AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1391130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1391130 MtrunA17_Chr4g0016151 100.000 82 0 0 199 280 1 82 7.40e-55 172
Msa1391130 MtrunA17_CPg0492351 100.000 82 0 0 199 280 1 82 7.40e-55 172
Msa1391130 MtrunA17_Chr7g0229411 98.780 82 1 0 199 280 1 82 3.39e-54 170
Msa1391130 MtrunA17_Chr4g0000631 98.780 82 1 0 199 280 1 82 3.50e-54 170
Msa1391130 MtrunA17_Chr5g0435911 97.561 82 2 0 199 280 1 82 1.38e-52 166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 122 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTTCATGGTTCGATATTC+TGG 0.185586 tig0021410:+33342 None:intergenic
TGCACGCCTCCGTTACCTTT+TGG 0.196515 tig0021410:-32401 Msa1391130:CDS
CAGCTCACGTACCGCTTTAA+TGG 0.245260 tig0021410:-32696 Msa1391130:CDS
TCATGCCTTTACTTCGTTCA+TGG 0.272664 tig0021410:+33329 None:intergenic
GGCTGTGATACCGGAGGCTC+TGG 0.279951 tig0021410:-32942 Msa1391130:CDS
TCTCAGGTAGACAGTTTCTA+TGG 0.287253 tig0021410:+32366 None:intergenic
GCACGAAAGGCGTAACGATC+TGG 0.311741 tig0021410:+32102 None:intergenic
TCTAACGCCCACACCGGATA+TGG 0.325084 tig0021410:-32747 Msa1391130:CDS
CAGAGAACCCATCGCTGTTT+CGG 0.333458 tig0021410:-32963 Msa1391130:CDS
TCCTCGGGCCAGACGGAGAT+TGG 0.349112 tig0021410:+32430 None:intergenic
TCCCGTCGATGTGAGCTCTT+GGG 0.355274 tig0021410:-32602 Msa1391130:CDS
CACCAACTTCCTTAACCTTC+CGG 0.362818 tig0021410:-31977 Msa1391130:CDS
TTCACCGGGGCTTCGGTCGC+CGG 0.371598 tig0021410:-32017 Msa1391130:CDS
CAAAGTCGTAAGACCATGTA+TGG 0.380055 tig0021410:+31934 None:intergenic
AAAGTTACTCTAGGGATAAC+AGG 0.383241 tig0021410:+32570 None:intergenic
CATTAAAGCGGTACGTGAGC+TGG 0.384796 tig0021410:+32697 None:intergenic
TTCCCGTCGATGTGAGCTCT+TGG 0.386490 tig0021410:-32603 Msa1391130:CDS
AGCTCACGTACCGCTTTAAT+GGG 0.395506 tig0021410:-32695 Msa1391130:CDS
GCCGCCGTTCACCGGGGCTT+CGG 0.397671 tig0021410:-32024 Msa1391130:CDS
CGCTGTTTCGGCTGTGATAC+CGG 0.403155 tig0021410:-32951 Msa1391130:CDS
AATAGGAGAGCACTCATCTT+GGG 0.408942 tig0021410:-32910 Msa1391130:CDS
TGCCCAGTGCCGGAAGGTTA+AGG 0.409134 tig0021410:+31968 None:intergenic
CCCTTCTGCCTTTGCACTCG+AGG 0.411231 tig0021410:-32454 Msa1391130:CDS
CTCACATCGACGGGAAGGTT+TGG 0.420533 tig0021410:+32610 None:intergenic
CTTCCTTAACCTTCCGGCAC+TGG 0.422146 tig0021410:-31971 Msa1391130:CDS
TGTAGTATGTTCCAAGGGTT+GGG 0.424624 tig0021410:+32665 None:intergenic
TAGTTACGGCCGCCGTTCAC+CGG 0.432611 tig0021410:-32032 Msa1391130:CDS
GGCTGACGCCTGCCCAGTGC+CGG 0.435469 tig0021410:+31958 None:intergenic
TTAACCTTCCGGCACTGGGC+AGG 0.436659 tig0021410:-31966 Msa1391130:CDS
AGTTACGGCCGCCGTTCACC+GGG 0.437053 tig0021410:-32031 Msa1391130:CDS
AGTTGAACAATCAAAATAGA+TGG 0.442588 tig0021410:-33172 Msa1391130:CDS
CCACCAAGTTCGGGATGGAT+TGG 0.447763 tig0021410:-33389 None:intergenic
CTGTAGTATGTTCCAAGGGT+TGG 0.452990 tig0021410:+32664 None:intergenic
TCGCCGGCTTCCCTGTCATC+AGG 0.453580 tig0021410:-32001 Msa1391130:CDS
GAGACAGTTCGGTCCATATC+CGG 0.455659 tig0021410:+32734 None:intergenic
ACAGACCAAGGGACAGTCTC+AGG 0.456050 tig0021410:+32350 None:intergenic
CAGAACGTCGTGAGACAGTT+CGG 0.457061 tig0021410:+32723 None:intergenic
GAAGCCGGCGACCGAAGCCC+CGG 0.461073 tig0021410:+32013 None:intergenic
CCTTCTGCCTTTGCACTCGA+GGG 0.461384 tig0021410:-32453 Msa1391130:CDS
GACTGTCCCTTGGTCTGTAC+TGG 0.464231 tig0021410:-32345 Msa1391130:CDS
CCCCAAGAGCTCACATCGAC+GGG 0.472021 tig0021410:+32601 None:intergenic
TACATGGTCTTACGACTTTG+CGG 0.476001 tig0021410:-31931 Msa1391130:CDS
GTTCGATATTCTGGTGTCCT+AGG 0.478291 tig0021410:+33351 None:intergenic
TCCGACTTCCCCAGAGCCTC+CGG 0.480691 tig0021410:+32932 None:intergenic
CTCGAGGGCCAATCTCCGTC+TGG 0.480699 tig0021410:-32438 Msa1391130:CDS
TGCCGGAAGGTTAAGGAAGT+TGG 0.485164 tig0021410:+31975 None:intergenic
GAATAGGAGAGCACTCATCT+TGG 0.487596 tig0021410:-32911 Msa1391130:CDS
ACAAGGAATTTCGCTACCTT+AGG 0.488888 tig0021410:-32062 Msa1391130:CDS
GGCTCTGGGGAAGTCGGAAT+AGG 0.491163 tig0021410:-32927 Msa1391130:CDS
CACGAAAGGCGTAACGATCT+GGG 0.491297 tig0021410:+32103 None:intergenic
GAAGTTGGTGACCTGATGAC+AGG 0.495416 tig0021410:+31990 None:intergenic
AGGTAGCGAAATTCCTTGTC+GGG 0.495901 tig0021410:+32066 None:intergenic
ATTGCCTGATCGAATTGATC+AGG 0.499380 tig0021410:-33147 Msa1391130:intron
TTCCTTAACCTTCCGGCACT+GGG 0.504342 tig0021410:-31970 Msa1391130:CDS
GCGACCGAAGCCCCGGTGAA+CGG 0.505900 tig0021410:+32020 None:intergenic
CACTGTCTCGGAGAGAGGCT+CGG 0.506062 tig0021410:+32126 None:intergenic
GATGTCGGCTCTTCGCCACC+TGG 0.508239 tig0021410:+32639 None:intergenic
GCTGTGATACCGGAGGCTCT+GGG 0.508804 tig0021410:-32941 Msa1391130:CDS
CTCAGGTAGACAGTTTCTAT+GGG 0.510655 tig0021410:+32367 None:intergenic
CCCTCGAGTGCAAAGGCAGA+AGG 0.511073 tig0021410:+32453 None:intergenic
AAGGTAGCGAAATTCCTTGT+CGG 0.511527 tig0021410:+32065 None:intergenic
TAACGATCTGGGCACTGTCT+CGG 0.513539 tig0021410:+32114 None:intergenic
ATGACCTGATCAATTCGATC+AGG 0.514268 tig0021410:+33143 None:intergenic
GATCGTTACGCCTTTCGTGC+GGG 0.516913 tig0021410:-32099 Msa1391130:CDS
TGACCTGATGACAGGGAAGC+CGG 0.518242 tig0021410:+31998 None:intergenic
CCTTAGGACCGTTATAGTTA+CGG 0.519214 tig0021410:-32046 Msa1391130:CDS
GAGGCGTGCAAAGGTTTCCT+CGG 0.526013 tig0021410:+32414 None:intergenic
AGGCGTGCAAAGGTTTCCTC+GGG 0.527025 tig0021410:+32415 None:intergenic
CCCGTCGATGTGAGCTCTTG+GGG 0.534121 tig0021410:-32601 Msa1391130:CDS
CCTTGGTCTGTACTGGCACA+AGG 0.538614 tig0021410:-32338 Msa1391130:intron
ATTAAAGCGGTACGTGAGCT+GGG 0.539036 tig0021410:+32698 None:intergenic
CTGGGCACTGTCTCGGAGAG+AGG 0.542198 tig0021410:+32121 None:intergenic
AAGGTTTGGCACCTCGATGT+CGG 0.545826 tig0021410:+32624 None:intergenic
TGGGCGAACAGCCCAACCCT+TGG 0.548090 tig0021410:-32676 Msa1391130:CDS
TCCCCAAGAGCTCACATCGA+CGG 0.555494 tig0021410:+32600 None:intergenic
AAAGTCGTAAGACCATGTAT+GGG 0.556989 tig0021410:+31935 None:intergenic
GCCAATCTCCGTCTGGCCCG+AGG 0.562208 tig0021410:-32431 Msa1391130:CDS
TGGAGCTGTAGTATGTTCCA+AGG 0.564153 tig0021410:+32659 None:intergenic
ACCGAAGCCCCGGTGAACGG+CGG 0.564471 tig0021410:+32023 None:intergenic
AGATCGTTACGCCTTTCGTG+CGG 0.565799 tig0021410:-32100 Msa1391130:CDS
ACCGGAGGCTCTGGGGAAGT+CGG 0.567230 tig0021410:-32933 Msa1391130:CDS
GACGCCTGCCCAGTGCCGGA+AGG 0.568365 tig0021410:+31962 None:intergenic
TATCACAGCCGAAACAGCGA+TGG 0.574058 tig0021410:+32955 None:intergenic
CCGTAACTATAACGGTCCTA+AGG 0.574485 tig0021410:+32046 None:intergenic
TTGGAACATACTACAGCTCC+AGG 0.579135 tig0021410:-32657 Msa1391130:CDS
TAAGTTCCGACCCGCACGAA+AGG 0.581321 tig0021410:+32089 None:intergenic
GTCTACCTGAGACTGTCCCT+TGG 0.586612 tig0021410:-32355 Msa1391130:CDS
AAGGTAACGGAGGCGTGCAA+AGG 0.595805 tig0021410:+32405 None:intergenic
CCTCGAGTGCAAAGGCAGAA+GGG 0.595841 tig0021410:+32454 None:intergenic
AAAGGTTTCCTCGGGCCAGA+CGG 0.597813 tig0021410:+32423 None:intergenic
CTGTGATACCGGAGGCTCTG+GGG 0.598997 tig0021410:-32940 Msa1391130:CDS
AACGGCGGCCGTAACTATAA+CGG 0.599287 tig0021410:+32038 None:intergenic
GTTACGCCTTTCGTGCGGGT+CGG 0.605304 tig0021410:-32095 Msa1391130:CDS
GGTGTGGTTCCTCTACGCCT+AGG 0.606362 tig0021410:-33368 Msa1391130:CDS
TGGGGCGTAGGCCTCCCAAA+AGG 0.606913 tig0021410:+32386 None:intergenic
GTTCGGTCCATATCCGGTGT+GGG 0.608178 tig0021410:+32740 None:intergenic
AAGAGCTCACATCGACGGGA+AGG 0.613365 tig0021410:+32605 None:intergenic
AGTTCGGTCCATATCCGGTG+TGG 0.618273 tig0021410:+32739 None:intergenic
GGGCTGTTCGCCCATTAAAG+CGG 0.619701 tig0021410:+32685 None:intergenic
ATCACAGCCGAAACAGCGAT+GGG 0.621115 tig0021410:+32956 None:intergenic
AAGTCGTAAGACCATGTATG+GGG 0.621859 tig0021410:+31936 None:intergenic
TTCTGGTGTCCTAGGCGTAG+AGG 0.622900 tig0021410:+33359 None:intergenic
AGACAGTTTCTATGGGGCGT+AGG 0.622986 tig0021410:+32374 None:intergenic
ATAGGAGAGCACTCATCTTG+GGG 0.623240 tig0021410:-32909 Msa1391130:intron
AAGTTGGTGACCTGATGACA+GGG 0.627282 tig0021410:+31991 None:intergenic
GTAGGCCTCCCAAAAGGTAA+CGG 0.632223 tig0021410:+32392 None:intergenic
AAGTTCGGGATGGATTGGTG+TGG 0.636372 tig0021410:-33384 None:intergenic
GGAGCTGTAGTATGTTCCAA+GGG 0.640199 tig0021410:+32660 None:intergenic
TAGACATGTCTGTGAAGATG+CGG 0.645281 tig0021410:+32154 None:intergenic
CCTTGTGCCAGTACAGACCA+AGG 0.645647 tig0021410:+32338 None:intergenic
GGGTCGGAACTTACCCGACA+AGG 0.655880 tig0021410:-32079 Msa1391130:CDS
CAATGCTCTAACGCCCACAC+CGG 0.666176 tig0021410:-32753 Msa1391130:CDS
AGATTGGCCCTCGAGTGCAA+AGG 0.670375 tig0021410:+32446 None:intergenic
GGCCTCCCAAAAGGTAACGG+AGG 0.683463 tig0021410:+32395 None:intergenic
AGTCGTAAGACCATGTATGG+GGG 0.686647 tig0021410:+31937 None:intergenic
CTTGTGCCAGTACAGACCAA+GGG 0.693537 tig0021410:+32339 None:intergenic
GTGGGCGTTAGAGCATTGAG+AGG 0.697492 tig0021410:+32758 None:intergenic
GTGGCGAAGAGCCGACATCG+AGG 0.704477 tig0021410:-32635 Msa1391130:CDS
TGTTTCGGCTGTGATACCGG+AGG 0.717886 tig0021410:-32948 Msa1391130:CDS
TCAGGTAGACAGTTTCTATG+GGG 0.720720 tig0021410:+32368 None:intergenic
GTTACGGCCGCCGTTCACCG+GGG 0.732311 tig0021410:-32030 Msa1391130:CDS
GAACATACTACAGCTCCAGG+TGG 0.771466 tig0021410:-32654 Msa1391130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGTTGAACAATCAAAATAGA+TGG - tig0021410:32115-32134 Msa1391130:CDS 25.0%
! AGTTGAACAATCAAAATAGA+TGG - tig0021410:32115-32134 Msa1391130:CDS 25.0%
CACCTATCGTTAATGAAAAA+CGG - tig0021410:32239-32258 Msa1391130:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + tig0021410:32280-32299 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG + tig0021410:32728-32747 None:intergenic 30.0%
CACCTATCGTTAATGAAAAA+CGG - tig0021410:32239-32258 Msa1391130:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + tig0021410:32280-32299 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG + tig0021410:32728-32747 None:intergenic 30.0%
! CATATTGACTAGTCAATGTC+AGG - tig0021410:31989-32008 Msa1391130:CDS 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + tig0021410:32244-32263 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG + tig0021410:32720-32739 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG + tig0021410:32729-32748 None:intergenic 35.0%
AAAGTCGTAAGACCATGTAT+GGG + tig0021410:33355-33374 None:intergenic 35.0%
! CATATTGACTAGTCAATGTC+AGG - tig0021410:31989-32008 Msa1391130:CDS 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + tig0021410:32244-32263 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG + tig0021410:32720-32739 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG + tig0021410:32729-32748 None:intergenic 35.0%
AAAGTCGTAAGACCATGTAT+GGG + tig0021410:33355-33374 None:intergenic 35.0%
TCGTTCATGGTTCGATATTC+TGG + tig0021410:31948-31967 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - tig0021410:31953-31972 Msa1391130:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + tig0021410:31961-31980 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + tig0021410:32053-32072 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - tig0021410:32053-32072 Msa1391130:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - tig0021410:32140-32159 Msa1391130:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG + tig0021410:32147-32166 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - tig0021410:32156-32175 Msa1391130:CDS 40.0%
AGAACAAGGTTCAAGTCTAC+CGG - tig0021410:32170-32189 Msa1391130:intron 40.0%
CATTAACGATAGGTGTCAAG+TGG + tig0021410:32234-32253 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + tig0021410:32274-32293 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG - tig0021410:32377-32396 Msa1391130:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + tig0021410:32625-32644 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - tig0021410:32734-32753 Msa1391130:CDS 40.0%
TCAGGTAGACAGTTTCTATG+GGG + tig0021410:32922-32941 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + tig0021410:32923-32942 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + tig0021410:32924-32943 None:intergenic 40.0%
TAGACATGTCTGTGAAGATG+CGG + tig0021410:33136-33155 None:intergenic 40.0%
AAGGTAGCGAAATTCCTTGT+CGG + tig0021410:33225-33244 None:intergenic 40.0%
ACAAGGAATTTCGCTACCTT+AGG - tig0021410:33225-33244 Msa1391130:intron 40.0%
CCTTAGGACCGTTATAGTTA+CGG - tig0021410:33241-33260 Msa1391130:intron 40.0%
AAGTCGTAAGACCATGTATG+GGG + tig0021410:33354-33373 None:intergenic 40.0%
CAAAGTCGTAAGACCATGTA+TGG + tig0021410:33356-33375 None:intergenic 40.0%
! TACATGGTCTTACGACTTTG+CGG - tig0021410:33356-33375 Msa1391130:CDS 40.0%
TCGTTCATGGTTCGATATTC+TGG + tig0021410:31948-31967 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - tig0021410:31953-31972 Msa1391130:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + tig0021410:31961-31980 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + tig0021410:32053-32072 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - tig0021410:32053-32072 Msa1391130:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - tig0021410:32140-32159 Msa1391130:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG + tig0021410:32147-32166 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - tig0021410:32156-32175 Msa1391130:CDS 40.0%
AGAACAAGGTTCAAGTCTAC+CGG - tig0021410:32170-32189 Msa1391130:intron 40.0%
CATTAACGATAGGTGTCAAG+TGG + tig0021410:32234-32253 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + tig0021410:32274-32293 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG - tig0021410:32377-32396 Msa1391130:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + tig0021410:32625-32644 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - tig0021410:32734-32753 Msa1391130:CDS 40.0%
TCAGGTAGACAGTTTCTATG+GGG + tig0021410:32922-32941 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + tig0021410:32923-32942 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + tig0021410:32924-32943 None:intergenic 40.0%
TAGACATGTCTGTGAAGATG+CGG + tig0021410:33136-33155 None:intergenic 40.0%
AAGGTAGCGAAATTCCTTGT+CGG + tig0021410:33225-33244 None:intergenic 40.0%
ACAAGGAATTTCGCTACCTT+AGG - tig0021410:33225-33244 Msa1391130:intron 40.0%
CCTTAGGACCGTTATAGTTA+CGG - tig0021410:33241-33260 Msa1391130:intron 40.0%
AAGTCGTAAGACCATGTATG+GGG + tig0021410:33354-33373 None:intergenic 40.0%
CAAAGTCGTAAGACCATGTA+TGG + tig0021410:33356-33375 None:intergenic 40.0%
! TACATGGTCTTACGACTTTG+CGG - tig0021410:33356-33375 Msa1391130:CDS 40.0%
GTTCGATATTCTGGTGTCCT+AGG + tig0021410:31939-31958 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - tig0021410:32006-32025 Msa1391130:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - tig0021410:32011-32030 Msa1391130:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + tig0021410:32016-32035 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + tig0021410:32054-32073 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - tig0021410:32052-32071 Msa1391130:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + tig0021410:32058-32077 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - tig0021410:32057-32076 Msa1391130:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - tig0021410:32058-32077 Msa1391130:CDS 45.0%
TTCAAGTCTACCGGTCTGTT+AGG - tig0021410:32179-32198 Msa1391130:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG + tig0021410:32208-32227 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG - tig0021410:32376-32395 Msa1391130:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG - tig0021410:32378-32397 Msa1391130:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - tig0021410:32459-32478 Msa1391130:CDS 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + tig0021410:32592-32611 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - tig0021410:32592-32611 Msa1391130:CDS 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + tig0021410:32626-32645 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + tig0021410:32630-32649 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + tig0021410:32631-32650 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - tig0021410:32630-32649 Msa1391130:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - tig0021410:32975-32994 Msa1391130:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG + tig0021410:33085-33104 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG + tig0021410:33086-33105 None:intergenic 45.0%
AGGGAACAGTGAAGCTTCAT+AGG - tig0021410:33085-33104 Msa1391130:intron 45.0%
GGGAACAGTGAAGCTTCATA+GGG - tig0021410:33086-33105 Msa1391130:intron 45.0%
TTCATAGGGTCTTTCTGTCC+AGG - tig0021410:33100-33119 Msa1391130:intron 45.0%
AGGTAGCGAAATTCCTTGTC+GGG + tig0021410:33224-33243 None:intergenic 45.0%
CCGTAACTATAACGGTCCTA+AGG + tig0021410:33244-33263 None:intergenic 45.0%
!! AAGTTGGTGACCTGATGACA+GGG + tig0021410:33299-33318 None:intergenic 45.0%
CACCAACTTCCTTAACCTTC+CGG - tig0021410:33310-33329 Msa1391130:intron 45.0%
AGTCGTAAGACCATGTATGG+GGG + tig0021410:33353-33372 None:intergenic 45.0%
! TTTGCGGAGACCTGTGTTTT+TGG - tig0021410:33372-33391 Msa1391130:CDS 45.0%
GTTCGATATTCTGGTGTCCT+AGG + tig0021410:31939-31958 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - tig0021410:32006-32025 Msa1391130:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - tig0021410:32011-32030 Msa1391130:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + tig0021410:32016-32035 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + tig0021410:32054-32073 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - tig0021410:32052-32071 Msa1391130:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + tig0021410:32058-32077 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - tig0021410:32057-32076 Msa1391130:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - tig0021410:32058-32077 Msa1391130:CDS 45.0%
TTCAAGTCTACCGGTCTGTT+AGG - tig0021410:32179-32198 Msa1391130:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG + tig0021410:32208-32227 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG - tig0021410:32376-32395 Msa1391130:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG - tig0021410:32378-32397 Msa1391130:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - tig0021410:32459-32478 Msa1391130:CDS 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + tig0021410:32592-32611 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - tig0021410:32592-32611 Msa1391130:CDS 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + tig0021410:32626-32645 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + tig0021410:32630-32649 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + tig0021410:32631-32650 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - tig0021410:32630-32649 Msa1391130:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - tig0021410:32975-32994 Msa1391130:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG + tig0021410:33085-33104 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG + tig0021410:33086-33105 None:intergenic 45.0%
AGGGAACAGTGAAGCTTCAT+AGG - tig0021410:33085-33104 Msa1391130:intron 45.0%
GGGAACAGTGAAGCTTCATA+GGG - tig0021410:33086-33105 Msa1391130:intron 45.0%
TTCATAGGGTCTTTCTGTCC+AGG - tig0021410:33100-33119 Msa1391130:intron 45.0%
AGGTAGCGAAATTCCTTGTC+GGG + tig0021410:33224-33243 None:intergenic 45.0%
CCGTAACTATAACGGTCCTA+AGG + tig0021410:33244-33263 None:intergenic 45.0%
!! AAGTTGGTGACCTGATGACA+GGG + tig0021410:33299-33318 None:intergenic 45.0%
CACCAACTTCCTTAACCTTC+CGG - tig0021410:33310-33329 Msa1391130:intron 45.0%
AGTCGTAAGACCATGTATGG+GGG + tig0021410:33353-33372 None:intergenic 45.0%
! TTTGCGGAGACCTGTGTTTT+TGG - tig0021410:33372-33391 Msa1391130:CDS 45.0%
TTGACTGGAGAGGACACCAA+AGG - tig0021410:32021-32040 Msa1391130:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + tig0021410:32062-32081 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - tig0021410:32059-32078 Msa1391130:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - tig0021410:32060-32079 Msa1391130:CDS 50.0%
CAGAGAACCCATCGCTGTTT+CGG - tig0021410:32324-32343 Msa1391130:intron 50.0%
ATCACAGCCGAAACAGCGAT+GGG + tig0021410:32334-32353 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG + tig0021410:32335-32354 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + tig0021410:32466-32485 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + tig0021410:32506-32525 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + tig0021410:32556-32575 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + tig0021410:32567-32586 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + tig0021410:32593-32612 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - tig0021410:32591-32610 Msa1391130:CDS 50.0%
GAACATACTACAGCTCCAGG+TGG - tig0021410:32633-32652 Msa1391130:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG + tig0021410:32666-32685 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + tig0021410:32898-32917 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + tig0021410:32916-32935 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + tig0021410:32951-32970 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + tig0021410:32992-33011 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - tig0021410:32989-33008 Msa1391130:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG + tig0021410:33037-33056 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG - tig0021410:33065-33084 Msa1391130:intron 50.0%
AAAGCCCAAAGCCAATCCCA+GGG - tig0021410:33066-33085 Msa1391130:intron 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG + tig0021410:33073-33092 None:intergenic 50.0%
! TAACGATCTGGGCACTGTCT+CGG + tig0021410:33176-33195 None:intergenic 50.0%
! CACGAAAGGCGTAACGATCT+GGG + tig0021410:33187-33206 None:intergenic 50.0%
AGATCGTTACGCCTTTCGTG+CGG - tig0021410:33187-33206 Msa1391130:CDS 50.0%
AACGGCGGCCGTAACTATAA+CGG + tig0021410:33252-33271 None:intergenic 50.0%
!! GAAGTTGGTGACCTGATGAC+AGG + tig0021410:33300-33319 None:intergenic 50.0%
TGCCGGAAGGTTAAGGAAGT+TGG + tig0021410:33315-33334 None:intergenic 50.0%
TTCCTTAACCTTCCGGCACT+GGG - tig0021410:33317-33336 Msa1391130:intron 50.0%
TTGACTGGAGAGGACACCAA+AGG - tig0021410:32021-32040 Msa1391130:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + tig0021410:32062-32081 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - tig0021410:32059-32078 Msa1391130:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - tig0021410:32060-32079 Msa1391130:CDS 50.0%
CAGAGAACCCATCGCTGTTT+CGG - tig0021410:32324-32343 Msa1391130:intron 50.0%
ATCACAGCCGAAACAGCGAT+GGG + tig0021410:32334-32353 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG + tig0021410:32335-32354 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + tig0021410:32466-32485 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + tig0021410:32506-32525 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + tig0021410:32556-32575 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + tig0021410:32567-32586 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + tig0021410:32593-32612 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - tig0021410:32591-32610 Msa1391130:CDS 50.0%
GAACATACTACAGCTCCAGG+TGG - tig0021410:32633-32652 Msa1391130:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG + tig0021410:32666-32685 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + tig0021410:32898-32917 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + tig0021410:32916-32935 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + tig0021410:32951-32970 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + tig0021410:32992-33011 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - tig0021410:32989-33008 Msa1391130:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG + tig0021410:33037-33056 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG - tig0021410:33065-33084 Msa1391130:intron 50.0%
AAAGCCCAAAGCCAATCCCA+GGG - tig0021410:33066-33085 Msa1391130:intron 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG + tig0021410:33073-33092 None:intergenic 50.0%
! TAACGATCTGGGCACTGTCT+CGG + tig0021410:33176-33195 None:intergenic 50.0%
! CACGAAAGGCGTAACGATCT+GGG + tig0021410:33187-33206 None:intergenic 50.0%
AGATCGTTACGCCTTTCGTG+CGG - tig0021410:33187-33206 Msa1391130:CDS 50.0%
AACGGCGGCCGTAACTATAA+CGG + tig0021410:33252-33271 None:intergenic 50.0%
!! GAAGTTGGTGACCTGATGAC+AGG + tig0021410:33300-33319 None:intergenic 50.0%
TGCCGGAAGGTTAAGGAAGT+TGG + tig0021410:33315-33334 None:intergenic 50.0%
TTCCTTAACCTTCCGGCACT+GGG - tig0021410:33317-33336 Msa1391130:intron 50.0%
TTCTGGTGTCCTAGGCGTAG+AGG + tig0021410:31931-31950 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG + tig0021410:32063-32082 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - tig0021410:32067-32086 Msa1391130:CDS 55.0%
! GCTGAGGCATCCTAACAGAC+CGG + tig0021410:32192-32211 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG - tig0021410:32299-32318 Msa1391130:intron 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG - tig0021410:32300-32319 Msa1391130:intron 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG - tig0021410:32336-32355 Msa1391130:intron 55.0%
TGTTTCGGCTGTGATACCGG+AGG - tig0021410:32339-32358 Msa1391130:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - tig0021410:32382-32401 Msa1391130:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + tig0021410:32442-32461 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + tig0021410:32455-32474 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + tig0021410:32456-32475 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - tig0021410:32470-32489 Msa1391130:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - tig0021410:32500-32519 Msa1391130:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + tig0021410:32505-32524 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - tig0021410:32505-32524 Msa1391130:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + tig0021410:32511-32530 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + tig0021410:32532-32551 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - tig0021410:32534-32553 Msa1391130:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - tig0021410:32540-32559 Msa1391130:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + tig0021410:32550-32569 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + tig0021410:32551-32570 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + tig0021410:32605-32624 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + tig0021410:32680-32699 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + tig0021410:32685-32704 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - tig0021410:32684-32703 Msa1391130:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - tig0021410:32685-32704 Msa1391130:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG + tig0021410:32690-32709 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + tig0021410:32775-32794 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + tig0021410:32836-32855 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - tig0021410:32834-32853 Msa1391130:intron 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + tig0021410:32844-32863 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + tig0021410:32867-32886 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + tig0021410:32875-32894 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + tig0021410:32876-32895 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + tig0021410:32885-32904 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - tig0021410:32886-32905 Msa1391130:intron 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - tig0021410:32887-32906 Msa1391130:intron 55.0%
GTCTACCTGAGACTGTCCCT+TGG - tig0021410:32932-32951 Msa1391130:CDS 55.0%
ACAGACCAAGGGACAGTCTC+AGG + tig0021410:32940-32959 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - tig0021410:32942-32961 Msa1391130:CDS 55.0%
CCTTGTGCCAGTACAGACCA+AGG + tig0021410:32952-32971 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - tig0021410:32949-32968 Msa1391130:CDS 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + tig0021410:33026-33045 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG + tig0021410:33050-33069 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG + tig0021410:33074-33093 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG + tig0021410:33080-33099 None:intergenic 55.0%
! GCACGAAAGGCGTAACGATC+TGG + tig0021410:33188-33207 None:intergenic 55.0%
GATCGTTACGCCTTTCGTGC+GGG - tig0021410:33188-33207 Msa1391130:CDS 55.0%
TAAGTTCCGACCCGCACGAA+AGG + tig0021410:33201-33220 None:intergenic 55.0%
TGACCTGATGACAGGGAAGC+CGG + tig0021410:33292-33311 None:intergenic 55.0%
CTTCCTTAACCTTCCGGCAC+TGG - tig0021410:33316-33335 Msa1391130:intron 55.0%
TTCTGGTGTCCTAGGCGTAG+AGG + tig0021410:31931-31950 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG + tig0021410:32063-32082 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - tig0021410:32067-32086 Msa1391130:CDS 55.0%
! GCTGAGGCATCCTAACAGAC+CGG + tig0021410:32192-32211 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG - tig0021410:32299-32318 Msa1391130:intron 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG - tig0021410:32300-32319 Msa1391130:intron 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG - tig0021410:32336-32355 Msa1391130:intron 55.0%
TGTTTCGGCTGTGATACCGG+AGG - tig0021410:32339-32358 Msa1391130:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - tig0021410:32382-32401 Msa1391130:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + tig0021410:32442-32461 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + tig0021410:32455-32474 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + tig0021410:32456-32475 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - tig0021410:32470-32489 Msa1391130:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - tig0021410:32500-32519 Msa1391130:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + tig0021410:32505-32524 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - tig0021410:32505-32524 Msa1391130:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + tig0021410:32511-32530 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + tig0021410:32532-32551 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - tig0021410:32534-32553 Msa1391130:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - tig0021410:32540-32559 Msa1391130:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + tig0021410:32550-32569 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + tig0021410:32551-32570 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + tig0021410:32605-32624 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + tig0021410:32680-32699 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + tig0021410:32685-32704 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - tig0021410:32684-32703 Msa1391130:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - tig0021410:32685-32704 Msa1391130:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG + tig0021410:32690-32709 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + tig0021410:32775-32794 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + tig0021410:32836-32855 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - tig0021410:32834-32853 Msa1391130:intron 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + tig0021410:32844-32863 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + tig0021410:32867-32886 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + tig0021410:32875-32894 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + tig0021410:32876-32895 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + tig0021410:32885-32904 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - tig0021410:32886-32905 Msa1391130:intron 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - tig0021410:32887-32906 Msa1391130:intron 55.0%
GTCTACCTGAGACTGTCCCT+TGG - tig0021410:32932-32951 Msa1391130:CDS 55.0%
ACAGACCAAGGGACAGTCTC+AGG + tig0021410:32940-32959 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - tig0021410:32942-32961 Msa1391130:CDS 55.0%
CCTTGTGCCAGTACAGACCA+AGG + tig0021410:32952-32971 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - tig0021410:32949-32968 Msa1391130:CDS 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + tig0021410:33026-33045 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG + tig0021410:33050-33069 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG + tig0021410:33074-33093 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG + tig0021410:33080-33099 None:intergenic 55.0%
! GCACGAAAGGCGTAACGATC+TGG + tig0021410:33188-33207 None:intergenic 55.0%
GATCGTTACGCCTTTCGTGC+GGG - tig0021410:33188-33207 Msa1391130:CDS 55.0%
TAAGTTCCGACCCGCACGAA+AGG + tig0021410:33201-33220 None:intergenic 55.0%
TGACCTGATGACAGGGAAGC+CGG + tig0021410:33292-33311 None:intergenic 55.0%
CTTCCTTAACCTTCCGGCAC+TGG - tig0021410:33316-33335 Msa1391130:intron 55.0%
GGTGTGGTTCCTCTACGCCT+AGG - tig0021410:31919-31938 Msa1391130:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG + tig0021410:32040-32059 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + tig0021410:32047-32066 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - tig0021410:32073-32092 Msa1391130:CDS 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG - tig0021410:32301-32320 Msa1391130:intron 60.0%
GCTGTGATACCGGAGGCTCT+GGG - tig0021410:32346-32365 Msa1391130:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - tig0021410:32347-32366 Msa1391130:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG - tig0021410:32360-32379 Msa1391130:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - tig0021410:32381-32400 Msa1391130:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - tig0021410:32426-32445 Msa1391130:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - tig0021410:32447-32466 Msa1391130:CDS 60.0%
CTAGTACGAGAGGACCGGGA+AGG + tig0021410:32501-32520 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - tig0021410:32499-32518 Msa1391130:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + tig0021410:32689-32708 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - tig0021410:32686-32705 Msa1391130:CDS 60.0%
TCGGCACCGTCGGATCACTA+AGG - tig0021410:32766-32785 Msa1391130:CDS 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + tig0021410:32792-32811 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - tig0021410:32790-32809 Msa1391130:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - tig0021410:32791-32810 Msa1391130:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - tig0021410:32833-32852 Msa1391130:intron 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + tig0021410:32837-32856 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - tig0021410:32890-32909 Msa1391130:intron 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + tig0021410:32895-32914 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + tig0021410:33022-33041 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + tig0021410:33023-33042 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + tig0021410:33024-33043 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + tig0021410:33025-33044 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG + tig0021410:33046-33065 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG + tig0021410:33053-33072 None:intergenic 60.0%
GGGTCTTTCTGTCCAGGTGC+AGG - tig0021410:33106-33125 Msa1391130:intron 60.0%
! AGATGCGGACTACCTGCACC+TGG + tig0021410:33121-33140 None:intergenic 60.0%
CACTGTCTCGGAGAGAGGCT+CGG + tig0021410:33164-33183 None:intergenic 60.0%
GTTACGCCTTTCGTGCGGGT+CGG - tig0021410:33192-33211 Msa1391130:CDS 60.0%
GGGTCGGAACTTACCCGACA+AGG - tig0021410:33208-33227 Msa1391130:intron 60.0%
TAGTTACGGCCGCCGTTCAC+CGG - tig0021410:33255-33274 Msa1391130:intron 60.0%
! TGCCCAGTGCCGGAAGGTTA+AGG + tig0021410:33322-33341 None:intergenic 60.0%
! TTAACCTTCCGGCACTGGGC+AGG - tig0021410:33321-33340 Msa1391130:intron 60.0%
GGTGTGGTTCCTCTACGCCT+AGG - tig0021410:31919-31938 Msa1391130:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG + tig0021410:32040-32059 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + tig0021410:32047-32066 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - tig0021410:32073-32092 Msa1391130:CDS 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG - tig0021410:32301-32320 Msa1391130:intron 60.0%
GCTGTGATACCGGAGGCTCT+GGG - tig0021410:32346-32365 Msa1391130:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - tig0021410:32347-32366 Msa1391130:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG - tig0021410:32360-32379 Msa1391130:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - tig0021410:32381-32400 Msa1391130:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - tig0021410:32426-32445 Msa1391130:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - tig0021410:32447-32466 Msa1391130:CDS 60.0%
CTAGTACGAGAGGACCGGGA+AGG + tig0021410:32501-32520 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - tig0021410:32499-32518 Msa1391130:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + tig0021410:32689-32708 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - tig0021410:32686-32705 Msa1391130:CDS 60.0%
TCGGCACCGTCGGATCACTA+AGG - tig0021410:32766-32785 Msa1391130:CDS 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + tig0021410:32792-32811 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - tig0021410:32790-32809 Msa1391130:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - tig0021410:32791-32810 Msa1391130:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - tig0021410:32833-32852 Msa1391130:intron 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + tig0021410:32837-32856 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - tig0021410:32890-32909 Msa1391130:intron 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + tig0021410:32895-32914 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + tig0021410:33022-33041 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + tig0021410:33023-33042 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + tig0021410:33024-33043 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + tig0021410:33025-33044 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG + tig0021410:33046-33065 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG + tig0021410:33053-33072 None:intergenic 60.0%
GGGTCTTTCTGTCCAGGTGC+AGG - tig0021410:33106-33125 Msa1391130:intron 60.0%
! AGATGCGGACTACCTGCACC+TGG + tig0021410:33121-33140 None:intergenic 60.0%
CACTGTCTCGGAGAGAGGCT+CGG + tig0021410:33164-33183 None:intergenic 60.0%
GTTACGCCTTTCGTGCGGGT+CGG - tig0021410:33192-33211 Msa1391130:CDS 60.0%
GGGTCGGAACTTACCCGACA+AGG - tig0021410:33208-33227 Msa1391130:intron 60.0%
TAGTTACGGCCGCCGTTCAC+CGG - tig0021410:33255-33274 Msa1391130:intron 60.0%
! TGCCCAGTGCCGGAAGGTTA+AGG + tig0021410:33322-33341 None:intergenic 60.0%
! TTAACCTTCCGGCACTGGGC+AGG - tig0021410:33321-33340 Msa1391130:intron 60.0%
ATGGGTTCTCTGCCCCTGCG+GGG + tig0021410:32316-32335 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + tig0021410:32317-32336 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + tig0021410:32318-32337 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - tig0021410:32345-32364 Msa1391130:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - tig0021410:32354-32373 Msa1391130:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + tig0021410:32358-32377 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + tig0021410:32437-32456 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - tig0021410:32484-32503 Msa1391130:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - tig0021410:32611-32630 Msa1391130:CDS 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + tig0021410:32651-32670 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - tig0021410:32652-32671 Msa1391130:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG + tig0021410:32746-32765 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG - tig0021410:32747-32766 Msa1391130:CDS 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG + tig0021410:32760-32779 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG + tig0021410:32761-32780 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG + tig0021410:32765-32784 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - tig0021410:32794-32813 Msa1391130:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - tig0021410:32795-32814 Msa1391130:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG + tig0021410:32803-32822 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - tig0021410:32849-32868 Msa1391130:intron 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + tig0021410:32860-32879 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + tig0021410:32904-32923 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG + tig0021410:33021-33040 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG - tig0021410:33042-33061 Msa1391130:intron 65.0%
! CTGGGCACTGTCTCGGAGAG+AGG + tig0021410:33169-33188 None:intergenic 65.0%
AGTTACGGCCGCCGTTCACC+GGG - tig0021410:33256-33275 Msa1391130:intron 65.0%
!! TCGCCGGCTTCCCTGTCATC+AGG - tig0021410:33286-33305 Msa1391130:intron 65.0%
CAGGCGTCAGCCCCCATACA+TGG - tig0021410:33340-33359 Msa1391130:intron 65.0%
ATGGGTTCTCTGCCCCTGCG+GGG + tig0021410:32316-32335 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + tig0021410:32317-32336 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + tig0021410:32318-32337 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - tig0021410:32345-32364 Msa1391130:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - tig0021410:32354-32373 Msa1391130:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + tig0021410:32358-32377 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + tig0021410:32437-32456 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - tig0021410:32484-32503 Msa1391130:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - tig0021410:32611-32630 Msa1391130:CDS 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + tig0021410:32651-32670 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - tig0021410:32652-32671 Msa1391130:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG + tig0021410:32746-32765 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG - tig0021410:32747-32766 Msa1391130:CDS 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG + tig0021410:32760-32779 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG + tig0021410:32761-32780 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG + tig0021410:32765-32784 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - tig0021410:32794-32813 Msa1391130:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - tig0021410:32795-32814 Msa1391130:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG + tig0021410:32803-32822 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - tig0021410:32849-32868 Msa1391130:intron 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + tig0021410:32860-32879 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + tig0021410:32904-32923 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG + tig0021410:33021-33040 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG - tig0021410:33042-33061 Msa1391130:intron 65.0%
! CTGGGCACTGTCTCGGAGAG+AGG + tig0021410:33169-33188 None:intergenic 65.0%
AGTTACGGCCGCCGTTCACC+GGG - tig0021410:33256-33275 Msa1391130:intron 65.0%
!! TCGCCGGCTTCCCTGTCATC+AGG - tig0021410:33286-33305 Msa1391130:intron 65.0%
CAGGCGTCAGCCCCCATACA+TGG - tig0021410:33340-33359 Msa1391130:intron 65.0%
GTTCTCTGCCCCTGCGGGGA+TGG + tig0021410:32312-32331 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + tig0021410:32489-32508 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG - tig0021410:32756-32775 Msa1391130:CDS 70.0%
GCAAGACCCACCCGTCGAGC+AGG + tig0021410:32804-32823 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - tig0021410:32856-32875 Msa1391130:intron 70.0%
ACTGATGGCTCGAGCCCCCC+CGG - tig0021410:33004-33023 Msa1391130:intron 70.0%
GTTACGGCCGCCGTTCACCG+GGG - tig0021410:33257-33276 Msa1391130:intron 70.0%
ACCGAAGCCCCGGTGAACGG+CGG + tig0021410:33267-33286 None:intergenic 70.0%
GCGACCGAAGCCCCGGTGAA+CGG + tig0021410:33270-33289 None:intergenic 70.0%
TTCACCGGGGCTTCGGTCGC+CGG - tig0021410:33270-33289 Msa1391130:intron 70.0%
GTTCTCTGCCCCTGCGGGGA+TGG + tig0021410:32312-32331 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + tig0021410:32489-32508 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG - tig0021410:32756-32775 Msa1391130:CDS 70.0%
GCAAGACCCACCCGTCGAGC+AGG + tig0021410:32804-32823 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - tig0021410:32856-32875 Msa1391130:intron 70.0%
ACTGATGGCTCGAGCCCCCC+CGG - tig0021410:33004-33023 Msa1391130:intron 70.0%
GTTACGGCCGCCGTTCACCG+GGG - tig0021410:33257-33276 Msa1391130:intron 70.0%
ACCGAAGCCCCGGTGAACGG+CGG + tig0021410:33267-33286 None:intergenic 70.0%
GCGACCGAAGCCCCGGTGAA+CGG + tig0021410:33270-33289 None:intergenic 70.0%
TTCACCGGGGCTTCGGTCGC+CGG - tig0021410:33270-33289 Msa1391130:intron 70.0%
ATGGCTCGAGCCCCCCCGGA+AGG - tig0021410:33008-33027 Msa1391130:intron 75.0%
GCCGCCGTTCACCGGGGCTT+CGG - tig0021410:33263-33282 Msa1391130:intron 75.0%
GAAGCCGGCGACCGAAGCCC+CGG + tig0021410:33277-33296 None:intergenic 75.0%
! GACGCCTGCCCAGTGCCGGA+AGG + tig0021410:33328-33347 None:intergenic 75.0%
GGCTGACGCCTGCCCAGTGC+CGG + tig0021410:33332-33351 None:intergenic 75.0%
ATGGCTCGAGCCCCCCCGGA+AGG - tig0021410:33008-33027 Msa1391130:intron 75.0%
GCCGCCGTTCACCGGGGCTT+CGG - tig0021410:33263-33282 Msa1391130:intron 75.0%
GAAGCCGGCGACCGAAGCCC+CGG + tig0021410:33277-33296 None:intergenic 75.0%
! GACGCCTGCCCAGTGCCGGA+AGG + tig0021410:33328-33347 None:intergenic 75.0%
GGCTGACGCCTGCCCAGTGC+CGG + tig0021410:33332-33351 None:intergenic 75.0%
! GCTCGAGCCCCCCCGGAAGG+AGG - tig0021410:33011-33030 Msa1391130:intron 80.0%
! GCTCGAGCCCCCCCGGAAGG+AGG - tig0021410:33011-33030 Msa1391130:intron 80.0%
Chromosome Type Strat End Strand Name
tig0021410 gene 31912 33397 31912 ID=Msa1391130;Name=Msa1391130
tig0021410 mRNA 31912 33397 31912 ID=Msa1391130-mRNA-1;Parent=Msa1391130;Name=Msa1391130-mRNA-1;_AED=0.47;_eAED=0.48;_QI=0|0|0|0.5|1|1|6|0|280
tig0021410 exon 33341 33397 33341 ID=Msa1391130-mRNA-1:exon:12556;Parent=Msa1391130-mRNA-1
tig0021410 exon 33148 33222 33148 ID=Msa1391130-mRNA-1:exon:12555;Parent=Msa1391130-mRNA-1
tig0021410 exon 32910 32988 32910 ID=Msa1391130-mRNA-1:exon:12554;Parent=Msa1391130-mRNA-1
tig0021410 exon 32578 32788 32578 ID=Msa1391130-mRNA-1:exon:12553;Parent=Msa1391130-mRNA-1
tig0021410 exon 32339 32483 32339 ID=Msa1391130-mRNA-1:exon:12552;Parent=Msa1391130-mRNA-1
tig0021410 exon 31912 32187 31912 ID=Msa1391130-mRNA-1:exon:12551;Parent=Msa1391130-mRNA-1
tig0021410 CDS 33341 33397 33341 ID=Msa1391130-mRNA-1:cds;Parent=Msa1391130-mRNA-1
tig0021410 CDS 33148 33222 33148 ID=Msa1391130-mRNA-1:cds;Parent=Msa1391130-mRNA-1
tig0021410 CDS 32910 32988 32910 ID=Msa1391130-mRNA-1:cds;Parent=Msa1391130-mRNA-1
tig0021410 CDS 32578 32788 32578 ID=Msa1391130-mRNA-1:cds;Parent=Msa1391130-mRNA-1
tig0021410 CDS 32339 32483 32339 ID=Msa1391130-mRNA-1:cds;Parent=Msa1391130-mRNA-1
tig0021410 CDS 31912 32187 31912 ID=Msa1391130-mRNA-1:cds;Parent=Msa1391130-mRNA-1
Gene Sequence

>Msa1391130

ATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAAAGGTTTTGGTTTTTTCATGTTGTCAAAGAGTTGAACAATCAAAATAGATGGCGATTGCCTGATCGAATTGATCAGGGGCAGAGAACCCATCGCTGTTTCGGCTGTGATACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGATCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGTCTGTACTGGCACAAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGGTCACCAACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAA

Protein sequence

>Msa1391130

MDWCGSSTPRTPEYRTMNERFWFFHVVKELNNQNRWRLPDRIDQGQRTHRCFGCDTGGSGEVGIGEHSSWGKGPLNALTPTPDMDRTVSRRSEPSSRTALMGEQPNPWNILQLQVAKSRHRGAKPSRRCELLGKISLLSLDQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLGLYWHKVQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLNLPALGRRQPPYMVLRLCGDLCFW*