AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0032040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032040 MtrunA17_Chr1g0190301 97.938 388 8 0 1 388 1 388 0.0 776
Msa0032040 MtrunA17_Chr7g0274471 54.415 419 134 11 8 385 37 439 8.52e-129 377
Msa0032040 MtrunA17_Chr7g0261911 44.656 421 177 11 21 388 72 489 7.48e-95 292
Msa0032040 MtrunA17_Chr7g0258551 58.955 134 54 1 174 307 211 343 3.57e-51 176
Msa0032040 MtrunA17_Chr1g0175091 55.488 164 59 5 166 329 253 402 3.94e-50 174
Msa0032040 MtrunA17_Chr2g0291021 55.921 152 63 2 175 322 49 200 5.29e-47 163
Msa0032040 MtrunA17_Chr7g0254981 52.903 155 70 2 174 325 49 203 1.14e-44 155
Msa0032040 MtrunA17_Chr6g0461641 45.026 191 64 5 171 327 38 221 1.36e-40 148
Msa0032040 MtrunA17_Chr2g0321461 43.558 163 72 2 161 303 31 193 1.32e-36 137
Msa0032040 MtrunA17_Chr5g0409731 42.857 182 81 5 168 326 18 199 1.92e-34 129
Msa0032040 MtrunA17_Chr5g0417521 40.625 160 77 3 171 314 11 168 4.24e-34 129
Msa0032040 MtrunA17_Chr8g0356501 42.759 145 74 2 165 303 27 168 6.45e-34 129
Msa0032040 MtrunA17_Chr1g0175071 46.479 142 75 1 165 306 167 307 8.34e-34 128
Msa0032040 MtrunA17_Chr4g0042451 41.176 170 78 4 171 325 13 175 1.12e-33 128
Msa0032040 MtrunA17_Chr2g0310011 45.985 137 71 2 165 298 25 161 2.13e-32 124
Msa0032040 MtrunA17_Chr7g0242521 40.373 161 91 3 175 331 13 172 1.43e-30 117
Msa0032040 MtrunA17_Chr2g0290991 41.781 146 73 3 167 300 31 176 1.62e-28 113
Msa0032040 MtrunA17_Chr1g0197171 40.559 143 76 2 167 300 36 178 2.79e-28 112
Msa0032040 MtrunA17_Chr1g0175081 55.263 76 33 1 164 239 12 86 8.30e-24 94.7
Msa0032040 MtrunA17_Chr7g0258531 42.636 129 71 2 174 300 212 339 5.21e-23 99.0
Msa0032040 MtrunA17_Chr1g0162931 69.643 56 17 0 176 231 19 74 3.05e-20 89.7
Msa0032040 MtrunA17_Chr1g0210911 67.857 56 18 0 176 231 23 78 6.28e-20 89.7
Msa0032040 MtrunA17_Chr3g0095611 59.649 57 23 0 175 231 19 75 1.21e-19 86.7
Msa0032040 MtrunA17_Chr2g0288601 63.793 58 21 0 176 233 72 129 2.45e-19 83.6
Msa0032040 MtrunA17_Chr7g0243081 59.701 67 26 1 166 231 61 127 6.35e-19 87.0
Msa0032040 MtrunA17_Chr2g0320231 61.194 67 25 1 166 231 87 153 1.14e-18 86.7
Msa0032040 MtrunA17_Chr8g0379121 64.286 56 20 0 176 231 112 167 2.26e-18 86.3
Msa0032040 MtrunA17_Chr3g0109981 42.982 114 49 3 143 254 254 353 2.44e-18 86.3
Msa0032040 MtrunA17_Chr1g0154261 60.938 64 25 0 176 239 127 190 3.90e-18 84.0
Msa0032040 MtrunA17_Chr8g0366281 57.534 73 29 1 169 239 167 239 8.60e-18 84.0
Msa0032040 MtrunA17_Chr6g0479431 62.500 64 22 1 176 237 203 266 1.23e-17 83.6
Msa0032040 MtrunA17_Chr5g0410741 63.333 60 22 0 172 231 216 275 3.78e-17 82.4
Msa0032040 MtrunA17_Chr2g0283951 58.571 70 28 1 157 225 70 139 5.39e-17 81.6
Msa0032040 MtrunA17_Chr4g0062921 48.235 85 42 1 166 248 226 310 2.75e-15 77.0
Msa0032040 MtrunA17_Chr7g0275401 60.345 58 22 1 171 228 188 244 1.35e-14 73.9
Msa0032040 MtrunA17_Chr2g0304841 58.621 58 23 1 171 228 209 265 1.42e-14 75.5
Msa0032040 MtrunA17_Chr4g0009901 50.000 76 36 2 171 246 164 237 2.60e-14 72.8
Msa0032040 MtrunA17_Chr4g0045361 61.111 54 21 0 175 228 274 327 1.53e-13 71.6
Msa0032040 MtrunA17_Chr1g0149841 52.941 68 31 1 171 238 187 253 4.73e-13 70.5
Msa0032040 MtrunA17_Chr3g0137101 56.897 58 24 1 171 228 194 250 4.93e-13 70.5
Msa0032040 MtrunA17_Chr5g0422621 58.929 56 23 0 173 228 196 251 6.15e-13 69.3
Msa0032040 MtrunA17_Chr1g0198601 49.231 65 33 0 173 237 209 273 8.33e-13 69.3
Msa0032040 MtrunA17_Chr5g0402631 53.731 67 30 1 172 237 211 277 8.96e-13 68.9
Msa0032040 MtrunA17_Chr4g0067981 43.478 92 43 2 175 258 215 305 1.47e-12 69.3
Msa0032040 MtrunA17_Chr4g0031961 50.000 72 34 2 158 228 113 183 1.61e-12 67.8
Msa0032040 MtrunA17_Chr4g0074401 50.000 64 31 1 171 234 199 261 2.59e-12 68.2
Msa0032040 MtrunA17_Chr1g0149831 55.932 59 22 1 170 228 123 177 2.90e-12 65.9
Msa0032040 MtrunA17_Chr4g0054981 55.172 58 25 1 171 228 306 362 4.10e-12 67.8
Msa0032040 MtrunA17_Chr1g0161431 52.941 68 25 2 161 228 192 252 4.16e-12 67.8
Msa0032040 MtrunA17_Chr4g0074411 51.562 64 30 1 171 234 197 259 5.02e-12 67.4
Msa0032040 MtrunA17_Chr4g0009981 53.448 58 26 1 171 228 112 168 6.22e-12 65.5
Msa0032040 MtrunA17_Chr7g0255711 55.556 54 23 1 175 228 91 143 1.03e-11 65.1
Msa0032040 MtrunA17_Chr4g0074421 53.571 56 25 1 170 225 128 182 1.20e-11 63.5
Msa0032040 MtrunA17_Chr2g0294911 50.847 59 28 1 170 228 206 263 3.52e-11 64.7
Msa0032040 MtrunA17_Chr4g0040481 49.153 59 29 1 173 231 156 213 4.04e-11 64.3
Msa0032040 MtrunA17_Chr2g0324891 49.153 59 29 1 173 231 159 216 4.66e-11 63.9
Msa0032040 MtrunA17_Chr5g0400241 53.448 58 26 1 171 228 307 363 6.33e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0032040 AT5G29000.1 56.972 251 99 5 61 306 76 322 8.49e-84 260
Msa0032040 AT5G29000.3 56.972 251 99 5 61 306 76 322 8.49e-84 260
Msa0032040 AT5G29000.2 56.972 251 99 5 61 306 119 365 2.20e-83 260
Msa0032040 AT4G28610.1 49.020 306 131 9 17 304 57 355 3.34e-77 244
Msa0032040 AT3G04450.4 50.365 274 120 7 43 309 71 335 2.23e-76 242
Msa0032040 AT3G04450.2 50.365 274 120 7 43 309 71 335 2.23e-76 242
Msa0032040 AT3G04450.1 50.545 275 118 7 43 309 111 375 4.84e-76 242
Msa0032040 AT2G20400.1 49.333 225 95 4 93 304 142 360 1.73e-56 190
Msa0032040 AT2G20400.2 49.115 226 95 5 93 304 142 361 1.04e-54 186
Msa0032040 AT2G01060.1 58.125 160 58 3 161 315 5 160 2.21e-51 174
Msa0032040 AT5G29000.4 52.778 180 79 3 61 238 119 294 1.15e-49 170
Msa0032040 AT5G06800.1 57.343 143 60 1 167 309 184 325 3.66e-49 170
Msa0032040 AT5G06800.2 55.405 148 60 2 167 309 184 330 7.26e-47 164
Msa0032040 AT3G04450.3 47.000 200 93 6 43 238 111 301 1.16e-46 162
Msa0032040 AT3G13040.3 56.643 143 57 1 170 307 236 378 6.70e-43 155
Msa0032040 AT3G13040.1 56.643 143 57 1 170 307 236 378 6.70e-43 155
Msa0032040 AT3G13040.2 56.643 143 57 1 170 307 236 378 6.70e-43 155
Msa0032040 AT4G13640.1 42.105 209 96 6 161 356 22 218 6.45e-42 149
Msa0032040 AT3G24120.1 45.882 170 78 4 162 317 27 196 3.88e-40 144
Msa0032040 AT4G13640.2 41.509 212 96 7 161 356 22 221 8.25e-40 144
Msa0032040 AT3G24120.2 45.087 173 78 5 162 317 27 199 4.82e-38 139
Msa0032040 AT3G04030.3 44.304 158 65 2 165 303 35 188 7.65e-38 140
Msa0032040 AT5G18240.1 45.122 164 63 3 161 303 31 188 2.73e-37 139
Msa0032040 AT5G18240.4 45.122 164 63 3 161 303 31 188 2.73e-37 139
Msa0032040 AT1G69580.1 44.311 167 73 2 167 316 26 189 3.58e-37 137
Msa0032040 AT1G69580.2 44.706 170 69 5 167 316 26 190 1.24e-36 136
Msa0032040 AT3G04030.2 43.038 158 66 3 165 303 35 187 8.97e-35 132
Msa0032040 AT1G79430.2 44.295 149 74 3 165 307 24 169 2.70e-34 130
Msa0032040 AT5G18240.5 44.512 164 62 4 161 303 31 186 3.03e-34 131
Msa0032040 AT5G45580.2 40.373 161 78 1 165 307 13 173 3.74e-33 125
Msa0032040 AT3G04030.1 41.772 158 63 3 165 303 35 182 3.81e-32 125
Msa0032040 AT5G45580.1 40.645 155 74 1 171 307 3 157 5.32e-32 122
Msa0032040 AT5G18240.2 42.683 164 61 4 161 303 31 182 1.23e-31 124
Msa0032040 AT5G18240.3 42.683 164 61 4 161 303 31 182 1.23e-31 124
Msa0032040 AT2G01060.2 56.757 111 43 2 210 315 1 111 8.16e-31 118
Msa0032040 AT3G12730.1 39.752 161 89 4 159 311 7 167 5.12e-30 115
Msa0032040 AT5G06800.3 61.644 73 28 0 167 239 184 256 3.17e-25 103
Msa0032040 AT1G14600.1 69.643 56 17 0 176 231 24 79 9.11e-20 88.2
Msa0032040 AT2G42660.1 56.923 65 28 0 176 240 51 115 1.15e-19 88.2
Msa0032040 AT4G04605.1 49.425 87 43 1 163 248 1 87 4.24e-19 85.5
Msa0032040 AT5G42630.2 60.938 64 25 0 176 239 106 169 2.22e-18 83.6
Msa0032040 AT2G02060.2 67.925 53 17 0 176 228 30 82 3.17e-18 84.0
Msa0032040 AT2G02060.1 67.925 53 17 0 176 228 30 82 3.17e-18 84.0
Msa0032040 AT2G40260.1 60.606 66 25 1 167 231 73 138 3.68e-18 85.9
Msa0032040 AT5G42630.1 60.938 64 25 0 176 239 106 169 5.17e-18 84.0
Msa0032040 AT4G17695.1 62.121 66 23 1 176 239 165 230 5.53e-18 84.3
Msa0032040 AT3G04030.5 39.655 116 47 2 207 303 1 112 2.15e-17 82.8
Msa0032040 AT5G16560.1 57.143 77 30 2 172 245 216 292 3.15e-17 83.2
Msa0032040 AT1G32240.2 63.333 60 22 0 172 231 210 269 3.43e-17 82.8
Msa0032040 AT2G06020.1 52.308 65 31 0 167 231 78 142 4.02e-17 81.6
Msa0032040 AT1G32240.1 63.333 60 22 0 172 231 210 269 4.11e-17 82.8
Msa0032040 AT2G38300.1 60.714 56 22 0 176 231 55 110 4.42e-17 82.0
Msa0032040 AT1G79430.1 38.318 107 57 3 207 307 1 104 9.75e-16 77.4
Msa0032040 AT4G04580.1 55.385 65 28 1 176 240 15 78 1.62e-15 74.3
Msa0032040 AT2G03500.1 57.746 71 28 1 169 237 225 295 1.92e-15 77.8
Msa0032040 AT1G25550.1 57.143 63 27 0 172 234 206 268 7.25e-15 75.5
Msa0032040 AT4G37180.1 52.308 65 31 0 164 228 199 263 7.46e-14 72.8
Msa0032040 AT4G37180.2 52.308 65 31 0 164 228 206 270 8.54e-14 72.4
Msa0032040 AT1G68670.1 51.515 66 32 0 172 237 212 277 1.50e-13 71.6
Msa0032040 AT4G31920.1 48.101 79 39 2 171 249 179 255 1.91e-13 72.0
Msa0032040 AT3G16857.3 64.815 54 18 1 175 228 167 219 5.81e-13 70.9
Msa0032040 AT3G16857.2 64.815 54 18 1 175 228 237 289 6.24e-13 70.9
Msa0032040 AT3G16857.1 64.815 54 18 1 175 228 237 289 6.71e-13 70.9
Msa0032040 AT5G58080.1 57.895 57 23 1 172 228 191 246 8.82e-13 70.1
Msa0032040 AT4G04555.1 47.143 70 36 1 169 238 8 76 9.39e-13 64.7
Msa0032040 AT5G44190.1 54.237 59 26 1 173 231 145 202 1.51e-12 68.9
Msa0032040 AT2G25180.1 59.322 59 23 1 170 228 190 247 1.54e-12 69.3
Msa0032040 AT5G44190.2 54.237 59 26 1 173 231 145 202 1.71e-12 68.6
Msa0032040 AT1G49560.1 55.556 63 28 0 175 237 192 254 2.40e-12 67.8
Msa0032040 AT2G40970.1 57.407 54 22 1 175 228 105 157 2.63e-12 66.6
Msa0032040 AT1G25550.2 59.259 54 22 0 172 225 206 259 2.64e-12 67.0
Msa0032040 AT5G05090.1 55.556 54 23 1 175 228 81 133 3.54e-12 66.6
Msa0032040 AT3G62670.1 53.968 63 25 1 175 233 211 273 4.57e-12 67.8
Msa0032040 AT5G59570.2 50.820 61 29 1 168 228 134 193 4.89e-12 66.6
Msa0032040 AT5G59570.1 50.820 61 29 1 168 228 134 193 4.89e-12 66.6
Msa0032040 AT3G10760.1 55.556 54 23 1 175 228 105 157 4.97e-12 67.0
Msa0032040 AT3G25790.1 54.545 55 25 0 180 234 201 255 6.12e-12 67.0
Msa0032040 AT3G46640.3 45.833 72 38 1 157 228 126 196 7.05e-12 66.2
Msa0032040 AT3G46640.2 45.833 72 38 1 157 228 126 196 7.54e-12 66.2
Msa0032040 AT3G46640.1 45.833 72 38 1 157 228 126 196 7.54e-12 66.2
Msa0032040 AT2G20570.1 55.932 59 25 1 173 231 151 208 1.18e-11 66.2
Msa0032040 AT4G37180.3 50.000 62 31 0 164 225 199 260 1.32e-11 65.1
Msa0032040 AT4G18020.8 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0032040 AT4G18020.11 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0032040 AT4G18020.4 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0032040 AT4G18020.5 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0032040 AT4G18020.10 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0032040 AT4G18020.7 50.769 65 31 1 167 231 288 351 1.84e-11 65.9
Msa0032040 AT4G18020.3 50.769 65 31 1 167 231 288 351 1.95e-11 65.9
Msa0032040 AT4G18020.2 50.769 65 31 1 167 231 288 351 1.95e-11 65.9
Msa0032040 AT4G18020.1 50.769 65 31 1 167 231 288 351 1.95e-11 65.9
Msa0032040 AT4G18020.6 50.769 65 31 1 167 231 288 351 1.95e-11 65.9
Msa0032040 AT4G18020.9 50.769 65 31 1 167 231 288 351 1.95e-11 65.9
Msa0032040 AT2G20570.2 58.182 55 22 1 177 231 171 224 2.35e-11 65.5
Msa0032040 AT1G49190.1 52.632 57 24 1 175 228 215 271 2.93e-11 65.1
Msa0032040 AT1G13300.1 47.619 63 33 0 175 237 181 243 6.91e-11 63.5
Msa0032040 AT1G67710.3 57.692 52 22 0 177 228 121 172 8.90e-11 63.5
Msa0032040 AT1G67710.2 57.692 52 22 0 177 228 130 181 9.83e-11 63.5

Find 150 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGCTCTGTGCTTGTATTC+TGG 0.101134 1_1:+58962490 None:intergenic
TGTATTCCACATGGTCATTC+TGG 0.149403 1_1:+58964787 None:intergenic
GGGATGTTTCAACTGTATTT+AGG 0.160343 1_1:-58962140 Msa0032040:three_prime_UTR
GTTAACTTATTATGGGAAAA+TGG 0.168932 1_1:+58962082 None:intergenic
TTGTAGAGGTTAACTTATTA+TGG 0.169637 1_1:+58962074 None:intergenic
AGGAAGATCATTAACTTCTT+TGG 0.221222 1_1:+58964104 None:intergenic
CACATACCTTCTGATGATTC+TGG 0.228637 1_1:+58963702 None:intergenic
TTGCTCTGTGCTTGTATTCT+GGG 0.237413 1_1:+58962491 None:intergenic
CCGAGAAGTTCATTCCAATT+TGG 0.239899 1_1:+58964672 None:intergenic
ATGATTCTATTCAGCCAAAT+TGG 0.254038 1_1:-58964686 Msa0032040:CDS
CTCCTTGAAATCCGTTGTTT+TGG 0.268176 1_1:+58964737 None:intergenic
GTTGTTCATGAAGCCGCTTC+TGG 0.275179 1_1:+58962863 None:intergenic
TCTGGAGTCCAACGCATTCT+AGG 0.277206 1_1:+58964048 None:intergenic
TGAAACCAAATCACTGATTA+AGG 0.289023 1_1:+58962276 None:intergenic
GACTTCCTTAATCAGTGATT+TGG 0.309411 1_1:-58962281 Msa0032040:three_prime_UTR
TTAACTTATTATGGGAAAAT+GGG 0.313885 1_1:+58962083 None:intergenic
ATGCATAATGAAGAATGAAT+TGG 0.319074 1_1:+58966329 None:intergenic
ATAGGAGGCTATAAGCTTCT+AGG 0.322858 1_1:+58965903 None:intergenic
TGCATAATGAAGAATGAATT+GGG 0.323756 1_1:+58966330 None:intergenic
GGATGTTTCAACTGTATTTA+GGG 0.328120 1_1:-58962139 Msa0032040:three_prime_UTR
TTTAGGGATTTATAAGTTAT+GGG 0.339672 1_1:-58962123 Msa0032040:three_prime_UTR
ATTTAGGGATTTATAAGTTA+TGG 0.343282 1_1:-58962124 Msa0032040:three_prime_UTR
ACATTTCTTGTCCTCGACTT+AGG 0.347355 1_1:-58962254 Msa0032040:three_prime_UTR
AAGGGAGATCAAAGGGAAAA+AGG 0.353136 1_1:+58962005 None:intergenic
GTATTCTGGGAACTTCCTTC+AGG 0.358705 1_1:+58962504 None:intergenic
TGTAGAGGTTAACTTATTAT+GGG 0.367347 1_1:+58962075 None:intergenic
ACAAAGTTGATTGATTCATC+TGG 0.372412 1_1:-58965052 Msa0032040:five_prime_UTR
GAATACAAGCACAGAGCAAA+AGG 0.372831 1_1:-58962487 Msa0032040:CDS
TTCTGGGTGGGAACATTATC+AGG 0.378603 1_1:+58964804 None:intergenic
TGCTTACTTTATTCTCGTGT+TGG 0.378777 1_1:-58961934 Msa0032040:three_prime_UTR
GTAGTCGACACAGAAGAATT+AGG 0.380557 1_1:+58964084 None:intergenic
CATTTCTTGTCCTCGACTTA+GGG 0.386134 1_1:-58962253 Msa0032040:three_prime_UTR
ATTGAAGTCAACTTCTTCTC+TGG 0.390129 1_1:+58963252 None:intergenic
TATTCTTACGTCCGCTCATT+CGG 0.390922 1_1:-58966376 Msa0032040:five_prime_UTR
TTGTATATTTATGGAATGTT+TGG 0.399028 1_1:-58962193 Msa0032040:three_prime_UTR
GTATTCCACATGGTCATTCT+GGG 0.400152 1_1:+58964788 None:intergenic
TCCTATGAAGCATGAGGATT+AGG 0.426267 1_1:-58965886 Msa0032040:five_prime_UTR
AGAACTTCATGAGGCCTTTG+TGG 0.428094 1_1:-58964028 Msa0032040:CDS
AGCTACCGGTGAACTTGAGC+TGG 0.429993 1_1:-58962451 Msa0032040:CDS
GCCTAATCCTCATGCTTCAT+AGG 0.435700 1_1:+58965885 None:intergenic
GGAGCTTCTAGAAGCATTGT+TGG 0.437697 1_1:-58962168 Msa0032040:three_prime_UTR
TCGGAAGTTTACTTCTCAAA+AGG 0.438829 1_1:+58962040 None:intergenic
TGCCAAAACAACGGATTTCA+AGG 0.441739 1_1:-58964739 Msa0032040:CDS
CCAAATTGGAATGAACTTCT+CGG 0.447252 1_1:-58964672 Msa0032040:CDS
ACAAAGGCCTCATGAAGTTC+TGG 0.447758 1_1:+58964030 None:intergenic
TATTCCCTCTTCCTCGATGC+AGG 0.454247 1_1:-58965000 Msa0032040:CDS
CTTCTTCTTCTTCCTTCGTA+AGG 0.456915 1_1:-58966270 Msa0032040:intron
ACTTAGGGTATAATTTGCAT+TGG 0.466215 1_1:-58962238 Msa0032040:three_prime_UTR
ATCAAGTTCAAGACACCCTT+AGG 0.470004 1_1:+58963884 None:intergenic
ATATGTAGAGGCTACTCCTA+AGG 0.470935 1_1:-58963900 Msa0032040:intron
TATACTGCTGCTGTGAAACC+TGG 0.475770 1_1:+58964142 None:intergenic
GTGATAAAACTATACGAGAT+AGG 0.478425 1_1:+58961982 None:intergenic
GAAATACTAGATGCCTTCAC+AGG 0.489007 1_1:+58962352 None:intergenic
GATAGTGCCACACTTGATAG+TGG 0.493745 1_1:+58962606 None:intergenic
ACATAACGTCACTTTCTTGA+GGG 0.494013 1_1:+58964865 None:intergenic
GGAGTGAAAACAAGGTGGGT+GGG 0.497136 1_1:-58966409 None:intergenic
TGATGATTCTGGTTTGTACC+TGG 0.500432 1_1:+58963713 None:intergenic
AGAAAGTGACGTTATGTCCT+GGG 0.500596 1_1:-58964859 Msa0032040:CDS
AGATAGGAAGGGAGATCAAA+GGG 0.504847 1_1:+58961998 None:intergenic
AATTGAAGAATATCTTCAAA+TGG 0.505497 1_1:+58964828 None:intergenic
CGTTATCAGGCTGTTCGGAA+GGG 0.506119 1_1:+58964928 None:intergenic
ATGGACGTTATCAGGCTGTT+CGG 0.506272 1_1:+58964923 None:intergenic
ATTGTGGTTGTATAGGCCTA+AGG 0.506694 1_1:-58962920 Msa0032040:intron
TGCAGCCTGCATCGAGGAAG+AGG 0.509129 1_1:+58964995 None:intergenic
TGCTTCTACATACAACATGC+TGG 0.510667 1_1:-58962329 Msa0032040:three_prime_UTR
AGAAGCATTGCGGCTGCAGA+TGG 0.512926 1_1:-58962890 Msa0032040:CDS
TACAATGGTTCTGAAGTCTT+GGG 0.514053 1_1:-58964768 Msa0032040:CDS
AAGAAAGTGACGTTATGTCC+TGG 0.515386 1_1:-58964860 Msa0032040:CDS
TCTCTTGATGCAAGAGACCC+AGG 0.517615 1_1:-58964160 Msa0032040:CDS
AATTCCAACATCAGAAGTGT+TGG 0.526621 1_1:-58964966 Msa0032040:CDS
ATACAATGGTTCTGAAGTCT+TGG 0.526812 1_1:-58964769 Msa0032040:CDS
TTGAACTTGATGAAAGTTGA+GGG 0.529752 1_1:-58963872 Msa0032040:CDS
TTGTGGGTGGTGCGGTAAGT+TGG 0.530504 1_1:+58962421 None:intergenic
TAAAACTATACGAGATAGGA+AGG 0.533751 1_1:+58961986 None:intergenic
TTCTCCCAGCTCAAGTTCAC+CGG 0.534132 1_1:+58962446 None:intergenic
GTTATCAGGCTGTTCGGAAG+GGG 0.535423 1_1:+58964929 None:intergenic
GAGTGAAAACAAGGTGGGTG+GGG 0.536550 1_1:-58966408 None:intergenic
TAACTTATTATGGGAAAATG+GGG 0.538218 1_1:+58962084 None:intergenic
GTCTCTTGCATCAAGAGAGA+AGG 0.539948 1_1:+58964165 None:intergenic
AATTTAGAAAACACAAATGA+AGG 0.541617 1_1:-58962570 Msa0032040:CDS
TCATCTGTAGATGCTTCCCT+TGG 0.544034 1_1:+58962667 None:intergenic
TCATGTGAAAAGCCATCTGC+AGG 0.546156 1_1:-58963837 Msa0032040:intron
ACTAGATGCCTTCACAGGGT+TGG 0.546742 1_1:+58962357 None:intergenic
GAGATAGGAAGGGAGATCAA+AGG 0.552104 1_1:+58961997 None:intergenic
TAGAAGCATTGTTGGATCGA+GGG 0.552578 1_1:-58962160 Msa0032040:three_prime_UTR
TTGTGGTTGTATAGGCCTAA+GGG 0.553041 1_1:-58962919 Msa0032040:intron
AAGAATTTCCAACCCTGTGA+AGG 0.554623 1_1:-58962365 Msa0032040:three_prime_UTR
TCTCTTGCATCAAGAGAGAA+GGG 0.556360 1_1:+58964166 None:intergenic
ACGTTATCAGGCTGTTCGGA+AGG 0.560440 1_1:+58964927 None:intergenic
AGATCATTAACTTCTTTGGA+TGG 0.562377 1_1:+58964108 None:intergenic
TTCAAATGGATCAGTTCCCC+AGG 0.563936 1_1:+58964842 None:intergenic
AATGCTTCTGTAATCCCCTT+AGG 0.564243 1_1:+58962904 None:intergenic
AATACAAGCACAGAGCAAAA+GGG 0.565422 1_1:-58962486 Msa0032040:CDS
ATATTTATGGAATGTTTGGA+TGG 0.565950 1_1:-58962189 Msa0032040:three_prime_UTR
TATGTAGAGGCTACTCCTAA+GGG 0.566576 1_1:-58963899 Msa0032040:intron
CTGATTGACTGCTTCCACAA+AGG 0.570201 1_1:+58964014 None:intergenic
GACATAACGTCACTTTCTTG+AGG 0.571867 1_1:+58964864 None:intergenic
GTCCGCTCATTCGGCTCATG+AGG 0.575832 1_1:-58966367 Msa0032040:five_prime_UTR
TTCAGAAATATAGAACTGCC+AGG 0.576431 1_1:-58963731 Msa0032040:intron
CTAGAAGCATTGTTGGATCG+AGG 0.576857 1_1:-58962161 Msa0032040:three_prime_UTR
GGAGATGATGCTAAAGCTAC+CGG 0.580790 1_1:-58962465 Msa0032040:CDS
AATCTAAGCCTAGAATGCGT+TGG 0.584166 1_1:-58964056 Msa0032040:CDS
AGGAGTGAAAACAAGGTGGG+TGG 0.585250 1_1:-58966410 None:intergenic
AGATTCAGATTGAGAACCAA+GGG 0.585597 1_1:-58962683 Msa0032040:CDS
GTGGAAGCAGTCAATCAGCT+TGG 0.585863 1_1:-58964009 Msa0032040:CDS
AATAGACGAAGACATAGCTC+TGG 0.590376 1_1:+58965019 None:intergenic
AACAACGGATTTCAAGGAGT+GGG 0.590584 1_1:-58964733 Msa0032040:CDS
GAAGCAGTCAATCAGCTTGG+TGG 0.592276 1_1:-58964006 Msa0032040:CDS
AATGGTTCTGAAGTCTTGGG+TGG 0.595066 1_1:-58964765 Msa0032040:CDS
GCATAATGAAGAATGAATTG+GGG 0.596516 1_1:+58966331 None:intergenic
TAATCCTCATGCTTCATAGG+AGG 0.600130 1_1:+58965888 None:intergenic
CATTCTAGGCTTAGATTGCG+AGG 0.600994 1_1:+58964062 None:intergenic
ACACTTGATAGTGGAGCAGA+AGG 0.602869 1_1:+58962615 None:intergenic
TATGACAGAACCAAAATCAC+AGG 0.603724 1_1:-58964640 Msa0032040:intron
CTTGAACTTGATGAAAGTTG+AGG 0.606827 1_1:-58963873 Msa0032040:CDS
GTGTCCAACACTTCTGATGT+TGG 0.607725 1_1:+58964962 None:intergenic
TGCCTCATGAGCCGAATGAG+CGG 0.608177 1_1:+58966365 None:intergenic
GTCTGACACTAATATGATGT+TGG 0.608371 1_1:-58965854 Msa0032040:intron
ATACTGCTGCTGTGAAACCT+GGG 0.609600 1_1:+58964143 None:intergenic
GCGGCTTCATGAACAACTTG+AGG 0.611704 1_1:-58962857 Msa0032040:intron
CAGATTCAGATTGAGAACCA+AGG 0.612607 1_1:-58962684 Msa0032040:CDS
AGAATGTATTTCTGAAGCAG+AGG 0.614653 1_1:+58964896 None:intergenic
TTCCACATGGTCATTCTGGG+TGG 0.615350 1_1:+58964791 None:intergenic
GCTACCGGTGAACTTGAGCT+GGG 0.615664 1_1:-58962450 Msa0032040:CDS
TCCACATGGTCATTCTGGGT+GGG 0.616235 1_1:+58964792 None:intergenic
GCAAATTATACCCTAAGTCG+AGG 0.622359 1_1:+58962243 None:intergenic
GCAGCCTGCATCGAGGAAGA+GGG 0.625876 1_1:+58964996 None:intergenic
AAACAACGGATTTCAAGGAG+TGG 0.628215 1_1:-58964734 Msa0032040:CDS
ACTTCAGACAACATGCCTGA+AGG 0.630642 1_1:-58962519 Msa0032040:CDS
CAGAACCATTGTATTCCACA+TGG 0.632141 1_1:+58964778 None:intergenic
TGCAGATGGAACTCCAGAAG+CGG 0.633918 1_1:-58962876 Msa0032040:CDS
TACAAACCAGAATCATCAGA+AGG 0.635144 1_1:-58963708 Msa0032040:intron
TGTGGTTGTATAGGCCTAAG+GGG 0.641482 1_1:-58962918 Msa0032040:intron
TTCTGCTCCACTATCAAGTG+TGG 0.642875 1_1:-58962613 Msa0032040:CDS
GAAGACATAGCTCTGGTCGA+AGG 0.643788 1_1:+58965026 None:intergenic
AAATACTAGATGCCTTCACA+GGG 0.647921 1_1:+58962353 None:intergenic
AGGATGAGAAGAGATTGTAG+AGG 0.647969 1_1:+58962060 None:intergenic
ATAGCCTCCTATGAAGCATG+AGG 0.648961 1_1:-58965892 Msa0032040:five_prime_UTR
AATGACCATGTGGAATACAA+TGG 0.649000 1_1:-58964783 Msa0032040:CDS
TTGGACTCCAGAACTTCATG+AGG 0.657310 1_1:-58964037 Msa0032040:CDS
GAAAGTGACGTTATGTCCTG+GGG 0.673471 1_1:-58964858 Msa0032040:CDS
AAAACTATACGAGATAGGAA+GGG 0.678315 1_1:+58961987 None:intergenic
GGGTGGAAATGCCAAAACAA+CGG 0.682227 1_1:-58964748 Msa0032040:CDS
GTTTGAGCAACAGATGAAGT+CGG 0.685798 1_1:-58962643 Msa0032040:CDS
TGAGCGGACGTAAGAATACG+AGG 0.695025 1_1:+58966381 None:intergenic
CTCTTGCATCAAGAGAGAAG+GGG 0.697249 1_1:+58964167 None:intergenic
AGGGGATTACAGAAGCATTG+CGG 0.709657 1_1:-58962900 Msa0032040:CDS
AATTGATGCAGCCTGCATCG+AGG 0.729819 1_1:+58964989 None:intergenic
TCCCACCCAGAATGACCATG+TGG 0.730540 1_1:-58964793 Msa0032040:CDS
ATAGTGATCGAACCTTACGA+AGG 0.732118 1_1:+58966258 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGAAAAAAACAATTATTTT+GGG + chr1_1:58962501-58962520 None:intergenic 10.0%
!!! AAAGAAAAAAACAATTATTT+TGG + chr1_1:58962502-58962521 None:intergenic 10.0%
!! ATAAATATACAAAAAATATC+TGG + chr1_1:58966101-58966120 None:intergenic 10.0%
!!! AGATATTTTTTGTATATTTA+TGG - chr1_1:58966100-58966119 Msa0032040:intron 10.0%
!! AGCAAATAATAAAGAAAATT+GGG + chr1_1:58962606-58962625 None:intergenic 15.0%
!! AAGCAAATAATAAAGAAAAT+TGG + chr1_1:58962607-58962626 None:intergenic 15.0%
!!! ACATTTTTTTTTCTTTACTT+AGG - chr1_1:58964489-58964508 Msa0032040:intron 15.0%
!!! TTCTATATTTCTGAAATTAA+GGG + chr1_1:58964566-58964585 None:intergenic 15.0%
!! AAAACAATTATAGATAAGTA+GGG + chr1_1:58965118-58965137 None:intergenic 15.0%
!! AAAAACAATTATAGATAAGT+AGG + chr1_1:58965119-58965138 None:intergenic 15.0%
!! AAAATAATTGGTCCAAAAAA+TGG + chr1_1:58962368-58962387 None:intergenic 20.0%
!! GCATCTGAAAATAAAATAAT+TGG + chr1_1:58962380-58962399 None:intergenic 20.0%
!! ATTAATATATGTAGCAATAG+AGG - chr1_1:58962868-58962887 Msa0032040:CDS 20.0%
!! ATATAATACAGTAATTCCAA+AGG + chr1_1:58962966-58962985 None:intergenic 20.0%
!!! TTAAGTTGTTTATCTAATCA+AGG - chr1_1:58963180-58963199 Msa0032040:intron 20.0%
!! AATTGAAGAATATCTTCAAA+TGG + chr1_1:58963477-58963496 None:intergenic 20.0%
!!! GATTTTAATATTGTACTACA+AGG - chr1_1:58963701-58963720 Msa0032040:intron 20.0%
!!! GTTCTATATTTCTGAAATTA+AGG + chr1_1:58964567-58964586 None:intergenic 20.0%
!! ATATAAAGTTCATATAAACC+AGG - chr1_1:58964649-58964668 Msa0032040:CDS 20.0%
!! TTGCTTATTATTTATATCTG+TGG - chr1_1:58964672-58964691 Msa0032040:CDS 20.0%
!!! TTTCTTTTTATAGGCAAATA+CGG - chr1_1:58964761-58964780 Msa0032040:CDS 20.0%
!! TTAATAAGCACATACATAAT+TGG - chr1_1:58964952-58964971 Msa0032040:CDS 20.0%
!! AAACAATTATAGATAAGTAG+GGG + chr1_1:58965117-58965136 None:intergenic 20.0%
!! ACATTAATAACTGTACATAT+TGG + chr1_1:58965347-58965366 None:intergenic 20.0%
!! AATTTAGAAAACACAAATGA+AGG - chr1_1:58965732-58965751 Msa0032040:intron 20.0%
!! TTGTATATTTATGGAATGTT+TGG - chr1_1:58966109-58966128 Msa0032040:intron 20.0%
!! ATTTAGGGATTTATAAGTTA+TGG - chr1_1:58966178-58966197 Msa0032040:intron 20.0%
!! TTTAGGGATTTATAAGTTAT+GGG - chr1_1:58966179-58966198 Msa0032040:intron 20.0%
!! TTAACTTATTATGGGAAAAT+GGG + chr1_1:58966222-58966241 None:intergenic 20.0%
! TGCATAATGAAGAATGAATT+GGG + chr1_1:58961975-58961994 None:intergenic 25.0%
! ATGCATAATGAAGAATGAAT+TGG + chr1_1:58961976-58961995 None:intergenic 25.0%
! AGCAGAAAAATAAAACAGAT+TGG + chr1_1:58962106-58962125 None:intergenic 25.0%
! GTCAACAGTGTAAAAAATAT+AGG + chr1_1:58962897-58962916 None:intergenic 25.0%
!! ATTTTGTCCAATTGTATGAT+TGG - chr1_1:58962984-58963003 Msa0032040:intron 25.0%
!!! TTACTTTTCGTATTGAAATC+AGG - chr1_1:58963223-58963242 Msa0032040:CDS 25.0%
!! AAAAAACAAACCTGTGATTT+TGG + chr1_1:58963675-58963694 None:intergenic 25.0%
! TTCTAGTATTATTCACAGAT+AGG + chr1_1:58963743-58963762 None:intergenic 25.0%
! GTGAATAATACTAGAATATG+TGG - chr1_1:58963747-58963766 Msa0032040:intron 25.0%
! ATAATACTAGAATATGTGGA+TGG - chr1_1:58963751-58963770 Msa0032040:intron 25.0%
!!! TGCATTTAGGTTCTTTTTTT+AGG - chr1_1:58963934-58963953 Msa0032040:intron 25.0%
!! GGATAAGAAGTACAAAATAA+AGG + chr1_1:58964344-58964363 None:intergenic 25.0%
!! AGATTTTCCTTATTATCTCA+TGG - chr1_1:58964374-58964393 Msa0032040:intron 25.0%
! ATTAACACCATGAGATAATA+AGG + chr1_1:58964384-58964403 None:intergenic 25.0%
! GATATAAATAATAAGCAACC+TGG + chr1_1:58964670-58964689 None:intergenic 25.0%
!! GTTAAAATTTTGTCATTCAC+CGG - chr1_1:58964796-58964815 Msa0032040:CDS 25.0%
! TTGATTCATCCAAAACAAAT+TGG + chr1_1:58964985-58965004 None:intergenic 25.0%
! TCATCTTCCTTACAAAATAT+GGG + chr1_1:58965539-58965558 None:intergenic 25.0%
! AGTTATAATAACAGAGTACA+AGG + chr1_1:58965562-58965581 None:intergenic 25.0%
!! GTGTTTTCTAAATTTTCAAC+TGG + chr1_1:58965726-58965745 None:intergenic 25.0%
! ATATTTATGGAATGTTTGGA+TGG - chr1_1:58966113-58966132 Msa0032040:intron 25.0%
! TAACTTATTATGGGAAAATG+GGG + chr1_1:58966221-58966240 None:intergenic 25.0%
! GTTAACTTATTATGGGAAAA+TGG + chr1_1:58966223-58966242 None:intergenic 25.0%
! TGTAGAGGTTAACTTATTAT+GGG + chr1_1:58966230-58966249 None:intergenic 25.0%
! TTGTAGAGGTTAACTTATTA+TGG + chr1_1:58966231-58966250 None:intergenic 25.0%
! AAAAAGGAACATAGAGATTT+CGG + chr1_1:58966284-58966303 None:intergenic 25.0%
GCATAATGAAGAATGAATTG+GGG + chr1_1:58961974-58961993 None:intergenic 30.0%
TTTCACAAGTTCAGTGAATT+CGG + chr1_1:58962195-58962214 None:intergenic 30.0%
!! TTTTGCTCACTTCCATTTTT+TGG - chr1_1:58962353-58962372 Msa0032040:three_prime_UTR 30.0%
!! TCTTTTGTTTAACCACTCTT+TGG - chr1_1:58962517-58962536 Msa0032040:CDS 30.0%
TGACATATATTCAACGATTG+TGG + chr1_1:58962660-58962679 None:intergenic 30.0%
CAAAACAATGTTGATCAATG+AGG - chr1_1:58962678-58962697 Msa0032040:CDS 30.0%
TTTGATTACAACAGTCTAGA+AGG - chr1_1:58962717-58962736 Msa0032040:intron 30.0%
AGAAGGTTATAGACGATTAA+AGG - chr1_1:58962734-58962753 Msa0032040:intron 30.0%
AGACGATTAAAGGTCAAATA+CGG - chr1_1:58962744-58962763 Msa0032040:intron 30.0%
TTCATATTACCGATGAAGTA+CGG + chr1_1:58962936-58962955 None:intergenic 30.0%
TAATATGAACAAGTGACCTT+TGG - chr1_1:58962947-58962966 Msa0032040:intron 30.0%
TCAAATAAGACAAACCAAAC+AGG + chr1_1:58963045-58963064 None:intergenic 30.0%
ATCTACTGTTATAAGCTCTT+CGG - chr1_1:58963069-58963088 Msa0032040:intron 30.0%
CTTATTTCCATAAGTTCTTC+AGG - chr1_1:58963092-58963111 Msa0032040:intron 30.0%
! ACAAAGTTGATTGATTCATC+TGG - chr1_1:58963250-58963269 Msa0032040:CDS 30.0%
ATGATTCTATTCAGCCAAAT+TGG - chr1_1:58963616-58963635 Msa0032040:intron 30.0%
TTATGATGCACATGAAAATC+AGG - chr1_1:58963835-58963854 Msa0032040:intron 30.0%
TAATGTAACTAGCTAGTTGT+GGG - chr1_1:58963883-58963902 Msa0032040:CDS 30.0%
ATACTATACTTACATGCAGA+TGG + chr1_1:58963987-58964006 None:intergenic 30.0%
AAACGGTTAAGATACATACA+GGG + chr1_1:58964028-58964047 None:intergenic 30.0%
AAATAACAGTAGGTCTCAAA+CGG + chr1_1:58964045-58964064 None:intergenic 30.0%
GTTAAGCGAAAAATAACAGT+AGG + chr1_1:58964055-58964074 None:intergenic 30.0%
AGATCATTAACTTCTTTGGA+TGG + chr1_1:58964197-58964216 None:intergenic 30.0%
AGGAAGATCATTAACTTCTT+TGG + chr1_1:58964201-58964220 None:intergenic 30.0%
AAGGAAAATCTGTAATGAGA+AGG + chr1_1:58964365-58964384 None:intergenic 30.0%
TTGAACTTGATGAAAGTTGA+GGG - chr1_1:58964430-58964449 Msa0032040:intron 30.0%
! TTTTCACATGATAGATGGTA+AGG + chr1_1:58964456-58964475 None:intergenic 30.0%
AAAAAAAATGTACCTGCAGA+TGG + chr1_1:58964480-58964499 None:intergenic 30.0%
TTTACTTAGGAGCTTCTTTA+TGG - chr1_1:58964502-58964521 Msa0032040:intron 30.0%
TTACTTAGGAGCTTCTTTAT+GGG - chr1_1:58964503-58964522 Msa0032040:intron 30.0%
AAGGTATGTGCAAGTTTATA+CGG - chr1_1:58964613-58964632 Msa0032040:intron 30.0%
TCACAAACAAAACATCTTAC+TGG + chr1_1:58964732-58964751 None:intergenic 30.0%
AAACGGAAATACATAACAAC+TGG + chr1_1:58964869-58964888 None:intergenic 30.0%
GAAGCATGAACATTGAAAAA+CGG + chr1_1:58964886-58964905 None:intergenic 30.0%
! TTATTTCTCCTGTTCTCTTT+AGG - chr1_1:58964927-58964946 Msa0032040:CDS 30.0%
TATTTCTCCTGTTCTCTTTA+GGG - chr1_1:58964928-58964947 Msa0032040:CDS 30.0%
TATTAAACCCTAAAGAGAAC+AGG + chr1_1:58964938-58964957 None:intergenic 30.0%
TTGGATGAATCAAAGAATAG+TGG - chr1_1:58964992-58965011 Msa0032040:CDS 30.0%
!!! CACGTTTTTAAGTCTATAGA+CGG + chr1_1:58965086-58965105 None:intergenic 30.0%
ATTATAGATAAGTAGGGGAT+GGG + chr1_1:58965112-58965131 None:intergenic 30.0%
AATTATAGATAAGTAGGGGA+TGG + chr1_1:58965113-58965132 None:intergenic 30.0%
TATAACCTATGAAAAAGACG+TGG - chr1_1:58965259-58965278 Msa0032040:intron 30.0%
TAGTAAACACTAGATCTGTT+CGG + chr1_1:58965298-58965317 None:intergenic 30.0%
! TTAACTCCCCATATTTTGTA+AGG - chr1_1:58965529-58965548 Msa0032040:intron 30.0%
CATCTTCCTTACAAAATATG+GGG + chr1_1:58965538-58965557 None:intergenic 30.0%
GTCATCTTCCTTACAAAATA+TGG + chr1_1:58965540-58965559 None:intergenic 30.0%
AATGAAGGTCACGAAAAAAT+TGG - chr1_1:58965747-58965766 Msa0032040:intron 30.0%
CACGAAAAAATTGGAATCAA+TGG - chr1_1:58965756-58965775 Msa0032040:intron 30.0%
GTCATAGTCAAAAACAGAAA+GGG + chr1_1:58966004-58966023 None:intergenic 30.0%
AGTCATAGTCAAAAACAGAA+AGG + chr1_1:58966005-58966024 None:intergenic 30.0%
! TGAAACCAAATCACTGATTA+AGG + chr1_1:58966029-58966048 None:intergenic 30.0%
! ACTTAGGGTATAATTTGCAT+TGG - chr1_1:58966064-58966083 Msa0032040:intron 30.0%
GGATGTTTCAACTGTATTTA+GGG - chr1_1:58966163-58966182 Msa0032040:intron 30.0%
AAAACTATACGAGATAGGAA+GGG + chr1_1:58966318-58966337 None:intergenic 30.0%
TAAAACTATACGAGATAGGA+AGG + chr1_1:58966319-58966338 None:intergenic 30.0%
GTGATAAAACTATACGAGAT+AGG + chr1_1:58966323-58966342 None:intergenic 30.0%
!!! ATGAATGCTTGTTTTGCAAG+TGG + chr1_1:58962323-58962342 None:intergenic 35.0%
GTCTGACACTAATATGATGT+TGG - chr1_1:58962448-58962467 Msa0032040:CDS 35.0%
! TGTTTAACCACTCTTTGGAA+TGG - chr1_1:58962522-58962541 Msa0032040:CDS 35.0%
ATGATCGCCAATCATACAAT+TGG + chr1_1:58962994-58963013 None:intergenic 35.0%
AAGCTATCCTGAAGAACTTA+TGG + chr1_1:58963102-58963121 None:intergenic 35.0%
! AATTCCAACATCAGAAGTGT+TGG - chr1_1:58963336-58963355 Msa0032040:intron 35.0%
!! TTTCTGAAGCAGAGGAAAAA+TGG + chr1_1:58963401-58963420 None:intergenic 35.0%
!! AGAATGTATTTCTGAAGCAG+AGG + chr1_1:58963409-58963428 None:intergenic 35.0%
! ACATAACGTCACTTTCTTGA+GGG + chr1_1:58963440-58963459 None:intergenic 35.0%
AATGACCATGTGGAATACAA+TGG - chr1_1:58963519-58963538 Msa0032040:intron 35.0%
!! ATACAATGGTTCTGAAGTCT+TGG - chr1_1:58963533-58963552 Msa0032040:intron 35.0%
!! TACAATGGTTCTGAAGTCTT+GGG - chr1_1:58963534-58963553 Msa0032040:intron 35.0%
CCAAATTGGAATGAACTTCT+CGG - chr1_1:58963630-58963649 Msa0032040:intron 35.0%
TATGACAGAACCAAAATCAC+AGG - chr1_1:58963662-58963681 Msa0032040:intron 35.0%
CATGTGCATCATAAACTAGT+CGG + chr1_1:58963829-58963848 None:intergenic 35.0%
GTAATGTAACTAGCTAGTTG+TGG - chr1_1:58963882-58963901 Msa0032040:CDS 35.0%
!! TGATTTGCTTTGGTGCATTT+AGG - chr1_1:58963921-58963940 Msa0032040:intron 35.0%
CAAACGGTTAAGATACATAC+AGG + chr1_1:58964029-58964048 None:intergenic 35.0%
! CTCATGGTGTTAATATGTAG+AGG - chr1_1:58964390-58964409 Msa0032040:intron 35.0%
CTTGAACTTGATGAAAGTTG+AGG - chr1_1:58964429-58964448 Msa0032040:intron 35.0%
! ATGGCTTTTCACATGATAGA+TGG + chr1_1:58964461-58964480 None:intergenic 35.0%
!!! TATGGGTGTGTTTTAATCGA+AGG - chr1_1:58964520-58964539 Msa0032040:intron 35.0%
TTCAGAAATATAGAACTGCC+AGG - chr1_1:58964571-58964590 Msa0032040:intron 35.0%
TACAAACCAGAATCATCAGA+AGG - chr1_1:58964594-58964613 Msa0032040:intron 35.0%
ACATCTTACTGGAGACATTA+CGG + chr1_1:58964721-58964740 None:intergenic 35.0%
TGTTAAAGGAGTTGAAGGAT+CGG + chr1_1:58964832-58964851 None:intergenic 35.0%
TCCTTCAACTCCTTTAACAT+TGG - chr1_1:58964833-58964852 Msa0032040:CDS 35.0%
CCTTCAACTCCTTTAACATT+GGG - chr1_1:58964834-58964853 Msa0032040:CDS 35.0%
AACTCCTTTAACATTGGGAT+AGG - chr1_1:58964839-58964858 Msa0032040:CDS 35.0%
TTTGCCTATCCCAATGTTAA+AGG + chr1_1:58964846-58964865 None:intergenic 35.0%
!! GGATATGCACCAATTTGTTT+TGG - chr1_1:58964973-58964992 Msa0032040:CDS 35.0%
ATTGAAGTCAACTTCTTCTC+TGG + chr1_1:58965053-58965072 None:intergenic 35.0%
CAATTGAGAGATGTCATTGT+TGG + chr1_1:58965168-58965187 None:intergenic 35.0%
ATATTGGAAACGAGGACAAT+AGG + chr1_1:58965331-58965350 None:intergenic 35.0%
AACTGTACATATTGGAAACG+AGG + chr1_1:58965339-58965358 None:intergenic 35.0%
ATTAATGTCTAGAGACGCTT+TGG - chr1_1:58965359-58965378 Msa0032040:intron 35.0%
AGATTCAGATTGAGAACCAA+GGG - chr1_1:58965619-58965638 Msa0032040:intron 35.0%
AATACAAGCACAGAGCAAAA+GGG - chr1_1:58965816-58965835 Msa0032040:intron 35.0%
AAATACTAGATGCCTTCACA+GGG + chr1_1:58965952-58965971 None:intergenic 35.0%
GACTTCCTTAATCAGTGATT+TGG - chr1_1:58966021-58966040 Msa0032040:intron 35.0%
GGGATGTTTCAACTGTATTT+AGG - chr1_1:58966162-58966181 Msa0032040:intron 35.0%
TCGGAAGTTTACTTCTCAAA+AGG + chr1_1:58966265-58966284 None:intergenic 35.0%
TGCTTACTTTATTCTCGTGT+TGG - chr1_1:58966368-58966387 Msa0032040:five_prime_UTR 35.0%
TATTCTTACGTCCGCTCATT+CGG - chr1_1:58961926-58961945 Msa0032040:three_prime_UTR 40.0%
CTTCTTCTTCTTCCTTCGTA+AGG - chr1_1:58962032-58962051 Msa0032040:three_prime_UTR 40.0%
ATAGTGATCGAACCTTACGA+AGG + chr1_1:58962047-58962066 None:intergenic 40.0%
ATAGGAGGCTATAAGCTTCT+AGG + chr1_1:58962402-58962421 None:intergenic 40.0%
TAATCCTCATGCTTCATAGG+AGG + chr1_1:58962417-58962436 None:intergenic 40.0%
TCCTATGAAGCATGAGGATT+AGG - chr1_1:58962416-58962435 Msa0032040:CDS 40.0%
GTTATACGAGTGTGTCATAC+AGG + chr1_1:58962557-58962576 None:intergenic 40.0%
GATACACCATAGACATTCCT+TGG - chr1_1:58962628-58962647 Msa0032040:CDS 40.0%
ATGTGTCCAAGGAATGTCTA+TGG + chr1_1:58962637-58962656 None:intergenic 40.0%
CGATTAAAGGTCAAATACGG+TGG - chr1_1:58962747-58962766 Msa0032040:intron 40.0%
AATAGACGAAGACATAGCTC+TGG + chr1_1:58963286-58963305 None:intergenic 40.0%
GAGGAAAAATGGACGTTATC+AGG + chr1_1:58963390-58963409 None:intergenic 40.0%
! GACATAACGTCACTTTCTTG+AGG + chr1_1:58963441-58963460 None:intergenic 40.0%
AAGAAAGTGACGTTATGTCC+TGG - chr1_1:58963442-58963461 Msa0032040:intron 40.0%
AGAAAGTGACGTTATGTCCT+GGG - chr1_1:58963443-58963462 Msa0032040:intron 40.0%
GTATTCCACATGGTCATTCT+GGG + chr1_1:58963517-58963536 None:intergenic 40.0%
TGTATTCCACATGGTCATTC+TGG + chr1_1:58963518-58963537 None:intergenic 40.0%
CAGAACCATTGTATTCCACA+TGG + chr1_1:58963527-58963546 None:intergenic 40.0%
! TGCCAAAACAACGGATTTCA+AGG - chr1_1:58963563-58963582 Msa0032040:intron 40.0%
! CTCCTTGAAATCCGTTGTTT+TGG + chr1_1:58963568-58963587 None:intergenic 40.0%
! AAACAACGGATTTCAAGGAG+TGG - chr1_1:58963568-58963587 Msa0032040:intron 40.0%
! AACAACGGATTTCAAGGAGT+GGG - chr1_1:58963569-58963588 Msa0032040:intron 40.0%
CCGAGAAGTTCATTCCAATT+TGG + chr1_1:58963633-58963652 None:intergenic 40.0%
CTAGAATATGTGGATGGCAT+TGG - chr1_1:58963757-58963776 Msa0032040:intron 40.0%
TGGCATCTTGTTCCTCTATA+TGG - chr1_1:58963777-58963796 Msa0032040:intron 40.0%
CTTGTTCCTCTATATGGTTG+AGG - chr1_1:58963783-58963802 Msa0032040:intron 40.0%
CACATGAAAATCAGGTCAAG+TGG - chr1_1:58963843-58963862 Msa0032040:CDS 40.0%
GAAAATCAGGTCAAGTGGTA+TGG - chr1_1:58963848-58963867 Msa0032040:CDS 40.0%
ATGCACCAAAGCAAATCATG+CGG + chr1_1:58963919-58963938 None:intergenic 40.0%
TAAGATACATACAGGGCAAG+AGG + chr1_1:58964021-58964040 None:intergenic 40.0%
TCTCTTGCATCAAGAGAGAA+GGG + chr1_1:58964139-58964158 None:intergenic 40.0%
GTAGTCGACACAGAAGAATT+AGG + chr1_1:58964221-58964240 None:intergenic 40.0%
AATCTAAGCCTAGAATGCGT+TGG - chr1_1:58964246-58964265 Msa0032040:intron 40.0%
ATATGTAGAGGCTACTCCTA+AGG - chr1_1:58964402-58964421 Msa0032040:intron 40.0%
TATGTAGAGGCTACTCCTAA+GGG - chr1_1:58964403-58964422 Msa0032040:intron 40.0%
ATCAAGTTCAAGACACCCTT+AGG + chr1_1:58964421-58964440 None:intergenic 40.0%
!! TGATGATTCTGGTTTGTACC+TGG + chr1_1:58964592-58964611 None:intergenic 40.0%
CACATACCTTCTGATGATTC+TGG + chr1_1:58964603-58964622 None:intergenic 40.0%
GTATGTGCAAGTTTATACGG+AGG - chr1_1:58964616-58964635 Msa0032040:intron 40.0%
CATCTTACTGGAGACATTAC+GGG + chr1_1:58964720-58964739 None:intergenic 40.0%
TTAAAGGAGTTGAAGGATCG+GGG + chr1_1:58964830-58964849 None:intergenic 40.0%
GTTAAAGGAGTTGAAGGATC+GGG + chr1_1:58964831-58964850 None:intergenic 40.0%
CCCAATGTTAAAGGAGTTGA+AGG + chr1_1:58964837-58964856 None:intergenic 40.0%
!!! ACATTTTTTTCCCTGCCTAC+AGG - chr1_1:58965023-58965042 Msa0032040:exon 40.0%
!! TTCTTCTCTGGAATTCCTGT+AGG + chr1_1:58965041-58965060 None:intergenic 40.0%
!! TTAGGCCACGTCTTTTTCAT+AGG + chr1_1:58965267-58965286 None:intergenic 40.0%
! ATCTGTTCGGCTCAGTTTTT+AGG + chr1_1:58965285-58965304 None:intergenic 40.0%
! GCTTTGGATTGTGGTTGTAT+AGG - chr1_1:58965375-58965394 Msa0032040:intron 40.0%
ATTGTGGTTGTATAGGCCTA+AGG - chr1_1:58965382-58965401 Msa0032040:intron 40.0%
TTGTGGTTGTATAGGCCTAA+GGG - chr1_1:58965383-58965402 Msa0032040:intron 40.0%
AATGCTTCTGTAATCCCCTT+AGG + chr1_1:58965401-58965420 None:intergenic 40.0%
AGATCACACAGAAAACACAG+TGG + chr1_1:58965490-58965509 None:intergenic 40.0%
TCTGTGTGATCTTTGTGTGA+AGG - chr1_1:58965498-58965517 Msa0032040:intron 40.0%
CAGATTCAGATTGAGAACCA+AGG - chr1_1:58965618-58965637 Msa0032040:intron 40.0%
GTTTGAGCAACAGATGAAGT+CGG - chr1_1:58965659-58965678 Msa0032040:intron 40.0%
TTGCTCTGTGCTTGTATTCT+GGG + chr1_1:58965814-58965833 None:intergenic 40.0%
TTTGCTCTGTGCTTGTATTC+TGG + chr1_1:58965815-58965834 None:intergenic 40.0%
GAATACAAGCACAGAGCAAA+AGG - chr1_1:58965815-58965834 Msa0032040:intron 40.0%
! TCAGTCTTCACTCGTTTTGT+GGG + chr1_1:58965900-58965919 None:intergenic 40.0%
AAGAATTTCCAACCCTGTGA+AGG - chr1_1:58965937-58965956 Msa0032040:intron 40.0%
GAAATACTAGATGCCTTCAC+AGG + chr1_1:58965953-58965972 None:intergenic 40.0%
TGCTTCTACATACAACATGC+TGG - chr1_1:58965973-58965992 Msa0032040:intron 40.0%
ACATTTCTTGTCCTCGACTT+AGG - chr1_1:58966048-58966067 Msa0032040:intron 40.0%
CATTTCTTGTCCTCGACTTA+GGG - chr1_1:58966049-58966068 Msa0032040:intron 40.0%
GCAAATTATACCCTAAGTCG+AGG + chr1_1:58966062-58966081 None:intergenic 40.0%
!! TAGAAGCATTGTTGGATCGA+GGG - chr1_1:58966142-58966161 Msa0032040:intron 40.0%
AGGATGAGAAGAGATTGTAG+AGG + chr1_1:58966245-58966264 None:intergenic 40.0%
AAGGGAGATCAAAGGGAAAA+AGG + chr1_1:58966300-58966319 None:intergenic 40.0%
AGATAGGAAGGGAGATCAAA+GGG + chr1_1:58966307-58966326 None:intergenic 40.0%
ATAGCCTCCTATGAAGCATG+AGG - chr1_1:58962410-58962429 Msa0032040:CDS 45.0%
GCCTAATCCTCATGCTTCAT+AGG + chr1_1:58962420-58962439 None:intergenic 45.0%
ACACACTCGTATAACACGTG+TGG - chr1_1:58962562-58962581 Msa0032040:CDS 45.0%
CACACTCGTATAACACGTGT+GGG - chr1_1:58962563-58962582 Msa0032040:CDS 45.0%
AACGATTGTGGATGTGTCCA+AGG + chr1_1:58962648-58962667 None:intergenic 45.0%
TGTCGTAGTCCGTACTTCAT+CGG - chr1_1:58962924-58962943 Msa0032040:intron 45.0%
CATTAGCGTTTGAGCCTGTT+TGG - chr1_1:58963028-58963047 Msa0032040:intron 45.0%
GTGTCCAACACTTCTGATGT+TGG + chr1_1:58963343-58963362 None:intergenic 45.0%
ATGGACGTTATCAGGCTGTT+CGG + chr1_1:58963382-58963401 None:intergenic 45.0%
GAAAGTGACGTTATGTCCTG+GGG - chr1_1:58963444-58963463 Msa0032040:intron 45.0%
TTCAAATGGATCAGTTCCCC+AGG + chr1_1:58963463-58963482 None:intergenic 45.0%
TTCTGGGTGGGAACATTATC+AGG + chr1_1:58963501-58963520 None:intergenic 45.0%
!! AATGGTTCTGAAGTCTTGGG+TGG - chr1_1:58963537-58963556 Msa0032040:intron 45.0%
GGGTGGAAATGCCAAAACAA+CGG - chr1_1:58963554-58963573 Msa0032040:intron 45.0%
CACGATCCTCAACCATATAG+AGG + chr1_1:58963792-58963811 None:intergenic 45.0%
CTCTATATGGTTGAGGATCG+TGG - chr1_1:58963790-58963809 Msa0032040:intron 45.0%
ATACAGGGCAAGAGGAAAGA+GGG + chr1_1:58964013-58964032 None:intergenic 45.0%
CTCTTGCATCAAGAGAGAAG+GGG + chr1_1:58964138-58964157 None:intergenic 45.0%
GTCTCTTGCATCAAGAGAGA+AGG + chr1_1:58964140-58964159 None:intergenic 45.0%
ATACTGCTGCTGTGAAACCT+GGG + chr1_1:58964162-58964181 None:intergenic 45.0%
TATACTGCTGCTGTGAAACC+TGG + chr1_1:58964163-58964182 None:intergenic 45.0%
CATTCTAGGCTTAGATTGCG+AGG + chr1_1:58964243-58964262 None:intergenic 45.0%
TTGGACTCCAGAACTTCATG+AGG - chr1_1:58964265-58964284 Msa0032040:intron 45.0%
ACAAAGGCCTCATGAAGTTC+TGG + chr1_1:58964275-58964294 None:intergenic 45.0%
AGAACTTCATGAGGCCTTTG+TGG - chr1_1:58964274-58964293 Msa0032040:intron 45.0%
CTGATTGACTGCTTCCACAA+AGG + chr1_1:58964291-58964310 None:intergenic 45.0%
TCATGTGAAAAGCCATCTGC+AGG - chr1_1:58964465-58964484 Msa0032040:intron 45.0%
! TCTAGAGACGCTTTGGATTG+TGG - chr1_1:58965366-58965385 Msa0032040:intron 45.0%
TGTGGTTGTATAGGCCTAAG+GGG - chr1_1:58965384-58965403 Msa0032040:intron 45.0%
!! AGGGGATTACAGAAGCATTG+CGG - chr1_1:58965402-58965421 Msa0032040:intron 45.0%
TCATCTGTAGATGCTTCCCT+TGG + chr1_1:58965638-58965657 None:intergenic 45.0%
!! ACACTTGATAGTGGAGCAGA+AGG + chr1_1:58965690-58965709 None:intergenic 45.0%
TTCTGCTCCACTATCAAGTG+TGG - chr1_1:58965689-58965708 Msa0032040:intron 45.0%
GATAGTGCCACACTTGATAG+TGG + chr1_1:58965699-58965718 None:intergenic 45.0%
ACTTCAGACAACATGCCTGA+AGG - chr1_1:58965783-58965802 Msa0032040:intron 45.0%
! GTATTCTGGGAACTTCCTTC+AGG + chr1_1:58965801-58965820 None:intergenic 45.0%
GGAGATGATGCTAAAGCTAC+CGG - chr1_1:58965837-58965856 Msa0032040:intron 45.0%
! GTCAGTCTTCACTCGTTTTG+TGG + chr1_1:58965901-58965920 None:intergenic 45.0%
!! GGAGCTTCTAGAAGCATTGT+TGG - chr1_1:58966134-58966153 Msa0032040:intron 45.0%
!! CTAGAAGCATTGTTGGATCG+AGG - chr1_1:58966141-58966160 Msa0032040:intron 45.0%
GAGATAGGAAGGGAGATCAA+AGG + chr1_1:58966308-58966327 None:intergenic 45.0%
!!! AATTAATTATTTTAATGAAT+AGG - chr1_1:58964100-58964119 Msa0032040:CDS 5.0%
!!! TATTTAATTTTTCTTTTTAT+AGG - chr1_1:58964752-58964771 Msa0032040:CDS 5.0%
TGAGCGGACGTAAGAATACG+AGG + chr1_1:58961924-58961943 None:intergenic 50.0%
TCGGACACCATTCCAAAGAG+TGG + chr1_1:58962532-58962551 None:intergenic 50.0%
CGAGTGTGTCATACAGGTGT+CGG + chr1_1:58962551-58962570 None:intergenic 50.0%
!! GAAGACATAGCTCTGGTCGA+AGG + chr1_1:58963279-58963298 None:intergenic 50.0%
TATTCCCTCTTCCTCGATGC+AGG - chr1_1:58963302-58963321 Msa0032040:intron 50.0%
AATTGATGCAGCCTGCATCG+AGG + chr1_1:58963316-58963335 None:intergenic 50.0%
GTTATCAGGCTGTTCGGAAG+GGG + chr1_1:58963376-58963395 None:intergenic 50.0%
CGTTATCAGGCTGTTCGGAA+GGG + chr1_1:58963377-58963396 None:intergenic 50.0%
ACGTTATCAGGCTGTTCGGA+AGG + chr1_1:58963378-58963397 None:intergenic 50.0%
TCCACATGGTCATTCTGGGT+GGG + chr1_1:58963513-58963532 None:intergenic 50.0%
TTCCACATGGTCATTCTGGG+TGG + chr1_1:58963514-58963533 None:intergenic 50.0%
CATACAGGGCAAGAGGAAAG+AGG + chr1_1:58964014-58964033 None:intergenic 50.0%
TCTCTTGATGCAAGAGACCC+AGG - chr1_1:58964142-58964161 Msa0032040:CDS 50.0%
! TCTGGAGTCCAACGCATTCT+AGG + chr1_1:58964257-58964276 None:intergenic 50.0%
GTGGAAGCAGTCAATCAGCT+TGG - chr1_1:58964293-58964312 Msa0032040:intron 50.0%
GAAGCAGTCAATCAGCTTGG+TGG - chr1_1:58964296-58964315 Msa0032040:intron 50.0%
AAGGATCGGGGTTCAAACTC+CGG + chr1_1:58964818-58964837 None:intergenic 50.0%
!! CTCTGGAATTCCTGTAGGCA+GGG + chr1_1:58965036-58965055 None:intergenic 50.0%
!! TCTCTGGAATTCCTGTAGGC+AGG + chr1_1:58965037-58965056 None:intergenic 50.0%
TGCAGATGGAACTCCAGAAG+CGG - chr1_1:58965426-58965445 Msa0032040:intron 50.0%
GTTGTTCATGAAGCCGCTTC+TGG + chr1_1:58965442-58965461 None:intergenic 50.0%
GCGGCTTCATGAACAACTTG+AGG - chr1_1:58965445-58965464 Msa0032040:intron 50.0%
TTCTCCCAGCTCAAGTTCAC+CGG + chr1_1:58965859-58965878 None:intergenic 50.0%
! GTCTTCACTCGTTTTGTGGG+TGG + chr1_1:58965897-58965916 None:intergenic 50.0%
ACTAGATGCCTTCACAGGGT+TGG + chr1_1:58965948-58965967 None:intergenic 50.0%
TGCCTCATGAGCCGAATGAG+CGG + chr1_1:58961940-58961959 None:intergenic 55.0%
TCCCACCCAGAATGACCATG+TGG - chr1_1:58963509-58963528 Msa0032040:intron 55.0%
!! GAGCGCCGCATGATTTGCTT+TGG - chr1_1:58963911-58963930 Msa0032040:intron 55.0%
!! AGAAGCATTGCGGCTGCAGA+TGG - chr1_1:58965412-58965431 Msa0032040:intron 55.0%
AGCTACCGGTGAACTTGAGC+TGG - chr1_1:58965851-58965870 Msa0032040:intron 55.0%
GCTACCGGTGAACTTGAGCT+GGG - chr1_1:58965852-58965871 Msa0032040:intron 55.0%
TTGTGGGTGGTGCGGTAAGT+TGG + chr1_1:58965884-58965903 None:intergenic 55.0%
! CACTCGTTTTGTGGGTGGTG+CGG + chr1_1:58965892-58965911 None:intergenic 55.0%
GTCCGCTCATTCGGCTCATG+AGG - chr1_1:58961935-58961954 Msa0032040:three_prime_UTR 60.0%
GCAGCCTGCATCGAGGAAGA+GGG + chr1_1:58963309-58963328 None:intergenic 60.0%
TGCAGCCTGCATCGAGGAAG+AGG + chr1_1:58963310-58963329 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 58961906 58966418 58961906 ID=Msa0032040;Name=Msa0032040
chr1_1 mRNA 58961906 58966418 58961906 ID=Msa0032040-mRNA-1;Parent=Msa0032040;Name=Msa0032040-mRNA-1;_AED=0.20;_eAED=0.20;_QI=268|1|1|1|0.75|0.66|9|492|388
chr1_1 exon 58961906 58962721 58961906 ID=Msa0032040-mRNA-1:exon:18108;Parent=Msa0032040-mRNA-1
chr1_1 exon 58962858 58962927 58962858 ID=Msa0032040-mRNA-1:exon:18107;Parent=Msa0032040-mRNA-1
chr1_1 exon 58963222 58963279 58963222 ID=Msa0032040-mRNA-1:exon:18106;Parent=Msa0032040-mRNA-1
chr1_1 exon 58963709 58963748 58963709 ID=Msa0032040-mRNA-1:exon:18105;Parent=Msa0032040-mRNA-1
chr1_1 exon 58963838 58963914 58963838 ID=Msa0032040-mRNA-1:exon:18104;Parent=Msa0032040-mRNA-1
chr1_1 exon 58963998 58964202 58963998 ID=Msa0032040-mRNA-1:exon:18103;Parent=Msa0032040-mRNA-1
chr1_1 exon 58964641 58965079 58964641 ID=Msa0032040-mRNA-1:exon:18102;Parent=Msa0032040-mRNA-1
chr1_1 exon 58965855 58965928 58965855 ID=Msa0032040-mRNA-1:exon:18101;Parent=Msa0032040-mRNA-1
chr1_1 exon 58966271 58966418 58966271 ID=Msa0032040-mRNA-1:exon:18100;Parent=Msa0032040-mRNA-1
chr1_1 five_prime_UTR 58966271 58966418 58966271 ID=Msa0032040-mRNA-1:five_prime_utr;Parent=Msa0032040-mRNA-1
chr1_1 five_prime_UTR 58965855 58965928 58965855 ID=Msa0032040-mRNA-1:five_prime_utr;Parent=Msa0032040-mRNA-1
chr1_1 five_prime_UTR 58965034 58965079 58965034 ID=Msa0032040-mRNA-1:five_prime_utr;Parent=Msa0032040-mRNA-1
chr1_1 CDS 58964641 58965033 58964641 ID=Msa0032040-mRNA-1:cds;Parent=Msa0032040-mRNA-1
chr1_1 CDS 58963998 58964202 58963998 ID=Msa0032040-mRNA-1:cds;Parent=Msa0032040-mRNA-1
chr1_1 CDS 58963838 58963914 58963838 ID=Msa0032040-mRNA-1:cds;Parent=Msa0032040-mRNA-1
chr1_1 CDS 58963709 58963748 58963709 ID=Msa0032040-mRNA-1:cds;Parent=Msa0032040-mRNA-1
chr1_1 CDS 58963222 58963279 58963222 ID=Msa0032040-mRNA-1:cds;Parent=Msa0032040-mRNA-1
chr1_1 CDS 58962858 58962927 58962858 ID=Msa0032040-mRNA-1:cds;Parent=Msa0032040-mRNA-1
chr1_1 CDS 58962398 58962721 58962398 ID=Msa0032040-mRNA-1:cds;Parent=Msa0032040-mRNA-1
chr1_1 three_prime_UTR 58961906 58962397 58961906 ID=Msa0032040-mRNA-1:three_prime_utr;Parent=Msa0032040-mRNA-1
Gene Sequence

>Msa0032040

ATGTCTTCGTCTATTCCCTCTTCCTCGATGCAGGCTGCATCAATTAATTCCAACATCAGAAGTGTTGGACACATGTTTTCAACCCCTTCCGAACAGCCTGATAACGTCCATTTTTCCTCTGCTTCAGAAATACATTCTATGACATTCCCTCAAGAAAGTGACGTTATGTCCTGGGGAACTGATCCATTTGAAGATATTCTTCAATTTCCTGATAATGTTCCCACCCAGAATGACCATGTGGAATACAATGGTTCTGAAGTCTTGGGTGGAAATGCCAAAACAACGGATTTCAAGGAGTGGGTTGATCAGTTGATGTCAGTCGATGATGATTCTATTCAGCCAAATTGGAATGAACTTCTCGGTGATAACAATATGACAGAACCAAAATCACAGGATGCACAAATGTCCCCTTCTCTCTTGATGCAAGAGACCCAGGTTTCACAGCAGCAGTATATACTATCACTACCATCCAAAGAAGTTAATGATCTTCCTAATTCTTCTGTGTCGACTACCTCGCAATCTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAGGCCTTTGTGGAAGCAGTCAATCAGCTTGGTGGTAGTGAGAAGGCTACTCCTAAGGGTGTCTTGAACTTGATGAAAGTTGAGGGCCTTACCATCTATCATGTGAAAAGCCATCTGCAGAAATATAGAACTGCCAGGTACAAACCAGAATCATCAGAAGGAATTCCAGAGAAGAAGTTGACTTCAATCGACGAAATGCCGTCTATAGACTTAAAAACGCCTAAGGGGATTACAGAAGCATTGCGGCTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAATTTACAGATTCAGATTGAGAACCAAGGGAAGCATCTACAGATGATGTTTGAGCAACAGATGAAGTCGGATGAGCCTTCTGCTCCACTATCAAGTGTGGCACTATCTTCTCCAGTTGAAAATTTAGAAAACACAAATGAAGGTCACGAAAAAATTGGAATCAATGGCAGCACTTCAGACAACATGCCTGAAGGAAGTTCCCAGAATACAAGCACAGAGCAAAAGGGAGATGATGCTAAAGCTACCGGTGAACTTGAGCTGGGAGAAGACCAACTTACCGCACCACCCACAAAACGAGTGAAGACTGACAAGTAG
Protein sequence

>Msa0032040

MSSSIPSSSMQAASINSNIRSVGHMFSTPSEQPDNVHFSSASEIHSMTFPQESDVMSWGTDPFEDILQFPDNVPTQNDHVEYNGSEVLGGNAKTTDFKEWVDQLMSVDDDSIQPNWNELLGDNNMTEPKSQDAQMSPSLLMQETQVSQQQYILSLPSKEVNDLPNSSVSTTSQSKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARYKPESSEGIPEKKLTSIDEMPSIDLKTPKGITEALRLQMELQKRLHEQLEIQRNLQIQIENQGKHLQMMFEQQMKSDEPSAPLSSVALSSPVENLENTNEGHEKIGINGSTSDNMPEGSSQNTSTEQKGDDAKATGELELGEDQLTAPPTKRVKTDK*