Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0521900 | KEH36068.1 | 94.316 | 475 | 27 | 0 | 15 | 489 | 1 | 475 | 0.0 | 919 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0521900 | sp|Q9FN03|UVR8_ARATH | 27.794 | 349 | 200 | 12 | 17 | 365 | 95 | 391 | 6.72e-24 | 107 |
Msa0521900 | sp|Q9FN03|UVR8_ARATH | 34.728 | 239 | 117 | 13 | 113 | 347 | 15 | 218 | 5.76e-19 | 92.8 |
Msa0521900 | sp|Q9FN03|UVR8_ARATH | 27.586 | 290 | 166 | 9 | 61 | 344 | 16 | 267 | 3.25e-18 | 90.5 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0521900 | A0A072V3X2 | 94.316 | 475 | 27 | 0 | 15 | 489 | 1 | 475 | 0.0 | 919 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0012740 | Msa0521900 | 0.811120 | 8.207278e-51 | -8.615850e-47 |
Msa0030030 | Msa0521900 | 0.813223 | 2.853898e-51 | -8.615850e-47 |
Msa0032040 | Msa0521900 | 0.819616 | 1.057838e-52 | -8.615850e-47 |
Msa0039200 | Msa0521900 | 0.817093 | 3.942189e-52 | -8.615850e-47 |
Msa0040190 | Msa0521900 | 0.845240 | 4.594089e-59 | -8.615850e-47 |
Msa0077330 | Msa0521900 | 0.807065 | 6.064592e-50 | -8.615850e-47 |
Msa0086820 | Msa0521900 | 0.820675 | 6.052351e-53 | -8.615850e-47 |
Msa0087880 | Msa0521900 | 0.841164 | 5.610553e-58 | -8.615850e-47 |
Msa0133670 | Msa0521900 | 0.814036 | 1.889851e-51 | -8.615850e-47 |
Msa0133880 | Msa0521900 | 0.819146 | 1.353668e-52 | -8.615850e-47 |
Msa0134550 | Msa0521900 | 0.841791 | 3.835386e-58 | -8.615850e-47 |
Msa0169960 | Msa0521900 | 0.806153 | 9.445982e-50 | -8.615850e-47 |
Msa0181290 | Msa0521900 | 0.823944 | 1.054167e-53 | -8.615850e-47 |
Msa0184120 | Msa0521900 | 0.821723 | 3.469210e-53 | -8.615850e-47 |
Msa0189050 | Msa0521900 | 0.836417 | 9.474012e-57 | -8.615850e-47 |
Msa0221800 | Msa0521900 | 0.802631 | 5.118236e-49 | -8.615850e-47 |
Msa0231310 | Msa0521900 | 0.839289 | 1.731981e-57 | -8.615850e-47 |
Msa0365150 | Msa0521900 | 0.820113 | 8.143881e-53 | -8.615850e-47 |
Msa0370510 | Msa0521900 | 0.819819 | 9.507499e-53 | -8.615850e-47 |
Msa0383670 | Msa0521900 | 0.930723 | 1.081130e-93 | -8.615850e-47 |
Msa0418000 | Msa0521900 | 0.813589 | 2.370599e-51 | -8.615850e-47 |
Msa0423600 | Msa0521900 | 0.810877 | 9.262011e-51 | -8.615850e-47 |
Msa0427050 | Msa0521900 | 0.830560 | 2.741910e-55 | -8.615850e-47 |
Msa0440110 | Msa0521900 | 0.829809 | 4.181049e-55 | -8.615850e-47 |
Msa0466100 | Msa0521900 | 0.803076 | 4.142750e-49 | -8.615850e-47 |
Msa0471080 | Msa0521900 | 0.802329 | 5.907435e-49 | -8.615850e-47 |
Msa0475830 | Msa0521900 | 0.843108 | 1.716079e-58 | -8.615850e-47 |
Msa0256170 | Msa0521900 | 0.818791 | 1.630202e-52 | -8.615850e-47 |
Msa0268460 | Msa0521900 | 0.802402 | 5.707912e-49 | -8.615850e-47 |
Msa0286790 | Msa0521900 | 0.806755 | 7.050654e-50 | -8.615850e-47 |
Msa0306130 | Msa0521900 | 0.845894 | 3.053746e-59 | -8.615850e-47 |
Msa0309160 | Msa0521900 | 0.837797 | 4.204006e-57 | -8.615850e-47 |
Msa0312780 | Msa0521900 | 0.803744 | 3.012703e-49 | -8.615850e-47 |
Msa0330270 | Msa0521900 | 0.827406 | 1.592345e-54 | -8.615850e-47 |
Msa0336270 | Msa0521900 | 0.819846 | 9.373800e-53 | -8.615850e-47 |
Msa0338570 | Msa0521900 | 0.807633 | 4.596268e-50 | -8.615850e-47 |
Msa0498920 | Msa0521900 | 0.839613 | 1.427111e-57 | -8.615850e-47 |
Msa0521900 | Msa0568490 | 0.833244 | 5.959790e-56 | -8.615850e-47 |
Msa0521900 | Msa0568810 | 0.803337 | 3.657205e-49 | -8.615850e-47 |
Msa0521900 | Msa0587060 | 0.810655 | 1.034833e-50 | -8.615850e-47 |
Msa0521900 | Msa0606060 | 0.806331 | 8.664543e-50 | -8.615850e-47 |
Msa0521900 | Msa0619060 | 0.800612 | 1.328119e-48 | -8.615850e-47 |
Msa0521900 | Msa0621890 | 0.819517 | 1.114022e-52 | -8.615850e-47 |
Msa0521900 | Msa0626890 | 0.818767 | 1.650728e-52 | -8.615850e-47 |
Msa0521900 | Msa0635990 | 0.810015 | 1.422209e-50 | -8.615850e-47 |
Msa0521900 | Msa0647000 | 0.817966 | 2.506661e-52 | -8.615850e-47 |
Msa0521900 | Msa0654060 | 0.811234 | 7.752570e-51 | -8.615850e-47 |
Msa0521900 | Msa0657820 | 0.810544 | 1.093452e-50 | -8.615850e-47 |
Msa0521900 | Msa0687320 | 0.814730 | 1.327351e-51 | -8.615850e-47 |
Msa0521900 | Msa0714020 | 0.805371 | 1.378551e-49 | -8.615850e-47 |
Msa0521900 | Msa0714160 | 0.808145 | 3.576979e-50 | -8.615850e-47 |
Msa0521900 | Msa0739570 | 0.830830 | 2.354621e-55 | -8.615850e-47 |
Msa0521900 | Msa0766880 | 0.817868 | 2.637882e-52 | -8.615850e-47 |
Msa0521900 | Msa0772210 | 0.806497 | 7.993863e-50 | -8.615850e-47 |
Msa0521900 | Msa0782330 | 0.830316 | 3.145020e-55 | -8.615850e-47 |
Msa0521900 | Msa0804340 | 0.812988 | 3.213011e-51 | -8.615850e-47 |
Msa0521900 | Msa0842270 | 0.811577 | 6.529960e-51 | -8.615850e-47 |
Msa0521900 | Msa0860270 | 0.847327 | 1.240366e-59 | -8.615850e-47 |
Msa0521900 | Msa0895860 | 0.809824 | 1.563574e-50 | -8.615850e-47 |
Msa0521900 | Msa0975180 | 0.814934 | 1.196373e-51 | -8.615850e-47 |
Msa0521900 | Msa1016130 | 0.805334 | 1.403465e-49 | -8.615850e-47 |
Msa0521900 | Msa1024580 | 0.801479 | 8.831533e-49 | -8.615850e-47 |
Msa0521900 | Msa1081600 | 0.807368 | 5.231392e-50 | -8.615850e-47 |
Msa0521900 | Msa1081850 | 0.811439 | 6.997330e-51 | -8.615850e-47 |
Msa0521900 | Msa1108530 | 0.814820 | 1.267743e-51 | -8.615850e-47 |
Msa0521900 | Msa1108780 | 0.802504 | 5.438144e-49 | -8.615850e-47 |
Msa0521900 | Msa1117830 | 0.807931 | 3.972549e-50 | -8.615850e-47 |
Msa0521900 | Msa1120540 | 0.811994 | 5.300251e-51 | -8.615850e-47 |
Msa0521900 | Msa1123340 | 0.807714 | 4.416606e-50 | -8.615850e-47 |
Msa0521900 | Msa1126910 | 0.801350 | 9.384328e-49 | -8.615850e-47 |
Msa0521900 | Msa1152280 | 0.822983 | 1.768926e-53 | -8.615850e-47 |
Msa0521900 | Msa1157160 | 0.818544 | 1.854947e-52 | -8.615850e-47 |
Msa0521900 | Msa1161160 | 0.803462 | 3.446144e-49 | -8.615850e-47 |
Msa0521900 | Msa1161520 | 0.813894 | 2.031651e-51 | -8.615850e-47 |
Msa0521900 | Msa1166370 | 0.803218 | 3.872191e-49 | -8.615850e-47 |
Msa0521900 | Msa1198820 | 0.800048 | 1.730476e-48 | -8.615850e-47 |
Msa0521900 | Msa1204110 | 0.826520 | 2.594090e-54 | -8.615850e-47 |
Msa0521900 | Msa1208070 | 0.855384 | 6.542467e-62 | -8.615850e-47 |
Msa0521900 | Msa1208710 | 0.818247 | 2.164976e-52 | -8.615850e-47 |
Msa0521900 | Msa1215660 | 0.814834 | 1.258811e-51 | -8.615850e-47 |
Msa0521900 | Msa1220230 | 0.805565 | 1.255257e-49 | -8.615850e-47 |
Msa0521900 | Msa1221570 | -0.811292 | 7.530806e-51 | -8.615850e-47 |
Msa0521900 | Msa1233770 | 0.803458 | 3.452800e-49 | -8.615850e-47 |
Msa0521900 | Msa1256280 | 0.815378 | 9.531340e-52 | -8.615850e-47 |
Msa0521900 | Msa1258950 | 0.815385 | 9.500651e-52 | -8.615850e-47 |
Msa0521900 | Msa1298740 | 0.824867 | 6.394451e-54 | -8.615850e-47 |
Msa0521900 | Msa1319440 | 0.806479 | 8.063568e-50 | -8.615850e-47 |
Msa0521900 | Msa1337190 | 0.814012 | 1.912882e-51 | -8.615850e-47 |
Msa0521900 | Msa1340620 | 0.813887 | 2.038538e-51 | -8.615850e-47 |
Msa0521900 | Msa1355260 | 0.807851 | 4.129606e-50 | -8.615850e-47 |
Msa0521900 | Msa1357170 | 0.802793 | 4.739710e-49 | -8.615850e-47 |
Msa0521900 | Msa1385940 | 0.808431 | 3.108418e-50 | -8.615850e-47 |
Msa0521900 | Msa1388230 | 0.803724 | 3.040569e-49 | -8.615850e-47 |
Msa0521900 | Msa1390410 | 0.838521 | 2.737603e-57 | -8.615850e-47 |
Msa0521900 | Msa1397110 | 0.806757 | 7.043206e-50 | -8.615850e-47 |
Msa0521900 | Msa1400600 | 0.800591 | 1.341064e-48 | -8.615850e-47 |
Msa0521900 | Msa1405190 | 0.824570 | 7.514813e-54 | -8.615850e-47 |
Msa0521900 | Msa1405470 | 0.806729 | 7.139612e-50 | -8.615850e-47 |
Msa0521900 | Msa1415120 | 0.855316 | 6.844805e-62 | -8.615850e-47 |
Msa0521900 | Msa1428440 | 0.802079 | 6.650946e-49 | -8.615850e-47 |
Msa0521900 | Msa1450420 | 0.806401 | 8.373459e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0521900 | MtrunA17_Chr3g0140201 | 94.316 | 475 | 27 | 0 | 15 | 489 | 1 | 475 | 0.0 | 919 |
Msa0521900 | MtrunA17_Chr1g0146211 | 64.171 | 374 | 118 | 7 | 15 | 374 | 1 | 372 | 1.30e-166 | 475 |
Msa0521900 | MtrunA17_Chr8g0384631 | 30.421 | 309 | 174 | 12 | 60 | 365 | 50 | 320 | 1.94e-24 | 104 |
Msa0521900 | MtrunA17_Chr3g0130621 | 35.146 | 239 | 116 | 12 | 113 | 347 | 15 | 218 | 9.36e-23 | 100 |
Msa0521900 | MtrunA17_Chr3g0130621 | 28.117 | 377 | 217 | 14 | 39 | 403 | 97 | 431 | 1.42e-22 | 100 |
Msa0521900 | MtrunA17_Chr3g0130621 | 26.224 | 286 | 174 | 10 | 61 | 344 | 16 | 266 | 1.59e-18 | 87.8 |
Msa0521900 | MtrunA17_Chr4g0013271 | 27.431 | 288 | 181 | 10 | 65 | 348 | 123 | 386 | 3.12e-19 | 91.3 |
Msa0521900 | MtrunA17_Chr4g0013271 | 26.846 | 298 | 172 | 13 | 68 | 354 | 24 | 286 | 1.62e-11 | 67.0 |
Msa0521900 | MtrunA17_Chr7g0220131 | 29.054 | 296 | 141 | 14 | 79 | 349 | 142 | 393 | 4.11e-19 | 90.1 |
Msa0521900 | MtrunA17_Chr7g0220131 | 26.894 | 264 | 118 | 10 | 116 | 325 | 65 | 307 | 5.67e-16 | 80.1 |
Msa0521900 | MtrunA17_Chr1g0167471 | 25.000 | 320 | 203 | 9 | 51 | 363 | 317 | 606 | 6.72e-17 | 84.0 |
Msa0521900 | MtrunA17_Chr3g0094741 | 26.646 | 319 | 198 | 11 | 51 | 363 | 362 | 650 | 7.86e-17 | 84.0 |
Msa0521900 | MtrunA17_Chr3g0094741 | 27.126 | 247 | 137 | 8 | 115 | 348 | 321 | 537 | 3.73e-14 | 75.5 |
Msa0521900 | MtrunA17_Chr6g0457381 | 31.319 | 182 | 101 | 6 | 51 | 230 | 188 | 347 | 6.75e-16 | 79.7 |
Msa0521900 | MtrunA17_Chr6g0457381 | 26.710 | 307 | 176 | 14 | 51 | 347 | 80 | 347 | 8.97e-15 | 76.3 |
Msa0521900 | MtrunA17_Chr1g0202151 | 26.974 | 304 | 189 | 10 | 51 | 347 | 322 | 599 | 2.20e-15 | 79.3 |
Msa0521900 | MtrunA17_Chr1g0202151 | 27.119 | 295 | 160 | 12 | 76 | 347 | 233 | 495 | 5.71e-15 | 78.2 |
Msa0521900 | MtrunA17_Chr5g0442001 | 26.603 | 312 | 178 | 12 | 65 | 363 | 366 | 639 | 3.60e-15 | 78.6 |
Msa0521900 | MtrunA17_Chr5g0442001 | 28.049 | 246 | 134 | 8 | 115 | 347 | 311 | 526 | 1.59e-14 | 76.6 |
Msa0521900 | MtrunA17_Chr7g0244411 | 28.125 | 256 | 148 | 10 | 110 | 361 | 368 | 591 | 3.87e-15 | 78.6 |
Msa0521900 | MtrunA17_Chr7g0244411 | 24.138 | 290 | 173 | 9 | 75 | 347 | 220 | 479 | 9.24e-12 | 67.8 |
Msa0521900 | MtrunA17_Chr3g0109811 | 25.305 | 328 | 193 | 13 | 49 | 363 | 345 | 633 | 4.65e-15 | 78.2 |
Msa0521900 | MtrunA17_Chr6g0463421 | 27.358 | 318 | 192 | 13 | 51 | 361 | 319 | 604 | 2.35e-14 | 76.3 |
Msa0521900 | MtrunA17_Chr6g0463421 | 25.260 | 289 | 171 | 8 | 76 | 347 | 232 | 492 | 5.64e-14 | 74.7 |
Msa0521900 | MtrunA17_Chr3g0142381 | 29.339 | 242 | 134 | 9 | 116 | 347 | 61 | 275 | 3.65e-14 | 74.7 |
Msa0521900 | MtrunA17_Chr5g0404371 | 23.925 | 372 | 194 | 14 | 50 | 370 | 105 | 438 | 1.07e-13 | 73.2 |
Msa0521900 | MtrunA17_Chr8g0362061 | 26.059 | 307 | 188 | 10 | 65 | 363 | 342 | 617 | 2.28e-13 | 72.8 |
Msa0521900 | MtrunA17_Chr8g0362061 | 23.810 | 294 | 175 | 8 | 75 | 347 | 238 | 503 | 1.40e-12 | 70.5 |
Msa0521900 | MtrunA17_Chr3g0123301 | 23.200 | 375 | 236 | 14 | 67 | 430 | 153 | 486 | 2.33e-11 | 65.9 |
Msa0521900 | MtrunA17_Chr3g0130871 | 27.103 | 321 | 174 | 12 | 61 | 357 | 30 | 314 | 2.88e-11 | 64.7 |
Msa0521900 | MtrunA17_Chr3g0130871 | 28.514 | 249 | 137 | 12 | 111 | 350 | 27 | 243 | 8.10e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0521900 | AT5G11580.1 | 51.440 | 486 | 200 | 9 | 7 | 485 | 93 | 549 | 1.31e-166 | 482 |
Msa0521900 | AT5G11580.2 | 53.428 | 423 | 165 | 8 | 70 | 485 | 1 | 398 | 2.62e-154 | 445 |
Msa0521900 | AT5G63860.1 | 27.794 | 349 | 200 | 12 | 17 | 365 | 95 | 391 | 6.83e-25 | 107 |
Msa0521900 | AT5G63860.1 | 34.728 | 239 | 117 | 13 | 113 | 347 | 15 | 218 | 5.86e-20 | 92.8 |
Msa0521900 | AT5G63860.1 | 27.586 | 290 | 166 | 9 | 61 | 344 | 16 | 267 | 3.30e-19 | 90.5 |
Msa0521900 | AT4G14368.1 | 29.373 | 303 | 180 | 12 | 65 | 363 | 327 | 599 | 5.38e-20 | 94.4 |
Msa0521900 | AT4G14368.1 | 23.448 | 290 | 175 | 10 | 75 | 347 | 226 | 485 | 2.47e-12 | 70.1 |
Msa0521900 | AT4G14368.2 | 29.373 | 303 | 180 | 12 | 65 | 363 | 325 | 597 | 6.61e-20 | 94.0 |
Msa0521900 | AT4G14368.2 | 23.448 | 290 | 175 | 10 | 75 | 347 | 224 | 483 | 4.55e-12 | 69.3 |
Msa0521900 | AT4G14368.4 | 29.373 | 303 | 180 | 12 | 65 | 363 | 327 | 599 | 6.68e-20 | 94.0 |
Msa0521900 | AT4G14368.4 | 23.448 | 290 | 175 | 10 | 75 | 347 | 226 | 485 | 4.59e-12 | 69.3 |
Msa0521900 | AT4G14368.3 | 29.373 | 303 | 180 | 12 | 65 | 363 | 320 | 592 | 6.72e-20 | 94.0 |
Msa0521900 | AT4G14368.3 | 23.448 | 290 | 175 | 10 | 75 | 347 | 219 | 478 | 5.00e-12 | 68.9 |
Msa0521900 | AT5G16040.1 | 27.976 | 336 | 191 | 16 | 43 | 368 | 72 | 366 | 1.74e-19 | 90.9 |
Msa0521900 | AT3G02300.2 | 31.818 | 286 | 142 | 15 | 81 | 349 | 154 | 403 | 4.82e-19 | 90.1 |
Msa0521900 | AT3G02300.2 | 27.376 | 263 | 118 | 9 | 116 | 325 | 75 | 317 | 1.10e-16 | 82.8 |
Msa0521900 | AT3G02300.1 | 31.818 | 286 | 142 | 15 | 81 | 349 | 143 | 392 | 5.15e-19 | 90.1 |
Msa0521900 | AT3G02300.1 | 27.376 | 263 | 118 | 9 | 116 | 325 | 64 | 306 | 1.32e-16 | 82.8 |
Msa0521900 | AT5G12350.1 | 27.451 | 306 | 182 | 11 | 65 | 363 | 365 | 637 | 3.43e-18 | 88.6 |
Msa0521900 | AT5G12350.1 | 29.098 | 244 | 132 | 7 | 115 | 347 | 310 | 523 | 4.89e-18 | 88.2 |
Msa0521900 | AT5G19420.1 | 28.455 | 246 | 131 | 7 | 115 | 347 | 314 | 527 | 4.69e-18 | 88.2 |
Msa0521900 | AT5G19420.1 | 27.097 | 310 | 178 | 12 | 65 | 363 | 369 | 641 | 4.37e-17 | 85.1 |
Msa0521900 | AT5G19420.2 | 27.869 | 244 | 135 | 6 | 115 | 347 | 348 | 561 | 4.83e-18 | 88.2 |
Msa0521900 | AT5G19420.2 | 27.097 | 310 | 178 | 12 | 65 | 363 | 403 | 675 | 4.70e-17 | 85.1 |
Msa0521900 | AT5G19420.3 | 28.455 | 246 | 131 | 7 | 115 | 347 | 314 | 527 | 7.37e-18 | 87.4 |
Msa0521900 | AT5G19420.3 | 27.097 | 310 | 178 | 12 | 65 | 363 | 369 | 641 | 6.30e-17 | 84.3 |
Msa0521900 | AT3G23270.2 | 28.053 | 303 | 184 | 11 | 65 | 363 | 312 | 584 | 2.53e-17 | 85.9 |
Msa0521900 | AT3G23270.2 | 24.407 | 295 | 180 | 9 | 68 | 347 | 204 | 470 | 3.03e-13 | 72.8 |
Msa0521900 | AT5G48330.1 | 25.434 | 346 | 177 | 12 | 46 | 347 | 124 | 432 | 3.36e-17 | 84.3 |
Msa0521900 | AT3G23270.1 | 28.053 | 303 | 184 | 11 | 65 | 363 | 308 | 580 | 3.37e-17 | 85.5 |
Msa0521900 | AT3G23270.1 | 24.407 | 295 | 180 | 9 | 68 | 347 | 200 | 466 | 3.89e-13 | 72.8 |
Msa0521900 | AT5G48330.2 | 25.434 | 346 | 177 | 12 | 46 | 347 | 123 | 431 | 3.41e-17 | 84.3 |
Msa0521900 | AT3G47660.1 | 25.937 | 347 | 181 | 15 | 51 | 347 | 290 | 610 | 4.40e-17 | 85.1 |
Msa0521900 | AT3G47660.3 | 26.647 | 334 | 169 | 15 | 64 | 347 | 300 | 607 | 4.51e-17 | 85.1 |
Msa0521900 | AT3G47660.5 | 26.647 | 334 | 169 | 15 | 64 | 347 | 300 | 607 | 4.51e-17 | 85.1 |
Msa0521900 | AT3G47660.2 | 26.647 | 334 | 169 | 15 | 64 | 347 | 303 | 610 | 4.81e-17 | 84.7 |
Msa0521900 | AT1G65920.1 | 26.557 | 305 | 186 | 10 | 51 | 347 | 335 | 609 | 5.01e-17 | 84.7 |
Msa0521900 | AT1G65920.2 | 26.557 | 305 | 186 | 10 | 51 | 347 | 289 | 563 | 6.01e-17 | 84.7 |
Msa0521900 | AT3G47660.4 | 25.937 | 347 | 181 | 15 | 51 | 347 | 326 | 646 | 6.26e-17 | 84.7 |
Msa0521900 | AT3G47660.7 | 25.937 | 347 | 181 | 15 | 51 | 347 | 145 | 465 | 7.27e-17 | 84.3 |
Msa0521900 | AT3G47660.6 | 25.937 | 347 | 181 | 15 | 51 | 347 | 212 | 532 | 9.40e-17 | 84.0 |
Msa0521900 | AT3G55580.1 | 31.923 | 260 | 124 | 10 | 112 | 347 | 233 | 463 | 1.17e-16 | 82.8 |
Msa0521900 | AT3G55580.1 | 26.300 | 327 | 156 | 14 | 22 | 317 | 213 | 485 | 8.85e-13 | 70.9 |
Msa0521900 | AT3G02510.3 | 27.164 | 335 | 193 | 17 | 45 | 369 | 16 | 309 | 7.20e-16 | 79.3 |
Msa0521900 | AT3G02510.1 | 27.164 | 335 | 193 | 17 | 45 | 369 | 74 | 367 | 2.22e-15 | 78.2 |
Msa0521900 | AT5G42140.2 | 25.697 | 323 | 199 | 13 | 49 | 363 | 318 | 607 | 3.47e-15 | 79.0 |
Msa0521900 | AT5G42140.2 | 26.780 | 295 | 168 | 14 | 74 | 347 | 226 | 493 | 2.27e-13 | 73.6 |
Msa0521900 | AT5G42140.1 | 25.697 | 323 | 199 | 13 | 49 | 363 | 318 | 607 | 3.47e-15 | 79.0 |
Msa0521900 | AT5G42140.1 | 26.780 | 295 | 168 | 14 | 74 | 347 | 226 | 493 | 2.27e-13 | 73.6 |
Msa0521900 | AT1G76950.1 | 26.689 | 296 | 162 | 11 | 76 | 347 | 235 | 499 | 2.30e-14 | 76.6 |
Msa0521900 | AT1G76950.1 | 26.460 | 291 | 180 | 11 | 65 | 347 | 339 | 603 | 2.15e-13 | 73.6 |
Msa0521900 | AT3G53830.3 | 26.333 | 300 | 167 | 9 | 48 | 347 | 202 | 447 | 5.98e-14 | 74.3 |
Msa0521900 | AT3G53830.3 | 29.960 | 247 | 141 | 11 | 13 | 249 | 240 | 464 | 9.42e-11 | 64.3 |
Msa0521900 | AT3G53830.4 | 26.667 | 300 | 166 | 10 | 48 | 347 | 230 | 475 | 6.58e-14 | 74.3 |
Msa0521900 | AT5G16040.2 | 28.571 | 224 | 132 | 9 | 44 | 262 | 73 | 273 | 7.10e-13 | 70.1 |
Msa0521900 | AT5G16040.2 | 30.583 | 206 | 105 | 8 | 43 | 241 | 126 | 300 | 3.11e-11 | 65.1 |
Msa0521900 | AT5G60870.3 | 26.991 | 226 | 128 | 7 | 51 | 265 | 26 | 225 | 6.86e-12 | 66.6 |
Msa0521900 | AT5G08710.1 | 25.338 | 296 | 183 | 9 | 65 | 347 | 139 | 409 | 1.20e-11 | 67.0 |
Msa0521900 | AT1G69710.1 | 30.058 | 173 | 102 | 5 | 100 | 267 | 446 | 604 | 1.24e-11 | 67.8 |
Msa0521900 | AT1G69710.2 | 30.058 | 173 | 102 | 5 | 100 | 267 | 433 | 591 | 1.30e-11 | 67.8 |
Msa0521900 | AT5G60870.1 | 26.991 | 226 | 128 | 7 | 51 | 265 | 195 | 394 | 1.88e-11 | 66.6 |
Msa0521900 | AT3G15430.6 | 28.959 | 221 | 131 | 9 | 143 | 362 | 238 | 433 | 1.88e-11 | 66.6 |
Msa0521900 | AT3G15430.4 | 28.959 | 221 | 131 | 9 | 143 | 362 | 238 | 433 | 1.88e-11 | 66.6 |
Msa0521900 | AT3G15430.2 | 28.959 | 221 | 131 | 9 | 143 | 362 | 238 | 433 | 1.88e-11 | 66.6 |
Msa0521900 | AT3G15430.3 | 28.959 | 221 | 131 | 9 | 143 | 362 | 238 | 433 | 1.88e-11 | 66.6 |
Msa0521900 | AT3G15430.5 | 28.959 | 221 | 131 | 9 | 143 | 362 | 238 | 433 | 1.88e-11 | 66.6 |
Msa0521900 | AT3G15430.1 | 28.959 | 221 | 131 | 9 | 143 | 362 | 238 | 433 | 1.88e-11 | 66.6 |
Find 186 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTGTTTCTGCTATTATTTC+GGG | 0.152473 | 3_4:+74927381 | None:intergenic |
CAGAGAGAGTATTTGATTTC+AGG | 0.161810 | 3_4:-74930713 | None:intergenic |
CTGTGTCCTTGACTACTTTA+TGG | 0.167956 | 3_4:-74928571 | Msa0521900:CDS |
ATCTGTTTCTGCTATTATTT+CGG | 0.168624 | 3_4:+74927380 | None:intergenic |
CATTGTGGCAATTCTTTAAT+AGG | 0.205233 | 3_4:+74927819 | None:intergenic |
GGGATATCTTGCTCATTAAA+AGG | 0.234552 | 3_4:+74927255 | None:intergenic |
CCCTGTTTCAATGCAGAATT+CGG | 0.240289 | 3_4:-74927235 | Msa0521900:CDS |
TATCATAGTCTTGCTCTTGC+AGG | 0.269551 | 3_4:-74930268 | Msa0521900:intron |
CACCTTCTTTGCTTTCTTGT+GGG | 0.270672 | 3_4:+74928243 | None:intergenic |
AAAAGACTCCAAGCATATTA+AGG | 0.307233 | 3_4:+74928663 | None:intergenic |
TCACACACTCTTCTTCTTAC+TGG | 0.316495 | 3_4:-74930578 | Msa0521900:intron |
TACTTGACGAGGAGTCTTCT+TGG | 0.318124 | 3_4:-74927998 | Msa0521900:CDS |
AGATGGGTCTGTTGAAGAAT+TGG | 0.319222 | 3_4:+74928461 | None:intergenic |
AGCCATGGCCAATTAGGTTT+GGG | 0.319335 | 3_4:-74928059 | Msa0521900:CDS |
ACAAGTGTTGTGTCCTCAAC+TGG | 0.324550 | 3_4:-74927759 | Msa0521900:CDS |
TATAACAGCCATGGCCAATT+AGG | 0.326743 | 3_4:-74928065 | Msa0521900:CDS |
AGTATTTGATTTCAGGAGAT+TGG | 0.326950 | 3_4:-74930706 | None:intergenic |
CCCGAATTCTGCATTGAAAC+AGG | 0.327945 | 3_4:+74927234 | None:intergenic |
TCAAACAAAGCTATCTATAA+TGG | 0.330445 | 3_4:-74927319 | Msa0521900:CDS |
AGCAGACCATCTAAGCAAAA+TGG | 0.346610 | 3_4:+74926957 | None:intergenic |
AAAGATCAAAGAAATTATAA+AGG | 0.357258 | 3_4:-74927088 | Msa0521900:CDS |
CAACTGGGGACGTGTGGTCA+TGG | 0.360607 | 3_4:-74927743 | Msa0521900:CDS |
GGGACATAAGGTGTGGTCTT+GGG | 0.367064 | 3_4:-74927550 | Msa0521900:CDS |
CAGCCATGGCCAATTAGGTT+TGG | 0.369616 | 3_4:-74928060 | Msa0521900:CDS |
TAGTTCCTTGCTTACTTAGC+AGG | 0.373149 | 3_4:-74928503 | Msa0521900:CDS |
CGCCCCACACACAACTTTAA+CGG | 0.376768 | 3_4:+74927599 | None:intergenic |
ACACTGTGTTTAGTTTCATT+AGG | 0.378803 | 3_4:+74930319 | None:intergenic |
ACCTTTGGCCTTGGTGAGAA+TGG | 0.379729 | 3_4:-74927885 | Msa0521900:CDS |
TCTTTGAGACCCTCAATTGT+TGG | 0.379777 | 3_4:+74927453 | None:intergenic |
GAAAGCATGTGCTGGACCTT+TGG | 0.382764 | 3_4:-74927900 | Msa0521900:CDS |
CAGATGATAGGAAGCTAGTT+AGG | 0.383103 | 3_4:-74927167 | Msa0521900:CDS |
CTCTGGCTATTGATAATTGC+GGG | 0.385453 | 3_4:-74928289 | Msa0521900:CDS |
GCCCCACACACAACTTTAAC+GGG | 0.386125 | 3_4:+74927600 | None:intergenic |
AATGCAGAATTCGGGTTCAA+TGG | 0.388876 | 3_4:-74927226 | Msa0521900:CDS |
TGTGATAGCTTGTCGGGGTT+CGG | 0.391434 | 3_4:+74930629 | None:intergenic |
AGAGGAATGTTTGGACGGCT+TGG | 0.396014 | 3_4:-74930394 | Msa0521900:five_prime_UTR |
CCTGTTTCAATGCAGAATTC+GGG | 0.396597 | 3_4:-74927234 | Msa0521900:CDS |
ATTTATTTACCTCTGAAGAT+TGG | 0.398386 | 3_4:+74927058 | None:intergenic |
TCTTGGGGTAGGGGAAGGAG+TGG | 0.407624 | 3_4:-74927534 | Msa0521900:CDS |
AAAATCTACTATGCTACTCT+TGG | 0.414016 | 3_4:-74928091 | Msa0521900:CDS |
GTCGGGGTTCGGATAACTTC+CGG | 0.414083 | 3_4:+74930640 | None:intergenic |
AATCGTGCTGAAACAAATTC+TGG | 0.415541 | 3_4:-74927684 | Msa0521900:CDS |
AACTGGGGACGTGTGGTCAT+GGG | 0.415664 | 3_4:-74927742 | Msa0521900:CDS |
CCACCTTCTTTGCTTTCTTG+TGG | 0.415767 | 3_4:+74928242 | None:intergenic |
AGAAGACAAAGCATCAATAA+AGG | 0.417834 | 3_4:-74928433 | Msa0521900:intron |
TGTTGGGGTAGAGGAATGTT+TGG | 0.418285 | 3_4:-74930403 | Msa0521900:five_prime_UTR |
GATGGGTCTGTTGAAGAATT+GGG | 0.418538 | 3_4:+74928462 | None:intergenic |
CCTTGGGAATGGAAAAGAAA+TGG | 0.419157 | 3_4:-74927508 | Msa0521900:CDS |
TGTTAGAGGCAGCAGATGAT+AGG | 0.420451 | 3_4:-74927179 | Msa0521900:CDS |
TGGGGAATGGAGAAGGGTCT+TGG | 0.421651 | 3_4:-74927723 | Msa0521900:CDS |
GTTTCACACCAACACCAGTC+TGG | 0.423485 | 3_4:-74928202 | Msa0521900:CDS |
GGATGTTTCCCCACATCCAT+AGG | 0.424782 | 3_4:+74928264 | None:intergenic |
ATCTTGTGTGATAGCTTGTC+GGG | 0.426650 | 3_4:+74930623 | None:intergenic |
CAATGGATATTGCAAAAGAA+TGG | 0.431243 | 3_4:-74927209 | Msa0521900:CDS |
GAGGAATGTTTGGACGGCTT+GGG | 0.431885 | 3_4:-74930393 | Msa0521900:five_prime_UTR |
TAAACACAGTGTTAAAATAG+TGG | 0.432137 | 3_4:-74930308 | Msa0521900:five_prime_UTR |
GCTTTGTCTTCTGCTTCAGA+TGG | 0.432694 | 3_4:+74928444 | None:intergenic |
AGGGACATAAGGTGTGGTCT+TGG | 0.432771 | 3_4:-74927551 | Msa0521900:CDS |
CTTTGTCTTCTGCTTCAGAT+GGG | 0.433747 | 3_4:+74928445 | None:intergenic |
ATGCTTTCTAATGTGCCATC+AGG | 0.434547 | 3_4:+74927915 | None:intergenic |
TTGATAATTGCGGGACCCTA+TGG | 0.439721 | 3_4:-74928280 | Msa0521900:CDS |
GATGGTCAACTTGGTCTTAG+TGG | 0.440176 | 3_4:-74928549 | Msa0521900:CDS |
AGATGGATCTGTTTGGTGCT+GGG | 0.441156 | 3_4:-74928702 | Msa0521900:five_prime_UTR |
TACTTTATGGATGGTCAACT+TGG | 0.444329 | 3_4:-74928558 | Msa0521900:CDS |
TGTTGCTCAGGAGGGACATA+AGG | 0.446097 | 3_4:-74927562 | Msa0521900:CDS |
TAAGGTGTGGTCTTGGGGTA+GGG | 0.448746 | 3_4:-74927544 | Msa0521900:CDS |
AGATGGCAGTGTATACTGTT+GGG | 0.451480 | 3_4:-74930419 | Msa0521900:five_prime_UTR |
ATATGTATCCTTAATATGCT+TGG | 0.456338 | 3_4:-74928671 | Msa0521900:five_prime_UTR |
AAGGTGTGGTCTTGGGGTAG+GGG | 0.460092 | 3_4:-74927543 | Msa0521900:CDS |
TACATAGTACTCAGAAAGAT+TGG | 0.460353 | 3_4:+74926915 | None:intergenic |
CTGTGGCCTCCAACAATTGA+GGG | 0.461200 | 3_4:-74927462 | Msa0521900:CDS |
ATGTGCTGGACCTTTGGCCT+TGG | 0.462273 | 3_4:-74927894 | Msa0521900:CDS |
GTGGTCATGGGGAATGGAGA+AGG | 0.462920 | 3_4:-74927730 | Msa0521900:CDS |
GGGGAAGGAGTGGAGTCCTT+GGG | 0.463434 | 3_4:-74927524 | Msa0521900:CDS |
AGGGGAAGGAGTGGAGTCCT+TGG | 0.463472 | 3_4:-74927525 | Msa0521900:CDS |
GGACGTGTGGTCATGGGGAA+TGG | 0.465246 | 3_4:-74927736 | Msa0521900:CDS |
AAATCTACTATGCTACTCTT+GGG | 0.466275 | 3_4:-74928090 | Msa0521900:CDS |
GTCCCGTTAAAGTTGTGTGT+GGG | 0.467611 | 3_4:-74927602 | Msa0521900:CDS |
AAATATGCTAGTATACTTCA+TGG | 0.467821 | 3_4:-74927294 | Msa0521900:CDS |
AAGATGGATCTGTTTGGTGC+TGG | 0.470963 | 3_4:-74928703 | Msa0521900:five_prime_UTR |
AGTGTATACTGTTGGGGTAG+AGG | 0.472628 | 3_4:-74930412 | Msa0521900:five_prime_UTR |
ACATACTGTTGTTGTTGCTC+AGG | 0.475103 | 3_4:-74927574 | Msa0521900:CDS |
ATAAGGTGTGGTCTTGGGGT+AGG | 0.476461 | 3_4:-74927545 | Msa0521900:CDS |
GTTTCAGCACGATTAGCATC+AGG | 0.478375 | 3_4:+74927693 | None:intergenic |
GTCTTCTTGGACAATTTATG+AGG | 0.478940 | 3_4:-74927985 | Msa0521900:CDS |
AATGGATATTGCAAAAGAAT+GGG | 0.480013 | 3_4:-74927208 | Msa0521900:CDS |
AATATGACTACTAATCCTAC+TGG | 0.480827 | 3_4:+74926745 | None:intergenic |
TTACAGAAGATGGATCTGTT+TGG | 0.481912 | 3_4:-74928709 | Msa0521900:intron |
CTTGGTGAGAATGGCCAACT+TGG | 0.484003 | 3_4:-74927876 | Msa0521900:CDS |
AGAATGGGAGAACATGTTAG+AGG | 0.485019 | 3_4:-74927193 | Msa0521900:CDS |
TGTGGTCTTGGGGTAGGGGA+AGG | 0.486035 | 3_4:-74927539 | Msa0521900:CDS |
GGCAATTCTTTAATAGGAGT+GGG | 0.489292 | 3_4:+74927825 | None:intergenic |
TTGAGACCCTCAATTGTTGG+AGG | 0.493550 | 3_4:+74927456 | None:intergenic |
ATGTTTGGACGGCTTGGGAA+TGG | 0.501627 | 3_4:-74930388 | Msa0521900:five_prime_UTR |
TGTGTTCTCGCGGGAGGCAA+TGG | 0.501946 | 3_4:-74930669 | Msa0521900:five_prime_UTR |
GGACATAAGGTGTGGTCTTG+GGG | 0.505598 | 3_4:-74927549 | Msa0521900:CDS |
CAGATGTGTGCTGTCAAAGC+AGG | 0.506084 | 3_4:-74928323 | Msa0521900:CDS |
GATCTTGTGTGATAGCTTGT+CGG | 0.509009 | 3_4:+74930622 | None:intergenic |
TGCTAAGTAAGCAAGGAACT+AGG | 0.509756 | 3_4:+74928505 | None:intergenic |
AGCAAGCAGAGCAGTGTGAA+AGG | 0.513897 | 3_4:+74927950 | None:intergenic |
CACACAACTTTAACGGGACC+CGG | 0.519555 | 3_4:+74927606 | None:intergenic |
ATTACACTCTTATGACTCGT+TGG | 0.520962 | 3_4:-74926893 | Msa0521900:three_prime_UTR |
AAACGAGCATGTCGTAGCTC+TGG | 0.521902 | 3_4:-74928141 | Msa0521900:CDS |
TTTGATTTCAGGAGATTGGT+AGG | 0.522796 | 3_4:-74930702 | Msa0521900:five_prime_UTR |
TGGCAATTCTTTAATAGGAG+TGG | 0.522877 | 3_4:+74927824 | None:intergenic |
AAAATAGTGGGTATTGCTGC+TGG | 0.523385 | 3_4:-74930295 | Msa0521900:five_prime_UTR |
AGGAGTGGAGTCCTTGGGAA+TGG | 0.528552 | 3_4:-74927519 | Msa0521900:CDS |
TCTGTGGCCTCCAACAATTG+AGG | 0.528618 | 3_4:-74927463 | Msa0521900:CDS |
TTTCACACCAACACCAGTCT+GGG | 0.530672 | 3_4:-74928201 | Msa0521900:CDS |
ATCCCACAAGAAAGCAAAGA+AGG | 0.530731 | 3_4:-74928245 | Msa0521900:CDS |
ATTGCGGGACCCTATGGATG+TGG | 0.533116 | 3_4:-74928274 | Msa0521900:CDS |
GAGATGGCAGTGTATACTGT+TGG | 0.536011 | 3_4:-74930420 | Msa0521900:five_prime_UTR |
GTCCTTGACTACTTTATGGA+TGG | 0.536626 | 3_4:-74928567 | Msa0521900:CDS |
GCTAAGTAAGCAAGGAACTA+GGG | 0.538548 | 3_4:+74928506 | None:intergenic |
AGCAGGAGGAATGATGTCTC+TGG | 0.541237 | 3_4:-74928306 | Msa0521900:CDS |
TACTGTTGTTGTTGCTCAGG+AGG | 0.541350 | 3_4:-74927571 | Msa0521900:CDS |
ACTGGGGACGTGTGGTCATG+GGG | 0.542847 | 3_4:-74927741 | Msa0521900:CDS |
CATCTTATTTCTGTTGACTG+TGG | 0.546907 | 3_4:-74927792 | Msa0521900:CDS |
TGATAGGAAGCTAGTTAGGA+TGG | 0.550267 | 3_4:-74927163 | Msa0521900:CDS |
CAAGTGTTGTGTCCTCAACT+GGG | 0.558104 | 3_4:-74927758 | Msa0521900:CDS |
CCATGGCCAATTAGGTTTGG+GGG | 0.558598 | 3_4:-74928057 | Msa0521900:CDS |
GCACATTAGAAAGCATGTGC+TGG | 0.562548 | 3_4:-74927908 | Msa0521900:CDS |
AGAAAGATTGGTCAAGTGAA+GGG | 0.564269 | 3_4:+74926927 | None:intergenic |
CAGAAAGATTGGTCAAGTGA+AGG | 0.566957 | 3_4:+74926926 | None:intergenic |
GATGTTTCCCCACATCCATA+GGG | 0.569483 | 3_4:+74928265 | None:intergenic |
TTGCGGGACCCTATGGATGT+GGG | 0.570217 | 3_4:-74928273 | Msa0521900:CDS |
GATGGATCTGTTTGGTGCTG+GGG | 0.570330 | 3_4:-74928701 | Msa0521900:five_prime_UTR |
GGTCCCGTTAAAGTTGTGTG+TGG | 0.570763 | 3_4:-74927603 | Msa0521900:CDS |
TAACTATGACAGACTCCAGT+AGG | 0.571676 | 3_4:-74926760 | Msa0521900:three_prime_UTR |
TGAAACCTGCTAAGTAAGCA+AGG | 0.571693 | 3_4:+74928498 | None:intergenic |
TAGCTCTGATGAGCAAGATA+AGG | 0.571932 | 3_4:-74927418 | Msa0521900:CDS |
GCCATGGCCAATTAGGTTTG+GGG | 0.572289 | 3_4:-74928058 | Msa0521900:CDS |
GGGGTAGAGGAATGTTTGGA+CGG | 0.573684 | 3_4:-74930399 | Msa0521900:five_prime_UTR |
CTGTTTCTGCTATTATTTCG+GGG | 0.574872 | 3_4:+74927382 | None:intergenic |
GACCATCCATAAAGTAGTCA+AGG | 0.576346 | 3_4:+74928565 | None:intergenic |
TGAGATAAGAAGAGGAGAGA+GGG | 0.576970 | 3_4:+74927653 | None:intergenic |
TGACCACACGTCCCCAGTTG+AGG | 0.577118 | 3_4:+74927746 | None:intergenic |
AAACACAGTGTTAAAATAGT+GGG | 0.577385 | 3_4:-74930307 | Msa0521900:five_prime_UTR |
TGGTCATGGGGAATGGAGAA+GGG | 0.580126 | 3_4:-74927729 | Msa0521900:CDS |
AAATTGCATGAGATAAGAAG+AGG | 0.583358 | 3_4:+74927645 | None:intergenic |
GCCATTCTCACCAAGGCCAA+AGG | 0.583660 | 3_4:+74927884 | None:intergenic |
GCGTTGTTCCGTGTCCAAGT+TGG | 0.584020 | 3_4:+74927862 | None:intergenic |
AAGATCATTGACATCGCCGC+TGG | 0.584854 | 3_4:-74930605 | Msa0521900:five_prime_UTR |
TCACGGTCGAACTGTTGTCA+AGG | 0.586698 | 3_4:-74928174 | Msa0521900:CDS |
ACACTCCCACCATTGTTCTG+TGG | 0.592698 | 3_4:-74927479 | Msa0521900:CDS |
AATTGAGGGTCTCAAAGAAG+AGG | 0.594584 | 3_4:-74927448 | Msa0521900:CDS |
GAAATAAGATGTATGCATTG+TGG | 0.604900 | 3_4:+74927804 | None:intergenic |
ACTGTTGTCAAGGTTTCATG+TGG | 0.605298 | 3_4:-74928164 | Msa0521900:CDS |
CACAAGAAAGCAAAGAAGGT+GGG | 0.607070 | 3_4:-74928241 | Msa0521900:CDS |
CGACCGTGAAAATCCCAGAC+TGG | 0.609935 | 3_4:+74928188 | None:intergenic |
AAGAGTTGTGTTCTCGCGGG+AGG | 0.610476 | 3_4:-74930675 | Msa0521900:five_prime_UTR |
TCCCGTTAAAGTTGTGTGTG+GGG | 0.612591 | 3_4:-74927601 | Msa0521900:CDS |
ACTGTTGTTGTTGCTCAGGA+GGG | 0.615836 | 3_4:-74927570 | Msa0521900:CDS |
TGGAGGCCACAGAACAATGG+TGG | 0.617338 | 3_4:+74927473 | None:intergenic |
TGAAAATCCCAGACTGGTGT+TGG | 0.620193 | 3_4:+74928194 | None:intergenic |
TCTCTGGCTATTGATAATTG+CGG | 0.621157 | 3_4:-74928290 | Msa0521900:CDS |
TGCGGGACCCTATGGATGTG+GGG | 0.621262 | 3_4:-74928272 | Msa0521900:CDS |
CCGAATTCTGCATTGAAACA+GGG | 0.623730 | 3_4:+74927235 | None:intergenic |
CGGGAGGCAATGGAAGACGC+CGG | 0.624501 | 3_4:-74930659 | Msa0521900:five_prime_UTR |
TCACACCAGTTAGCATGTCA+CGG | 0.624713 | 3_4:+74927130 | None:intergenic |
GAGAATGGCCAACTTGGACA+CGG | 0.624737 | 3_4:-74927870 | Msa0521900:CDS |
CGTTAAAGTTGTGTGTGGGG+CGG | 0.625152 | 3_4:-74927598 | Msa0521900:CDS |
CTTCAGCTCATTCAACGCCG+TGG | 0.629100 | 3_4:+74927347 | None:intergenic |
GGAGGCCACAGAACAATGGT+GGG | 0.639775 | 3_4:+74927474 | None:intergenic |
TCTTGGGGTTATAACAGCCA+TGG | 0.641426 | 3_4:-74928074 | Msa0521900:CDS |
CTCAGGAGGGACATAAGGTG+TGG | 0.642472 | 3_4:-74927557 | Msa0521900:CDS |
TGTCCTCAACTGGGGACGTG+TGG | 0.643009 | 3_4:-74927749 | Msa0521900:CDS |
CCACAAGAAAGCAAAGAAGG+TGG | 0.643526 | 3_4:-74928242 | Msa0521900:CDS |
GATGGCAGTGTATACTGTTG+GGG | 0.643574 | 3_4:-74930418 | Msa0521900:five_prime_UTR |
ACTTGGTCTTAGTGGAGAGG+AGG | 0.646664 | 3_4:-74928541 | Msa0521900:CDS |
GGAGTGTCTCCAATCTTCAG+AGG | 0.648510 | 3_4:-74927067 | Msa0521900:CDS |
AATCTACTATGCTACTCTTG+GGG | 0.649210 | 3_4:-74928089 | Msa0521900:CDS |
TGTTGGAGGCCACAGAACAA+TGG | 0.649818 | 3_4:+74927470 | None:intergenic |
ATGAGATAAGAAGAGGAGAG+AGG | 0.650101 | 3_4:+74927652 | None:intergenic |
AACAGATGAGAAATTATCCA+CGG | 0.650270 | 3_4:-74927364 | Msa0521900:CDS |
TCTGATGAGCAAGATAAGGT+CGG | 0.653106 | 3_4:-74927414 | Msa0521900:CDS |
ATGTGTGCTGTCAAAGCAGG+AGG | 0.655247 | 3_4:-74928320 | Msa0521900:CDS |
TCAACTTGGTCTTAGTGGAG+AGG | 0.660827 | 3_4:-74928544 | Msa0521900:CDS |
CAAGTTGGCCATTCTCACCA+AGG | 0.682599 | 3_4:+74927877 | None:intergenic |
AAGTGTTGTGTCCTCAACTG+GGG | 0.685919 | 3_4:-74927757 | Msa0521900:CDS |
AAGAGTGTGTGATTCACCAG+CGG | 0.708326 | 3_4:+74930589 | None:intergenic |
CGTGCTGAAACAAATTCTGG+TGG | 0.714600 | 3_4:-74927681 | Msa0521900:CDS |
GGGTCTGTTGAAGAATTGGG+CGG | 0.724602 | 3_4:+74928465 | None:intergenic |
TCTTGTGTGATAGCTTGTCG+GGG | 0.725382 | 3_4:+74930624 | None:intergenic |
ACAATTTATGAGGTAGCATG+TGG | 0.737032 | 3_4:-74927975 | Msa0521900:CDS |
TAGTGCTATAGACTCACACG+AGG | 0.791535 | 3_4:-74928117 | Msa0521900:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAAAAAAATAAAAAATTT+TGG | - | chr3_4:74928269-74928288 | Msa0521900:CDS | 0.0% |
!!! | TTTAAAATAGTAAGATTTTA+TGG | + | chr3_4:74927865-74927884 | None:intergenic | 10.0% |
!!! | ACTTTAAAAAAAATAGATTT+TGG | - | chr3_4:74928028-74928047 | Msa0521900:CDS | 10.0% |
!!! | CTTTAAAAAAAATAGATTTT+GGG | - | chr3_4:74928029-74928048 | Msa0521900:CDS | 10.0% |
!!! | ATGTATTTTTTTTAACAAAA+TGG | - | chr3_4:74928218-74928237 | Msa0521900:CDS | 10.0% |
!! | AGAAAAAGGTAAATAAAATT+GGG | + | chr3_4:74926835-74926854 | None:intergenic | 15.0% |
!! | TAAACAACGTTATTAAATAT+CGG | + | chr3_4:74927455-74927474 | None:intergenic | 15.0% |
!!! | ATGTGATTAATTTCTTTTTT+TGG | + | chr3_4:74927785-74927804 | None:intergenic | 15.0% |
!! | ATAGGTTATGTTAATATTAA+GGG | + | chr3_4:74927924-74927943 | None:intergenic | 15.0% |
!! | TATAGGTTATGTTAATATTA+AGG | + | chr3_4:74927925-74927944 | None:intergenic | 15.0% |
!! | TTCTATGAAAATAAGATAAA+AGG | - | chr3_4:74928367-74928386 | Msa0521900:intron | 15.0% |
!! | TCTATGAAAATAAGATAAAA+GGG | - | chr3_4:74928368-74928387 | Msa0521900:intron | 15.0% |
!! | AAAGATCAAAGAAATTATAA+AGG | - | chr3_4:74930296-74930315 | Msa0521900:five_prime_UTR | 15.0% |
!!! | TCATTTTCAAAGATAAAAAA+GGG | - | chr3_4:74930551-74930570 | Msa0521900:intron | 15.0% |
!! | GAGAAAAAGGTAAATAAAAT+TGG | + | chr3_4:74926836-74926855 | None:intergenic | 20.0% |
!! | GTAAATTGAAAGAGAAAATT+AGG | + | chr3_4:74927163-74927182 | None:intergenic | 20.0% |
!! | ACTATATCTAATAAATTGGA+TGG | + | chr3_4:74927257-74927276 | None:intergenic | 20.0% |
!! | TCCAATTTATTAGATATAGT+TGG | - | chr3_4:74927257-74927276 | Msa0521900:CDS | 20.0% |
!! | TCCAACTATATCTAATAAAT+TGG | + | chr3_4:74927261-74927280 | None:intergenic | 20.0% |
!! | TTCAAATAATCAAACTTTGT+TGG | - | chr3_4:74927609-74927628 | Msa0521900:CDS | 20.0% |
!! | TCAAATAATCAAACTTTGTT+GGG | - | chr3_4:74927610-74927629 | Msa0521900:CDS | 20.0% |
!! | TATGTTAATATTAAGGGAAA+TGG | + | chr3_4:74927918-74927937 | None:intergenic | 20.0% |
!! | TACTTGATAAAAAAGGTTAT+AGG | + | chr3_4:74927942-74927961 | None:intergenic | 20.0% |
!!! | TAACCTTTTTTATCAAGTAT+TGG | - | chr3_4:74927943-74927962 | Msa0521900:CDS | 20.0% |
!! | ATAACCAATAATAATAAGCT+GGG | + | chr3_4:74927974-74927993 | None:intergenic | 20.0% |
!! | TATAACCAATAATAATAAGC+TGG | + | chr3_4:74927975-74927994 | None:intergenic | 20.0% |
!!! | TATATTTTAACAACTAACTG+AGG | - | chr3_4:74927991-74928010 | Msa0521900:CDS | 20.0% |
!!! | ATATTTTAACAACTAACTGA+GGG | - | chr3_4:74927992-74928011 | Msa0521900:CDS | 20.0% |
!!! | AAAATAGATTTTGGGTTAAA+AGG | - | chr3_4:74928037-74928056 | Msa0521900:CDS | 20.0% |
!!! | AATCTCTAAAAAACAGAAAT+AGG | + | chr3_4:74928124-74928143 | None:intergenic | 20.0% |
!!! | TTTCTGTTTTTTAGAGATTT+TGG | - | chr3_4:74928125-74928144 | Msa0521900:CDS | 20.0% |
!!! | TTCTGTTTTTTAGAGATTTT+GGG | - | chr3_4:74928126-74928145 | Msa0521900:CDS | 20.0% |
!! | CTATGAAAATAAGATAAAAG+GGG | - | chr3_4:74928369-74928388 | Msa0521900:intron | 20.0% |
!! | CATAATGAGGTTAATAAATA+TGG | + | chr3_4:74928602-74928621 | None:intergenic | 20.0% |
!! | AAACACAAATAGAATTAGAT+GGG | + | chr3_4:74928655-74928674 | None:intergenic | 20.0% |
!! | AAAACACAAATAGAATTAGA+TGG | + | chr3_4:74928656-74928675 | None:intergenic | 20.0% |
!!! | GTCATTTTCAAAGATAAAAA+AGG | - | chr3_4:74930550-74930569 | Msa0521900:intron | 20.0% |
!!! | GTTTTTGTATTTGATTAATC+AGG | - | chr3_4:74930682-74930701 | Msa0521900:five_prime_UTR | 20.0% |
! | GTATATTCAGATTGAGAAAA+AGG | + | chr3_4:74926849-74926868 | None:intergenic | 25.0% |
! | ATCTGAATATACAAAAAACG+TGG | - | chr3_4:74926857-74926876 | Msa0521900:three_prime_UTR | 25.0% |
!! | ATGAATCTTATCATTGATTG+AGG | - | chr3_4:74926925-74926944 | Msa0521900:three_prime_UTR | 25.0% |
!! | TGAATCTTATCATTGATTGA+GGG | - | chr3_4:74926926-74926945 | Msa0521900:three_prime_UTR | 25.0% |
! | TAAACACAGTGTTAAAATAG+TGG | - | chr3_4:74927076-74927095 | Msa0521900:CDS | 25.0% |
! | AAACACAGTGTTAAAATAGT+GGG | - | chr3_4:74927077-74927096 | Msa0521900:CDS | 25.0% |
! | ATTGAAAGAGAAAATTAGGA+AGG | + | chr3_4:74927159-74927178 | None:intergenic | 25.0% |
! | ATGAAAATAAAAATTGCAGC+TGG | + | chr3_4:74927206-74927225 | None:intergenic | 25.0% |
! | ATCAAATTCTGATATGCTAT+AGG | - | chr3_4:74927403-74927422 | Msa0521900:CDS | 25.0% |
! | ACGTTGTTTAATTGTGTTAA+AGG | - | chr3_4:74927465-74927484 | Msa0521900:CDS | 25.0% |
!! | AAGTTGATTATAATCAGTGT+AGG | + | chr3_4:74927573-74927592 | None:intergenic | 25.0% |
! | TAACCAATAATAATAAGCTG+GGG | + | chr3_4:74927973-74927992 | None:intergenic | 25.0% |
!!! | TTTAGAGATTTTGGGTTAAA+AGG | - | chr3_4:74928134-74928153 | Msa0521900:CDS | 25.0% |
!!! | TTGTTTTTAGAAAAGCTACT+TGG | - | chr3_4:74928169-74928188 | Msa0521900:CDS | 25.0% |
! | TATCAAGAATTACACAACTT+CGG | + | chr3_4:74928578-74928597 | None:intergenic | 25.0% |
!!! | AATATGCTGGTTCATTTATT+TGG | - | chr3_4:74928625-74928644 | Msa0521900:five_prime_UTR | 25.0% |
! | AACACAAATAGAATTAGATG+GGG | + | chr3_4:74928654-74928673 | None:intergenic | 25.0% |
!!! | ATTTGTGTTTTTACAGAAGA+TGG | - | chr3_4:74928665-74928684 | Msa0521900:five_prime_UTR | 25.0% |
! | ATATGTATCCTTAATATGCT+TGG | - | chr3_4:74928713-74928732 | Msa0521900:intron | 25.0% |
!!! | GTTTTAAAACTTATATGCCA+AGG | - | chr3_4:74928998-74929017 | Msa0521900:intron | 25.0% |
!!! | TCAAGTATTTTTACAACTTC+TGG | + | chr3_4:74929373-74929392 | None:intergenic | 25.0% |
!!! | ATCTGTTTCTGCTATTATTT+CGG | + | chr3_4:74930007-74930026 | None:intergenic | 25.0% |
! | TCAAACAAAGCTATCTATAA+TGG | - | chr3_4:74930065-74930084 | Msa0521900:intron | 25.0% |
! | AAATATGCTAGTATACTTCA+TGG | - | chr3_4:74930090-74930109 | Msa0521900:intron | 25.0% |
!! | ATACTTCATGGTTCAATTTT+TGG | - | chr3_4:74930102-74930121 | Msa0521900:intron | 25.0% |
! | AATGGATATTGCAAAAGAAT+GGG | - | chr3_4:74930176-74930195 | Msa0521900:intron | 25.0% |
!! | ATTTATTTACCTCTGAAGAT+TGG | + | chr3_4:74930329-74930348 | None:intergenic | 25.0% |
!!! | TTCCAAAGTTGAGCTTTTTT+GGG | + | chr3_4:74927043-74927062 | None:intergenic | 30.0% |
!!! | TTTCCAAAGTTGAGCTTTTT+TGG | + | chr3_4:74927044-74927063 | None:intergenic | 30.0% |
! | ACACTGTGTTTAGTTTCATT+AGG | + | chr3_4:74927068-74927087 | None:intergenic | 30.0% |
TTCTTGTTGCATAAACGATA+CGG | - | chr3_4:74927225-74927244 | Msa0521900:CDS | 30.0% | |
TTATTAAATATCGGCCATAG+CGG | + | chr3_4:74927446-74927465 | None:intergenic | 30.0% | |
CTGCCAATACTTGATAAAAA+AGG | + | chr3_4:74927949-74927968 | None:intergenic | 30.0% | |
!! | AATCAGAAGCTATTTCTGTT+TGG | - | chr3_4:74928092-74928111 | Msa0521900:CDS | 30.0% |
TTAAAAAATCCCAGACAAAC+AGG | - | chr3_4:74928292-74928311 | Msa0521900:CDS | 30.0% | |
!! | AATGCTTCTAAGGATACTTT+TGG | - | chr3_4:74928321-74928340 | Msa0521900:CDS | 30.0% |
CCAGCATATTAATCATAATG+AGG | + | chr3_4:74928615-74928634 | None:intergenic | 30.0% | |
CCTCATTATGATTAATATGC+TGG | - | chr3_4:74928612-74928631 | Msa0521900:exon | 30.0% | |
AAAAGACTCCAAGCATATTA+AGG | + | chr3_4:74928724-74928743 | None:intergenic | 30.0% | |
! | AGAAGACAAAGCATCAATAA+AGG | - | chr3_4:74928951-74928970 | Msa0521900:intron | 30.0% |
AAAATCTACTATGCTACTCT+TGG | - | chr3_4:74929293-74929312 | Msa0521900:intron | 30.0% | |
AAATCTACTATGCTACTCTT+GGG | - | chr3_4:74929294-74929313 | Msa0521900:intron | 30.0% | |
AGTTGTAAAAATACTTGACG+AGG | - | chr3_4:74929375-74929394 | Msa0521900:intron | 30.0% | |
CATTGTGGCAATTCTTTAAT+AGG | + | chr3_4:74929568-74929587 | None:intergenic | 30.0% | |
GAAATAAGATGTATGCATTG+TGG | + | chr3_4:74929583-74929602 | None:intergenic | 30.0% | |
AAATTGCATGAGATAAGAAG+AGG | + | chr3_4:74929742-74929761 | None:intergenic | 30.0% | |
!! | TTTACATCAACCCATTTTTC+CGG | - | chr3_4:74929759-74929778 | Msa0521900:intron | 30.0% |
!! | TCTGTTTCTGCTATTATTTC+GGG | + | chr3_4:74930006-74930025 | None:intergenic | 30.0% |
AACAGATGAGAAATTATCCA+CGG | - | chr3_4:74930020-74930039 | Msa0521900:intron | 30.0% | |
CAATGGATATTGCAAAAGAA+TGG | - | chr3_4:74930175-74930194 | Msa0521900:intron | 30.0% | |
TACATAGTACTCAGAAAGAT+TGG | + | chr3_4:74930472-74930491 | None:intergenic | 30.0% | |
AATATGACTACTAATCCTAC+TGG | + | chr3_4:74930642-74930661 | None:intergenic | 30.0% | |
! | TTGAGGGTTCAATTTTGTGT+AGG | - | chr3_4:74926942-74926961 | Msa0521900:three_prime_UTR | 35.0% |
! | GTTCAATTTTGTGTAGGAGA+TGG | - | chr3_4:74926948-74926967 | Msa0521900:three_prime_UTR | 35.0% |
TTCCCAAAAAAGCTCAACTT+TGG | - | chr3_4:74927038-74927057 | Msa0521900:exon | 35.0% | |
ATAAAAATTGCAGCTGGATG+AGG | + | chr3_4:74927200-74927219 | None:intergenic | 35.0% | |
TACAAAATGTTGTCAAGCAG+TGG | + | chr3_4:74927360-74927379 | None:intergenic | 35.0% | |
CTATGATAGAGCCCATATTA+GGG | - | chr3_4:74927720-74927739 | Msa0521900:CDS | 35.0% | |
!! | AAACTCTTAAAGAGTGCCTA+AGG | - | chr3_4:74927882-74927901 | Msa0521900:CDS | 35.0% |
!! | AACTCTTAAAGAGTGCCTAA+GGG | - | chr3_4:74927883-74927902 | Msa0521900:CDS | 35.0% |
AGACCCCAGCTTATTATTAT+TGG | - | chr3_4:74927967-74927986 | Msa0521900:CDS | 35.0% | |
! | TGGAACAGCTTTTCATTTTG+AGG | - | chr3_4:74928189-74928208 | Msa0521900:CDS | 35.0% |
!! | GTATCCTTAGAAGCATTTCA+GGG | + | chr3_4:74928318-74928337 | None:intergenic | 35.0% |
!! | AGTATCCTTAGAAGCATTTC+AGG | + | chr3_4:74928319-74928338 | None:intergenic | 35.0% |
!!! | TGAATGTCATTTTCCCTTGA+TGG | - | chr3_4:74928543-74928562 | Msa0521900:CDS | 35.0% |
TTACAGAAGATGGATCTGTT+TGG | - | chr3_4:74928675-74928694 | Msa0521900:five_prime_UTR | 35.0% | |
TACTTTATGGATGGTCAACT+TGG | - | chr3_4:74928826-74928845 | Msa0521900:intron | 35.0% | |
! | TCTCTGGCTATTGATAATTG+CGG | - | chr3_4:74929094-74929113 | Msa0521900:intron | 35.0% |
AATCTACTATGCTACTCTTG+GGG | - | chr3_4:74929295-74929314 | Msa0521900:intron | 35.0% | |
GTCTTCTTGGACAATTTATG+AGG | - | chr3_4:74929399-74929418 | Msa0521900:intron | 35.0% | |
ACAATTTATGAGGTAGCATG+TGG | - | chr3_4:74929409-74929428 | Msa0521900:intron | 35.0% | |
GGCAATTCTTTAATAGGAGT+GGG | + | chr3_4:74929562-74929581 | None:intergenic | 35.0% | |
TGGCAATTCTTTAATAGGAG+TGG | + | chr3_4:74929563-74929582 | None:intergenic | 35.0% | |
!! | CATCTTATTTCTGTTGACTG+TGG | - | chr3_4:74929592-74929611 | Msa0521900:intron | 35.0% |
AATCGTGCTGAAACAAATTC+TGG | - | chr3_4:74929700-74929719 | Msa0521900:intron | 35.0% | |
!! | TTACATCAACCCATTTTTCC+GGG | - | chr3_4:74929760-74929779 | Msa0521900:intron | 35.0% |
!! | CTGTTTCTGCTATTATTTCG+GGG | + | chr3_4:74930005-74930024 | None:intergenic | 35.0% |
GGGATATCTTGCTCATTAAA+AGG | + | chr3_4:74930132-74930151 | None:intergenic | 35.0% | |
! | ATCGTTCCATTTTGCTTAGA+TGG | - | chr3_4:74930421-74930440 | Msa0521900:five_prime_UTR | 35.0% |
! | AGAAAGATTGGTCAAGTGAA+GGG | + | chr3_4:74930460-74930479 | None:intergenic | 35.0% |
ATTACACTCTTATGACTCGT+TGG | - | chr3_4:74930491-74930510 | Msa0521900:intron | 35.0% | |
CAAAAAGAGTTGTGTTCTCG+CGG | - | chr3_4:74926705-74926724 | Msa0521900:three_prime_UTR | 40.0% | |
AAAAAGAGTTGTGTTCTCGC+GGG | - | chr3_4:74926706-74926725 | Msa0521900:three_prime_UTR | 40.0% | |
! | ATCTTGTGTGATAGCTTGTC+GGG | + | chr3_4:74926764-74926783 | None:intergenic | 40.0% |
! | GATCTTGTGTGATAGCTTGT+CGG | + | chr3_4:74926765-74926784 | None:intergenic | 40.0% |
TCACACACTCTTCTTCTTAC+TGG | - | chr3_4:74926806-74926825 | Msa0521900:three_prime_UTR | 40.0% | |
AGATGGCAGTGTATACTGTT+GGG | - | chr3_4:74926965-74926984 | Msa0521900:three_prime_UTR | 40.0% | |
!! | AAAATAGTGGGTATTGCTGC+TGG | - | chr3_4:74927089-74927108 | Msa0521900:CDS | 40.0% |
! | TATCATAGTCTTGCTCTTGC+AGG | - | chr3_4:74927116-74927135 | Msa0521900:CDS | 40.0% |
ATCATGCTTCTCAACAGACA+AGG | - | chr3_4:74927637-74927656 | Msa0521900:CDS | 40.0% | |
CCTAATATGGGCTCTATCAT+AGG | + | chr3_4:74927722-74927741 | None:intergenic | 40.0% | |
CCTATGATAGAGCCCATATT+AGG | - | chr3_4:74927719-74927738 | Msa0521900:CDS | 40.0% | |
CGTTAGCAAGACCCTAATAT+GGG | + | chr3_4:74927734-74927753 | None:intergenic | 40.0% | |
TCGTTAGCAAGACCCTAATA+TGG | + | chr3_4:74927735-74927754 | None:intergenic | 40.0% | |
!! | ATCCTTAAAGAGTGCCCTAA+GGG | + | chr3_4:74927761-74927780 | None:intergenic | 40.0% |
!! | AATCCTTAAAGAGTGCCCTA+AGG | + | chr3_4:74927762-74927781 | None:intergenic | 40.0% |
!!! | TCTAAGGATACTTTTGGAGC+AGG | - | chr3_4:74928327-74928346 | Msa0521900:intron | 40.0% |
CACAAGTGCAATGAAGTGAA+TGG | - | chr3_4:74928445-74928464 | Msa0521900:CDS | 40.0% | |
! | AGACTTTGATAACCAGAGAG+AGG | - | chr3_4:74928516-74928535 | Msa0521900:CDS | 40.0% |
! | GACTTTGATAACCAGAGAGA+GGG | - | chr3_4:74928517-74928536 | Msa0521900:CDS | 40.0% |
CTGTGTCCTTGACTACTTTA+TGG | - | chr3_4:74928813-74928832 | Msa0521900:intron | 40.0% | |
GTCCTTGACTACTTTATGGA+TGG | - | chr3_4:74928817-74928836 | Msa0521900:intron | 40.0% | |
GACCATCCATAAAGTAGTCA+AGG | + | chr3_4:74928822-74928841 | None:intergenic | 40.0% | |
GCTAAGTAAGCAAGGAACTA+GGG | + | chr3_4:74928881-74928900 | None:intergenic | 40.0% | |
TGCTAAGTAAGCAAGGAACT+AGG | + | chr3_4:74928882-74928901 | None:intergenic | 40.0% | |
TAGTTCCTTGCTTACTTAGC+AGG | - | chr3_4:74928881-74928900 | Msa0521900:intron | 40.0% | |
TGAAACCTGCTAAGTAAGCA+AGG | + | chr3_4:74928889-74928908 | None:intergenic | 40.0% | |
GATGGGTCTGTTGAAGAATT+GGG | + | chr3_4:74928925-74928944 | None:intergenic | 40.0% | |
AGATGGGTCTGTTGAAGAAT+TGG | + | chr3_4:74928926-74928945 | None:intergenic | 40.0% | |
CTTTGTCTTCTGCTTCAGAT+GGG | + | chr3_4:74928942-74928961 | None:intergenic | 40.0% | |
! | CTCTGGCTATTGATAATTGC+GGG | - | chr3_4:74929095-74929114 | Msa0521900:intron | 40.0% |
ATCCCACAAGAAAGCAAAGA+AGG | - | chr3_4:74929139-74929158 | Msa0521900:intron | 40.0% | |
CACCTTCTTTGCTTTCTTGT+GGG | + | chr3_4:74929144-74929163 | None:intergenic | 40.0% | |
CACAAGAAAGCAAAGAAGGT+GGG | - | chr3_4:74929143-74929162 | Msa0521900:intron | 40.0% | |
ACTGTTGTCAAGGTTTCATG+TGG | - | chr3_4:74929220-74929239 | Msa0521900:intron | 40.0% | |
TATAACAGCCATGGCCAATT+AGG | - | chr3_4:74929319-74929338 | Msa0521900:intron | 40.0% | |
GCTCACAAAAAGAAACCTGA+TGG | - | chr3_4:74929454-74929473 | Msa0521900:intron | 40.0% | |
ATGCTTTCTAATGTGCCATC+AGG | + | chr3_4:74929472-74929491 | None:intergenic | 40.0% | |
TGAGATAAGAAGAGGAGAGA+GGG | + | chr3_4:74929734-74929753 | None:intergenic | 40.0% | |
ATGAGATAAGAAGAGGAGAG+AGG | + | chr3_4:74929735-74929754 | None:intergenic | 40.0% | |
! | ACATACTGTTGTTGTTGCTC+AGG | - | chr3_4:74929810-74929829 | Msa0521900:intron | 40.0% |
! | CCATTTCTTTTCCATTCCCA+AGG | + | chr3_4:74929879-74929898 | None:intergenic | 40.0% |
CCTTGGGAATGGAAAAGAAA+TGG | - | chr3_4:74929876-74929895 | Msa0521900:intron | 40.0% | |
!! | TCTTTGAGACCCTCAATTGT+TGG | + | chr3_4:74929934-74929953 | None:intergenic | 40.0% |
AATTGAGGGTCTCAAAGAAG+AGG | - | chr3_4:74929936-74929955 | Msa0521900:intron | 40.0% | |
!! | TAGCTCTGATGAGCAAGATA+AGG | - | chr3_4:74929966-74929985 | Msa0521900:intron | 40.0% |
TCTGATGAGCAAGATAAGGT+CGG | - | chr3_4:74929970-74929989 | Msa0521900:intron | 40.0% | |
CCGAATTCTGCATTGAAACA+GGG | + | chr3_4:74930152-74930171 | None:intergenic | 40.0% | |
CCCTGTTTCAATGCAGAATT+CGG | - | chr3_4:74930149-74930168 | Msa0521900:intron | 40.0% | |
CCTGTTTCAATGCAGAATTC+GGG | - | chr3_4:74930150-74930169 | Msa0521900:intron | 40.0% | |
! | AATGCAGAATTCGGGTTCAA+TGG | - | chr3_4:74930158-74930177 | Msa0521900:intron | 40.0% |
AGAATGGGAGAACATGTTAG+AGG | - | chr3_4:74930191-74930210 | Msa0521900:intron | 40.0% | |
CAGATGATAGGAAGCTAGTT+AGG | - | chr3_4:74930217-74930236 | Msa0521900:intron | 40.0% | |
TGATAGGAAGCTAGTTAGGA+TGG | - | chr3_4:74930221-74930240 | Msa0521900:intron | 40.0% | |
! | TTTTACCGTGACATGCTAAC+TGG | - | chr3_4:74930249-74930268 | Msa0521900:intron | 40.0% |
AGCAGACCATCTAAGCAAAA+TGG | + | chr3_4:74930430-74930449 | None:intergenic | 40.0% | |
! | CAGAAAGATTGGTCAAGTGA+AGG | + | chr3_4:74930461-74930480 | None:intergenic | 40.0% |
TAACTATGACAGACTCCAGT+AGG | - | chr3_4:74930624-74930643 | Msa0521900:five_prime_UTR | 40.0% | |
! | TCTTGTGTGATAGCTTGTCG+GGG | + | chr3_4:74926763-74926782 | None:intergenic | 45.0% |
! | AAGAGTGTGTGATTCACCAG+CGG | + | chr3_4:74926798-74926817 | None:intergenic | 45.0% |
CTCTGCAAATATGCAGTGTG+AGG | + | chr3_4:74926892-74926911 | None:intergenic | 45.0% | |
GAGATGGCAGTGTATACTGT+TGG | - | chr3_4:74926964-74926983 | Msa0521900:three_prime_UTR | 45.0% | |
GATGGCAGTGTATACTGTTG+GGG | - | chr3_4:74926966-74926985 | Msa0521900:three_prime_UTR | 45.0% | |
AGTGTATACTGTTGGGGTAG+AGG | - | chr3_4:74926972-74926991 | Msa0521900:three_prime_UTR | 45.0% | |
TGTTGGGGTAGAGGAATGTT+TGG | - | chr3_4:74926981-74927000 | Msa0521900:three_prime_UTR | 45.0% | |
TCTTGCTAACGAGTTCCCTT+AGG | - | chr3_4:74927743-74927762 | Msa0521900:CDS | 45.0% | |
CTTGCTAACGAGTTCCCTTA+GGG | - | chr3_4:74927744-74927763 | Msa0521900:CDS | 45.0% | |
! | TTCCCTTAGGGCACTCTTTA+AGG | - | chr3_4:74927756-74927775 | Msa0521900:CDS | 45.0% |
! | AAATGGTAACGAGTGCCCTT+AGG | + | chr3_4:74927901-74927920 | None:intergenic | 45.0% |
ATTTCAGGGCCTGTTTGTCT+GGG | + | chr3_4:74928304-74928323 | None:intergenic | 45.0% | |
!!! | GGATACTTTTGGAGCAGGAA+TGG | - | chr3_4:74928332-74928351 | Msa0521900:intron | 45.0% |
!!! | TACTTTTGGAGCAGGAATGG+TGG | - | chr3_4:74928335-74928354 | Msa0521900:intron | 45.0% |
GACATTCAAATCCCTCTCTC+TGG | + | chr3_4:74928531-74928550 | None:intergenic | 45.0% | |
! | TCGGCTTGAGTTACCATCAA+GGG | + | chr3_4:74928559-74928578 | None:intergenic | 45.0% |
! | TTCGGCTTGAGTTACCATCA+AGG | + | chr3_4:74928560-74928579 | None:intergenic | 45.0% |
!! | AAGATGGATCTGTTTGGTGC+TGG | - | chr3_4:74928681-74928700 | Msa0521900:five_prime_UTR | 45.0% |
!! | AGATGGATCTGTTTGGTGCT+GGG | - | chr3_4:74928682-74928701 | Msa0521900:five_prime_UTR | 45.0% |
!! | GATGGTCAACTTGGTCTTAG+TGG | - | chr3_4:74928835-74928854 | Msa0521900:intron | 45.0% |
!! | TCAACTTGGTCTTAGTGGAG+AGG | - | chr3_4:74928840-74928859 | Msa0521900:intron | 45.0% |
GCTTTGTCTTCTGCTTCAGA+TGG | + | chr3_4:74928943-74928962 | None:intergenic | 45.0% | |
! | TTGATAATTGCGGGACCCTA+TGG | - | chr3_4:74929104-74929123 | Msa0521900:intron | 45.0% |
GATGTTTCCCCACATCCATA+GGG | + | chr3_4:74929122-74929141 | None:intergenic | 45.0% | |
CCACCTTCTTTGCTTTCTTG+TGG | + | chr3_4:74929145-74929164 | None:intergenic | 45.0% | |
CCACAAGAAAGCAAAGAAGG+TGG | - | chr3_4:74929142-74929161 | Msa0521900:intron | 45.0% | |
TTTCACACCAACACCAGTCT+GGG | - | chr3_4:74929183-74929202 | Msa0521900:intron | 45.0% | |
TGAAAATCCCAGACTGGTGT+TGG | + | chr3_4:74929193-74929212 | None:intergenic | 45.0% | |
!! | ACACCAGTCTGGGATTTTCA+CGG | - | chr3_4:74929193-74929212 | Msa0521900:intron | 45.0% |
TAGTGCTATAGACTCACACG+AGG | - | chr3_4:74929267-74929286 | Msa0521900:intron | 45.0% | |
TCTTGGGGTTATAACAGCCA+TGG | - | chr3_4:74929310-74929329 | Msa0521900:intron | 45.0% | |
AGCCATGGCCAATTAGGTTT+GGG | - | chr3_4:74929325-74929344 | Msa0521900:intron | 45.0% | |
TACTTGACGAGGAGTCTTCT+TGG | - | chr3_4:74929386-74929405 | Msa0521900:intron | 45.0% | |
! | GCACATTAGAAAGCATGTGC+TGG | - | chr3_4:74929476-74929495 | Msa0521900:intron | 45.0% |
! | ACAAGTGTTGTGTCCTCAAC+TGG | - | chr3_4:74929625-74929644 | Msa0521900:intron | 45.0% |
! | CAAGTGTTGTGTCCTCAACT+GGG | - | chr3_4:74929626-74929645 | Msa0521900:intron | 45.0% |
! | AAGTGTTGTGTCCTCAACTG+GGG | - | chr3_4:74929627-74929646 | Msa0521900:intron | 45.0% |
GTTTCAGCACGATTAGCATC+AGG | + | chr3_4:74929694-74929713 | None:intergenic | 45.0% | |
CGTGCTGAAACAAATTCTGG+TGG | - | chr3_4:74929703-74929722 | Msa0521900:intron | 45.0% | |
TTAACGGGACCCGGAAAAAT+GGG | + | chr3_4:74929772-74929791 | None:intergenic | 45.0% | |
TTTAACGGGACCCGGAAAAA+TGG | + | chr3_4:74929773-74929792 | None:intergenic | 45.0% | |
GTCCCGTTAAAGTTGTGTGT+GGG | - | chr3_4:74929782-74929801 | Msa0521900:intron | 45.0% | |
TCCCGTTAAAGTTGTGTGTG+GGG | - | chr3_4:74929783-74929802 | Msa0521900:intron | 45.0% | |
! | TACTGTTGTTGTTGCTCAGG+AGG | - | chr3_4:74929813-74929832 | Msa0521900:intron | 45.0% |
! | ACTGTTGTTGTTGCTCAGGA+GGG | - | chr3_4:74929814-74929833 | Msa0521900:intron | 45.0% |
TTGAGACCCTCAATTGTTGG+AGG | + | chr3_4:74929931-74929950 | None:intergenic | 45.0% | |
CCCGAATTCTGCATTGAAAC+AGG | + | chr3_4:74930153-74930172 | None:intergenic | 45.0% | |
TGTTAGAGGCAGCAGATGAT+AGG | - | chr3_4:74930205-74930224 | Msa0521900:intron | 45.0% | |
TCACACCAGTTAGCATGTCA+CGG | + | chr3_4:74930257-74930276 | None:intergenic | 45.0% | |
! | TGTGATAGCTTGTCGGGGTT+CGG | + | chr3_4:74926758-74926777 | None:intergenic | 50.0% |
AAGATCATTGACATCGCCGC+TGG | - | chr3_4:74926779-74926798 | Msa0521900:three_prime_UTR | 50.0% | |
GGGGTAGAGGAATGTTTGGA+CGG | - | chr3_4:74926985-74927004 | Msa0521900:three_prime_UTR | 50.0% | |
AGAGGAATGTTTGGACGGCT+TGG | - | chr3_4:74926990-74927009 | Msa0521900:three_prime_UTR | 50.0% | |
GAGGAATGTTTGGACGGCTT+GGG | - | chr3_4:74926991-74927010 | Msa0521900:three_prime_UTR | 50.0% | |
! | ATGTTTGGACGGCTTGGGAA+TGG | - | chr3_4:74926996-74927015 | Msa0521900:three_prime_UTR | 50.0% |
GCTATAGGCCTATAGCGCTA+TGG | - | chr3_4:74927418-74927437 | Msa0521900:CDS | 50.0% | |
CATTTCAGGGCCTGTTTGTC+TGG | + | chr3_4:74928305-74928324 | None:intergenic | 50.0% | |
CAGGCCCTGAAATGCTTCTA+AGG | - | chr3_4:74928311-74928330 | Msa0521900:CDS | 50.0% | |
!! | GATGGATCTGTTTGGTGCTG+GGG | - | chr3_4:74928683-74928702 | Msa0521900:five_prime_UTR | 50.0% |
!! | ACTTGGTCTTAGTGGAGAGG+AGG | - | chr3_4:74928843-74928862 | Msa0521900:intron | 50.0% |
GGGTCTGTTGAAGAATTGGG+CGG | + | chr3_4:74928922-74928941 | None:intergenic | 50.0% | |
CCTTAACAACGCAGTCACCT+TGG | + | chr3_4:74929018-74929037 | None:intergenic | 50.0% | |
CCAAGGTGACTGCGTTGTTA+AGG | - | chr3_4:74929015-74929034 | Msa0521900:intron | 50.0% | |
CAGATGTGTGCTGTCAAAGC+AGG | - | chr3_4:74929061-74929080 | Msa0521900:intron | 50.0% | |
ATGTGTGCTGTCAAAGCAGG+AGG | - | chr3_4:74929064-74929083 | Msa0521900:intron | 50.0% | |
AGCAGGAGGAATGATGTCTC+TGG | - | chr3_4:74929078-74929097 | Msa0521900:intron | 50.0% | |
GGATGTTTCCCCACATCCAT+AGG | + | chr3_4:74929123-74929142 | None:intergenic | 50.0% | |
GTTTCACACCAACACCAGTC+TGG | - | chr3_4:74929182-74929201 | Msa0521900:intron | 50.0% | |
TCACGGTCGAACTGTTGTCA+AGG | - | chr3_4:74929210-74929229 | Msa0521900:intron | 50.0% | |
AAACGAGCATGTCGTAGCTC+TGG | - | chr3_4:74929243-74929262 | Msa0521900:intron | 50.0% | |
CAGCCATGGCCAATTAGGTT+TGG | - | chr3_4:74929324-74929343 | Msa0521900:intron | 50.0% | |
GCCATGGCCAATTAGGTTTG+GGG | - | chr3_4:74929326-74929345 | Msa0521900:intron | 50.0% | |
CCATGGCCAATTAGGTTTGG+GGG | - | chr3_4:74929327-74929346 | Msa0521900:intron | 50.0% | |
GCCAATTAGGTTTGGGGGAT+AGG | - | chr3_4:74929332-74929351 | Msa0521900:intron | 50.0% | |
GCCTATCCCCCAAACCTAAT+TGG | + | chr3_4:74929336-74929355 | None:intergenic | 50.0% | |
AGCAAGCAGAGCAGTGTGAA+AGG | + | chr3_4:74929437-74929456 | None:intergenic | 50.0% | |
! | GAAAGCATGTGCTGGACCTT+TGG | - | chr3_4:74929484-74929503 | Msa0521900:intron | 50.0% |
!! | ACCTTTGGCCTTGGTGAGAA+TGG | - | chr3_4:74929499-74929518 | Msa0521900:intron | 50.0% |
! | CAAGTTGGCCATTCTCACCA+AGG | + | chr3_4:74929510-74929529 | None:intergenic | 50.0% |
CTTGGTGAGAATGGCCAACT+TGG | - | chr3_4:74929508-74929527 | Msa0521900:intron | 50.0% | |
GAGAATGGCCAACTTGGACA+CGG | - | chr3_4:74929514-74929533 | Msa0521900:intron | 50.0% | |
TGGTCATGGGGAATGGAGAA+GGG | - | chr3_4:74929655-74929674 | Msa0521900:intron | 50.0% | |
CACACAACTTTAACGGGACC+CGG | + | chr3_4:74929781-74929800 | None:intergenic | 50.0% | |
GGTCCCGTTAAAGTTGTGTG+TGG | - | chr3_4:74929781-74929800 | Msa0521900:intron | 50.0% | |
GCCCCACACACAACTTTAAC+GGG | + | chr3_4:74929787-74929806 | None:intergenic | 50.0% | |
CGCCCCACACACAACTTTAA+CGG | + | chr3_4:74929788-74929807 | None:intergenic | 50.0% | |
CGTTAAAGTTGTGTGTGGGG+CGG | - | chr3_4:74929786-74929805 | Msa0521900:intron | 50.0% | |
TGTTGCTCAGGAGGGACATA+AGG | - | chr3_4:74929822-74929841 | Msa0521900:intron | 50.0% | |
AGGGACATAAGGTGTGGTCT+TGG | - | chr3_4:74929833-74929852 | Msa0521900:intron | 50.0% | |
GGGACATAAGGTGTGGTCTT+GGG | - | chr3_4:74929834-74929853 | Msa0521900:intron | 50.0% | |
! | GGACATAAGGTGTGGTCTTG+GGG | - | chr3_4:74929835-74929854 | Msa0521900:intron | 50.0% |
! | ATAAGGTGTGGTCTTGGGGT+AGG | - | chr3_4:74929839-74929858 | Msa0521900:intron | 50.0% |
! | TAAGGTGTGGTCTTGGGGTA+GGG | - | chr3_4:74929840-74929859 | Msa0521900:intron | 50.0% |
ACACTCCCACCATTGTTCTG+TGG | - | chr3_4:74929905-74929924 | Msa0521900:intron | 50.0% | |
TGTTGGAGGCCACAGAACAA+TGG | + | chr3_4:74929917-74929936 | None:intergenic | 50.0% | |
TCTGTGGCCTCCAACAATTG+AGG | - | chr3_4:74929921-74929940 | Msa0521900:intron | 50.0% | |
CTGTGGCCTCCAACAATTGA+GGG | - | chr3_4:74929922-74929941 | Msa0521900:intron | 50.0% | |
! | GGAGTGTCTCCAATCTTCAG+AGG | - | chr3_4:74930317-74930336 | Msa0521900:five_prime_UTR | 50.0% |
AAGAGTTGTGTTCTCGCGGG+AGG | - | chr3_4:74926709-74926728 | Msa0521900:three_prime_UTR | 55.0% | |
GTCGGGGTTCGGATAACTTC+CGG | + | chr3_4:74926747-74926766 | None:intergenic | 55.0% | |
ATTGCGGGACCCTATGGATG+TGG | - | chr3_4:74929110-74929129 | Msa0521900:intron | 55.0% | |
TTGCGGGACCCTATGGATGT+GGG | - | chr3_4:74929111-74929130 | Msa0521900:intron | 55.0% | |
CGACCGTGAAAATCCCAGAC+TGG | + | chr3_4:74929199-74929218 | None:intergenic | 55.0% | |
CCCCCAAACCTAATTGGCCA+TGG | + | chr3_4:74929330-74929349 | None:intergenic | 55.0% | |
ATGTGCTGGACCTTTGGCCT+TGG | - | chr3_4:74929490-74929509 | Msa0521900:intron | 55.0% | |
GCCATTCTCACCAAGGCCAA+AGG | + | chr3_4:74929503-74929522 | None:intergenic | 55.0% | |
GCGTTGTTCCGTGTCCAAGT+TGG | + | chr3_4:74929525-74929544 | None:intergenic | 55.0% | |
AACTGGGGACGTGTGGTCAT+GGG | - | chr3_4:74929642-74929661 | Msa0521900:intron | 55.0% | |
GTGGTCATGGGGAATGGAGA+AGG | - | chr3_4:74929654-74929673 | Msa0521900:intron | 55.0% | |
TGGGGAATGGAGAAGGGTCT+TGG | - | chr3_4:74929661-74929680 | Msa0521900:intron | 55.0% | |
CTCAGGAGGGACATAAGGTG+TGG | - | chr3_4:74929827-74929846 | Msa0521900:intron | 55.0% | |
! | AAGGTGTGGTCTTGGGGTAG+GGG | - | chr3_4:74929841-74929860 | Msa0521900:intron | 55.0% |
AGGAGTGGAGTCCTTGGGAA+TGG | - | chr3_4:74929865-74929884 | Msa0521900:intron | 55.0% | |
GGAGGCCACAGAACAATGGT+GGG | + | chr3_4:74929913-74929932 | None:intergenic | 55.0% | |
TGGAGGCCACAGAACAATGG+TGG | + | chr3_4:74929914-74929933 | None:intergenic | 55.0% | |
CTTCAGCTCATTCAACGCCG+TGG | + | chr3_4:74930040-74930059 | None:intergenic | 55.0% | |
TGTGTTCTCGCGGGAGGCAA+TGG | - | chr3_4:74926715-74926734 | Msa0521900:three_prime_UTR | 60.0% | |
GCGCTGTCAAGCGCAGATTG+CGG | - | chr3_4:74927295-74927314 | Msa0521900:CDS | 60.0% | |
TAGCGGCGCCATAGCGCTAT+AGG | + | chr3_4:74927429-74927448 | None:intergenic | 60.0% | |
ATAGCGCTATGGCGCCGCTA+TGG | - | chr3_4:74927429-74927448 | Msa0521900:CDS | 60.0% | |
TGCGGGACCCTATGGATGTG+GGG | - | chr3_4:74929112-74929131 | Msa0521900:intron | 60.0% | |
GTTTGGGGGATAGGCAGAGC+AGG | - | chr3_4:74929341-74929360 | Msa0521900:intron | 60.0% | |
TGTCCTCAACTGGGGACGTG+TGG | - | chr3_4:74929635-74929654 | Msa0521900:intron | 60.0% | |
TGACCACACGTCCCCAGTTG+AGG | + | chr3_4:74929641-74929660 | None:intergenic | 60.0% | |
CAACTGGGGACGTGTGGTCA+TGG | - | chr3_4:74929641-74929660 | Msa0521900:intron | 60.0% | |
ACTGGGGACGTGTGGTCATG+GGG | - | chr3_4:74929643-74929662 | Msa0521900:intron | 60.0% | |
GGACGTGTGGTCATGGGGAA+TGG | - | chr3_4:74929648-74929667 | Msa0521900:intron | 60.0% | |
! | TGTGGTCTTGGGGTAGGGGA+AGG | - | chr3_4:74929845-74929864 | Msa0521900:intron | 60.0% |
TCTTGGGGTAGGGGAAGGAG+TGG | - | chr3_4:74929850-74929869 | Msa0521900:intron | 60.0% | |
AGGGGAAGGAGTGGAGTCCT+TGG | - | chr3_4:74929859-74929878 | Msa0521900:intron | 60.0% | |
GGGGAAGGAGTGGAGTCCTT+GGG | - | chr3_4:74929860-74929879 | Msa0521900:intron | 60.0% | |
CGGGAGGCAATGGAAGACGC+CGG | - | chr3_4:74926725-74926744 | Msa0521900:three_prime_UTR | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 74926683 | 74930723 | 74926683 | ID=Msa0521900;Name=Msa0521900 |
chr3_4 | mRNA | 74926683 | 74930723 | 74926683 | ID=Msa0521900-mRNA-1;Parent=Msa0521900;Name=Msa0521900-mRNA-1;_AED=0.12;_eAED=0.12;_QI=428|1|1|1|1|0.75|4|373|489 |
chr3_4 | exon | 74926683 | 74928342 | 74926683 | ID=Msa0521900-mRNA-1:exon:21339;Parent=Msa0521900-mRNA-1 |
chr3_4 | exon | 74928434 | 74928725 | 74928434 | ID=Msa0521900-mRNA-1:exon:21338;Parent=Msa0521900-mRNA-1 |
chr3_4 | exon | 74930269 | 74930442 | 74930269 | ID=Msa0521900-mRNA-1:exon:21337;Parent=Msa0521900-mRNA-1 |
chr3_4 | exon | 74930579 | 74930723 | 74930579 | ID=Msa0521900-mRNA-1:exon:21336;Parent=Msa0521900-mRNA-1 |
chr3_4 | five_prime_UTR | 74930579 | 74930723 | 74930579 | ID=Msa0521900-mRNA-1:five_prime_utr;Parent=Msa0521900-mRNA-1 |
chr3_4 | five_prime_UTR | 74930269 | 74930442 | 74930269 | ID=Msa0521900-mRNA-1:five_prime_utr;Parent=Msa0521900-mRNA-1 |
chr3_4 | five_prime_UTR | 74928617 | 74928725 | 74928617 | ID=Msa0521900-mRNA-1:five_prime_utr;Parent=Msa0521900-mRNA-1 |
chr3_4 | CDS | 74928434 | 74928616 | 74928434 | ID=Msa0521900-mRNA-1:cds;Parent=Msa0521900-mRNA-1 |
chr3_4 | CDS | 74927056 | 74928342 | 74927056 | ID=Msa0521900-mRNA-1:cds;Parent=Msa0521900-mRNA-1 |
chr3_4 | three_prime_UTR | 74926683 | 74927055 | 74926683 | ID=Msa0521900-mRNA-1:three_prime_utr;Parent=Msa0521900-mRNA-1 |
Gene Sequence |
Protein sequence |