:CDS | 40.0% | |
| ACATGAGAATGAAGCTGATG+GGG | - | chr4_4:11089974-11089993 | Msa0669410:CDS | 40.0% | |
| TGAAATTTCCTCGCCATCAA+CGG | + | chr4_4:11090192-11090211 | None:intergenic | 40.0% | |
| ACATGCAGATGATGAGGATT+TGG | - | chr4_4:11090211-11090230 | Msa0669410:CDS | 40.0% | |
| GATGTTTCGAAGCTGCTATT+TGG | - | chr4_4:11090353-11090372 | Msa0669410:CDS | 40.0% | |
| !!! | TAGAAGGTTTTAGGAGAGAC+AGG | - | chr4_4:11090501-11090520 | Msa0669410:CDS | 40.0% |
| !!! | AGAAGGTTTTAGGAGAGACA+GGG | - | chr4_4:11090502-11090521 | Msa0669410:CDS | 40.0% |
| TGAGAAACATTGTGCATTGC+TGG | - | chr4_4:11090670-11090689 | Msa0669410:CDS | 40.0% | |
| ! | GTGATGTTTTCGGATGCTAA+AGG | - | chr4_4:11090863-11090882 | Msa0669410:CDS | 40.0% |
| ! | GTAGGCTGCAACACTTATTT+TGG | - | chr4_4:11090960-11090979 | Msa0669410:CDS | 40.0% |
| GTTGTTGCTAATGAGGTTGA+AGG | - | chr4_4:11091130-11091149 | Msa0669410:CDS | 40.0% | |
| CCCGTTTCTGTAATAACAGA+TGG | - | chr4_4:11091205-11091224 | Msa0669410:CDS | 40.0% | |
| CAGATGGTGATATAGCTATG+AGG | - | chr4_4:11091221-11091240 | Msa0669410:CDS | 40.0% | |
| TAGATATTGCATTCCGTAGG+AGG | + | chr4_4:11091300-11091319 | None:intergenic | 40.0% | |
| ! | TGCTTGGTGATCATGAAGTT+TGG | - | chr4_4:11091362-11091381 | Msa0669410:CDS | 40.0% |
| TCGGTCTTGAAGACAATAGA+TGG | - | chr4_4:11091422-11091441 | Msa0669410:CDS | 40.0% | |
| ATTCGGGGAAATTTCTTTGC+AGG | - | chr4_4:11091490-11091509 | Msa0669410:CDS | 40.0% | |
| CAGGAATAAGAACAACATCC+CGG | - | chr4_4:11091509-11091528 | Msa0669410:CDS | 40.0% | |
| GAAAATATGCAACACACCTG+TGG | + | chr4_4:11091609-11091628 | None:intergenic | 40.0% | |
| TAATTCCCAATATGGGACTG+CGG | - | chr4_4:11091654-11091673 | Msa0669410:CDS | 40.0% | |
| GGTACGGATAGTCATGAAAA+AGG | - | chr4_4:11091747-11091766 | Msa0669410:CDS | 40.0% | |
| CATGCAAAATCGTTGTTCGA+TGG | + | chr4_4:11091877-11091896 | None:intergenic | 40.0% | |
| ACAGCAATGATATGCTCACA+AGG | + | chr4_4:11091931-11091950 | None:intergenic | 40.0% | |
| TGAGCATATCATTGCTGTGA+TGG | - | chr4_4:11091933-11091952 | Msa0669410:CDS | 40.0% | |
| CGATTCAATACCAGAGACTT+AGG | + | chr4_4:11091982-11092001 | None:intergenic | 40.0% | |
| ! | AGTCTCTGGTATTGAATCGT+TGG | - | chr4_4:11091983-11092002 | Msa0669410:CDS | 40.0% |
| TCGTTGGTCACAATTTGCAA+AGG | - | chr4_4:11091999-11092018 | Msa0669410:CDS | 40.0% | |
| TTTGCAAAGGAGTCGATTAG+AGG | - | chr4_4:11092012-11092031 | Msa0669410:CDS | 40.0% | |
| ! | ATCTAACGGATGAACTCAGT+AGG | - | chr4_4:11092166-11092185 | Msa0669410:CDS | 40.0% |
| !! | CAAAGTATTGCGATGAAGGT+GGG | - | chr4_4:11092196-11092215 | Msa0669410:CDS | 40.0% |
| TTTACATGCTCAAGTGGAGT+TGG | - | chr4_4:11092227-11092246 | Msa0669410:CDS | 40.0% | |
| ACAACCTTTGCTTCTTGAAC+AGG | + | chr4_4:11092271-11092290 | None:intergenic | 40.0% | |
| TGTTCAAGAAGCAAAGGTTG+TGG | - | chr4_4:11092270-11092289 | Msa0669410:CDS | 40.0% | |
| TCTCCATCTGGATTAAGAGT+GGG | + | chr4_4:11092384-11092403 | None:intergenic | 40.0% | |
| TTCTCCATCTGGATTAAGAG+TGG | + | chr4_4:11092385-11092404 | None:intergenic | 40.0% | |
| GTACGAACAAATTCTCCATC+TGG | + | chr4_4:11092396-11092415 | None:intergenic | 40.0% | |
| AGAATGAAGCTGATGGGGAA+GGG | - | chr4_4:11089979-11089998 | Msa0669410:CDS | 45.0% | |
| GACAGTGAAGCAGATGATAC+TGG | - | chr4_4:11090014-11090033 | Msa0669410:CDS | 45.0% | |
| GACAGTGAAGCAGATGATAC+TGG | - | chr4_4:11090014-11090033 | Msa0669410:CDS | 45.0% | |
| GAAGCAGATGATACTGGTGA+CGG | - | chr4_4:11090020-11090039 | Msa0669410:CDS | 45.0% | |
| !! | GATGATAGTGGTGACAGTGA+AGG | - | chr4_4:11090074-11090093 | Msa0669410:CDS | 45.0% |
| !! | TGATTATTCCGTTGATGGCG+AGG | - | chr4_4:11090181-11090200 | Msa0669410:CDS | 45.0% |
| GCAGATGATGAGGATTTGGA+CGG | - | chr4_4:11090215-11090234 | Msa0669410:CDS | 45.0% | |
| !! | AGATGAACGGTTTTGCTGTG+AGG | - | chr4_4:11090417-11090436 | Msa0669410:CDS | 45.0% |
| !! | AACGGTTTTGCTGTGAGGAA+AGG | - | chr4_4:11090422-11090441 | Msa0669410:CDS | 45.0% |
| !!! | GAAGGTTTTAGGAGAGACAG+GGG | - | chr4_4:11090503-11090522 | Msa0669410:CDS | 45.0% |
| !!! | AAGGTTTTAGGAGAGACAGG+GGG | - | chr4_4:11090504-11090523 | Msa0669410:CDS | 45.0% |
| TGCTCATAGGAAGCTGACTA+AGG | - | chr4_4:11090694-11090713 | Msa0669410:CDS | 45.0% | |
| GTTACCAACTTTGGCAATGC+CGG | - | chr4_4:11090731-11090750 | Msa0669410:CDS | 45.0% | |
| ! | TGTTGAACATACGGTTGGTG+CGG | - | chr4_4:11090934-11090953 | Msa0669410:CDS | 45.0% |
| TACTGCCGTTGTTGCTAATG+AGG | - | chr4_4:11091123-11091142 | Msa0669410:CDS | 45.0% | |
| AGGTTGAAGGGACATATGTG+TGG | - | chr4_4:11091143-11091162 | Msa0669410:CDS | 45.0% | |
| ! | GTGGCTGTTGGAACAGTTTT+TGG | - | chr4_4:11091162-11091181 | Msa0669410:CDS | 45.0% |
| TGTGGGCAGCAAGTCATATT+CGG | - | chr4_4:11091473-11091492 | Msa0669410:CDS | 45.0% | |
| ACTATGAAATGCCTCACACC+GGG | + | chr4_4:11091530-11091549 | None:intergenic | 45.0% | |
| GACTATGAAATGCCTCACAC+CGG | + | chr4_4:11091531-11091550 | None:intergenic | 45.0% | |
| TAACACCGCAGTCCCATATT+GGG | + | chr4_4:11091662-11091681 | None:intergenic | 45.0% | |
| GGTTGCTAGACATGCGAATT+TGG | - | chr4_4:11092074-11092093 | Msa0669410:CDS | 45.0% | |
| !! | GCAAAGTATTGCGATGAAGG+TGG | - | chr4_4:11092195-11092214 | Msa0669410:CDS | 45.0% |
| CCTTTGCTTCTTGAACAGGA+AGG | + | chr4_4:11092267-11092286 | None:intergenic | 45.0% | |
| CCTTCCTGTTCAAGAAGCAA+AGG | - | chr4_4:11092264-11092283 | Msa0669410:CDS | 45.0% | |
| TGTCCCACTCTTAATCCAGA+TGG | - | chr4_4:11092378-11092397 | Msa0669410:CDS | 45.0% | |
| GAGAATGAAGCTGATGGGGA+AGG | - | chr4_4:11089978-11089997 | Msa0669410:CDS | 50.0% | |
| GAATGAAGCTGATGGGGAAG+GGG | - | chr4_4:11089980-11089999 | Msa0669410:CDS | 50.0% | |
| ! | GATGGGGAAGGGGATGATTT+TGG | - | chr4_4:11089990-11090009 | Msa0669410:CDS | 50.0% |
| !! | GATGATACTGGTGACGGTGA+AGG | - | chr4_4:11090050-11090069 | Msa0669410:CDS | 50.0% |
| GACGGTGAAGGAGATGATAG+TGG | - | chr4_4:11090062-11090081 | Msa0669410:CDS | 50.0% | |
| GGTGACAGTGAAGGAGATAG+TGG | - | chr4_4:11090083-11090102 | Msa0669410:CDS | 50.0% | |
| GGACGGAAATTCTGACGATG+TGG | - | chr4_4:11090232-11090251 | Msa0669410:CDS | 50.0% | |
| ! | GCTGCTATTTGGGAGTCTTG+AGG | - | chr4_4:11090364-11090383 | Msa0669410:CDS | 50.0% |
| AGACAGGGGGTTAACAGTAG+AGG | - | chr4_4:11090517-11090536 | Msa0669410:CDS | 50.0% | |
| CGTGGTCCGAAACATGAAAC+CGG | - | chr4_4:11090548-11090567 | Msa0669410:CDS | 50.0% | |
| GTGGTCCGAAACATGAAACC+GGG | - | chr4_4:11090549-11090568 | Msa0669410:CDS | 50.0% | |
| CCACACCCGGTTTCATGTTT+CGG | + | chr4_4:11090557-11090576 | None:intergenic | 50.0% | |
| ! | TTTGGCTTCACAACCACACC+CGG | + | chr4_4:11090570-11090589 | None:intergenic | 50.0% |
| GATTCCGGCATTGCCAAAGT+TGG | + | chr4_4:11090738-11090757 | None:intergenic | 50.0% | |
| TACCTTATCATACCCGCCAG+CGG | + | chr4_4:11090795-11090814 | None:intergenic | 50.0% | |
| AGGGACATATGTGTGGCTGT+TGG | - | chr4_4:11091150-11091169 | Msa0669410:CDS | 50.0% | |
| TATGTGCATGGCACCTCCTA+CGG | - | chr4_4:11091284-11091303 | Msa0669410:CDS | 50.0% | |
| GTGGGCAGCAAGTCATATTC+GGG | - | chr4_4:11091474-11091493 | Msa0669410:CDS | 50.0% | |
| TGGGCAGCAAGTCATATTCG+GGG | - | chr4_4:11091475-11091494 | Msa0669410:CDS | 50.0% | |
| AAGAACAACATCCCGGTGTG+AGG | - | chr4_4:11091516-11091535 | Msa0669410:CDS | 50.0% | |
| GTAACACCGCAGTCCCATAT+TGG | + | chr4_4:11091663-11091682 | None:intergenic | 50.0% | |
| ACCTAGCACGAGCAATGCAA+TGG | - | chr4_4:11092293-11092312 | Msa0669410:CDS | 50.0% | |
| CCTAGCACGAGCAATGCAAT+GGG | - | chr4_4:11092294-11092313 | Msa0669410:CDS | 50.0% | |
| GCAATGCAATGGGTCATCGT+CGG | - | chr4_4:11092304-11092323 | Msa0669410:CDS | 50.0% | |
| TCACAGACGTGTGGGATATG+TGG | - | chr4_4:11092330-11092349 | Msa0669410:CDS | 50.0% | |
| ACAGTAGAGGAACGCAAGCG+TGG | - | chr4_4:11090530-11090549 | Msa0669410:CDS | 55.0% | |
| CCGAAACATGAAACCGGGTG+TGG | - | chr4_4:11090554-11090573 | Msa0669410:CDS | 55.0% | |
| ! | GTGCATTGCTGGCTGCTCAT+AGG | - | chr4_4:11090681-11090700 | Msa0669410:CDS | 55.0% |
| ! | GCTGGCGGGTATGATAAGGT+AGG | - | chr4_4:11090794-11090813 | Msa0669410:CDS | 55.0% |
| ! | GAACATACGGTTGGTGCGGA+TGG | - | chr4_4:11090938-11090957 | Msa0669410:CDS | 55.0% |
| ! | ATACGGTTGGTGCGGATGGT+AGG | - | chr4_4:11090942-11090961 | Msa0669410:CDS | 55.0% |
| !! | CGGTGTTACAGACCAGTCTG+AGG | - | chr4_4:11091674-11091693 | Msa0669410:CDS | 55.0% |
| CCTCTCAAGTGACCTCAGAC+TGG | + | chr4_4:11091689-11091708 | None:intergenic | 55.0% | |
| ! | CCAGTCTGAGGTCACTTGAG+AGG | - | chr4_4:11091686-11091705 | Msa0669410:CDS | 55.0% |
| CCCATTGCATTGCTCGTGCT+AGG | + | chr4_4:11092297-11092316 | None:intergenic | 55.0% | |
| ACGTGTGGGATATGTGGTGC+AGG | - | chr4_4:11092336-11092355 | Msa0669410:CDS | 55.0% | |
| TGTGGGATATGTGGTGCAGG+TGG | - | chr4_4:11092339-11092358 | Msa0669410:CDS | 55.0% | |
| GGTGCGTTTGCAAATGCCGC+TGG | - | chr4_4:11090776-11090795 | Msa0669410:CDS | 60.0% | |
| GCGTTTGCAAATGCCGCTGG+CGG | - | chr4_4:11090779-11090798 | Msa0669410:CDS | 60.0% | |
| CGTTTGCAAATGCCGCTGGC+GGG | - | chr4_4:11090780-11090799 | Msa0669410:CDS | 60.0% | |
| ! | TGCCGCTGGCGGGTATGATA+AGG | - | chr4_4:11090790-11090809 | Msa0669410:CDS | 60.0% |
| GTCGGCGATCACAGACGTGT+GGG | - | chr4_4:11092322-11092341 | Msa0669410:CDS | 60.0% | |
| CGTCGGCGATCACAGACGTG+TGG | - | chr4_4:11092321-11092340 | Msa0669410:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 11089960 | 11092461 | 11089960 | ID=Msa0669410;Name=Msa0669410 |
| chr4_4 | mRNA | 11089960 | 11092461 | 11089960 | ID=Msa0669410-mRNA-1;Parent=Msa0669410;Name=Msa0669410-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|-1|0|1|-1|1|1|0|833 |
| chr4_4 | exon | 11089960 | 11092461 | 11089960 | ID=Msa0669410-mRNA-1:exon:3358;Parent=Msa0669410-mRNA-1 |
| chr4_4 | CDS | 11089960 | 11092461 | 11089960 | ID=Msa0669410-mRNA-1:cds;Parent=Msa0669410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
