AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0521270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521270 MtrunA17_Chr3g0137541 82.468 154 2 2 1 154 1 129 4.97e-90 278
Msa0521270 MtrunA17_Chr2g0333251 44.526 137 50 3 15 150 45 156 8.51e-32 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521270 AT4G32160.1 64.935 154 29 2 1 154 2 130 5.23e-71 229
Msa0521270 AT2G25350.1 60.390 154 36 2 1 154 1 129 4.94e-67 216
Msa0521270 AT2G25350.2 60.390 154 36 2 1 154 1 129 6.46e-66 214
Msa0521270 AT2G25350.4 60.390 154 36 2 1 154 1 129 1.42e-62 201
Msa0521270 AT2G25350.5 60.390 154 36 2 1 154 1 129 1.79e-62 203
Msa0521270 AT2G25350.3 60.390 154 36 2 1 154 1 129 1.79e-62 203
Msa0521270 AT3G15920.1 55.629 151 42 3 4 154 64 189 4.64e-54 184

Find 199 sgRNAs with CRISPR-Local

Find 447 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTCACATTTCTCCTTTA+TGG 0.098755 3_4:-73941438 None:intergenic
TCATATGATTCTTCACTTCT+AGG 0.124218 3_4:+73940333 Msa0521270:three_prime_UTR
GGTAGTGACATGTCTAATTT+TGG 0.135817 3_4:+73940462 Msa0521270:three_prime_UTR
GGATCTGAATTCTTTGATTT+TGG 0.143999 3_4:-73936760 None:intergenic
TATTGATGAGGGTTTGTTTA+TGG 0.150863 3_4:+73940212 Msa0521270:three_prime_UTR
TTGTTGCATGTTTGGGATTA+TGG 0.172769 3_4:+73938942 Msa0521270:CDS
GCCTGGGCATGCTAAAGTTT+TGG 0.180319 3_4:+73940383 Msa0521270:three_prime_UTR
TGTACACGTGGCTTCTTTAA+TGG 0.199414 3_4:-73935299 None:intergenic
TTACTAGCATGTTGAAAATT+AGG 0.201435 3_4:+73939037 Msa0521270:exon
CACCGAATAATCCGTGTTAT+TGG 0.207210 3_4:-73939980 None:intergenic
GGAGTCCTGCACCTCGAAAA+TGG 0.227854 3_4:+73935626 Msa0521270:CDS
TCCCGCCCATTCTGTGTAAT+TGG 0.256896 3_4:-73936667 None:intergenic
AATACCAATTGTTGCATGTT+TGG 0.266400 3_4:+73938934 Msa0521270:CDS
TTATCATCCTGTCCAATTCT+TGG 0.267529 3_4:-73940105 None:intergenic
TCATCTGTTGCGTCAGATTA+TGG 0.273295 3_4:+73940045 Msa0521270:three_prime_UTR
GATGGCTCTGTCGACCTTCC+TGG 0.289026 3_4:+73940504 Msa0521270:three_prime_UTR
ATTGATGAGGGTTTGTTTAT+GGG 0.291776 3_4:+73940213 Msa0521270:three_prime_UTR
ATTGCATTATAATACCTTCT+TGG 0.298355 3_4:+73936728 Msa0521270:CDS
GAGCCATCACCAGATGAATT+TGG 0.300939 3_4:-73940489 None:intergenic
GATCATATCAGATTTGTTCT+TGG 0.302019 3_4:+73942298 Msa0521270:three_prime_UTR
ATAGAGAAGCTTGTAAAATA+TGG 0.308920 3_4:+73940180 Msa0521270:three_prime_UTR
ATCTGTTCAGGTCAAGGATT+TGG 0.309445 3_4:+73940922 Msa0521270:intron
CAAGGGAGATATTAAAGTTC+TGG 0.313417 3_4:+73941355 Msa0521270:three_prime_UTR
GTTCCTTCTTCAATTCTGTT+TGG 0.316758 3_4:-73941406 None:intergenic
TTCCTTCTTCAATTCTGTTT+GGG 0.323271 3_4:-73941405 None:intergenic
TACTCAAATGCAATGGGATA+TGG 0.328309 3_4:+73941021 Msa0521270:three_prime_UTR
GCAGAACGATGTGCTGTTGC+AGG 0.334516 3_4:+73941265 Msa0521270:three_prime_UTR
CTTGATTTAATCTAACTATA+AGG 0.336717 3_4:-73940689 None:intergenic
TGGATATTTGTAATCCCTTC+TGG 0.337338 3_4:-73937722 None:intergenic
GCTGTCTATGTAGCTTAAAA+AGG 0.340648 3_4:+73938809 Msa0521270:intron
CATTCAGTACTGGGCATGTT+AGG 0.340760 3_4:+73936041 Msa0521270:CDS
TTCCAATAACACGGATTATT+CGG 0.345896 3_4:+73939978 Msa0521270:three_prime_UTR
ATACCAATTGTTGCATGTTT+GGG 0.352344 3_4:+73938935 Msa0521270:CDS
TTGCATTATAATACCTTCTT+GGG 0.352481 3_4:+73936729 Msa0521270:CDS
CGACCTTCCTGGATCTGCTT+CGG 0.362574 3_4:+73940515 Msa0521270:three_prime_UTR
TACAAGGCATGCTCTCAAAT+TGG 0.362742 3_4:+73942355 Msa0521270:three_prime_UTR
TTGATCAACTTTACCACTAT+AGG 0.370104 3_4:-73936781 None:intergenic
CACACAAAATTGAAAAGTTC+TGG 0.370980 3_4:+73940564 Msa0521270:three_prime_UTR
GCTACAGAGAAGGCGCTCTT+TGG 0.378552 3_4:+73939704 Msa0521270:intron
TACATTAGAAGCTGCACTTC+CGG 0.379999 3_4:-73942222 None:intergenic
ATTGAAAAGCCGAGCTTTGT+TGG 0.385083 3_4:+73938881 Msa0521270:CDS
TGTAAAATTAACTCGCCTAT+AGG 0.396509 3_4:-73942515 None:intergenic
GTGCAATCATCTCTCCATTC+GGG 0.402724 3_4:+73940000 Msa0521270:three_prime_UTR
TAGACGGAAGTCACTGGAAA+TGG 0.403568 3_4:+73941051 Msa0521270:three_prime_UTR
CCCTTTCCAATTACACAGAA+TGG 0.404012 3_4:+73936661 Msa0521270:CDS
TTTCAATCGCATGAGTCCCT+TGG 0.410016 3_4:-73938865 None:intergenic
CAGAACTTTAATATCTCCCT+TGG 0.410861 3_4:-73941354 None:intergenic
CGAGCTTTGTTGGAAGAGGT+TGG 0.415118 3_4:+73938891 Msa0521270:CDS
GAAGTAGGAACTCCAAGAAT+TGG 0.415171 3_4:+73940093 Msa0521270:three_prime_UTR
AGTCCCTTGGGTGGCGCTGG+AGG 0.415381 3_4:-73938852 None:intergenic
ATCAATGTCAGACAATAGTT+TGG 0.415454 3_4:-73939739 None:intergenic
TAATCAAAATTTGCAATTGA+CGG 0.415681 3_4:-73935470 None:intergenic
CTGCTAGTAGGATGTCAATT+TGG 0.416430 3_4:-73942029 None:intergenic
GTCCCATCGTGTCTATGCTT+TGG 0.417043 3_4:-73935577 None:intergenic
CACTGCCTCTTGGCATGGAT+TGG 0.421999 3_4:+73935605 Msa0521270:CDS
TTCAATCGCATGAGTCCCTT+GGG 0.424288 3_4:-73938864 None:intergenic
TTTGGGATTCCAAATTCATC+TGG 0.424544 3_4:+73940480 Msa0521270:three_prime_UTR
GGTGCAATCATCTCTCCATT+CGG 0.424766 3_4:+73939999 Msa0521270:three_prime_UTR
CACTTCCGGTGTCCTTCTCT+AGG 0.431799 3_4:-73942208 None:intergenic
TTCGCCACTGCCTCTTGGCA+TGG 0.432596 3_4:+73935600 Msa0521270:CDS
CGTAACATTGTTCACATGTC+TGG 0.436461 3_4:-73940286 None:intergenic
ATGAGTCCCTTGGGTGGCGC+TGG 0.437452 3_4:-73938855 None:intergenic
GAGCTTTGTTGGAAGAGGTT+GGG 0.443540 3_4:+73938892 Msa0521270:CDS
CTGTGAATTTACCTTTGGAC+TGG 0.444137 3_4:-73936068 None:intergenic
ACGATGATTGTGTGGCCATT+CGG 0.444748 3_4:-73936692 None:intergenic
CTTGAAACCGAAGCAGATCC+AGG 0.444794 3_4:-73940522 None:intergenic
ACTATTCTAGAGCAATTAGA+AGG 0.445905 3_4:+73940240 Msa0521270:three_prime_UTR
GGGACTTCGCCACTGCCTCT+TGG 0.448090 3_4:+73935595 Msa0521270:CDS
TGAAAGAGAAAAGAGTGAAC+AGG 0.451485 3_4:+73941849 Msa0521270:three_prime_UTR
GGAACTTAGTGAGTCCATAA+AGG 0.452089 3_4:+73941424 Msa0521270:three_prime_UTR
GTCCCTTGGGTGGCGCTGGA+GGG 0.458980 3_4:-73938851 None:intergenic
AATCCCAAACATGCAACAAT+TGG 0.460348 3_4:-73938938 None:intergenic
TAATCCGTGTTATTGGAATC+AGG 0.462417 3_4:-73939973 None:intergenic
TCATTAAAGGACAGTTCTAC+AGG 0.462888 3_4:+73937678 Msa0521270:intron
CAGGATGATAATTCTGAAGT+TGG 0.463087 3_4:+73940117 Msa0521270:three_prime_UTR
ATCAACGCAATAAACTGAAC+AGG 0.468232 3_4:+73940613 Msa0521270:three_prime_UTR
AGACATGTGAACAATGTTAC+GGG 0.471076 3_4:+73940288 Msa0521270:three_prime_UTR
ACAGAGAAGGCGCTCTTTGG+AGG 0.477031 3_4:+73939707 Msa0521270:intron
TATAATGCAATAACTCCAAC+CGG 0.477943 3_4:-73936716 None:intergenic
AAGATTTACTCAAATGCAAT+GGG 0.480298 3_4:+73941015 Msa0521270:three_prime_UTR
GATGAAACTTAAATCTGAAT+CGG 0.484800 3_4:+73941075 Msa0521270:three_prime_UTR
CCTTTCCAATTACACAGAAT+GGG 0.485927 3_4:+73936662 Msa0521270:CDS
TCGGGCTTATCATTAGCTGC+TGG 0.487638 3_4:+73940018 Msa0521270:three_prime_UTR
TGCAAAATAATTATTCGTAC+AGG 0.489877 3_4:-73942569 None:intergenic
TTCTCCGATCGGATCGATGA+AGG 0.492549 3_4:-73935428 None:intergenic
TGTGAATTTACCTTTGGACT+GGG 0.495993 3_4:-73936067 None:intergenic
GAGTCCTGCACCTCGAAAAT+GGG 0.496052 3_4:+73935627 Msa0521270:CDS
TATTAAAGTTCTGGTTAAAG+AGG 0.500220 3_4:+73941364 Msa0521270:three_prime_UTR
AAGCTTTCAAATGAAAGTGT+TGG 0.501521 3_4:+73940417 Msa0521270:three_prime_UTR
AATGAAAGTGTTGGAAGTGA+TGG 0.501811 3_4:+73940426 Msa0521270:three_prime_UTR
TTCAAGAGAAACAGATATTG+TGG 0.502530 3_4:+73940539 Msa0521270:three_prime_UTR
TCAATTCTGTTTGGGAACTA+CGG 0.503298 3_4:-73941397 None:intergenic
CTGGCATTTACTTTATGCCT+AGG 0.504098 3_4:-73940267 None:intergenic
AAGCCGAGCTTTGTTGGAAG+AGG 0.504103 3_4:+73938887 Msa0521270:CDS
CCATTCTGTGTAATTGGAAA+GGG 0.504200 3_4:-73936661 None:intergenic
CCATCGTGTCTATGCTTTGG+AGG 0.506070 3_4:-73935574 None:intergenic
AGATGCTGCTAGAGAGCAGC+TGG 0.507403 3_4:+73941292 Msa0521270:three_prime_UTR
GCGTAAGCACAGTGGAAGAA+TGG 0.510389 3_4:-73935391 None:intergenic
GATCGTTTACTGAATTCTGC+TGG 0.511534 3_4:-73939951 None:intergenic
CAGACATGTGAACAATGTTA+CGG 0.513568 3_4:+73940287 Msa0521270:three_prime_UTR
CAACCTCTTCCAACAAAGCT+CGG 0.515780 3_4:-73938890 None:intergenic
CATCCCTCCAGCGCCACCCA+AGG 0.522811 3_4:+73938848 Msa0521270:CDS
GTGAACAGGCAGAAACTGCT+TGG 0.523674 3_4:+73941863 Msa0521270:three_prime_UTR
TGAACCTTCTTAGTACTCCA+TGG 0.524087 3_4:-73937742 None:intergenic
AAAGAATTCAGATCCTATAG+TGG 0.524287 3_4:+73936768 Msa0521270:CDS
TCCAATTACACAGAATGGGC+GGG 0.525347 3_4:+73936666 Msa0521270:CDS
AGTAATTAAATTCAAGCAAG+AGG 0.527343 3_4:-73938977 None:intergenic
AAAGATTTACTCAAATGCAA+TGG 0.527444 3_4:+73941014 Msa0521270:three_prime_UTR
TTCTTTCGACCATGCAGAGA+AGG 0.532922 3_4:+73940637 Msa0521270:three_prime_UTR
AGGAACTCCAAGAATTGGAC+AGG 0.533535 3_4:+73940098 Msa0521270:three_prime_UTR
AAATTTGCAATTGACGGCAC+CGG 0.537631 3_4:-73935464 None:intergenic
TAACTTGTACCTCTGCTAGT+AGG 0.539656 3_4:-73942041 None:intergenic
CAATCCATGCCAAGAGGCAG+TGG 0.540638 3_4:-73935604 None:intergenic
CCCATTCTGTGTAATTGGAA+AGG 0.540748 3_4:-73936662 None:intergenic
GGAACTTAGACGGAAGTCAC+TGG 0.542430 3_4:+73941045 Msa0521270:three_prime_UTR
ATCCCTCCAGCGCCACCCAA+GGG 0.543505 3_4:+73938849 Msa0521270:CDS
AAATCAAGAAATAGCTGCAA+AGG 0.546074 3_4:+73940704 Msa0521270:three_prime_UTR
AGTGGAGTCAAGGTCAAAAG+TGG 0.546119 3_4:-73942465 None:intergenic
TGATACCAGGATGGAAATGT+TGG 0.546262 3_4:+73941212 Msa0521270:intron
AGAAAACAGCTTGAGAAATG+TGG 0.546835 3_4:+73941886 Msa0521270:three_prime_UTR
GGCATATCAAATATTGATGA+GGG 0.547371 3_4:+73940201 Msa0521270:three_prime_UTR
CCCAAAACTTTAGCATGCCC+AGG 0.547727 3_4:-73940384 None:intergenic
AAAACCAATGACATAAAAGA+TGG 0.549854 3_4:+73942248 Msa0521270:three_prime_UTR
AACAGACAAACCGTGTTACA+AGG 0.550327 3_4:+73942339 Msa0521270:three_prime_UTR
AGCAATTAGAAGGACTTCCT+AGG 0.550544 3_4:+73940250 Msa0521270:three_prime_UTR
TCGTACAGGTATACATACAC+TGG 0.551025 3_4:-73942555 None:intergenic
GCTGGAGGGATGTTTCTCCT+TGG 0.553615 3_4:-73938837 None:intergenic
CCATACGATGCATCGGAAGT+AGG 0.554564 3_4:+73940078 Msa0521270:three_prime_UTR
TCAAGAGAAACAGATATTGT+GGG 0.554679 3_4:+73940540 Msa0521270:three_prime_UTR
AGCGGATGAGAGAATCCTAT+AGG 0.557149 3_4:+73942500 Msa0521270:three_prime_UTR
CGTACAGGTATACATACACT+GGG 0.557253 3_4:-73942554 None:intergenic
AAATAAGGAGAACTTGCAGC+AGG 0.557345 3_4:+73940973 Msa0521270:three_prime_UTR
TTTGGCACGAAGACCCAAGA+AGG 0.558048 3_4:-73936742 None:intergenic
GAAGGCGCTCTTTGGAGGAG+TGG 0.558280 3_4:+73939712 Msa0521270:three_prime_UTR
GAAAACAGCTTGAGAAATGT+GGG 0.559042 3_4:+73941887 Msa0521270:three_prime_UTR
GAAGGGATTACAAATATCCA+TGG 0.563612 3_4:+73937725 Msa0521270:CDS
AGCAGGCTATTCTGATTGAG+AGG 0.569251 3_4:+73940990 Msa0521270:three_prime_UTR
CCTACTTCCGATGCATCGTA+TGG 0.569440 3_4:-73940078 None:intergenic
ATATCCATGGAGTACTAAGA+AGG 0.570085 3_4:+73937738 Msa0521270:CDS
AGTGACTAGCCTTCTCTGCA+TGG 0.570494 3_4:-73940646 None:intergenic
TTCTGTGTAATTGGAAAGGG+AGG 0.573428 3_4:-73936658 None:intergenic
TTCCTTACGAAGATGAGGAC+AGG 0.574686 3_4:+73941947 Msa0521270:three_prime_UTR
GTCCTGTCCTCATCTTCGTA+AGG 0.577035 3_4:-73941949 None:intergenic
TTCCCAAACAGAATTGAAGA+AGG 0.577388 3_4:+73941403 Msa0521270:three_prime_UTR
TTAATTACTTTATACAAACA+TGG 0.578237 3_4:+73938991 Msa0521270:CDS
AGTTTATTGCGTTGATCTAG+CGG 0.578865 3_4:-73940606 None:intergenic
ATTCCAAATTCATCTGGTGA+TGG 0.581544 3_4:+73940486 Msa0521270:three_prime_UTR
AAAGCTAGGGTTTCTCCGAT+CGG 0.588212 3_4:-73935439 None:intergenic
TGGCATATCAAATATTGATG+AGG 0.588442 3_4:+73940200 Msa0521270:three_prime_UTR
TATTGCGTTGATCTAGCGGA+AGG 0.591173 3_4:-73940602 None:intergenic
TCAAATGCAATGGGATATGG+AGG 0.591718 3_4:+73941024 Msa0521270:three_prime_UTR
ATAGGATTCTCTCATCCGCT+AGG 0.593903 3_4:-73942497 None:intergenic
CGATCCTGATTCCAATAACA+CGG 0.596415 3_4:+73939969 Msa0521270:three_prime_UTR
TTCCAATTACACAGAATGGG+CGG 0.596800 3_4:+73936665 Msa0521270:CDS
TTCTTCCACTGTGCTTACGC+CGG 0.599298 3_4:+73935394 Msa0521270:five_prime_UTR
AATCGCATGAGTCCCTTGGG+TGG 0.600840 3_4:-73938861 None:intergenic
TGATATATCAAGATGTGCAT+CGG 0.601858 3_4:+73939758 Msa0521270:three_prime_UTR
CAGCTAATGATAAGCCCGAA+TGG 0.603033 3_4:-73940014 None:intergenic
GTTTCGTGTGTTTGTACACG+TGG 0.606197 3_4:-73935311 None:intergenic
AAAGGAGAAATGTGAAGCTG+AGG 0.606470 3_4:+73941442 Msa0521270:three_prime_UTR
AGAGCTAGAAGCAAAATCCA+AGG 0.606575 3_4:+73941337 Msa0521270:three_prime_UTR
TGATACTCCATACGATGCAT+CGG 0.607028 3_4:+73940071 Msa0521270:three_prime_UTR
TGAGAGCATGCCTTGTAACA+CGG 0.610568 3_4:-73942349 None:intergenic
ACGGGGAAGGACAGAAGTAA+TGG 0.612467 3_4:+73940306 Msa0521270:three_prime_UTR
GATGAAGGAGGAATCTATGC+CGG 0.615324 3_4:-73935413 None:intergenic
GAGCTAGAAGCAAAATCCAA+GGG 0.616666 3_4:+73941338 Msa0521270:three_prime_UTR
TGATCTTCCTTACGAAGATG+AGG 0.618623 3_4:+73941942 Msa0521270:three_prime_UTR
TAAGAGTTGAAGCGGTAACG+TGG 0.620400 3_4:-73935361 None:intergenic
CGAAACACGCACGACACTCA+CGG 0.626768 3_4:+73935328 Msa0521270:five_prime_UTR
TGTTGGTCAGAATTTGACAA+AGG 0.626931 3_4:+73941229 Msa0521270:three_prime_UTR
TGGCCACACAATCATCGTAC+CGG 0.627130 3_4:+73936697 Msa0521270:CDS
TGTGAACAATGTTACGGGGA+AGG 0.627354 3_4:+73940293 Msa0521270:three_prime_UTR
GGGATATGGAGGAACTTAGA+CGG 0.628005 3_4:+73941035 Msa0521270:three_prime_UTR
CAGTTCTACAGGCTTCAAGT+TGG 0.629348 3_4:+73937689 Msa0521270:intron
GCAGGCTATTCTGATTGAGA+GGG 0.632177 3_4:+73940991 Msa0521270:three_prime_UTR
TCAGGTAGAAAACCTAGAGA+AGG 0.633522 3_4:+73942196 Msa0521270:intron
TGTTAGGACTCCCAGTCCAA+AGG 0.633722 3_4:+73936057 Msa0521270:CDS
GTTGGTATACAATCACCAGA+AGG 0.635623 3_4:+73937707 Msa0521270:CDS
TTGGTATACAATCACCAGAA+GGG 0.638434 3_4:+73937708 Msa0521270:CDS
CTCCAAAGCATAGACACGAT+GGG 0.638679 3_4:+73935575 Msa0521270:CDS
AAACCGAAGCAGATCCAGGA+AGG 0.639921 3_4:-73940518 None:intergenic
AATTGACATCCTACTAGCAG+AGG 0.643598 3_4:+73942032 Msa0521270:three_prime_UTR
AGAATGGGCGGGATACCGAA+TGG 0.643780 3_4:+73936677 Msa0521270:CDS
TATATCAAGATGTGCATCGG+TGG 0.647391 3_4:+73939761 Msa0521270:three_prime_UTR
TCCTCCTTCATCGATCCGAT+CGG 0.648106 3_4:+73935424 Msa0521270:five_prime_UTR
CACACAATCATCGTACCGGT+TGG 0.650920 3_4:+73936701 Msa0521270:CDS
GCGCACGCTAAGAGTTGAAG+CGG 0.651249 3_4:-73935369 None:intergenic
CCTCCAAAGCATAGACACGA+TGG 0.653421 3_4:+73935574 Msa0521270:CDS
TCCGATCGGATCGATGAAGG+AGG 0.656474 3_4:-73935425 None:intergenic
AGGCTGAGAGAAAAGCTCCA+TGG 0.658284 3_4:-73940364 None:intergenic
ACTTCTAGGTAATAATACCA+TGG 0.661220 3_4:+73940347 Msa0521270:three_prime_UTR
CAACCGGTACGATGATTGTG+TGG 0.666909 3_4:-73936700 None:intergenic
GGACTCCAATCCATGCCAAG+AGG 0.690067 3_4:-73935610 None:intergenic
GAAAACCTAGAGAAGGACAC+CGG 0.699203 3_4:+73942203 Msa0521270:three_prime_UTR
GACATGTGAACAATGTTACG+GGG 0.707256 3_4:+73940289 Msa0521270:three_prime_UTR
ATAAAAGATGGTGTAATCTG+TGG 0.709015 3_4:+73942260 Msa0521270:three_prime_UTR
CTATGCCGGCGTAAGCACAG+TGG 0.709743 3_4:-73935399 None:intergenic
AGTGATGGAAGCTCAATACG+AGG 0.752524 3_4:+73940441 Msa0521270:three_prime_UTR
GTACAGGTATACATACACTG+GGG 0.875797 3_4:-73942553 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTTTATTTATACATAATA+AGG - chr3_4:73939439-73939458 None:intergenic 10.0%
!! AAAGATTATTCTAAATTATT+TGG + chr3_4:73939453-73939472 Msa0521270:intron 10.0%
!!! TTTGGTATTTTTTAAATTAG+TGG + chr3_4:73936103-73936122 Msa0521270:intron 15.0%
!! TTACATTTAGAAATAAATGT+GGG - chr3_4:73937242-73937261 None:intergenic 15.0%
!! TTTACATTTAGAAATAAATG+TGG - chr3_4:73937243-73937262 None:intergenic 15.0%
!! TCTATATAAAAGATAAACTT+AGG + chr3_4:73937559-73937578 Msa0521270:intron 15.0%
!! AACAACATACTATAAATAAA+TGG - chr3_4:73937622-73937641 None:intergenic 15.0%
!!! TTCATTTTTAACATCATTAA+AGG + chr3_4:73937665-73937684 Msa0521270:intron 15.0%
!! TTAATTACTTTATACAAACA+TGG + chr3_4:73938991-73939010 Msa0521270:CDS 15.0%
!! ATAAATATATCTATAATCTG+TGG + chr3_4:73940836-73940855 Msa0521270:intron 15.0%
!!! ATATTTAACTTTTCTCTTTT+GGG + chr3_4:73941146-73941165 Msa0521270:intron 15.0%
!!! TGACATATATTGTATTTTTT+GGG + chr3_4:73941548-73941567 Msa0521270:intron 15.0%
!! TAATCAAAATTTGCAATTGA+CGG - chr3_4:73935473-73935492 None:intergenic 20.0%
!!! GATTTCAATTTTGATTGATA+TGG + chr3_4:73935765-73935784 Msa0521270:intron 20.0%
!! CAAAATTAAAGGAGAAAAAA+GGG - chr3_4:73936552-73936571 None:intergenic 20.0%
!! ACAAAATTAAAGGAGAAAAA+AGG - chr3_4:73936553-73936572 None:intergenic 20.0%
!! ATATTTATCTTCAATCTTCA+TGG + chr3_4:73936575-73936594 Msa0521270:intron 20.0%
!! AATAATTACGAATAGAAGTT+TGG - chr3_4:73936810-73936829 None:intergenic 20.0%
!! ATTTCTAAATGTAAAAGAGA+TGG + chr3_4:73937248-73937267 Msa0521270:intron 20.0%
!! ATATAAAAGATAAACTTAGG+TGG + chr3_4:73937562-73937581 Msa0521270:intron 20.0%
!! AATGGTTAAAAACACTTAAA+TGG - chr3_4:73937946-73937965 None:intergenic 20.0%
!!! AATAAAATTAAATGGCTTTG+TGG - chr3_4:73937982-73938001 None:intergenic 20.0%
!!! TCATCCTACATAAATTTTAA+AGG - chr3_4:73938140-73938159 None:intergenic 20.0%
!! ACTTATACTTTGTCTATTAA+AGG + chr3_4:73938200-73938219 Msa0521270:intron 20.0%
!! CATTCTATTCATTAATCATA+AGG - chr3_4:73938475-73938494 None:intergenic 20.0%
!! CTTATGATTAATGAATAGAA+TGG + chr3_4:73938473-73938492 Msa0521270:intron 20.0%
!!! TCTCAATATTTTTTGTAATG+AGG + chr3_4:73939484-73939503 Msa0521270:intron 20.0%
!!! CTTGTATGTGATTTTTTTTT+TGG + chr3_4:73939817-73939836 Msa0521270:intron 20.0%
!! CTTGATTTAATCTAACTATA+AGG - chr3_4:73940692-73940711 None:intergenic 20.0%
!!! GATATTTAACTTTTCTCTTT+TGG + chr3_4:73941145-73941164 Msa0521270:intron 20.0%
!!! TATTTAACTTTTCTCTTTTG+GGG + chr3_4:73941147-73941166 Msa0521270:intron 20.0%
!!! GTGACATATATTGTATTTTT+TGG + chr3_4:73941547-73941566 Msa0521270:intron 20.0%
!! AAATTCAAAATAAGAAAGGA+AGG - chr3_4:73941600-73941619 None:intergenic 20.0%
!! CAACAAATTCAAAATAAGAA+AGG - chr3_4:73941604-73941623 None:intergenic 20.0%
!!! ATTTTGAATTTGTTGTGTTA+TGG + chr3_4:73941609-73941628 Msa0521270:intron 20.0%
!!! TTTTGAATTTGTTGTGTTAT+GGG + chr3_4:73941610-73941629 Msa0521270:intron 20.0%
!!! ATTAAGCTTAGATTTTCAAA+TGG + chr3_4:73941710-73941729 Msa0521270:intron 20.0%
!!! TTAAGCTTAGATTTTCAAAT+GGG + chr3_4:73941711-73941730 Msa0521270:intron 20.0%
!!! TTTGTTACATTTTCAATAGA+AGG - chr3_4:73942404-73942423 None:intergenic 20.0%
!!! TCACTCTATTTTTCTACAAT+TGG - chr3_4:73935518-73935537 None:intergenic 25.0%
!!! TTTGCTTTTAAACTTTTACG+CGG + chr3_4:73935883-73935902 Msa0521270:intron 25.0%
!!! ATTTTTAGTCATTCAGTACT+GGG + chr3_4:73936032-73936051 Msa0521270:intron 25.0%
! AAAATCTGTGAATTTACCTT+TGG - chr3_4:73936076-73936095 None:intergenic 25.0%
!! TCATATCTTTAAGAAAGCAA+CGG + chr3_4:73936238-73936257 Msa0521270:intron 25.0%
!! ATGTCAAAGTTTTTCATCTT+TGG - chr3_4:73936330-73936349 None:intergenic 25.0%
! AAATCTAAGCGTAGATAATA+AGG + chr3_4:73936385-73936404 Msa0521270:intron 25.0%
! ATCTCAAAAGAACAAAACAT+TGG + chr3_4:73936480-73936499 Msa0521270:intron 25.0%
! TTCAAATGATGTGTTTATCT+AGG - chr3_4:73936601-73936620 None:intergenic 25.0%
! ATTGCATTATAATACCTTCT+TGG + chr3_4:73936728-73936747 Msa0521270:CDS 25.0%
! TTGCATTATAATACCTTCTT+GGG + chr3_4:73936729-73936748 Msa0521270:CDS 25.0%
! TAGATACTACGGTTATTATT+AGG - chr3_4:73936950-73936969 None:intergenic 25.0%
! TAACTACTTTAACTATACAG+AGG + chr3_4:73937040-73937059 Msa0521270:intron 25.0%
!! TTTAACTATACAGAGGTATA+TGG + chr3_4:73937047-73937066 Msa0521270:intron 25.0%
! TAACACTGTGAACATAATAT+TGG - chr3_4:73937136-73937155 None:intergenic 25.0%
!!! TACTATAAATAAATGGACTG+TGG - chr3_4:73937615-73937634 None:intergenic 25.0%
!!! ATTTTCATGTATTTCTACTC+TGG + chr3_4:73937834-73937853 Msa0521270:intron 25.0%
! TGTGGTTGAAAATAAACTAA+TGG - chr3_4:73937964-73937983 None:intergenic 25.0%
!!! AATTTTAAAGGCAGTAGAAA+TGG - chr3_4:73938128-73938147 None:intergenic 25.0%
!!! ACTGCCTTTAAAATTTATGT+AGG + chr3_4:73938133-73938152 Msa0521270:intron 25.0%
! TAGTTTACCAAAATGGTATA+AGG - chr3_4:73938174-73938193 None:intergenic 25.0%
! TTAAAGGATTAAACCTTCTT+TGG + chr3_4:73938216-73938235 Msa0521270:intron 25.0%
!! AACTACATTGATACTGTTTT+TGG - chr3_4:73938335-73938354 None:intergenic 25.0%
! TAGTTTAGAAGTTTCAAAAC+AGG + chr3_4:73938350-73938369 Msa0521270:intron 25.0%
!! ACAGGAAATCTTTAGAAAAT+TGG + chr3_4:73938368-73938387 Msa0521270:intron 25.0%
! AGAAACCAATATTAACTTTG+AGG + chr3_4:73938409-73938428 Msa0521270:intron 25.0%
! TCAAGTATTTATTAGTTCCA+AGG + chr3_4:73938602-73938621 Msa0521270:intron 25.0%
! TTATCTATCTCTATCATACA+GGG - chr3_4:73938728-73938747 None:intergenic 25.0%
! TTTATCTATCTCTATCATAC+AGG - chr3_4:73938729-73938748 None:intergenic 25.0%
! AGTAATTAAATTCAAGCAAG+AGG - chr3_4:73938980-73938999 None:intergenic 25.0%
! TTACTAGCATGTTGAAAATT+AGG + chr3_4:73939037-73939056 Msa0521270:exon 25.0%
!! AAATCTAAAACAGAGATATG+AGG - chr3_4:73939078-73939097 None:intergenic 25.0%
! GGGAGATGTTAAATAATATT+TGG - chr3_4:73939124-73939143 None:intergenic 25.0%
! GAAAATTACAAGTTACTGAA+AGG - chr3_4:73939264-73939283 None:intergenic 25.0%
! TGAAAACAATTACAAGTTCT+AGG - chr3_4:73939299-73939318 None:intergenic 25.0%
! TATACATAATAAGGAGAACA+TGG - chr3_4:73939430-73939449 None:intergenic 25.0%
! ATGAGGTTCTTATTATTCTT+AGG + chr3_4:73939501-73939520 Msa0521270:intron 25.0%
! GTTCTTATTATTCTTAGGTA+AGG + chr3_4:73939506-73939525 Msa0521270:intron 25.0%
!! ACTAATATACATGAGTTGAA+TGG + chr3_4:73939651-73939670 Msa0521270:intron 25.0%
!! CTAATATACATGAGTTGAAT+GGG + chr3_4:73939652-73939671 Msa0521270:intron 25.0%
!! TATTTTACAAGCTTCTCTAT+TGG - chr3_4:73940180-73940199 None:intergenic 25.0%
! ATAGAGAAGCTTGTAAAATA+TGG + chr3_4:73940180-73940199 Msa0521270:three_prime_UTR 25.0%
!! TTGATTTTTATAGAAGTGAC+TGG + chr3_4:73940899-73940918 Msa0521270:intron 25.0%
! AACTACCAAGCAAAAAAATA+AGG + chr3_4:73940958-73940977 Msa0521270:three_prime_UTR 25.0%
! AAAGATTTACTCAAATGCAA+TGG + chr3_4:73941014-73941033 Msa0521270:three_prime_UTR 25.0%
! AAGATTTACTCAAATGCAAT+GGG + chr3_4:73941015-73941034 Msa0521270:three_prime_UTR 25.0%
! GATGAAACTTAAATCTGAAT+CGG + chr3_4:73941075-73941094 Msa0521270:three_prime_UTR 25.0%
!!! CTTATCGTTGATTTCAAAAA+TGG + chr3_4:73941171-73941190 Msa0521270:intron 25.0%
!! GAAATTTTGTCAAAACAGTA+TGG + chr3_4:73941314-73941333 Msa0521270:three_prime_UTR 25.0%
!! TATTAAAGTTCTGGTTAAAG+AGG + chr3_4:73941364-73941383 Msa0521270:three_prime_UTR 25.0%
!! ATTTTGTATTATCTGTCAAG+AGG - chr3_4:73941502-73941521 None:intergenic 25.0%
!!! ATATTGTATTTTTTGGGTTC+TGG + chr3_4:73941554-73941573 Msa0521270:intron 25.0%
! TTGATTGAAGTTCAGAAATA+AGG - chr3_4:73941753-73941772 None:intergenic 25.0%
!!! TACAAGTTATCATTTTTCTG+TGG + chr3_4:73942055-73942074 Msa0521270:intron 25.0%
! CAAGTTCTGTAAATATAGAA+GGG - chr3_4:73942165-73942184 None:intergenic 25.0%
! ACAAGTTCTGTAAATATAGA+AGG - chr3_4:73942166-73942185 None:intergenic 25.0%
!! GAACTTGTTTAAATTTGTTC+AGG + chr3_4:73942178-73942197 Msa0521270:intron 25.0%
! AAAACCAATGACATAAAAGA+TGG + chr3_4:73942248-73942267 Msa0521270:three_prime_UTR 25.0%
! TGCAAAATAATTATTCGTAC+AGG - chr3_4:73942572-73942591 None:intergenic 25.0%
!!! ATCGATGTTTTTTGAAGTTG+AGG + chr3_4:73935911-73935930 Msa0521270:intron 30.0%
!!! TGTTTTTTGAAGTTGAGGAT+TGG + chr3_4:73935916-73935935 Msa0521270:intron 30.0%
!!! GATTTTTAGTCATTCAGTAC+TGG + chr3_4:73936031-73936050 Msa0521270:intron 30.0%
!! TCACAGATTTTTAACTCGTT+TGG + chr3_4:73936085-73936104 Msa0521270:intron 30.0%
TTAGTGGAAAATGAAGTTTG+AGG + chr3_4:73936119-73936138 Msa0521270:intron 30.0%
! TAACTTTCACTGTTTTCACT+GGG - chr3_4:73936297-73936316 None:intergenic 30.0%
! ATAACTTTCACTGTTTTCAC+TGG - chr3_4:73936298-73936317 None:intergenic 30.0%
TCATCAAAGCTAACTAAGAA+GGG - chr3_4:73936447-73936466 None:intergenic 30.0%
!! TTCTTAGTTAGCTTTGATGA+CGG + chr3_4:73936447-73936466 Msa0521270:intron 30.0%
TATAATGCAATAACTCCAAC+CGG - chr3_4:73936719-73936738 None:intergenic 30.0%
!! GGATCTGAATTCTTTGATTT+TGG - chr3_4:73936763-73936782 None:intergenic 30.0%
AAAGAATTCAGATCCTATAG+TGG + chr3_4:73936768-73936787 Msa0521270:CDS 30.0%
TTGATCAACTTTACCACTAT+AGG - chr3_4:73936784-73936803 None:intergenic 30.0%
!! TGTAATTATCACCACTTTTC+AGG + chr3_4:73936835-73936854 Msa0521270:intron 30.0%
AGAGAGCAAAAATAACTCTA+CGG - chr3_4:73936999-73937018 None:intergenic 30.0%
!! TTCTGCATCATTTGTTGTTA+TGG + chr3_4:73937168-73937187 Msa0521270:intron 30.0%
AAAAAGAATAAAGCCAACCA+GGG - chr3_4:73937207-73937226 None:intergenic 30.0%
AAAAAAGAATAAAGCCAACC+AGG - chr3_4:73937208-73937227 None:intergenic 30.0%
!! AAAGAGATGGTTTTACCAAA+TGG + chr3_4:73937261-73937280 Msa0521270:intron 30.0%
!! TAGTTGTTTCTTTCTGTCAT+TGG + chr3_4:73937371-73937390 Msa0521270:intron 30.0%
CTTAGGCATTAATGATTTAC+AGG + chr3_4:73937585-73937604 Msa0521270:intron 30.0%
CCAAAATGGTATAAGGATAA+GGG - chr3_4:73938167-73938186 None:intergenic 30.0%
ACCAAAATGGTATAAGGATA+AGG - chr3_4:73938168-73938187 None:intergenic 30.0%
TGCTTCATAGTTTACCAAAA+TGG - chr3_4:73938181-73938200 None:intergenic 30.0%
AATGAGAACTCAGAGAATAA+TGG + chr3_4:73938285-73938304 Msa0521270:intron 30.0%
!! ATATTGGTTTCTTTCAGATC+TGG - chr3_4:73938401-73938420 None:intergenic 30.0%
! AACCAATATTAACTTTGAGG+CGG + chr3_4:73938412-73938431 Msa0521270:intron 30.0%
!!! TTTTGAAGCAATGCTAGATA+TGG + chr3_4:73938539-73938558 Msa0521270:intron 30.0%
! TTTGAAGCAATGCTAGATAT+GGG + chr3_4:73938540-73938559 Msa0521270:intron 30.0%
! GACTAATATTGTTTTCTCCT+TGG - chr3_4:73938622-73938641 None:intergenic 30.0%
TGGCAAAATAGTCAACTAAT+CGG - chr3_4:73938786-73938805 None:intergenic 30.0%
AGCTTAAAAAGGAATTTCCA+AGG + chr3_4:73938820-73938839 Msa0521270:intron 30.0%
AATACCAATTGTTGCATGTT+TGG + chr3_4:73938934-73938953 Msa0521270:CDS 30.0%
ATACCAATTGTTGCATGTTT+GGG + chr3_4:73938935-73938954 Msa0521270:CDS 30.0%
ATCTTGTGGTTAGGTTAAAA+AGG - chr3_4:73939361-73939380 None:intergenic 30.0%
ACTCATGTATATTAGTGTAC+AGG - chr3_4:73939647-73939666 None:intergenic 30.0%
ATCAATGTCAGACAATAGTT+TGG - chr3_4:73939742-73939761 None:intergenic 30.0%
TGATATATCAAGATGTGCAT+CGG + chr3_4:73939758-73939777 Msa0521270:three_prime_UTR 30.0%
! TTCCAATAACACGGATTATT+CGG + chr3_4:73939978-73939997 Msa0521270:three_prime_UTR 30.0%
TGGCATATCAAATATTGATG+AGG + chr3_4:73940200-73940219 Msa0521270:three_prime_UTR 30.0%
GGCATATCAAATATTGATGA+GGG + chr3_4:73940201-73940220 Msa0521270:three_prime_UTR 30.0%
! TATTGATGAGGGTTTGTTTA+TGG + chr3_4:73940212-73940231 Msa0521270:three_prime_UTR 30.0%
! ATTGATGAGGGTTTGTTTAT+GGG + chr3_4:73940213-73940232 Msa0521270:three_prime_UTR 30.0%
!! ACTATTCTAGAGCAATTAGA+AGG + chr3_4:73940240-73940259 Msa0521270:three_prime_UTR 30.0%
TCATATGATTCTTCACTTCT+AGG + chr3_4:73940333-73940352 Msa0521270:three_prime_UTR 30.0%
ACTTCTAGGTAATAATACCA+TGG + chr3_4:73940347-73940366 Msa0521270:three_prime_UTR 30.0%
! AAGCTTTCAAATGAAAGTGT+TGG + chr3_4:73940417-73940436 Msa0521270:three_prime_UTR 30.0%
! GTAGTGACATGTCTAATTTT+GGG + chr3_4:73940463-73940482 Msa0521270:three_prime_UTR 30.0%
TTCAAGAGAAACAGATATTG+TGG + chr3_4:73940539-73940558 Msa0521270:three_prime_UTR 30.0%
TCAAGAGAAACAGATATTGT+GGG + chr3_4:73940540-73940559 Msa0521270:three_prime_UTR 30.0%
! CAGAACTTTTCAATTTTGTG+TGG - chr3_4:73940566-73940585 None:intergenic 30.0%
CACACAAAATTGAAAAGTTC+TGG + chr3_4:73940564-73940583 Msa0521270:three_prime_UTR 30.0%
AAATCAAGAAATAGCTGCAA+AGG + chr3_4:73940704-73940723 Msa0521270:three_prime_UTR 30.0%
! AAAGGATTTTCTTACGACAA+AGG + chr3_4:73940722-73940741 Msa0521270:three_prime_UTR 30.0%
! AGTTTTCTTGTACCTGAAAT+TGG + chr3_4:73940795-73940814 Msa0521270:intron 30.0%
TTTATTTATTCAGTAGCCTC+TGG - chr3_4:73940821-73940840 None:intergenic 30.0%
!!! GTTCTCCTTATTTTTTTGCT+TGG - chr3_4:73940966-73940985 None:intergenic 30.0%
ACTGTTATACATATGATACC+AGG + chr3_4:73941199-73941218 Msa0521270:intron 30.0%
TTATACATATGATACCAGGA+TGG + chr3_4:73941203-73941222 Msa0521270:intron 30.0%
TTCCTTCTTCAATTCTGTTT+GGG - chr3_4:73941408-73941427 None:intergenic 30.0%
!! ACATACAGAAAAGCTTTGAA+AGG - chr3_4:73941653-73941672 None:intergenic 30.0%
! TCTCTTTGTGAAGTGTTATA+TGG + chr3_4:73941681-73941700 Msa0521270:intron 30.0%
! TTTGTGAAGTGTTATATGGA+AGG + chr3_4:73941685-73941704 Msa0521270:intron 30.0%
ACATATAAGTCATGCATTCA+GGG - chr3_4:73941783-73941802 None:intergenic 30.0%
AACATATAAGTCATGCATTC+AGG - chr3_4:73941784-73941803 None:intergenic 30.0%
! TACACCATCTTTTATGTCAT+TGG - chr3_4:73942255-73942274 None:intergenic 30.0%
ATAAAAGATGGTGTAATCTG+TGG + chr3_4:73942260-73942279 Msa0521270:three_prime_UTR 30.0%
! GATCATATCAGATTTGTTCT+TGG + chr3_4:73942298-73942317 Msa0521270:three_prime_UTR 30.0%
TGTAAAATTAACTCGCCTAT+AGG - chr3_4:73942518-73942537 None:intergenic 30.0%
ACTGGAATGGAAACAAATCA+TGG - chr3_4:73935946-73935965 None:intergenic 35.0%
TATCTACCACAAAGCAAATC+AGG - chr3_4:73935978-73935997 None:intergenic 35.0%
ATTACAGAGAAACACTGCAA+GGG - chr3_4:73936008-73936027 None:intergenic 35.0%
TATTACAGAGAAACACTGCA+AGG - chr3_4:73936009-73936028 None:intergenic 35.0%
TGTGAATTTACCTTTGGACT+GGG - chr3_4:73936070-73936089 None:intergenic 35.0%
!! AAGCAACGGCATTTTGATAA+TGG + chr3_4:73936252-73936271 Msa0521270:intron 35.0%
TAGATAATAAGGCTTCACAC+AGG + chr3_4:73936396-73936415 Msa0521270:intron 35.0%
! ACACAGGCATTTGCTTTAAA+GGG + chr3_4:73936412-73936431 Msa0521270:intron 35.0%
ATCAAAGCTAACTAAGAAGG+GGG - chr3_4:73936445-73936464 None:intergenic 35.0%
CATCAAAGCTAACTAAGAAG+GGG - chr3_4:73936446-73936465 None:intergenic 35.0%
GTCATCAAAGCTAACTAAGA+AGG - chr3_4:73936448-73936467 None:intergenic 35.0%
AAGGGAGGATAAATAAGCTT+AGG - chr3_4:73936646-73936665 None:intergenic 35.0%
CCATTCTGTGTAATTGGAAA+GGG - chr3_4:73936664-73936683 None:intergenic 35.0%
CCTTTCCAATTACACAGAAT+GGG + chr3_4:73936662-73936681 Msa0521270:CDS 35.0%
!!! TTATCACCACTTTTCAGGTT+TGG + chr3_4:73936840-73936859 Msa0521270:intron 35.0%
!!! TATCACCACTTTTCAGGTTT+GGG + chr3_4:73936841-73936860 Msa0521270:intron 35.0%
!!! TTTTCAGGTTTGGGTTTGTT+AGG + chr3_4:73936850-73936869 Msa0521270:intron 35.0%
TCAGCAGCATATAGATACTA+CGG - chr3_4:73936961-73936980 None:intergenic 35.0%
ACGACAAGACTTTCCTATAA+AGG + chr3_4:73937084-73937103 Msa0521270:intron 35.0%
CAATGAAAAATATGCCTGCA+GGG - chr3_4:73937110-73937129 None:intergenic 35.0%
ACAATGAAAAATATGCCTGC+AGG - chr3_4:73937111-73937130 None:intergenic 35.0%
GACTGGAATAGAGTATAATG+TGG - chr3_4:73937338-73937357 None:intergenic 35.0%
CGAACACTGTATATAGCATT+TGG - chr3_4:73937438-73937457 None:intergenic 35.0%
ATACAGTGTTCGATAGTTAC+AGG + chr3_4:73937446-73937465 Msa0521270:intron 35.0%
AAGATAAACTTAGGTGGCTT+AGG + chr3_4:73937568-73937587 Msa0521270:intron 35.0%
TCATTAAAGGACAGTTCTAC+AGG + chr3_4:73937678-73937697 Msa0521270:intron 35.0%
TTGGTATACAATCACCAGAA+GGG + chr3_4:73937708-73937727 Msa0521270:CDS 35.0%
TGGATATTTGTAATCCCTTC+TGG - chr3_4:73937725-73937744 None:intergenic 35.0%
GAAGGGATTACAAATATCCA+TGG + chr3_4:73937725-73937744 Msa0521270:CDS 35.0%
! ATATCCATGGAGTACTAAGA+AGG + chr3_4:73937738-73937757 Msa0521270:CDS 35.0%
GTAGTCAGAAATCAGAATCA+CGG - chr3_4:73937860-73937879 None:intergenic 35.0%
! TTCACATTCTGAGAGAGTAT+CGG - chr3_4:73938069-73938088 None:intergenic 35.0%
CAGAATGTGAAGACAAATCA+TGG + chr3_4:73938078-73938097 Msa0521270:intron 35.0%
AATGTGAAGACAAATCATGG+TGG + chr3_4:73938081-73938100 Msa0521270:intron 35.0%
! CCCTTATCCTTATACCATTT+TGG + chr3_4:73938164-73938183 Msa0521270:intron 35.0%
! GTTTCTTTCAGATCTGGTTT+AGG - chr3_4:73938395-73938414 None:intergenic 35.0%
TTCCGCCTCAAAGTTAATAT+TGG - chr3_4:73938417-73938436 None:intergenic 35.0%
AGCATTGCTTCAAAAAATGC+CGG - chr3_4:73938534-73938553 None:intergenic 35.0%
! TTATATTTTCTCGCAGCAGA+AGG - chr3_4:73938576-73938595 None:intergenic 35.0%
GCTGTCTATGTAGCTTAAAA+AGG + chr3_4:73938809-73938828 Msa0521270:intron 35.0%
AATCCCAAACATGCAACAAT+TGG - chr3_4:73938941-73938960 None:intergenic 35.0%
! TTGTTGCATGTTTGGGATTA+TGG + chr3_4:73938942-73938961 Msa0521270:CDS 35.0%
AACCAGAGAAAGTTACTGAA+AGG - chr3_4:73939328-73939347 None:intergenic 35.0%
! ACAAGATCCACCATGTTTTT+GGG + chr3_4:73939374-73939393 Msa0521270:intron 35.0%
TTTCAATGTCCCCAAAAACA+TGG - chr3_4:73939387-73939406 None:intergenic 35.0%
! ATTTTGTACAACGTGACAAG+TGG + chr3_4:73939590-73939609 Msa0521270:intron 35.0%
AATCTGACTGTGATGTTAGA+CGG - chr3_4:73939618-73939637 None:intergenic 35.0%
CATGTATATTAGTGTACAGG+TGG - chr3_4:73939644-73939663 None:intergenic 35.0%
! ATATACATGAGTTGAATGGG+TGG + chr3_4:73939655-73939674 Msa0521270:intron 35.0%
!! GTTTACTTTTGCTACAGAGA+AGG + chr3_4:73939694-73939713 Msa0521270:intron 35.0%
! TAATCCGTGTTATTGGAATC+AGG - chr3_4:73939976-73939995 None:intergenic 35.0%
TTATCATCCTGTCCAATTCT+TGG - chr3_4:73940108-73940127 None:intergenic 35.0%
!! CAGGATGATAATTCTGAAGT+TGG + chr3_4:73940117-73940136 Msa0521270:three_prime_UTR 35.0%
!! AATGAAAGTGTTGGAAGTGA+TGG + chr3_4:73940426-73940445 Msa0521270:three_prime_UTR 35.0%
! GGTAGTGACATGTCTAATTT+TGG + chr3_4:73940462-73940481 Msa0521270:three_prime_UTR 35.0%
! TTTGGGATTCCAAATTCATC+TGG + chr3_4:73940480-73940499 Msa0521270:three_prime_UTR 35.0%
ATTCCAAATTCATCTGGTGA+TGG + chr3_4:73940486-73940505 Msa0521270:three_prime_UTR 35.0%
! AGTTTATTGCGTTGATCTAG+CGG - chr3_4:73940609-73940628 None:intergenic 35.0%
ATCAACGCAATAAACTGAAC+AGG + chr3_4:73940613-73940632 Msa0521270:three_prime_UTR 35.0%
AGTCACTGCAAAAACTGATA+TGG + chr3_4:73940662-73940681 Msa0521270:three_prime_UTR 35.0%
GTTGTGGAACATAAAGAATC+TGG - chr3_4:73940865-73940884 None:intergenic 35.0%
! AAAGCTTTGTATGCAAGTTG+TGG - chr3_4:73940881-73940900 None:intergenic 35.0%
TACTCAAATGCAATGGGATA+TGG + chr3_4:73941021-73941040 Msa0521270:three_prime_UTR 35.0%
TGTTGGTCAGAATTTGACAA+AGG + chr3_4:73941229-73941248 Msa0521270:three_prime_UTR 35.0%
CAGAACTTTAATATCTCCCT+TGG - chr3_4:73941357-73941376 None:intergenic 35.0%
CAAGGGAGATATTAAAGTTC+TGG + chr3_4:73941355-73941374 Msa0521270:three_prime_UTR 35.0%
TCAATTCTGTTTGGGAACTA+CGG - chr3_4:73941400-73941419 None:intergenic 35.0%
TTCCCAAACAGAATTGAAGA+AGG + chr3_4:73941403-73941422 Msa0521270:three_prime_UTR 35.0%
GTTCCTTCTTCAATTCTGTT+TGG - chr3_4:73941409-73941428 None:intergenic 35.0%
AGCTTCACATTTCTCCTTTA+TGG - chr3_4:73941441-73941460 None:intergenic 35.0%
!! CAGAAAAGCTTTGAAAGGAA+GGG - chr3_4:73941648-73941667 None:intergenic 35.0%
!! ACAGAAAAGCTTTGAAAGGA+AGG - chr3_4:73941649-73941668 None:intergenic 35.0%
ATACACGAGAAACACAAACA+TGG - chr3_4:73941811-73941830 None:intergenic 35.0%
TGAAAGAGAAAAGAGTGAAC+AGG + chr3_4:73941849-73941868 Msa0521270:three_prime_UTR 35.0%
AGAAAACAGCTTGAGAAATG+TGG + chr3_4:73941886-73941905 Msa0521270:three_prime_UTR 35.0%
GAAAACAGCTTGAGAAATGT+GGG + chr3_4:73941887-73941906 Msa0521270:three_prime_UTR 35.0%
TGTACACGTGGCTTCTTTAA+TGG - chr3_4:73935302-73935321 None:intergenic 40.0%
AAATTTGCAATTGACGGCAC+CGG - chr3_4:73935467-73935486 None:intergenic 40.0%
! ACAACGATTACCCATTTTCG+AGG - chr3_4:73935640-73935659 None:intergenic 40.0%
! GCTTTTAAACTTTTACGCGG+TGG + chr3_4:73935886-73935905 Msa0521270:intron 40.0%
CAAATCAGGACTCAGAAAAC+TGG - chr3_4:73935964-73935983 None:intergenic 40.0%
CTGTGAATTTACCTTTGGAC+TGG - chr3_4:73936071-73936090 None:intergenic 40.0%
!! TTGCAATTTGCTTTGGAACG+CGG - chr3_4:73936192-73936211 None:intergenic 40.0%
! GCTTGGATTGCAATTTGCTT+TGG - chr3_4:73936199-73936218 None:intergenic 40.0%
ATATGATTCAACCTCGACCA+TGG - chr3_4:73936224-73936243 None:intergenic 40.0%
CACACAGGCATTTGCTTTAA+AGG + chr3_4:73936411-73936430 Msa0521270:intron 40.0%
TTCTGTGTAATTGGAAAGGG+AGG - chr3_4:73936661-73936680 None:intergenic 40.0%
CCCTTTCCAATTACACAGAA+TGG + chr3_4:73936661-73936680 Msa0521270:CDS 40.0%
CCCATTCTGTGTAATTGGAA+AGG - chr3_4:73936665-73936684 None:intergenic 40.0%
TTCCAATTACACAGAATGGG+CGG + chr3_4:73936665-73936684 Msa0521270:CDS 40.0%
ACAAACCCAAACCTGAAAAG+TGG - chr3_4:73936849-73936868 None:intergenic 40.0%
ATGGTTGTGTTATGAATCCC+TGG + chr3_4:73937187-73937206 Msa0521270:intron 40.0%
TTGTGTTATGAATCCCTGGT+TGG + chr3_4:73937191-73937210 Msa0521270:intron 40.0%
ACTACTAGAAGCAGATTGAC+TGG - chr3_4:73937355-73937374 None:intergenic 40.0%
GTAAAGTCAAGTGTCAAACC+AGG + chr3_4:73937507-73937526 Msa0521270:intron 40.0%
! TTTTTCACAGACATGTCTCC+TGG - chr3_4:73937528-73937547 None:intergenic 40.0%
GTTGGTATACAATCACCAGA+AGG + chr3_4:73937707-73937726 Msa0521270:CDS 40.0%
TGAACCTTCTTAGTACTCCA+TGG - chr3_4:73937745-73937764 None:intergenic 40.0%
! CAAATCATGGTGGAGTCAAT+TGG + chr3_4:73938091-73938110 Msa0521270:intron 40.0%
! ACATGCAGATTAGCCAAAGA+AGG - chr3_4:73938232-73938251 None:intergenic 40.0%
! TTTGAGGCGGAAAATAGACA+AGG + chr3_4:73938425-73938444 Msa0521270:intron 40.0%
TGTTGTGCACATGTGTTATG+AGG - chr3_4:73938499-73938518 None:intergenic 40.0%
ACATGTGCACAACAACATGA+GGG + chr3_4:73938505-73938524 Msa0521270:intron 40.0%
GCATATGTCTGTGCTTGTTT+AGG + chr3_4:73938755-73938774 Msa0521270:intron 40.0%
TAAGCTACATAGACAGCATG+TGG - chr3_4:73938806-73938825 None:intergenic 40.0%
! ATTGAAAAGCCGAGCTTTGT+TGG + chr3_4:73938881-73938900 Msa0521270:CDS 40.0%
GTAACCAATTCCATCTTGAC+TGG - chr3_4:73939152-73939171 None:intergenic 40.0%
! GTAAAAGCACAAGCACAAGA+AGG - chr3_4:73939223-73939242 None:intergenic 40.0%
AGCCTTTCAGTAACTTTCTC+TGG + chr3_4:73939323-73939342 Msa0521270:intron 40.0%
!! CAAAAACATGGTGGATCTTG+TGG - chr3_4:73939375-73939394 None:intergenic 40.0%
! CACAAGATCCACCATGTTTT+TGG + chr3_4:73939373-73939392 Msa0521270:intron 40.0%
!! CAAGATCCACCATGTTTTTG+GGG + chr3_4:73939375-73939394 Msa0521270:intron 40.0%
TATATCAAGATGTGCATCGG+TGG + chr3_4:73939761-73939780 Msa0521270:three_prime_UTR 40.0%
GATCGTTTACTGAATTCTGC+TGG - chr3_4:73939954-73939973 None:intergenic 40.0%
CGATCCTGATTCCAATAACA+CGG + chr3_4:73939969-73939988 Msa0521270:three_prime_UTR 40.0%
CACCGAATAATCCGTGTTAT+TGG - chr3_4:73939983-73940002 None:intergenic 40.0%
TCATCTGTTGCGTCAGATTA+TGG + chr3_4:73940045-73940064 Msa0521270:three_prime_UTR 40.0%
TGATACTCCATACGATGCAT+CGG + chr3_4:73940071-73940090 Msa0521270:three_prime_UTR 40.0%
GAAGTAGGAACTCCAAGAAT+TGG + chr3_4:73940093-73940112 Msa0521270:three_prime_UTR 40.0%
AGCAATTAGAAGGACTTCCT+AGG + chr3_4:73940250-73940269 Msa0521270:three_prime_UTR 40.0%
CTGGCATTTACTTTATGCCT+AGG - chr3_4:73940270-73940289 None:intergenic 40.0%
CACTGCAAAAACTGATATGG+AGG + chr3_4:73940665-73940684 Msa0521270:three_prime_UTR 40.0%
AAGGTATACCATATGCGACT+TGG + chr3_4:73940741-73940760 Msa0521270:intron 40.0%
ATCTGTTCAGGTCAAGGATT+TGG + chr3_4:73940922-73940941 Msa0521270:intron 40.0%
AAATAAGGAGAACTTGCAGC+AGG + chr3_4:73940973-73940992 Msa0521270:three_prime_UTR 40.0%
TCAAATGCAATGGGATATGG+AGG + chr3_4:73941024-73941043 Msa0521270:three_prime_UTR 40.0%
TGATACCAGGATGGAAATGT+TGG + chr3_4:73941212-73941231 Msa0521270:intron 40.0%
AGAGCTAGAAGCAAAATCCA+AGG + chr3_4:73941337-73941356 Msa0521270:three_prime_UTR 40.0%
GAGCTAGAAGCAAAATCCAA+GGG + chr3_4:73941338-73941357 Msa0521270:three_prime_UTR 40.0%
GGAACTTAGTGAGTCCATAA+AGG + chr3_4:73941424-73941443 Msa0521270:three_prime_UTR 40.0%
AAAGGAGAAATGTGAAGCTG+AGG + chr3_4:73941442-73941461 Msa0521270:three_prime_UTR 40.0%
AGTTCAGAAATAAGGCAGTG+AGG - chr3_4:73941745-73941764 None:intergenic 40.0%
TGATCTTCCTTACGAAGATG+AGG + chr3_4:73941942-73941961 Msa0521270:three_prime_UTR 40.0%
CTGCTAGTAGGATGTCAATT+TGG - chr3_4:73942032-73942051 None:intergenic 40.0%
AATTGACATCCTACTAGCAG+AGG + chr3_4:73942032-73942051 Msa0521270:three_prime_UTR 40.0%
! TAACTTGTACCTCTGCTAGT+AGG - chr3_4:73942044-73942063 None:intergenic 40.0%
TCAGGTAGAAAACCTAGAGA+AGG + chr3_4:73942196-73942215 Msa0521270:intron 40.0%
TACATTAGAAGCTGCACTTC+CGG - chr3_4:73942225-73942244 None:intergenic 40.0%
AACAGACAAACCGTGTTACA+AGG + chr3_4:73942339-73942358 Msa0521270:three_prime_UTR 40.0%
TACAAGGCATGCTCTCAAAT+TGG + chr3_4:73942355-73942374 Msa0521270:three_prime_UTR 40.0%
GATGAAAAACAGTGGAGTCA+AGG - chr3_4:73942478-73942497 None:intergenic 40.0%
!! TCCACTGTTTTTCATCCTAG+CGG + chr3_4:73942482-73942501 Msa0521270:three_prime_UTR 40.0%
GTACAGGTATACATACACTG+GGG - chr3_4:73942556-73942575 None:intergenic 40.0%
CGTACAGGTATACATACACT+GGG - chr3_4:73942557-73942576 None:intergenic 40.0%
TCGTACAGGTATACATACAC+TGG - chr3_4:73942558-73942577 None:intergenic 40.0%
GTTTCGTGTGTTTGTACACG+TGG - chr3_4:73935314-73935333 None:intergenic 45.0%
TAAGAGTTGAAGCGGTAACG+TGG - chr3_4:73935364-73935383 None:intergenic 45.0%
GATGAAGGAGGAATCTATGC+CGG - chr3_4:73935416-73935435 None:intergenic 45.0%
AAAGCTAGGGTTTCTCCGAT+CGG - chr3_4:73935442-73935461 None:intergenic 45.0%
!! GGAGAAACCCTAGCTTTTTC+CGG + chr3_4:73935445-73935464 Msa0521270:five_prime_UTR 45.0%
CTCCAAAGCATAGACACGAT+GGG + chr3_4:73935575-73935594 Msa0521270:CDS 45.0%
!! ATTACCCATTTTCGAGGTGC+AGG - chr3_4:73935634-73935653 None:intergenic 45.0%
CAGGACTCAGAAAACTGGAA+TGG - chr3_4:73935959-73935978 None:intergenic 45.0%
!! CTGAGTCCTGATTTGCTTTG+TGG + chr3_4:73935969-73935988 Msa0521270:intron 45.0%
! CATTCAGTACTGGGCATGTT+AGG + chr3_4:73936041-73936060 Msa0521270:CDS 45.0%
AATTGCAATCCAAGCGACCA+TGG + chr3_4:73936204-73936223 Msa0521270:intron 45.0%
TCCAATTACACAGAATGGGC+GGG + chr3_4:73936666-73936685 Msa0521270:CDS 45.0%
ACGATGATTGTGTGGCCATT+CGG - chr3_4:73936695-73936714 None:intergenic 45.0%
! ACTTTTGTAGCACCGTCTTG+TGG + chr3_4:73937301-73937320 Msa0521270:intron 45.0%
! CTTTTGTAGCACCGTCTTGT+GGG + chr3_4:73937302-73937321 Msa0521270:intron 45.0%
! TTTTGTAGCACCGTCTTGTG+GGG + chr3_4:73937303-73937322 Msa0521270:intron 45.0%
CAGTTCTACAGGCTTCAAGT+TGG + chr3_4:73937689-73937708 Msa0521270:intron 45.0%
CACATGTGCACAACAACATG+AGG + chr3_4:73938504-73938523 Msa0521270:intron 45.0%
TTCAATCGCATGAGTCCCTT+GGG - chr3_4:73938867-73938886 None:intergenic 45.0%
TTTCAATCGCATGAGTCCCT+TGG - chr3_4:73938868-73938887 None:intergenic 45.0%
CAACCTCTTCCAACAAAGCT+CGG - chr3_4:73938893-73938912 None:intergenic 45.0%
!! GAGCTTTGTTGGAAGAGGTT+GGG + chr3_4:73938892-73938911 Msa0521270:CDS 45.0%
ATTCCATCTTGACTGGACAG+CGG - chr3_4:73939145-73939164 None:intergenic 45.0%
CTGTCCAGTCAAGATGGAAT+TGG + chr3_4:73939145-73939164 Msa0521270:intron 45.0%
!! ACATGGTGGATCTTGTGGTT+AGG - chr3_4:73939370-73939389 None:intergenic 45.0%
CAATGTCCCCAAAAACATGG+TGG - chr3_4:73939384-73939403 None:intergenic 45.0%
GGGGACATTGAAAATGTAGC+TGG + chr3_4:73939394-73939413 Msa0521270:intron 45.0%
TGCTGGCATGTGATTACATG+AGG - chr3_4:73939917-73939936 None:intergenic 45.0%
! TGGCTTGCATCTTGAAATGC+TGG - chr3_4:73939934-73939953 None:intergenic 45.0%
GGTGCAATCATCTCTCCATT+CGG + chr3_4:73939999-73940018 Msa0521270:three_prime_UTR 45.0%
GTGCAATCATCTCTCCATTC+GGG + chr3_4:73940000-73940019 Msa0521270:three_prime_UTR 45.0%
CAGCTAATGATAAGCCCGAA+TGG - chr3_4:73940017-73940036 None:intergenic 45.0%
AGGAACTCCAAGAATTGGAC+AGG + chr3_4:73940098-73940117 Msa0521270:three_prime_UTR 45.0%
TGTGAACAATGTTACGGGGA+AGG + chr3_4:73940293-73940312 Msa0521270:three_prime_UTR 45.0%
! CCTGGGCATGCTAAAGTTTT+GGG + chr3_4:73940384-73940403 Msa0521270:three_prime_UTR 45.0%
! AGTGATGGAAGCTCAATACG+AGG + chr3_4:73940441-73940460 Msa0521270:three_prime_UTR 45.0%
GAGCCATCACCAGATGAATT+TGG - chr3_4:73940492-73940511 None:intergenic 45.0%
! TATTGCGTTGATCTAGCGGA+AGG - chr3_4:73940605-73940624 None:intergenic 45.0%
TTCTTTCGACCATGCAGAGA+AGG + chr3_4:73940637-73940656 Msa0521270:three_prime_UTR 45.0%
TTGTACCTGAAATTGGCCAG+AGG + chr3_4:73940802-73940821 Msa0521270:intron 45.0%
AGAAGTGACTGGATCTGTTC+AGG + chr3_4:73940910-73940929 Msa0521270:intron 45.0%
AGCAGGCTATTCTGATTGAG+AGG + chr3_4:73940990-73941009 Msa0521270:three_prime_UTR 45.0%
GCAGGCTATTCTGATTGAGA+GGG + chr3_4:73940991-73941010 Msa0521270:three_prime_UTR 45.0%
GGGATATGGAGGAACTTAGA+CGG + chr3_4:73941035-73941054 Msa0521270:three_prime_UTR 45.0%
TAGACGGAAGTCACTGGAAA+TGG + chr3_4:73941051-73941070 Msa0521270:three_prime_UTR 45.0%
TCTGACCAACATTTCCATCC+TGG - chr3_4:73941220-73941239 None:intergenic 45.0%
GAGAAATGTGAAGCTGAGGT+AGG + chr3_4:73941446-73941465 Msa0521270:intron 45.0%
TTCCTTACGAAGATGAGGAC+AGG + chr3_4:73941947-73941966 Msa0521270:three_prime_UTR 45.0%
GAAAACCTAGAGAAGGACAC+CGG + chr3_4:73942203-73942222 Msa0521270:three_prime_UTR 45.0%
! TGAGAGCATGCCTTGTAACA+CGG - chr3_4:73942352-73942371 None:intergenic 45.0%
AGTGGAGTCAAGGTCAAAAG+TGG - chr3_4:73942468-73942487 None:intergenic 45.0%
TCCGCTAGGATGAAAAACAG+TGG - chr3_4:73942486-73942505 None:intergenic 45.0%
ATAGGATTCTCTCATCCGCT+AGG - chr3_4:73942500-73942519 None:intergenic 45.0%
AGCGGATGAGAGAATCCTAT+AGG + chr3_4:73942500-73942519 Msa0521270:three_prime_UTR 45.0%
!! ATAAATATATACAAAATTAA+AGG - chr3_4:73936563-73936582 None:intergenic 5.0%
!! AAATTAACAATAAAATTAAA+TGG - chr3_4:73937990-73938009 None:intergenic 5.0%
GCGTAAGCACAGTGGAAGAA+TGG - chr3_4:73935394-73935413 None:intergenic 50.0%
TTCTTCCACTGTGCTTACGC+CGG + chr3_4:73935394-73935413 Msa0521270:five_prime_UTR 50.0%
TCCTCCTTCATCGATCCGAT+CGG + chr3_4:73935424-73935443 Msa0521270:five_prime_UTR 50.0%
TTCTCCGATCGGATCGATGA+AGG - chr3_4:73935431-73935450 None:intergenic 50.0%
CCATCGTGTCTATGCTTTGG+AGG - chr3_4:73935577-73935596 None:intergenic 50.0%
CCTCCAAAGCATAGACACGA+TGG + chr3_4:73935574-73935593 Msa0521270:CDS 50.0%
GTCCCATCGTGTCTATGCTT+TGG - chr3_4:73935580-73935599 None:intergenic 50.0%
GAGTCCTGCACCTCGAAAAT+GGG + chr3_4:73935627-73935646 Msa0521270:CDS 50.0%
TGTTAGGACTCCCAGTCCAA+AGG + chr3_4:73936057-73936076 Msa0521270:CDS 50.0%
GGTACATGTACGCAGTTCTC+TGG - chr3_4:73936171-73936190 None:intergenic 50.0%
TCTGCGTGTGCATCAGTTAG+AGG + chr3_4:73936353-73936372 Msa0521270:intron 50.0%
TCCCGCCCATTCTGTGTAAT+TGG - chr3_4:73936670-73936689 None:intergenic 50.0%
TGGCCACACAATCATCGTAC+CGG + chr3_4:73936697-73936716 Msa0521270:CDS 50.0%
CAACCGGTACGATGATTGTG+TGG - chr3_4:73936703-73936722 None:intergenic 50.0%
! CACACAATCATCGTACCGGT+TGG + chr3_4:73936701-73936720 Msa0521270:CDS 50.0%
TTTGGCACGAAGACCCAAGA+AGG - chr3_4:73936745-73936764 None:intergenic 50.0%
CTTTCCTATAAAGGCCCTGC+AGG + chr3_4:73937093-73937112 Msa0521270:intron 50.0%
TATGCCTGCAGGGCCTTTAT+AGG - chr3_4:73937100-73937119 None:intergenic 50.0%
TACCAAATGGTCGATCCTGC+TGG + chr3_4:73937274-73937293 Msa0521270:intron 50.0%
ACCAAATGGTCGATCCTGCT+GGG + chr3_4:73937275-73937294 Msa0521270:intron 50.0%
GCTACAAAAGTGAACCCAGC+AGG - chr3_4:73937292-73937311 None:intergenic 50.0%
TCTCTGTGTGCGTGTATGTG+AGG - chr3_4:73937906-73937925 None:intergenic 50.0%
CACAACAACATGAGGGAAGC+CGG + chr3_4:73938512-73938531 Msa0521270:intron 50.0%
TACAGGGCACACATGCACAT+AGG - chr3_4:73938712-73938731 None:intergenic 50.0%
!! AAGCCGAGCTTTGTTGGAAG+AGG + chr3_4:73938887-73938906 Msa0521270:CDS 50.0%
!! CGAGCTTTGTTGGAAGAGGT+TGG + chr3_4:73938891-73938910 Msa0521270:CDS 50.0%
TTCCATCTTGACTGGACAGC+GGG - chr3_4:73939144-73939163 None:intergenic 50.0%
TCGGGCTTATCATTAGCTGC+TGG + chr3_4:73940018-73940037 Msa0521270:three_prime_UTR 50.0%
CCTACTTCCGATGCATCGTA+TGG - chr3_4:73940081-73940100 None:intergenic 50.0%
CCATACGATGCATCGGAAGT+AGG + chr3_4:73940078-73940097 Msa0521270:three_prime_UTR 50.0%
ACGGGGAAGGACAGAAGTAA+TGG + chr3_4:73940306-73940325 Msa0521270:three_prime_UTR 50.0%
AGGCTGAGAGAAAAGCTCCA+TGG - chr3_4:73940367-73940386 None:intergenic 50.0%
! ATGGAGCTTTTCTCTCAGCC+TGG + chr3_4:73940366-73940385 Msa0521270:three_prime_UTR 50.0%
! TGGAGCTTTTCTCTCAGCCT+GGG + chr3_4:73940367-73940386 Msa0521270:three_prime_UTR 50.0%
! GCCTGGGCATGCTAAAGTTT+TGG + chr3_4:73940383-73940402 Msa0521270:three_prime_UTR 50.0%
CCCAAAACTTTAGCATGCCC+AGG - chr3_4:73940387-73940406 None:intergenic 50.0%
AAACCGAAGCAGATCCAGGA+AGG - chr3_4:73940521-73940540 None:intergenic 50.0%
CTTGAAACCGAAGCAGATCC+AGG - chr3_4:73940525-73940544 None:intergenic 50.0%
!! AGTGACTAGCCTTCTCTGCA+TGG - chr3_4:73940649-73940668 None:intergenic 50.0%
AGTAGCCTCTGGCCAATTTC+AGG - chr3_4:73940810-73940829 None:intergenic 50.0%
GACTGGATCTGTTCAGGTCA+AGG + chr3_4:73940916-73940935 Msa0521270:intron 50.0%
GGAACTTAGACGGAAGTCAC+TGG + chr3_4:73941045-73941064 Msa0521270:three_prime_UTR 50.0%
GTGAACAGGCAGAAACTGCT+TGG + chr3_4:73941863-73941882 Msa0521270:three_prime_UTR 50.0%
GTCCTGTCCTCATCTTCGTA+AGG - chr3_4:73941952-73941971 None:intergenic 50.0%
TTACTGCTCGACTCTACAGC+TGG - chr3_4:73942094-73942113 None:intergenic 50.0%
CGAAACACGCACGACACTCA+CGG + chr3_4:73935328-73935347 Msa0521270:five_prime_UTR 55.0%
GCGCACGCTAAGAGTTGAAG+CGG - chr3_4:73935372-73935391 None:intergenic 55.0%
TCCGATCGGATCGATGAAGG+AGG - chr3_4:73935428-73935447 None:intergenic 55.0%
! GACGGCACCGGAAAAAGCTA+GGG - chr3_4:73935455-73935474 None:intergenic 55.0%
! TGACGGCACCGGAAAAAGCT+AGG - chr3_4:73935456-73935475 None:intergenic 55.0%
CAATCCATGCCAAGAGGCAG+TGG - chr3_4:73935607-73935626 None:intergenic 55.0%
CACTGCCTCTTGGCATGGAT+TGG + chr3_4:73935605-73935624 Msa0521270:CDS 55.0%
GGACTCCAATCCATGCCAAG+AGG - chr3_4:73935613-73935632 None:intergenic 55.0%
GGAGTCCTGCACCTCGAAAA+TGG + chr3_4:73935626-73935645 Msa0521270:CDS 55.0%
AATCCAAGCGACCATGGTCG+AGG + chr3_4:73936210-73936229 Msa0521270:intron 55.0%
AGAATGGGCGGGATACCGAA+TGG + chr3_4:73936677-73936696 Msa0521270:CDS 55.0%
ACCCAGCAGGATCGACCATT+TGG - chr3_4:73937279-73937298 None:intergenic 55.0%
GTGACAAGTGCCCCACAAGA+CGG - chr3_4:73937316-73937335 None:intergenic 55.0%
GCTGGAGGGATGTTTCTCCT+TGG - chr3_4:73938840-73938859 None:intergenic 55.0%
AATCGCATGAGTCCCTTGGG+TGG - chr3_4:73938864-73938883 None:intergenic 55.0%
!! GCTACAGAGAAGGCGCTCTT+TGG + chr3_4:73939704-73939723 Msa0521270:intron 55.0%
!! ACAGAGAAGGCGCTCTTTGG+AGG + chr3_4:73939707-73939726 Msa0521270:intron 55.0%
CGACCTTCCTGGATCTGCTT+CGG + chr3_4:73940515-73940534 Msa0521270:three_prime_UTR 55.0%
AACGCACGCCAAGTCGCATA+TGG - chr3_4:73940752-73940771 None:intergenic 55.0%
! GCAGAACGATGTGCTGTTGC+AGG + chr3_4:73941265-73941284 Msa0521270:three_prime_UTR 55.0%
AGATGCTGCTAGAGAGCAGC+TGG + chr3_4:73941292-73941311 Msa0521270:three_prime_UTR 55.0%
CACTTCCGGTGTCCTTCTCT+AGG - chr3_4:73942211-73942230 None:intergenic 55.0%
CTATGCCGGCGTAAGCACAG+TGG - chr3_4:73935402-73935421 None:intergenic 60.0%
TTCGCCACTGCCTCTTGGCA+TGG + chr3_4:73935600-73935619 Msa0521270:CDS 60.0%
CAACCTCGACCATGGTCGCT+TGG - chr3_4:73936216-73936235 None:intergenic 60.0%
CTCCCGCTGTCCAGTCAAGA+TGG + chr3_4:73939139-73939158 Msa0521270:intron 60.0%
!! GAAGGCGCTCTTTGGAGGAG+TGG + chr3_4:73939712-73939731 Msa0521270:three_prime_UTR 60.0%
! GATGGCTCTGTCGACCTTCC+TGG + chr3_4:73940504-73940523 Msa0521270:three_prime_UTR 60.0%
GGGACTTCGCCACTGCCTCT+TGG + chr3_4:73935595-73935614 Msa0521270:CDS 65.0%
ATCCCTCCAGCGCCACCCAA+GGG + chr3_4:73938849-73938868 Msa0521270:CDS 65.0%
ATGAGTCCCTTGGGTGGCGC+TGG - chr3_4:73938858-73938877 None:intergenic 65.0%
CATCCCTCCAGCGCCACCCA+AGG + chr3_4:73938848-73938867 Msa0521270:CDS 70.0%
! GTCCCTTGGGTGGCGCTGGA+GGG - chr3_4:73938854-73938873 None:intergenic 70.0%
! AGTCCCTTGGGTGGCGCTGG+AGG - chr3_4:73938855-73938874 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 73935290 73942616 73935290 ID=Msa0521270;Name=Msa0521270
chr3_4 mRNA 73935290 73942616 73935290 ID=Msa0521270-mRNA-1;Parent=Msa0521270;Name=Msa0521270-mRNA-1;_AED=0.09;_eAED=0.09;_QI=269|0.63|0.75|0.83|0.81|0.83|12|1977|198
chr3_4 exon 73935290 73935648 73935290 ID=Msa0521270-mRNA-1:exon:20846;Parent=Msa0521270-mRNA-1
chr3_4 exon 73936040 73936078 73936040 ID=Msa0521270-mRNA-1:exon:20847;Parent=Msa0521270-mRNA-1
chr3_4 exon 73936649 73936789 73936649 ID=Msa0521270-mRNA-1:exon:20848;Parent=Msa0521270-mRNA-1
chr3_4 exon 73936857 73936862 73936857 ID=Msa0521270-mRNA-1:exon:20849;Parent=Msa0521270-mRNA-1
chr3_4 exon 73937692 73937790 73937692 ID=Msa0521270-mRNA-1:exon:20850;Parent=Msa0521270-mRNA-1
chr3_4 exon 73938822 73939058 73938822 ID=Msa0521270-mRNA-1:exon:20851;Parent=Msa0521270-mRNA-1
chr3_4 exon 73939711 73939819 73939711 ID=Msa0521270-mRNA-1:exon:20852;Parent=Msa0521270-mRNA-1
chr3_4 exon 73939935 73940743 73939935 ID=Msa0521270-mRNA-1:exon:20853;Parent=Msa0521270-mRNA-1
chr3_4 exon 73940932 73941096 73940932 ID=Msa0521270-mRNA-1:exon:20854;Parent=Msa0521270-mRNA-1
chr3_4 exon 73941221 73941463 73941221 ID=Msa0521270-mRNA-1:exon:20855;Parent=Msa0521270-mRNA-1
chr3_4 exon 73941835 73942053 73941835 ID=Msa0521270-mRNA-1:exon:20856;Parent=Msa0521270-mRNA-1
chr3_4 exon 73942200 73942616 73942200 ID=Msa0521270-mRNA-1:exon:20857;Parent=Msa0521270-mRNA-1
chr3_4 five_prime_UTR 73935290 73935558 73935290 ID=Msa0521270-mRNA-1:five_prime_utr;Parent=Msa0521270-mRNA-1
chr3_4 CDS 73935559 73935648 73935559 ID=Msa0521270-mRNA-1:cds;Parent=Msa0521270-mRNA-1
chr3_4 CDS 73936040 73936078 73936040 ID=Msa0521270-mRNA-1:cds;Parent=Msa0521270-mRNA-1
chr3_4 CDS 73936649 73936789 73936649 ID=Msa0521270-mRNA-1:cds;Parent=Msa0521270-mRNA-1
chr3_4 CDS 73936857 73936862 73936857 ID=Msa0521270-mRNA-1:cds;Parent=Msa0521270-mRNA-1
chr3_4 CDS 73937692 73937790 73937692 ID=Msa0521270-mRNA-1:cds;Parent=Msa0521270-mRNA-1
chr3_4 CDS 73938822 73939043 73938822 ID=Msa0521270-mRNA-1:cds;Parent=Msa0521270-mRNA-1
chr3_4 three_prime_UTR 73939044 73939058 73939044 ID=Msa0521270-mRNA-1:three_prime_utr;Parent=Msa0521270-mRNA-1
chr3_4 three_prime_UTR 73939711 73939819 73939711 ID=Msa0521270-mRNA-1:three_prime_utr;Parent=Msa0521270-mRNA-1
chr3_4 three_prime_UTR 73939935 73940743 73939935 ID=Msa0521270-mRNA-1:three_prime_utr;Parent=Msa0521270-mRNA-1
chr3_4 three_prime_UTR 73940932 73941096 73940932 ID=Msa0521270-mRNA-1:three_prime_utr;Parent=Msa0521270-mRNA-1
chr3_4 three_prime_UTR 73941221 73941463 73941221 ID=Msa0521270-mRNA-1:three_prime_utr;Parent=Msa0521270-mRNA-1
chr3_4 three_prime_UTR 73941835 73942053 73941835 ID=Msa0521270-mRNA-1:three_prime_utr;Parent=Msa0521270-mRNA-1
chr3_4 three_prime_UTR 73942200 73942616 73942200 ID=Msa0521270-mRNA-1:three_prime_utr;Parent=Msa0521270-mRNA-1
Gene Sequence

>Msa0521270

ATGCAGAGACGAAGTCCTCCAAAGCATAGACACGATGGGACTTCGCCACTGCCTCTTGGCATGGATTGGAGTCCTGCACCTCGAAAATGGTCATTCAGTACTGGGCATGTTAGGACTCCCAGTCCAAAGCTTATTTATCCTCCCTTTCCAATTACACAGAATGGGCGGGATACCGAATGGCCACACAATCATCGTACCGGTTGGAGTTATTGCATTATAATACCTTCTTGGGTCTTCGTGCCAAAATCAAAGAATTCAGATCCTATAGTGGTTTGGTTCTACAGGCTTCAAGTTGGTATACAATCACCAGAAGGGATTACAAATATCCATGGAGTACTAAGAAGGTTCAATGATTTTTTAAACTTGTATGTTGATCTTAAAAAGGAATTTCCAAGGAGAAACATCCCTCCAGCGCCACCCAAGGGACTCATGCGATTGAAAAGCCGAGCTTTGTTGGAAGAGGTTGGGAATTTCTTAAACTTGTTACAATACCAATTGTTGCATGTTTGGGATTATGGATCTGCATATGTCCTCTTGCTTGAATTTAATTACTTTATACAAACATGGTCTAAATGCATCACAACTGAAAATTACTAG
Protein sequence

>Msa0521270

MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWSFSTGHVRTPSPKLIYPPFPITQNGRDTEWPHNHRTGWSYCIIIPSWVFVPKSKNSDPIVVWFYRLQVGIQSPEGITNIHGVLRRFNDFLNLYVDLKKEFPRRNIPPAPPKGLMRLKSRALLEEVGNFLNLLQYQLLHVWDYGSAYVLLLEFNYFIQTWSKCITTENY*