AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1354370


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 100 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTTCATGGTTCGATATTC+TGG 0.185586 tig0014543:+175613 None:intergenic
TGCACGCCTCCGTTACCTTT+TGG 0.196515 tig0014543:-174672 Msa1354370:CDS
CTGTTCCCTGGGATTGGCTT+TGG 0.228349 tig0014543:+174488 None:intergenic
CAGCTCACGTACCGCTTTAA+TGG 0.245260 tig0014543:-174967 Msa1354370:CDS
TGTTCCCTGGGATTGGCTTT+GGG 0.270024 tig0014543:+174489 None:intergenic
TCATGCCTTTACTTCGTTCA+TGG 0.272664 tig0014543:+175600 None:intergenic
GGCTGTGATACCGGAGGCTC+TGG 0.279951 tig0014543:-175213 Msa1354370:CDS
TCTCAGGTAGACAGTTTCTA+TGG 0.287253 tig0014543:+174637 None:intergenic
GGCAAAGAAGGCCTCCTTCC+GGG 0.289862 tig0014543:+174537 None:intergenic
TCTAACGCCCACACCGGATA+TGG 0.325084 tig0014543:-175018 Msa1354370:CDS
CAGAGAACCCATCGCTGTTT+CGG 0.333458 tig0014543:-175234 Msa1354370:CDS
AGGGAACAGTGAAGCTTCAT+AGG 0.345840 tig0014543:-174474 None:intergenic
TCCTCGGGCCAGACGGAGAT+TGG 0.349112 tig0014543:+174701 None:intergenic
TCCCGTCGATGTGAGCTCTT+GGG 0.355274 tig0014543:-174873 Msa1354370:CDS
GCTTCACTGTTCCCTGGGAT+TGG 0.355814 tig0014543:+174482 None:intergenic
AGGCAAAGAAGGCCTCCTTC+CGG 0.382980 tig0014543:+174536 None:intergenic
AAAGTTACTCTAGGGATAAC+AGG 0.383241 tig0014543:+174841 None:intergenic
CATTAAAGCGGTACGTGAGC+TGG 0.384796 tig0014543:+174968 None:intergenic
TTCCCGTCGATGTGAGCTCT+TGG 0.386490 tig0014543:-174874 Msa1354370:CDS
AGCTCACGTACCGCTTTAAT+GGG 0.395506 tig0014543:-174966 Msa1354370:CDS
CGCTGTTTCGGCTGTGATAC+CGG 0.403155 tig0014543:-175222 Msa1354370:CDS
AATAGGAGAGCACTCATCTT+GGG 0.408942 tig0014543:-175181 Msa1354370:CDS
CCCTTCTGCCTTTGCACTCG+AGG 0.411231 tig0014543:-174725 Msa1354370:CDS
CTCACATCGACGGGAAGGTT+TGG 0.420533 tig0014543:+174881 None:intergenic
TGTAGTATGTTCCAAGGGTT+GGG 0.424624 tig0014543:+174936 None:intergenic
AGTTGAACAATCAAAATAGA+TGG 0.442588 tig0014543:-175443 Msa1354370:CDS
CCACCAAGTTCGGGATGGAT+TGG 0.447763 tig0014543:-175660 None:intergenic
CTGTAGTATGTTCCAAGGGT+TGG 0.452990 tig0014543:+174935 None:intergenic
GAGACAGTTCGGTCCATATC+CGG 0.455659 tig0014543:+175005 None:intergenic
ACAGACCAAGGGACAGTCTC+AGG 0.456050 tig0014543:+174621 None:intergenic
CAGAACGTCGTGAGACAGTT+CGG 0.457061 tig0014543:+174994 None:intergenic
CCTTCTGCCTTTGCACTCGA+GGG 0.461384 tig0014543:-174724 Msa1354370:CDS
AAAAGCCCAAAGCCAATCCC+AGG 0.461472 tig0014543:-174494 Msa1354370:CDS
GACTGTCCCTTGGTCTGTAC+TGG 0.464231 tig0014543:-174616 Msa1354370:CDS
CCCCAAGAGCTCACATCGAC+GGG 0.472021 tig0014543:+174872 None:intergenic
ATGAAGCTTCACTGTTCCCT+GGG 0.472889 tig0014543:+174477 None:intergenic
TATGAAGCTTCACTGTTCCC+TGG 0.477188 tig0014543:+174476 None:intergenic
GTTCGATATTCTGGTGTCCT+AGG 0.478291 tig0014543:+175622 None:intergenic
TCCGACTTCCCCAGAGCCTC+CGG 0.480691 tig0014543:+175203 None:intergenic
CTCGAGGGCCAATCTCCGTC+TGG 0.480699 tig0014543:-174709 Msa1354370:CDS
GAATAGGAGAGCACTCATCT+TGG 0.487596 tig0014543:-175182 Msa1354370:CDS
GCCTTCCACCTAAGCTGCGC+AGG 0.489457 tig0014543:-174517 Msa1354370:CDS
GCAAAGAAGGCCTCCTTCCG+GGG 0.489774 tig0014543:+174538 None:intergenic
GGCTCTGGGGAAGTCGGAAT+AGG 0.491163 tig0014543:-175198 Msa1354370:CDS
ATTGCCTGATCGAATTGATC+AGG 0.499380 tig0014543:-175418 Msa1354370:intron
GATGTCGGCTCTTCGCCACC+TGG 0.508239 tig0014543:+174910 None:intergenic
TCCTGCGCAGCTTAGGTGGA+AGG 0.508478 tig0014543:+174516 None:intergenic
GCTGTGATACCGGAGGCTCT+GGG 0.508804 tig0014543:-175212 Msa1354370:CDS
CTCAGGTAGACAGTTTCTAT+GGG 0.510655 tig0014543:+174638 None:intergenic
CCCTCGAGTGCAAAGGCAGA+AGG 0.511073 tig0014543:+174724 None:intergenic
ATGACCTGATCAATTCGATC+AGG 0.514268 tig0014543:+175414 None:intergenic
GAGGCGTGCAAAGGTTTCCT+CGG 0.526013 tig0014543:+174685 None:intergenic
AGGCGTGCAAAGGTTTCCTC+GGG 0.527025 tig0014543:+174686 None:intergenic
CCAGAGTGGTATCTCACTGA+TGG 0.527423 tig0014543:-174569 Msa1354370:CDS
CCCGTCGATGTGAGCTCTTG+GGG 0.534121 tig0014543:-174872 Msa1354370:CDS
CCTTGGTCTGTACTGGCACA+AGG 0.538614 tig0014543:-174609 Msa1354370:CDS
ATTAAAGCGGTACGTGAGCT+GGG 0.539036 tig0014543:+174969 None:intergenic
CAAAGAAGGCCTCCTTCCGG+GGG 0.541469 tig0014543:+174539 None:intergenic
AAGGTTTGGCACCTCGATGT+CGG 0.545826 tig0014543:+174895 None:intergenic
TGGGCGAACAGCCCAACCCT+TGG 0.548090 tig0014543:-174947 Msa1354370:CDS
GCTTAGGTGGAAGGCAAAGA+AGG 0.550243 tig0014543:+174525 None:intergenic
TCCCCAAGAGCTCACATCGA+CGG 0.555494 tig0014543:+174871 None:intergenic
GCCAATCTCCGTCTGGCCCG+AGG 0.562208 tig0014543:-174702 Msa1354370:CDS
TGGAGCTGTAGTATGTTCCA+AGG 0.564153 tig0014543:+174930 None:intergenic
ACCGGAGGCTCTGGGGAAGT+CGG 0.567230 tig0014543:-175204 Msa1354370:CDS
TATCACAGCCGAAACAGCGA+TGG 0.574058 tig0014543:+175226 None:intergenic
TTGGAACATACTACAGCTCC+AGG 0.579135 tig0014543:-174928 Msa1354370:CDS
GTCTACCTGAGACTGTCCCT+TGG 0.586612 tig0014543:-174626 Msa1354370:CDS
GGGAACAGTGAAGCTTCATA+GGG 0.591786 tig0014543:-174473 None:intergenic
AAGGTAACGGAGGCGTGCAA+AGG 0.595805 tig0014543:+174676 None:intergenic
CCTCGAGTGCAAAGGCAGAA+GGG 0.595841 tig0014543:+174725 None:intergenic
AAAGGTTTCCTCGGGCCAGA+CGG 0.597813 tig0014543:+174694 None:intergenic
CTGTGATACCGGAGGCTCTG+GGG 0.598997 tig0014543:-175211 Msa1354370:CDS
GGTGTGGTTCCTCTACGCCT+AGG 0.606362 tig0014543:-175639 Msa1354370:CDS
TGGGGCGTAGGCCTCCCAAA+AGG 0.606913 tig0014543:+174657 None:intergenic
GTTCGGTCCATATCCGGTGT+GGG 0.608178 tig0014543:+175011 None:intergenic
AAGAGCTCACATCGACGGGA+AGG 0.613365 tig0014543:+174876 None:intergenic
AGTTCGGTCCATATCCGGTG+TGG 0.618273 tig0014543:+175010 None:intergenic
AAAGCCCAAAGCCAATCCCA+GGG 0.619579 tig0014543:-174493 Msa1354370:CDS
GGGCTGTTCGCCCATTAAAG+CGG 0.619701 tig0014543:+174956 None:intergenic
ATCACAGCCGAAACAGCGAT+GGG 0.621115 tig0014543:+175227 None:intergenic
TTCTGGTGTCCTAGGCGTAG+AGG 0.622900 tig0014543:+175630 None:intergenic
AGACAGTTTCTATGGGGCGT+AGG 0.622986 tig0014543:+174645 None:intergenic
ATAGGAGAGCACTCATCTTG+GGG 0.623240 tig0014543:-175180 Msa1354370:intron
GTAGGCCTCCCAAAAGGTAA+CGG 0.632223 tig0014543:+174663 None:intergenic
AAGTTCGGGATGGATTGGTG+TGG 0.636372 tig0014543:-175655 None:intergenic
GGAGCTGTAGTATGTTCCAA+GGG 0.640199 tig0014543:+174931 None:intergenic
CCTTGTGCCAGTACAGACCA+AGG 0.645647 tig0014543:+174609 None:intergenic
CAATGCTCTAACGCCCACAC+CGG 0.666176 tig0014543:-175024 Msa1354370:CDS
AGATTGGCCCTCGAGTGCAA+AGG 0.670375 tig0014543:+174717 None:intergenic
CCATCAGTGAGATACCACTC+TGG 0.671241 tig0014543:+174569 None:intergenic
AAAGAAGGCCTCCTTCCGGG+GGG 0.675250 tig0014543:+174540 None:intergenic
GAATTCTAGCTCTTCCAGAG+TGG 0.675255 tig0014543:-174583 Msa1354370:CDS
GGCCTCCCAAAAGGTAACGG+AGG 0.683463 tig0014543:+174666 None:intergenic
CTTGTGCCAGTACAGACCAA+GGG 0.693537 tig0014543:+174610 None:intergenic
GTGGGCGTTAGAGCATTGAG+AGG 0.697492 tig0014543:+175029 None:intergenic
GTGGCGAAGAGCCGACATCG+AGG 0.704477 tig0014543:-174906 Msa1354370:CDS
TGTTTCGGCTGTGATACCGG+AGG 0.717886 tig0014543:-175219 Msa1354370:CDS
TCAGGTAGACAGTTTCTATG+GGG 0.720720 tig0014543:+174639 None:intergenic
GAACATACTACAGCTCCAGG+TGG 0.771466 tig0014543:-174925 Msa1354370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGTTGAACAATCAAAATAGA+TGG - tig0014543:174678-174697 Msa1354370:CDS 25.0%
! AGTTGAACAATCAAAATAGA+TGG - tig0014543:174678-174697 Msa1354370:CDS 25.0%
CACCTATCGTTAATGAAAAA+CGG - tig0014543:174802-174821 Msa1354370:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + tig0014543:174843-174862 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG + tig0014543:175291-175310 None:intergenic 30.0%
CACCTATCGTTAATGAAAAA+CGG - tig0014543:174802-174821 Msa1354370:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + tig0014543:174843-174862 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG + tig0014543:175291-175310 None:intergenic 30.0%
! CATATTGACTAGTCAATGTC+AGG - tig0014543:174552-174571 Msa1354370:CDS 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + tig0014543:174807-174826 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG + tig0014543:175283-175302 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG + tig0014543:175292-175311 None:intergenic 35.0%
! CATATTGACTAGTCAATGTC+AGG - tig0014543:174552-174571 Msa1354370:CDS 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + tig0014543:174807-174826 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG + tig0014543:175283-175302 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG + tig0014543:175292-175311 None:intergenic 35.0%
TCGTTCATGGTTCGATATTC+TGG + tig0014543:174511-174530 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - tig0014543:174516-174535 Msa1354370:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + tig0014543:174524-174543 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + tig0014543:174616-174635 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - tig0014543:174616-174635 Msa1354370:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - tig0014543:174703-174722 Msa1354370:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG + tig0014543:174710-174729 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - tig0014543:174719-174738 Msa1354370:CDS 40.0%
AGAACAAGGTTCAAGTCTAC+CGG - tig0014543:174733-174752 Msa1354370:CDS 40.0%
CATTAACGATAGGTGTCAAG+TGG + tig0014543:174797-174816 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + tig0014543:174837-174856 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG - tig0014543:174940-174959 Msa1354370:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + tig0014543:175188-175207 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - tig0014543:175297-175316 Msa1354370:intron 40.0%
TCAGGTAGACAGTTTCTATG+GGG + tig0014543:175485-175504 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + tig0014543:175486-175505 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + tig0014543:175487-175506 None:intergenic 40.0%
TCGTTCATGGTTCGATATTC+TGG + tig0014543:174511-174530 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - tig0014543:174516-174535 Msa1354370:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + tig0014543:174524-174543 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + tig0014543:174616-174635 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - tig0014543:174616-174635 Msa1354370:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - tig0014543:174703-174722 Msa1354370:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG + tig0014543:174710-174729 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - tig0014543:174719-174738 Msa1354370:CDS 40.0%
AGAACAAGGTTCAAGTCTAC+CGG - tig0014543:174733-174752 Msa1354370:CDS 40.0%
CATTAACGATAGGTGTCAAG+TGG + tig0014543:174797-174816 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + tig0014543:174837-174856 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG - tig0014543:174940-174959 Msa1354370:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + tig0014543:175188-175207 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - tig0014543:175297-175316 Msa1354370:intron 40.0%
TCAGGTAGACAGTTTCTATG+GGG + tig0014543:175485-175504 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + tig0014543:175486-175505 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + tig0014543:175487-175506 None:intergenic 40.0%
GTTCGATATTCTGGTGTCCT+AGG + tig0014543:174502-174521 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - tig0014543:174569-174588 Msa1354370:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - tig0014543:174574-174593 Msa1354370:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + tig0014543:174579-174598 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + tig0014543:174617-174636 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - tig0014543:174615-174634 Msa1354370:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + tig0014543:174621-174640 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - tig0014543:174620-174639 Msa1354370:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - tig0014543:174621-174640 Msa1354370:CDS 45.0%
TTCAAGTCTACCGGTCTGTT+AGG - tig0014543:174742-174761 Msa1354370:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG + tig0014543:174771-174790 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG - tig0014543:174939-174958 Msa1354370:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG - tig0014543:174941-174960 Msa1354370:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - tig0014543:175022-175041 Msa1354370:CDS 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + tig0014543:175155-175174 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - tig0014543:175155-175174 Msa1354370:intron 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + tig0014543:175189-175208 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + tig0014543:175193-175212 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + tig0014543:175194-175213 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - tig0014543:175193-175212 Msa1354370:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - tig0014543:175538-175557 Msa1354370:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG + tig0014543:175647-175666 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG + tig0014543:175648-175667 None:intergenic 45.0%
GTTCGATATTCTGGTGTCCT+AGG + tig0014543:174502-174521 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - tig0014543:174569-174588 Msa1354370:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - tig0014543:174574-174593 Msa1354370:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + tig0014543:174579-174598 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + tig0014543:174617-174636 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - tig0014543:174615-174634 Msa1354370:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + tig0014543:174621-174640 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - tig0014543:174620-174639 Msa1354370:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - tig0014543:174621-174640 Msa1354370:CDS 45.0%
TTCAAGTCTACCGGTCTGTT+AGG - tig0014543:174742-174761 Msa1354370:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG + tig0014543:174771-174790 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG - tig0014543:174939-174958 Msa1354370:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG - tig0014543:174941-174960 Msa1354370:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - tig0014543:175022-175041 Msa1354370:CDS 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + tig0014543:175155-175174 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - tig0014543:175155-175174 Msa1354370:intron 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + tig0014543:175189-175208 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + tig0014543:175193-175212 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + tig0014543:175194-175213 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - tig0014543:175193-175212 Msa1354370:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - tig0014543:175538-175557 Msa1354370:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG + tig0014543:175647-175666 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG + tig0014543:175648-175667 None:intergenic 45.0%
TTGACTGGAGAGGACACCAA+AGG - tig0014543:174584-174603 Msa1354370:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + tig0014543:174625-174644 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - tig0014543:174622-174641 Msa1354370:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - tig0014543:174623-174642 Msa1354370:CDS 50.0%
CAGAGAACCCATCGCTGTTT+CGG - tig0014543:174887-174906 Msa1354370:CDS 50.0%
ATCACAGCCGAAACAGCGAT+GGG + tig0014543:174897-174916 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG + tig0014543:174898-174917 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + tig0014543:175029-175048 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + tig0014543:175069-175088 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + tig0014543:175119-175138 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + tig0014543:175130-175149 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + tig0014543:175156-175175 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - tig0014543:175154-175173 Msa1354370:intron 50.0%
GAACATACTACAGCTCCAGG+TGG - tig0014543:175196-175215 Msa1354370:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG + tig0014543:175229-175248 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + tig0014543:175461-175480 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + tig0014543:175479-175498 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + tig0014543:175514-175533 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + tig0014543:175555-175574 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - tig0014543:175552-175571 Msa1354370:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG + tig0014543:175599-175618 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG - tig0014543:175627-175646 Msa1354370:CDS 50.0%
AAAGCCCAAAGCCAATCCCA+GGG - tig0014543:175628-175647 Msa1354370:CDS 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG + tig0014543:175635-175654 None:intergenic 50.0%
TTGACTGGAGAGGACACCAA+AGG - tig0014543:174584-174603 Msa1354370:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + tig0014543:174625-174644 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - tig0014543:174622-174641 Msa1354370:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - tig0014543:174623-174642 Msa1354370:CDS 50.0%
CAGAGAACCCATCGCTGTTT+CGG - tig0014543:174887-174906 Msa1354370:CDS 50.0%
ATCACAGCCGAAACAGCGAT+GGG + tig0014543:174897-174916 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG + tig0014543:174898-174917 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + tig0014543:175029-175048 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + tig0014543:175069-175088 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + tig0014543:175119-175138 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + tig0014543:175130-175149 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + tig0014543:175156-175175 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - tig0014543:175154-175173 Msa1354370:intron 50.0%
GAACATACTACAGCTCCAGG+TGG - tig0014543:175196-175215 Msa1354370:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG + tig0014543:175229-175248 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + tig0014543:175461-175480 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + tig0014543:175479-175498 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + tig0014543:175514-175533 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + tig0014543:175555-175574 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - tig0014543:175552-175571 Msa1354370:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG + tig0014543:175599-175618 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG - tig0014543:175627-175646 Msa1354370:CDS 50.0%
AAAGCCCAAAGCCAATCCCA+GGG - tig0014543:175628-175647 Msa1354370:CDS 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG + tig0014543:175635-175654 None:intergenic 50.0%
TTCTGGTGTCCTAGGCGTAG+AGG + tig0014543:174494-174513 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG + tig0014543:174626-174645 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - tig0014543:174630-174649 Msa1354370:CDS 55.0%
! GCTGAGGCATCCTAACAGAC+CGG + tig0014543:174755-174774 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG - tig0014543:174862-174881 Msa1354370:CDS 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG - tig0014543:174863-174882 Msa1354370:CDS 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG - tig0014543:174899-174918 Msa1354370:CDS 55.0%
TGTTTCGGCTGTGATACCGG+AGG - tig0014543:174902-174921 Msa1354370:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - tig0014543:174945-174964 Msa1354370:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + tig0014543:175005-175024 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + tig0014543:175018-175037 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + tig0014543:175019-175038 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - tig0014543:175033-175052 Msa1354370:CDS 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - tig0014543:175063-175082 Msa1354370:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + tig0014543:175068-175087 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - tig0014543:175068-175087 Msa1354370:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + tig0014543:175074-175093 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + tig0014543:175095-175114 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - tig0014543:175097-175116 Msa1354370:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - tig0014543:175103-175122 Msa1354370:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + tig0014543:175113-175132 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + tig0014543:175114-175133 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + tig0014543:175168-175187 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + tig0014543:175243-175262 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + tig0014543:175248-175267 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - tig0014543:175247-175266 Msa1354370:intron 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - tig0014543:175248-175267 Msa1354370:intron 55.0%
TCCCCAAGAGCTCACATCGA+CGG + tig0014543:175253-175272 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + tig0014543:175338-175357 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + tig0014543:175399-175418 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - tig0014543:175397-175416 Msa1354370:intron 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + tig0014543:175407-175426 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + tig0014543:175430-175449 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + tig0014543:175438-175457 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + tig0014543:175439-175458 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + tig0014543:175448-175467 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - tig0014543:175449-175468 Msa1354370:CDS 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - tig0014543:175450-175469 Msa1354370:CDS 55.0%
GTCTACCTGAGACTGTCCCT+TGG - tig0014543:175495-175514 Msa1354370:intron 55.0%
ACAGACCAAGGGACAGTCTC+AGG + tig0014543:175503-175522 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - tig0014543:175505-175524 Msa1354370:intron 55.0%
CCTTGTGCCAGTACAGACCA+AGG + tig0014543:175515-175534 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - tig0014543:175512-175531 Msa1354370:intron 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + tig0014543:175588-175607 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG + tig0014543:175612-175631 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG + tig0014543:175636-175655 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG + tig0014543:175642-175661 None:intergenic 55.0%
TTCTGGTGTCCTAGGCGTAG+AGG + tig0014543:174494-174513 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG + tig0014543:174626-174645 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - tig0014543:174630-174649 Msa1354370:CDS 55.0%
! GCTGAGGCATCCTAACAGAC+CGG + tig0014543:174755-174774 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG - tig0014543:174862-174881 Msa1354370:CDS 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG - tig0014543:174863-174882 Msa1354370:CDS 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG - tig0014543:174899-174918 Msa1354370:CDS 55.0%
TGTTTCGGCTGTGATACCGG+AGG - tig0014543:174902-174921 Msa1354370:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - tig0014543:174945-174964 Msa1354370:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + tig0014543:175005-175024 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + tig0014543:175018-175037 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + tig0014543:175019-175038 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - tig0014543:175033-175052 Msa1354370:CDS 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - tig0014543:175063-175082 Msa1354370:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + tig0014543:175068-175087 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - tig0014543:175068-175087 Msa1354370:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + tig0014543:175074-175093 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + tig0014543:175095-175114 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - tig0014543:175097-175116 Msa1354370:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - tig0014543:175103-175122 Msa1354370:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + tig0014543:175113-175132 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + tig0014543:175114-175133 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + tig0014543:175168-175187 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + tig0014543:175243-175262 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + tig0014543:175248-175267 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - tig0014543:175247-175266 Msa1354370:intron 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - tig0014543:175248-175267 Msa1354370:intron 55.0%
TCCCCAAGAGCTCACATCGA+CGG + tig0014543:175253-175272 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + tig0014543:175338-175357 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + tig0014543:175399-175418 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - tig0014543:175397-175416 Msa1354370:intron 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + tig0014543:175407-175426 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + tig0014543:175430-175449 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + tig0014543:175438-175457 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + tig0014543:175439-175458 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + tig0014543:175448-175467 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - tig0014543:175449-175468 Msa1354370:CDS 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - tig0014543:175450-175469 Msa1354370:CDS 55.0%
GTCTACCTGAGACTGTCCCT+TGG - tig0014543:175495-175514 Msa1354370:intron 55.0%
ACAGACCAAGGGACAGTCTC+AGG + tig0014543:175503-175522 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - tig0014543:175505-175524 Msa1354370:intron 55.0%
CCTTGTGCCAGTACAGACCA+AGG + tig0014543:175515-175534 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - tig0014543:175512-175531 Msa1354370:intron 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + tig0014543:175588-175607 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG + tig0014543:175612-175631 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG + tig0014543:175636-175655 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG + tig0014543:175642-175661 None:intergenic 55.0%
GGTGTGGTTCCTCTACGCCT+AGG - tig0014543:174482-174501 Msa1354370:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG + tig0014543:174603-174622 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + tig0014543:174610-174629 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - tig0014543:174636-174655 Msa1354370:CDS 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG - tig0014543:174864-174883 Msa1354370:CDS 60.0%
GCTGTGATACCGGAGGCTCT+GGG - tig0014543:174909-174928 Msa1354370:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - tig0014543:174910-174929 Msa1354370:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG - tig0014543:174923-174942 Msa1354370:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - tig0014543:174944-174963 Msa1354370:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - tig0014543:174989-175008 Msa1354370:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - tig0014543:175010-175029 Msa1354370:CDS 60.0%
CTAGTACGAGAGGACCGGGA+AGG + tig0014543:175064-175083 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - tig0014543:175062-175081 Msa1354370:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + tig0014543:175252-175271 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - tig0014543:175249-175268 Msa1354370:intron 60.0%
TCGGCACCGTCGGATCACTA+AGG - tig0014543:175329-175348 Msa1354370:intron 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + tig0014543:175355-175374 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - tig0014543:175353-175372 Msa1354370:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - tig0014543:175354-175373 Msa1354370:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - tig0014543:175396-175415 Msa1354370:intron 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + tig0014543:175400-175419 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - tig0014543:175453-175472 Msa1354370:CDS 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + tig0014543:175458-175477 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + tig0014543:175584-175603 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + tig0014543:175585-175604 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + tig0014543:175586-175605 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + tig0014543:175587-175606 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG + tig0014543:175608-175627 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG + tig0014543:175615-175634 None:intergenic 60.0%
GGTGTGGTTCCTCTACGCCT+AGG - tig0014543:174482-174501 Msa1354370:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG + tig0014543:174603-174622 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + tig0014543:174610-174629 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - tig0014543:174636-174655 Msa1354370:CDS 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG - tig0014543:174864-174883 Msa1354370:CDS 60.0%
GCTGTGATACCGGAGGCTCT+GGG - tig0014543:174909-174928 Msa1354370:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - tig0014543:174910-174929 Msa1354370:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG - tig0014543:174923-174942 Msa1354370:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - tig0014543:174944-174963 Msa1354370:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - tig0014543:174989-175008 Msa1354370:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - tig0014543:175010-175029 Msa1354370:CDS 60.0%
CTAGTACGAGAGGACCGGGA+AGG + tig0014543:175064-175083 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - tig0014543:175062-175081 Msa1354370:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + tig0014543:175252-175271 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - tig0014543:175249-175268 Msa1354370:intron 60.0%
TCGGCACCGTCGGATCACTA+AGG - tig0014543:175329-175348 Msa1354370:intron 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + tig0014543:175355-175374 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - tig0014543:175353-175372 Msa1354370:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - tig0014543:175354-175373 Msa1354370:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - tig0014543:175396-175415 Msa1354370:intron 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + tig0014543:175400-175419 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - tig0014543:175453-175472 Msa1354370:CDS 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + tig0014543:175458-175477 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + tig0014543:175584-175603 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + tig0014543:175585-175604 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + tig0014543:175586-175605 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + tig0014543:175587-175606 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG + tig0014543:175608-175627 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG + tig0014543:175615-175634 None:intergenic 60.0%
ATGGGTTCTCTGCCCCTGCG+GGG + tig0014543:174879-174898 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + tig0014543:174880-174899 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + tig0014543:174881-174900 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - tig0014543:174908-174927 Msa1354370:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - tig0014543:174917-174936 Msa1354370:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + tig0014543:174921-174940 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + tig0014543:175000-175019 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - tig0014543:175047-175066 Msa1354370:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - tig0014543:175174-175193 Msa1354370:intron 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + tig0014543:175214-175233 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - tig0014543:175215-175234 Msa1354370:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG + tig0014543:175309-175328 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG - tig0014543:175310-175329 Msa1354370:intron 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG + tig0014543:175323-175342 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG + tig0014543:175324-175343 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG + tig0014543:175328-175347 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - tig0014543:175357-175376 Msa1354370:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - tig0014543:175358-175377 Msa1354370:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG + tig0014543:175366-175385 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - tig0014543:175412-175431 Msa1354370:intron 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + tig0014543:175423-175442 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + tig0014543:175467-175486 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG - tig0014543:175604-175623 Msa1354370:intron 65.0%
ATGGGTTCTCTGCCCCTGCG+GGG + tig0014543:174879-174898 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + tig0014543:174880-174899 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + tig0014543:174881-174900 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - tig0014543:174908-174927 Msa1354370:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - tig0014543:174917-174936 Msa1354370:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + tig0014543:174921-174940 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + tig0014543:175000-175019 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - tig0014543:175047-175066 Msa1354370:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - tig0014543:175174-175193 Msa1354370:intron 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + tig0014543:175214-175233 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - tig0014543:175215-175234 Msa1354370:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG + tig0014543:175309-175328 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG - tig0014543:175310-175329 Msa1354370:intron 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG + tig0014543:175323-175342 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG + tig0014543:175324-175343 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG + tig0014543:175328-175347 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - tig0014543:175357-175376 Msa1354370:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - tig0014543:175358-175377 Msa1354370:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG + tig0014543:175366-175385 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - tig0014543:175412-175431 Msa1354370:intron 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + tig0014543:175423-175442 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + tig0014543:175467-175486 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG - tig0014543:175604-175623 Msa1354370:intron 65.0%
GTTCTCTGCCCCTGCGGGGA+TGG + tig0014543:174875-174894 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + tig0014543:175052-175071 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG - tig0014543:175319-175338 Msa1354370:intron 70.0%
GCAAGACCCACCCGTCGAGC+AGG + tig0014543:175367-175386 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - tig0014543:175419-175438 Msa1354370:CDS 70.0%
CACTGATGGCTCGAGCCCCC+CGG - tig0014543:175566-175585 Msa1354370:intron 70.0%
GTTCTCTGCCCCTGCGGGGA+TGG + tig0014543:174875-174894 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + tig0014543:175052-175071 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG - tig0014543:175319-175338 Msa1354370:intron 70.0%
GCAAGACCCACCCGTCGAGC+AGG + tig0014543:175367-175386 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - tig0014543:175419-175438 Msa1354370:CDS 70.0%
CACTGATGGCTCGAGCCCCC+CGG - tig0014543:175566-175585 Msa1354370:intron 70.0%
GATGGCTCGAGCCCCCCGGA+AGG - tig0014543:175570-175589 Msa1354370:intron 75.0%
GATGGCTCGAGCCCCCCGGA+AGG - tig0014543:175570-175589 Msa1354370:intron 75.0%
! GGCTCGAGCCCCCCGGAAGG+AGG - tig0014543:175573-175592 Msa1354370:intron 80.0%
! GGCTCGAGCCCCCCGGAAGG+AGG - tig0014543:175573-175592 Msa1354370:intron 80.0%
Chromosome Type Strat End Strand Name
tig0014543 gene 174475 175668 174475 ID=Msa1354370;Name=Msa1354370
tig0014543 mRNA 174475 175668 174475 ID=Msa1354370-mRNA-1;Parent=Msa1354370;Name=Msa1354370-mRNA-1;_AED=0.59;_eAED=0.71;_QI=0|0|0|0.4|1|1|5|0|233
tig0014543 exon 175612 175668 175612 ID=Msa1354370-mRNA-1:exon:9103;Parent=Msa1354370-mRNA-1
tig0014543 exon 175419 175493 175419 ID=Msa1354370-mRNA-1:exon:9102;Parent=Msa1354370-mRNA-1
tig0014543 exon 175181 175259 175181 ID=Msa1354370-mRNA-1:exon:9101;Parent=Msa1354370-mRNA-1
tig0014543 exon 174849 175059 174849 ID=Msa1354370-mRNA-1:exon:9100;Parent=Msa1354370-mRNA-1
tig0014543 exon 174475 174754 174475 ID=Msa1354370-mRNA-1:exon:9099;Parent=Msa1354370-mRNA-1
tig0014543 CDS 175612 175668 175612 ID=Msa1354370-mRNA-1:cds;Parent=Msa1354370-mRNA-1
tig0014543 CDS 175419 175493 175419 ID=Msa1354370-mRNA-1:cds;Parent=Msa1354370-mRNA-1
tig0014543 CDS 175181 175259 175181 ID=Msa1354370-mRNA-1:cds;Parent=Msa1354370-mRNA-1
tig0014543 CDS 174849 175059 174849 ID=Msa1354370-mRNA-1:cds;Parent=Msa1354370-mRNA-1
tig0014543 CDS 174475 174754 174475 ID=Msa1354370-mRNA-1:cds;Parent=Msa1354370-mRNA-1
Gene Sequence

>Msa1354370

ATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAAAGGTTTTGGTTTTTTCATGTTGTCAAAGAGTTGAACAATCAAAATAGATGGCGATTGCCTGATCGAATTGATCAGGGGCAGAGAACCCATCGCTGTTTCGGCTGTGATACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGATCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGTCTGTACTGGCACAAGGTTAGAATTCTAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGAGCCCCCCGGAAGGAGGCCTTCTTTGCCTTCCACCTAAGCTGCGCAGGAAAAGCCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCATAG

Protein sequence

>Msa1354370

MDWCGSSTPRTPEYRTMNERFWFFHVVKELNNQNRWRLPDRIDQGQRTHRCFGCDTGGSGEVGIGEHSSWGKGPLNALTPTPDMDRTVSRRSEPSSRTALMGEQPNPWNILQLQVAKSRHRGAKPSRRCELLGKISLLSLDQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLGLYWHKVRILALPEWYLTDGSSPPEGGLLCLPPKLRRKSPKPIPGNSEAS*