AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1086770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1086770 MtrunA17_Chr4g0016151 100.000 82 0 0 183 264 1 82 2.79e-55 172
Msa1086770 MtrunA17_CPg0492351 100.000 82 0 0 183 264 1 82 2.79e-55 172
Msa1086770 MtrunA17_Chr4g0000631 98.780 82 1 0 183 264 1 82 1.14e-54 171
Msa1086770 MtrunA17_Chr7g0229411 98.780 82 1 0 183 264 1 82 1.32e-54 171
Msa1086770 MtrunA17_Chr5g0435911 97.561 82 2 0 183 264 1 82 3.78e-53 167
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 117 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACGCCTCCGTTACCTTT+TGG 0.196515 7_2:+87553775 Msa1086770:CDS
CAGCTCACGTACCGCTTTAA+TGG 0.245260 7_2:+87553480 Msa1086770:CDS
AGGGATGGGGACAGAGGTTT+TGG 0.267530 7_2:+87552963 None:intergenic
GGCTGTGATACCGGAGGCTC+TGG 0.279951 7_2:+87553234 Msa1086770:CDS
TCTCAGGTAGACAGTTTCTA+TGG 0.287253 7_2:-87553810 None:intergenic
GCACGAAAGGCGTAACGATC+TGG 0.311741 7_2:-87554074 None:intergenic
TCTAACGCCCACACCGGATA+TGG 0.325084 7_2:+87553429 Msa1086770:CDS
CAGAGAACCCATCGCTGTTT+CGG 0.333458 7_2:+87553213 Msa1086770:CDS
TCCTCGGGCCAGACGGAGAT+TGG 0.349112 7_2:-87553746 None:intergenic
TCCCGTCGATGTGAGCTCTT+GGG 0.355274 7_2:+87553574 Msa1086770:CDS
CACCAACTTCCTTAACCTTC+CGG 0.362818 7_2:+87554199 Msa1086770:CDS
TTCACCGGGGCTTCGGTCGC+CGG 0.371598 7_2:+87554159 Msa1086770:CDS
CAAAGTCGTAAGACCATGTA+TGG 0.380055 7_2:-87554242 None:intergenic
AAAGTTACTCTAGGGATAAC+AGG 0.383241 7_2:-87553606 None:intergenic
CATTAAAGCGGTACGTGAGC+TGG 0.384796 7_2:-87553479 None:intergenic
TTCCCGTCGATGTGAGCTCT+TGG 0.386490 7_2:+87553573 Msa1086770:CDS
AGCTCACGTACCGCTTTAAT+GGG 0.395506 7_2:+87553481 Msa1086770:CDS
GCCGCCGTTCACCGGGGCTT+CGG 0.397671 7_2:+87554152 Msa1086770:CDS
CGCTGTTTCGGCTGTGATAC+CGG 0.403155 7_2:+87553225 Msa1086770:CDS
AATAGGAGAGCACTCATCTT+GGG 0.408942 7_2:+87553266 Msa1086770:CDS
TGCCCAGTGCCGGAAGGTTA+AGG 0.409134 7_2:-87554208 None:intergenic
CCCTTCTGCCTTTGCACTCG+AGG 0.411231 7_2:+87553722 Msa1086770:CDS
CTCACATCGACGGGAAGGTT+TGG 0.420533 7_2:-87553566 None:intergenic
CTTCCTTAACCTTCCGGCAC+TGG 0.422146 7_2:+87554205 Msa1086770:CDS
TGTAGTATGTTCCAAGGGTT+GGG 0.424624 7_2:-87553511 None:intergenic
TAGTTACGGCCGCCGTTCAC+CGG 0.432611 7_2:+87554144 Msa1086770:CDS
GGCTGACGCCTGCCCAGTGC+CGG 0.435469 7_2:-87554218 None:intergenic
TTAACCTTCCGGCACTGGGC+AGG 0.436659 7_2:+87554210 Msa1086770:CDS
AGTTACGGCCGCCGTTCACC+GGG 0.437053 7_2:+87554145 Msa1086770:CDS
AGTTGAACAATCAAAATAGA+TGG 0.442588 7_2:+87553004 Msa1086770:CDS
CTGTAGTATGTTCCAAGGGT+TGG 0.452990 7_2:-87553512 None:intergenic
TCGCCGGCTTCCCTGTCATC+AGG 0.453580 7_2:+87554175 Msa1086770:CDS
GAGACAGTTCGGTCCATATC+CGG 0.455659 7_2:-87553442 None:intergenic
ACAGACCAAGGGACAGTCTC+AGG 0.456050 7_2:-87553826 None:intergenic
CAGAACGTCGTGAGACAGTT+CGG 0.457061 7_2:-87553453 None:intergenic
GAAGCCGGCGACCGAAGCCC+CGG 0.461073 7_2:-87554163 None:intergenic
CCTTCTGCCTTTGCACTCGA+GGG 0.461384 7_2:+87553723 Msa1086770:CDS
GACTGTCCCTTGGTCTGTAC+TGG 0.464231 7_2:+87553831 Msa1086770:CDS
CCCCAAGAGCTCACATCGAC+GGG 0.472021 7_2:-87553575 None:intergenic
TACATGGTCTTACGACTTTG+CGG 0.476001 7_2:+87554245 Msa1086770:CDS
TCCGACTTCCCCAGAGCCTC+CGG 0.480691 7_2:-87553244 None:intergenic
CTCGAGGGCCAATCTCCGTC+TGG 0.480699 7_2:+87553738 Msa1086770:CDS
TGCCGGAAGGTTAAGGAAGT+TGG 0.485164 7_2:-87554201 None:intergenic
GAATAGGAGAGCACTCATCT+TGG 0.487596 7_2:+87553265 Msa1086770:CDS
ACAAGGAATTTCGCTACCTT+AGG 0.488888 7_2:+87554114 Msa1086770:CDS
GGCTCTGGGGAAGTCGGAAT+AGG 0.491163 7_2:+87553249 Msa1086770:CDS
CACGAAAGGCGTAACGATCT+GGG 0.491297 7_2:-87554073 None:intergenic
GAAGTTGGTGACCTGATGAC+AGG 0.495416 7_2:-87554186 None:intergenic
AGGTAGCGAAATTCCTTGTC+GGG 0.495901 7_2:-87554110 None:intergenic
ATTGCCTGATCGAATTGATC+AGG 0.499380 7_2:+87553029 Msa1086770:CDS
TTCCTTAACCTTCCGGCACT+GGG 0.504342 7_2:+87554206 Msa1086770:CDS
GCGACCGAAGCCCCGGTGAA+CGG 0.505900 7_2:-87554156 None:intergenic
CACTGTCTCGGAGAGAGGCT+CGG 0.506062 7_2:-87554050 None:intergenic
GATGTCGGCTCTTCGCCACC+TGG 0.508239 7_2:-87553537 None:intergenic
GCTGTGATACCGGAGGCTCT+GGG 0.508804 7_2:+87553235 Msa1086770:CDS
CTCAGGTAGACAGTTTCTAT+GGG 0.510655 7_2:-87553809 None:intergenic
CCCTCGAGTGCAAAGGCAGA+AGG 0.511073 7_2:-87553723 None:intergenic
AAGGTAGCGAAATTCCTTGT+CGG 0.511527 7_2:-87554111 None:intergenic
TAACGATCTGGGCACTGTCT+CGG 0.513539 7_2:-87554062 None:intergenic
ATGACCTGATCAATTCGATC+AGG 0.514268 7_2:-87553033 None:intergenic
GATCGTTACGCCTTTCGTGC+GGG 0.516913 7_2:+87554077 Msa1086770:CDS
TGACCTGATGACAGGGAAGC+CGG 0.518242 7_2:-87554178 None:intergenic
CCTTAGGACCGTTATAGTTA+CGG 0.519214 7_2:+87554130 Msa1086770:CDS
GAGGCGTGCAAAGGTTTCCT+CGG 0.526013 7_2:-87553762 None:intergenic
AGGCGTGCAAAGGTTTCCTC+GGG 0.527025 7_2:-87553761 None:intergenic
CCCGTCGATGTGAGCTCTTG+GGG 0.534121 7_2:+87553575 Msa1086770:CDS
CCTTGGTCTGTACTGGCACA+AGG 0.538614 7_2:+87553838 Msa1086770:CDS
ATTAAAGCGGTACGTGAGCT+GGG 0.539036 7_2:-87553478 None:intergenic
CTGGGCACTGTCTCGGAGAG+AGG 0.542198 7_2:-87554055 None:intergenic
AAGGTTTGGCACCTCGATGT+CGG 0.545826 7_2:-87553552 None:intergenic
TGGGCGAACAGCCCAACCCT+TGG 0.548090 7_2:+87553500 Msa1086770:CDS
TCCCCAAGAGCTCACATCGA+CGG 0.555494 7_2:-87553576 None:intergenic
AAAGTCGTAAGACCATGTAT+GGG 0.556989 7_2:-87554241 None:intergenic
GCCAATCTCCGTCTGGCCCG+AGG 0.562208 7_2:+87553745 Msa1086770:CDS
TGGAGCTGTAGTATGTTCCA+AGG 0.564153 7_2:-87553517 None:intergenic
ACCGAAGCCCCGGTGAACGG+CGG 0.564471 7_2:-87554153 None:intergenic
AGATCGTTACGCCTTTCGTG+CGG 0.565799 7_2:+87554076 Msa1086770:CDS
ACCGGAGGCTCTGGGGAAGT+CGG 0.567230 7_2:+87553243 Msa1086770:CDS
GACGCCTGCCCAGTGCCGGA+AGG 0.568365 7_2:-87554214 None:intergenic
TATCACAGCCGAAACAGCGA+TGG 0.574058 7_2:-87553221 None:intergenic
CCGTAACTATAACGGTCCTA+AGG 0.574485 7_2:-87554130 None:intergenic
TTGGAACATACTACAGCTCC+AGG 0.579135 7_2:+87553519 Msa1086770:CDS
TAAGTTCCGACCCGCACGAA+AGG 0.581321 7_2:-87554087 None:intergenic
GTCTACCTGAGACTGTCCCT+TGG 0.586612 7_2:+87553821 Msa1086770:CDS
AAGGTAACGGAGGCGTGCAA+AGG 0.595805 7_2:-87553771 None:intergenic
CCTCGAGTGCAAAGGCAGAA+GGG 0.595841 7_2:-87553722 None:intergenic
AAAGGTTTCCTCGGGCCAGA+CGG 0.597813 7_2:-87553753 None:intergenic
CTGTGATACCGGAGGCTCTG+GGG 0.598997 7_2:+87553236 Msa1086770:CDS
AACGGCGGCCGTAACTATAA+CGG 0.599287 7_2:-87554138 None:intergenic
GTTACGCCTTTCGTGCGGGT+CGG 0.605304 7_2:+87554081 Msa1086770:CDS
TGGGGCGTAGGCCTCCCAAA+AGG 0.606913 7_2:-87553790 None:intergenic
GTTCGGTCCATATCCGGTGT+GGG 0.608178 7_2:-87553436 None:intergenic
AAGAGCTCACATCGACGGGA+AGG 0.613365 7_2:-87553571 None:intergenic
AGTTCGGTCCATATCCGGTG+TGG 0.618273 7_2:-87553437 None:intergenic
GGGCTGTTCGCCCATTAAAG+CGG 0.619701 7_2:-87553491 None:intergenic
ATCACAGCCGAAACAGCGAT+GGG 0.621115 7_2:-87553220 None:intergenic
AAGTCGTAAGACCATGTATG+GGG 0.621859 7_2:-87554240 None:intergenic
AGACAGTTTCTATGGGGCGT+AGG 0.622986 7_2:-87553802 None:intergenic
ATAGGAGAGCACTCATCTTG+GGG 0.623240 7_2:+87553267 Msa1086770:CDS
AAGTTGGTGACCTGATGACA+GGG 0.627282 7_2:-87554185 None:intergenic
TATTCAAGGGATGGGGACAG+AGG 0.629665 7_2:+87552957 None:intergenic
GTAGGCCTCCCAAAAGGTAA+CGG 0.632223 7_2:-87553784 None:intergenic
GGAGCTGTAGTATGTTCCAA+GGG 0.640199 7_2:-87553516 None:intergenic
TAGACATGTCTGTGAAGATG+CGG 0.645281 7_2:-87554022 None:intergenic
CCTTGTGCCAGTACAGACCA+AGG 0.645647 7_2:-87553838 None:intergenic
GGGTCGGAACTTACCCGACA+AGG 0.655880 7_2:+87554097 Msa1086770:CDS
CAATGCTCTAACGCCCACAC+CGG 0.666176 7_2:+87553423 Msa1086770:CDS
AGATTGGCCCTCGAGTGCAA+AGG 0.670375 7_2:-87553730 None:intergenic
GGCCTCCCAAAAGGTAACGG+AGG 0.683463 7_2:-87553781 None:intergenic
AGTCGTAAGACCATGTATGG+GGG 0.686647 7_2:-87554239 None:intergenic
CTTGTGCCAGTACAGACCAA+GGG 0.693537 7_2:-87553837 None:intergenic
GTGGGCGTTAGAGCATTGAG+AGG 0.697492 7_2:-87553418 None:intergenic
GTGGCGAAGAGCCGACATCG+AGG 0.704477 7_2:+87553541 Msa1086770:CDS
TGTTTCGGCTGTGATACCGG+AGG 0.717886 7_2:+87553228 Msa1086770:CDS
TCAGGTAGACAGTTTCTATG+GGG 0.720720 7_2:-87553808 None:intergenic
GTTACGGCCGCCGTTCACCG+GGG 0.732311 7_2:+87554146 Msa1086770:CDS
GAACATACTACAGCTCCAGG+TGG 0.771466 7_2:+87553522 Msa1086770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGTTGAACAATCAAAATAGA+TGG + chr7_2:87553004-87553023 Msa1086770:CDS 25.0%
! AGTTGAACAATCAAAATAGA+TGG + chr7_2:87553004-87553023 Msa1086770:CDS 25.0%
CACCTATCGTTAATGAAAAA+CGG + chr7_2:87553128-87553147 Msa1086770:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG - chr7_2:87553169-87553188 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG - chr7_2:87553617-87553636 None:intergenic 30.0%
CACCTATCGTTAATGAAAAA+CGG + chr7_2:87553128-87553147 Msa1086770:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG - chr7_2:87553169-87553188 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG - chr7_2:87553617-87553636 None:intergenic 30.0%
!!! AGCCGTTTTTCATTAACGAT+AGG - chr7_2:87553133-87553152 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG - chr7_2:87553609-87553628 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG - chr7_2:87553618-87553637 None:intergenic 35.0%
AAAGTCGTAAGACCATGTAT+GGG - chr7_2:87554244-87554263 None:intergenic 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG - chr7_2:87553133-87553152 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG - chr7_2:87553609-87553628 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG - chr7_2:87553618-87553637 None:intergenic 35.0%
AAAGTCGTAAGACCATGTAT+GGG - chr7_2:87554244-87554263 None:intergenic 35.0%
ATTGCCTGATCGAATTGATC+AGG + chr7_2:87553029-87553048 Msa1086770:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG - chr7_2:87553036-87553055 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG + chr7_2:87553045-87553064 Msa1086770:intron 40.0%
AGAACAAGGTTCAAGTCTAC+CGG + chr7_2:87553059-87553078 Msa1086770:intron 40.0%
CATTAACGATAGGTGTCAAG+TGG - chr7_2:87553123-87553142 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG - chr7_2:87553163-87553182 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG + chr7_2:87553266-87553285 Msa1086770:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG - chr7_2:87553514-87553533 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG + chr7_2:87553623-87553642 Msa1086770:intron 40.0%
TCAGGTAGACAGTTTCTATG+GGG - chr7_2:87553811-87553830 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG - chr7_2:87553812-87553831 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG - chr7_2:87553813-87553832 None:intergenic 40.0%
TAGACATGTCTGTGAAGATG+CGG - chr7_2:87554025-87554044 None:intergenic 40.0%
AAGGTAGCGAAATTCCTTGT+CGG - chr7_2:87554114-87554133 None:intergenic 40.0%
ACAAGGAATTTCGCTACCTT+AGG + chr7_2:87554114-87554133 Msa1086770:CDS 40.0%
CCTTAGGACCGTTATAGTTA+CGG + chr7_2:87554130-87554149 Msa1086770:CDS 40.0%
AAGTCGTAAGACCATGTATG+GGG - chr7_2:87554243-87554262 None:intergenic 40.0%
CAAAGTCGTAAGACCATGTA+TGG - chr7_2:87554245-87554264 None:intergenic 40.0%
! TACATGGTCTTACGACTTTG+CGG + chr7_2:87554245-87554264 Msa1086770:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG + chr7_2:87553029-87553048 Msa1086770:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG - chr7_2:87553036-87553055 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG + chr7_2:87553045-87553064 Msa1086770:intron 40.0%
AGAACAAGGTTCAAGTCTAC+CGG + chr7_2:87553059-87553078 Msa1086770:intron 40.0%
CATTAACGATAGGTGTCAAG+TGG - chr7_2:87553123-87553142 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG - chr7_2:87553163-87553182 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG + chr7_2:87553266-87553285 Msa1086770:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG - chr7_2:87553514-87553533 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG + chr7_2:87553623-87553642 Msa1086770:intron 40.0%
TCAGGTAGACAGTTTCTATG+GGG - chr7_2:87553811-87553830 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG - chr7_2:87553812-87553831 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG - chr7_2:87553813-87553832 None:intergenic 40.0%
TAGACATGTCTGTGAAGATG+CGG - chr7_2:87554025-87554044 None:intergenic 40.0%
AAGGTAGCGAAATTCCTTGT+CGG - chr7_2:87554114-87554133 None:intergenic 40.0%
ACAAGGAATTTCGCTACCTT+AGG + chr7_2:87554114-87554133 Msa1086770:CDS 40.0%
CCTTAGGACCGTTATAGTTA+CGG + chr7_2:87554130-87554149 Msa1086770:CDS 40.0%
AAGTCGTAAGACCATGTATG+GGG - chr7_2:87554243-87554262 None:intergenic 40.0%
CAAAGTCGTAAGACCATGTA+TGG - chr7_2:87554245-87554264 None:intergenic 40.0%
! TACATGGTCTTACGACTTTG+CGG + chr7_2:87554245-87554264 Msa1086770:CDS 40.0%
TTCAAGTCTACCGGTCTGTT+AGG + chr7_2:87553068-87553087 Msa1086770:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG - chr7_2:87553097-87553116 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG + chr7_2:87553265-87553284 Msa1086770:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG + chr7_2:87553267-87553286 Msa1086770:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG + chr7_2:87553348-87553367 Msa1086770:intron 45.0%
ATTAAAGCGGTACGTGAGCT+GGG - chr7_2:87553481-87553500 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG + chr7_2:87553481-87553500 Msa1086770:CDS 45.0%
CTGTAGTATGTTCCAAGGGT+TGG - chr7_2:87553515-87553534 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG - chr7_2:87553519-87553538 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG - chr7_2:87553520-87553539 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG + chr7_2:87553519-87553538 Msa1086770:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG + chr7_2:87553864-87553883 Msa1086770:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG - chr7_2:87553974-87553993 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG - chr7_2:87553975-87553994 None:intergenic 45.0%
AGGGAACAGTGAAGCTTCAT+AGG + chr7_2:87553974-87553993 Msa1086770:intron 45.0%
GGGAACAGTGAAGCTTCATA+GGG + chr7_2:87553975-87553994 Msa1086770:intron 45.0%
TTCATAGGGTCTTTCTGTCC+AGG + chr7_2:87553989-87554008 Msa1086770:intron 45.0%
AGGTAGCGAAATTCCTTGTC+GGG - chr7_2:87554113-87554132 None:intergenic 45.0%
CCGTAACTATAACGGTCCTA+AGG - chr7_2:87554133-87554152 None:intergenic 45.0%
!! AAGTTGGTGACCTGATGACA+GGG - chr7_2:87554188-87554207 None:intergenic 45.0%
CACCAACTTCCTTAACCTTC+CGG + chr7_2:87554199-87554218 Msa1086770:CDS 45.0%
AGTCGTAAGACCATGTATGG+GGG - chr7_2:87554242-87554261 None:intergenic 45.0%
! TTTGCGGAGACCTGTGTTTT+TGG + chr7_2:87554261-87554280 Msa1086770:CDS 45.0%
TTCAAGTCTACCGGTCTGTT+AGG + chr7_2:87553068-87553087 Msa1086770:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG - chr7_2:87553097-87553116 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG + chr7_2:87553265-87553284 Msa1086770:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG + chr7_2:87553267-87553286 Msa1086770:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG + chr7_2:87553348-87553367 Msa1086770:intron 45.0%
ATTAAAGCGGTACGTGAGCT+GGG - chr7_2:87553481-87553500 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG + chr7_2:87553481-87553500 Msa1086770:CDS 45.0%
CTGTAGTATGTTCCAAGGGT+TGG - chr7_2:87553515-87553534 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG - chr7_2:87553519-87553538 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG - chr7_2:87553520-87553539 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG + chr7_2:87553519-87553538 Msa1086770:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG + chr7_2:87553864-87553883 Msa1086770:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG - chr7_2:87553974-87553993 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG - chr7_2:87553975-87553994 None:intergenic 45.0%
AGGGAACAGTGAAGCTTCAT+AGG + chr7_2:87553974-87553993 Msa1086770:intron 45.0%
GGGAACAGTGAAGCTTCATA+GGG + chr7_2:87553975-87553994 Msa1086770:intron 45.0%
TTCATAGGGTCTTTCTGTCC+AGG + chr7_2:87553989-87554008 Msa1086770:intron 45.0%
AGGTAGCGAAATTCCTTGTC+GGG - chr7_2:87554113-87554132 None:intergenic 45.0%
CCGTAACTATAACGGTCCTA+AGG - chr7_2:87554133-87554152 None:intergenic 45.0%
!! AAGTTGGTGACCTGATGACA+GGG - chr7_2:87554188-87554207 None:intergenic 45.0%
CACCAACTTCCTTAACCTTC+CGG + chr7_2:87554199-87554218 Msa1086770:CDS 45.0%
AGTCGTAAGACCATGTATGG+GGG - chr7_2:87554242-87554261 None:intergenic 45.0%
! TTTGCGGAGACCTGTGTTTT+TGG + chr7_2:87554261-87554280 Msa1086770:CDS 45.0%
CAGAGAACCCATCGCTGTTT+CGG + chr7_2:87553213-87553232 Msa1086770:CDS 50.0%
ATCACAGCCGAAACAGCGAT+GGG - chr7_2:87553223-87553242 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG - chr7_2:87553224-87553243 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG - chr7_2:87553355-87553374 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG - chr7_2:87553395-87553414 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG - chr7_2:87553445-87553464 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG - chr7_2:87553456-87553475 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG - chr7_2:87553482-87553501 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG + chr7_2:87553480-87553499 Msa1086770:CDS 50.0%
GAACATACTACAGCTCCAGG+TGG + chr7_2:87553522-87553541 Msa1086770:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG - chr7_2:87553555-87553574 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG - chr7_2:87553787-87553806 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG - chr7_2:87553805-87553824 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG - chr7_2:87553840-87553859 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG - chr7_2:87553881-87553900 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG + chr7_2:87553878-87553897 Msa1086770:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG - chr7_2:87553926-87553945 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG + chr7_2:87553954-87553973 Msa1086770:intron 50.0%
AAAGCCCAAAGCCAATCCCA+GGG + chr7_2:87553955-87553974 Msa1086770:intron 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG - chr7_2:87553962-87553981 None:intergenic 50.0%
! TAACGATCTGGGCACTGTCT+CGG - chr7_2:87554065-87554084 None:intergenic 50.0%
! CACGAAAGGCGTAACGATCT+GGG - chr7_2:87554076-87554095 None:intergenic 50.0%
AGATCGTTACGCCTTTCGTG+CGG + chr7_2:87554076-87554095 Msa1086770:CDS 50.0%
AACGGCGGCCGTAACTATAA+CGG - chr7_2:87554141-87554160 None:intergenic 50.0%
!! GAAGTTGGTGACCTGATGAC+AGG - chr7_2:87554189-87554208 None:intergenic 50.0%
TGCCGGAAGGTTAAGGAAGT+TGG - chr7_2:87554204-87554223 None:intergenic 50.0%
TTCCTTAACCTTCCGGCACT+GGG + chr7_2:87554206-87554225 Msa1086770:CDS 50.0%
CAGAGAACCCATCGCTGTTT+CGG + chr7_2:87553213-87553232 Msa1086770:CDS 50.0%
ATCACAGCCGAAACAGCGAT+GGG - chr7_2:87553223-87553242 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG - chr7_2:87553224-87553243 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG - chr7_2:87553355-87553374 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG - chr7_2:87553395-87553414 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG - chr7_2:87553445-87553464 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG - chr7_2:87553456-87553475 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG - chr7_2:87553482-87553501 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG + chr7_2:87553480-87553499 Msa1086770:CDS 50.0%
GAACATACTACAGCTCCAGG+TGG + chr7_2:87553522-87553541 Msa1086770:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG - chr7_2:87553555-87553574 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG - chr7_2:87553787-87553806 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG - chr7_2:87553805-87553824 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG - chr7_2:87553840-87553859 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG - chr7_2:87553881-87553900 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG + chr7_2:87553878-87553897 Msa1086770:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG - chr7_2:87553926-87553945 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG + chr7_2:87553954-87553973 Msa1086770:intron 50.0%
AAAGCCCAAAGCCAATCCCA+GGG + chr7_2:87553955-87553974 Msa1086770:intron 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG - chr7_2:87553962-87553981 None:intergenic 50.0%
! TAACGATCTGGGCACTGTCT+CGG - chr7_2:87554065-87554084 None:intergenic 50.0%
! CACGAAAGGCGTAACGATCT+GGG - chr7_2:87554076-87554095 None:intergenic 50.0%
AGATCGTTACGCCTTTCGTG+CGG + chr7_2:87554076-87554095 Msa1086770:CDS 50.0%
AACGGCGGCCGTAACTATAA+CGG - chr7_2:87554141-87554160 None:intergenic 50.0%
!! GAAGTTGGTGACCTGATGAC+AGG - chr7_2:87554189-87554208 None:intergenic 50.0%
TGCCGGAAGGTTAAGGAAGT+TGG - chr7_2:87554204-87554223 None:intergenic 50.0%
TTCCTTAACCTTCCGGCACT+GGG + chr7_2:87554206-87554225 Msa1086770:CDS 50.0%
! GCTGAGGCATCCTAACAGAC+CGG - chr7_2:87553081-87553100 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG + chr7_2:87553188-87553207 Msa1086770:intron 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG + chr7_2:87553189-87553208 Msa1086770:intron 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG + chr7_2:87553225-87553244 Msa1086770:CDS 55.0%
TGTTTCGGCTGTGATACCGG+AGG + chr7_2:87553228-87553247 Msa1086770:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG + chr7_2:87553271-87553290 Msa1086770:intron 55.0%
AAACGCTGGGTAGCCAAGTG+CGG - chr7_2:87553331-87553350 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG - chr7_2:87553344-87553363 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG - chr7_2:87553345-87553364 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG + chr7_2:87553359-87553378 Msa1086770:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG + chr7_2:87553389-87553408 Msa1086770:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG - chr7_2:87553394-87553413 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG + chr7_2:87553394-87553413 Msa1086770:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG - chr7_2:87553400-87553419 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG - chr7_2:87553421-87553440 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG + chr7_2:87553423-87553442 Msa1086770:CDS 55.0%
TCTAACGCCCACACCGGATA+TGG + chr7_2:87553429-87553448 Msa1086770:CDS 55.0%
GTTCGGTCCATATCCGGTGT+GGG - chr7_2:87553439-87553458 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG - chr7_2:87553440-87553459 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG - chr7_2:87553494-87553513 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG - chr7_2:87553569-87553588 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG - chr7_2:87553574-87553593 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG + chr7_2:87553573-87553592 Msa1086770:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG + chr7_2:87553574-87553593 Msa1086770:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG - chr7_2:87553579-87553598 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG - chr7_2:87553664-87553683 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG - chr7_2:87553725-87553744 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG + chr7_2:87553723-87553742 Msa1086770:CDS 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG - chr7_2:87553733-87553752 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG - chr7_2:87553756-87553775 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG - chr7_2:87553764-87553783 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG - chr7_2:87553765-87553784 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG - chr7_2:87553774-87553793 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG + chr7_2:87553775-87553794 Msa1086770:CDS 55.0%
! GCACGCCTCCGTTACCTTTT+GGG + chr7_2:87553776-87553795 Msa1086770:CDS 55.0%
GTCTACCTGAGACTGTCCCT+TGG + chr7_2:87553821-87553840 Msa1086770:CDS 55.0%
ACAGACCAAGGGACAGTCTC+AGG - chr7_2:87553829-87553848 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG + chr7_2:87553831-87553850 Msa1086770:CDS 55.0%
CCTTGTGCCAGTACAGACCA+AGG - chr7_2:87553841-87553860 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG + chr7_2:87553838-87553857 Msa1086770:CDS 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG - chr7_2:87553915-87553934 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG - chr7_2:87553939-87553958 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG - chr7_2:87553963-87553982 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG - chr7_2:87553969-87553988 None:intergenic 55.0%
! GCACGAAAGGCGTAACGATC+TGG - chr7_2:87554077-87554096 None:intergenic 55.0%
GATCGTTACGCCTTTCGTGC+GGG + chr7_2:87554077-87554096 Msa1086770:CDS 55.0%
TAAGTTCCGACCCGCACGAA+AGG - chr7_2:87554090-87554109 None:intergenic 55.0%
TGACCTGATGACAGGGAAGC+CGG - chr7_2:87554181-87554200 None:intergenic 55.0%
CTTCCTTAACCTTCCGGCAC+TGG + chr7_2:87554205-87554224 Msa1086770:CDS 55.0%
! GCTGAGGCATCCTAACAGAC+CGG - chr7_2:87553081-87553100 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG + chr7_2:87553188-87553207 Msa1086770:intron 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG + chr7_2:87553189-87553208 Msa1086770:intron 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG + chr7_2:87553225-87553244 Msa1086770:CDS 55.0%
TGTTTCGGCTGTGATACCGG+AGG + chr7_2:87553228-87553247 Msa1086770:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG + chr7_2:87553271-87553290 Msa1086770:intron 55.0%
AAACGCTGGGTAGCCAAGTG+CGG - chr7_2:87553331-87553350 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG - chr7_2:87553344-87553363 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG - chr7_2:87553345-87553364 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG + chr7_2:87553359-87553378 Msa1086770:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG + chr7_2:87553389-87553408 Msa1086770:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG - chr7_2:87553394-87553413 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG + chr7_2:87553394-87553413 Msa1086770:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG - chr7_2:87553400-87553419 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG - chr7_2:87553421-87553440 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG + chr7_2:87553423-87553442 Msa1086770:CDS 55.0%
TCTAACGCCCACACCGGATA+TGG + chr7_2:87553429-87553448 Msa1086770:CDS 55.0%
GTTCGGTCCATATCCGGTGT+GGG - chr7_2:87553439-87553458 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG - chr7_2:87553440-87553459 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG - chr7_2:87553494-87553513 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG - chr7_2:87553569-87553588 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG - chr7_2:87553574-87553593 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG + chr7_2:87553573-87553592 Msa1086770:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG + chr7_2:87553574-87553593 Msa1086770:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG - chr7_2:87553579-87553598 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG - chr7_2:87553664-87553683 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG - chr7_2:87553725-87553744 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG + chr7_2:87553723-87553742 Msa1086770:CDS 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG - chr7_2:87553733-87553752 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG - chr7_2:87553756-87553775 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG - chr7_2:87553764-87553783 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG - chr7_2:87553765-87553784 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG - chr7_2:87553774-87553793 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG + chr7_2:87553775-87553794 Msa1086770:CDS 55.0%
! GCACGCCTCCGTTACCTTTT+GGG + chr7_2:87553776-87553795 Msa1086770:CDS 55.0%
GTCTACCTGAGACTGTCCCT+TGG + chr7_2:87553821-87553840 Msa1086770:CDS 55.0%
ACAGACCAAGGGACAGTCTC+AGG - chr7_2:87553829-87553848 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG + chr7_2:87553831-87553850 Msa1086770:CDS 55.0%
CCTTGTGCCAGTACAGACCA+AGG - chr7_2:87553841-87553860 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG + chr7_2:87553838-87553857 Msa1086770:CDS 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG - chr7_2:87553915-87553934 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG - chr7_2:87553939-87553958 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG - chr7_2:87553963-87553982 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG - chr7_2:87553969-87553988 None:intergenic 55.0%
! GCACGAAAGGCGTAACGATC+TGG - chr7_2:87554077-87554096 None:intergenic 55.0%
GATCGTTACGCCTTTCGTGC+GGG + chr7_2:87554077-87554096 Msa1086770:CDS 55.0%
TAAGTTCCGACCCGCACGAA+AGG - chr7_2:87554090-87554109 None:intergenic 55.0%
TGACCTGATGACAGGGAAGC+CGG - chr7_2:87554181-87554200 None:intergenic 55.0%
CTTCCTTAACCTTCCGGCAC+TGG + chr7_2:87554205-87554224 Msa1086770:CDS 55.0%
! CTTTTGCTCCATCCCCGCAG+GGG + chr7_2:87553190-87553209 Msa1086770:intron 60.0%
GCTGTGATACCGGAGGCTCT+GGG + chr7_2:87553235-87553254 Msa1086770:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG + chr7_2:87553236-87553255 Msa1086770:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG + chr7_2:87553249-87553268 Msa1086770:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG + chr7_2:87553270-87553289 Msa1086770:intron 60.0%
GCAGTTATCCGCTCCGCACT+TGG + chr7_2:87553315-87553334 Msa1086770:intron 60.0%
GGCTACCCAGCGTTTACCGT+TGG + chr7_2:87553336-87553355 Msa1086770:intron 60.0%
CTAGTACGAGAGGACCGGGA+AGG - chr7_2:87553390-87553409 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG + chr7_2:87553388-87553407 Msa1086770:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG - chr7_2:87553578-87553597 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG + chr7_2:87553575-87553594 Msa1086770:CDS 60.0%
TCGGCACCGTCGGATCACTA+AGG + chr7_2:87553655-87553674 Msa1086770:intron 60.0%
CGTCGAGCAGGGACGAAAGT+CGG - chr7_2:87553681-87553700 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG + chr7_2:87553679-87553698 Msa1086770:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG + chr7_2:87553680-87553699 Msa1086770:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG + chr7_2:87553722-87553741 Msa1086770:CDS 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG - chr7_2:87553726-87553745 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG + chr7_2:87553779-87553798 Msa1086770:CDS 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG - chr7_2:87553784-87553803 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG - chr7_2:87553911-87553930 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG - chr7_2:87553912-87553931 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG - chr7_2:87553913-87553932 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG - chr7_2:87553914-87553933 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG - chr7_2:87553935-87553954 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG - chr7_2:87553942-87553961 None:intergenic 60.0%
GGGTCTTTCTGTCCAGGTGC+AGG + chr7_2:87553995-87554014 Msa1086770:intron 60.0%
! AGATGCGGACTACCTGCACC+TGG - chr7_2:87554010-87554029 None:intergenic 60.0%
CACTGTCTCGGAGAGAGGCT+CGG - chr7_2:87554053-87554072 None:intergenic 60.0%
GTTACGCCTTTCGTGCGGGT+CGG + chr7_2:87554081-87554100 Msa1086770:CDS 60.0%
GGGTCGGAACTTACCCGACA+AGG + chr7_2:87554097-87554116 Msa1086770:CDS 60.0%
TAGTTACGGCCGCCGTTCAC+CGG + chr7_2:87554144-87554163 Msa1086770:CDS 60.0%
! TGCCCAGTGCCGGAAGGTTA+AGG - chr7_2:87554211-87554230 None:intergenic 60.0%
! TTAACCTTCCGGCACTGGGC+AGG + chr7_2:87554210-87554229 Msa1086770:CDS 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG + chr7_2:87553190-87553209 Msa1086770:intron 60.0%
GCTGTGATACCGGAGGCTCT+GGG + chr7_2:87553235-87553254 Msa1086770:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG + chr7_2:87553236-87553255 Msa1086770:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG + chr7_2:87553249-87553268 Msa1086770:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG + chr7_2:87553270-87553289 Msa1086770:intron 60.0%
GCAGTTATCCGCTCCGCACT+TGG + chr7_2:87553315-87553334 Msa1086770:intron 60.0%
GGCTACCCAGCGTTTACCGT+TGG + chr7_2:87553336-87553355 Msa1086770:intron 60.0%
CTAGTACGAGAGGACCGGGA+AGG - chr7_2:87553390-87553409 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG + chr7_2:87553388-87553407 Msa1086770:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG - chr7_2:87553578-87553597 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG + chr7_2:87553575-87553594 Msa1086770:CDS 60.0%
TCGGCACCGTCGGATCACTA+AGG + chr7_2:87553655-87553674 Msa1086770:intron 60.0%
CGTCGAGCAGGGACGAAAGT+CGG - chr7_2:87553681-87553700 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG + chr7_2:87553679-87553698 Msa1086770:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG + chr7_2:87553680-87553699 Msa1086770:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG + chr7_2:87553722-87553741 Msa1086770:CDS 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG - chr7_2:87553726-87553745 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG + chr7_2:87553779-87553798 Msa1086770:CDS 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG - chr7_2:87553784-87553803 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG - chr7_2:87553911-87553930 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG - chr7_2:87553912-87553931 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG - chr7_2:87553913-87553932 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG - chr7_2:87553914-87553933 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG - chr7_2:87553935-87553954 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG - chr7_2:87553942-87553961 None:intergenic 60.0%
GGGTCTTTCTGTCCAGGTGC+AGG + chr7_2:87553995-87554014 Msa1086770:intron 60.0%
! AGATGCGGACTACCTGCACC+TGG - chr7_2:87554010-87554029 None:intergenic 60.0%
CACTGTCTCGGAGAGAGGCT+CGG - chr7_2:87554053-87554072 None:intergenic 60.0%
GTTACGCCTTTCGTGCGGGT+CGG + chr7_2:87554081-87554100 Msa1086770:CDS 60.0%
GGGTCGGAACTTACCCGACA+AGG + chr7_2:87554097-87554116 Msa1086770:CDS 60.0%
TAGTTACGGCCGCCGTTCAC+CGG + chr7_2:87554144-87554163 Msa1086770:CDS 60.0%
! TGCCCAGTGCCGGAAGGTTA+AGG - chr7_2:87554211-87554230 None:intergenic 60.0%
! TTAACCTTCCGGCACTGGGC+AGG + chr7_2:87554210-87554229 Msa1086770:CDS 60.0%
ATGGGTTCTCTGCCCCTGCG+GGG - chr7_2:87553205-87553224 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG - chr7_2:87553206-87553225 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG - chr7_2:87553207-87553226 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG + chr7_2:87553234-87553253 Msa1086770:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG + chr7_2:87553243-87553262 Msa1086770:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG - chr7_2:87553247-87553266 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG - chr7_2:87553326-87553345 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG + chr7_2:87553373-87553392 Msa1086770:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG + chr7_2:87553500-87553519 Msa1086770:CDS 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG - chr7_2:87553540-87553559 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG + chr7_2:87553541-87553560 Msa1086770:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG - chr7_2:87553635-87553654 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG + chr7_2:87553636-87553655 Msa1086770:intron 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG - chr7_2:87553649-87553668 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG - chr7_2:87553650-87553669 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG - chr7_2:87553654-87553673 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG + chr7_2:87553683-87553702 Msa1086770:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG + chr7_2:87553684-87553703 Msa1086770:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG - chr7_2:87553692-87553711 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG + chr7_2:87553738-87553757 Msa1086770:CDS 65.0%
TCCTCGGGCCAGACGGAGAT+TGG - chr7_2:87553749-87553768 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG - chr7_2:87553793-87553812 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG - chr7_2:87553910-87553929 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG + chr7_2:87553931-87553950 Msa1086770:intron 65.0%
! CTGGGCACTGTCTCGGAGAG+AGG - chr7_2:87554058-87554077 None:intergenic 65.0%
AGTTACGGCCGCCGTTCACC+GGG + chr7_2:87554145-87554164 Msa1086770:CDS 65.0%
!! TCGCCGGCTTCCCTGTCATC+AGG + chr7_2:87554175-87554194 Msa1086770:CDS 65.0%
CAGGCGTCAGCCCCCATACA+TGG + chr7_2:87554229-87554248 Msa1086770:CDS 65.0%
ATGGGTTCTCTGCCCCTGCG+GGG - chr7_2:87553205-87553224 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG - chr7_2:87553206-87553225 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG - chr7_2:87553207-87553226 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG + chr7_2:87553234-87553253 Msa1086770:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG + chr7_2:87553243-87553262 Msa1086770:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG - chr7_2:87553247-87553266 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG - chr7_2:87553326-87553345 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG + chr7_2:87553373-87553392 Msa1086770:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG + chr7_2:87553500-87553519 Msa1086770:CDS 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG - chr7_2:87553540-87553559 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG + chr7_2:87553541-87553560 Msa1086770:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG - chr7_2:87553635-87553654 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG + chr7_2:87553636-87553655 Msa1086770:intron 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG - chr7_2:87553649-87553668 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG - chr7_2:87553650-87553669 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG - chr7_2:87553654-87553673 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG + chr7_2:87553683-87553702 Msa1086770:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG + chr7_2:87553684-87553703 Msa1086770:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG - chr7_2:87553692-87553711 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG + chr7_2:87553738-87553757 Msa1086770:CDS 65.0%
TCCTCGGGCCAGACGGAGAT+TGG - chr7_2:87553749-87553768 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG - chr7_2:87553793-87553812 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG - chr7_2:87553910-87553929 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG + chr7_2:87553931-87553950 Msa1086770:intron 65.0%
! CTGGGCACTGTCTCGGAGAG+AGG - chr7_2:87554058-87554077 None:intergenic 65.0%
AGTTACGGCCGCCGTTCACC+GGG + chr7_2:87554145-87554164 Msa1086770:CDS 65.0%
!! TCGCCGGCTTCCCTGTCATC+AGG + chr7_2:87554175-87554194 Msa1086770:CDS 65.0%
CAGGCGTCAGCCCCCATACA+TGG + chr7_2:87554229-87554248 Msa1086770:CDS 65.0%
GTTCTCTGCCCCTGCGGGGA+TGG - chr7_2:87553201-87553220 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG - chr7_2:87553378-87553397 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG + chr7_2:87553645-87553664 Msa1086770:intron 70.0%
GCAAGACCCACCCGTCGAGC+AGG - chr7_2:87553693-87553712 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG + chr7_2:87553745-87553764 Msa1086770:CDS 70.0%
ACTGATGGCTCGAGCCCCCC+CGG + chr7_2:87553893-87553912 Msa1086770:intron 70.0%
GTTACGGCCGCCGTTCACCG+GGG + chr7_2:87554146-87554165 Msa1086770:CDS 70.0%
ACCGAAGCCCCGGTGAACGG+CGG - chr7_2:87554156-87554175 None:intergenic 70.0%
GCGACCGAAGCCCCGGTGAA+CGG - chr7_2:87554159-87554178 None:intergenic 70.0%
TTCACCGGGGCTTCGGTCGC+CGG + chr7_2:87554159-87554178 Msa1086770:CDS 70.0%
GTTCTCTGCCCCTGCGGGGA+TGG - chr7_2:87553201-87553220 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG - chr7_2:87553378-87553397 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG + chr7_2:87553645-87553664 Msa1086770:intron 70.0%
GCAAGACCCACCCGTCGAGC+AGG - chr7_2:87553693-87553712 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG + chr7_2:87553745-87553764 Msa1086770:CDS 70.0%
ACTGATGGCTCGAGCCCCCC+CGG + chr7_2:87553893-87553912 Msa1086770:intron 70.0%
GTTACGGCCGCCGTTCACCG+GGG + chr7_2:87554146-87554165 Msa1086770:CDS 70.0%
ACCGAAGCCCCGGTGAACGG+CGG - chr7_2:87554156-87554175 None:intergenic 70.0%
GCGACCGAAGCCCCGGTGAA+CGG - chr7_2:87554159-87554178 None:intergenic 70.0%
TTCACCGGGGCTTCGGTCGC+CGG + chr7_2:87554159-87554178 Msa1086770:CDS 70.0%
ATGGCTCGAGCCCCCCCGGA+AGG + chr7_2:87553897-87553916 Msa1086770:intron 75.0%
GCCGCCGTTCACCGGGGCTT+CGG + chr7_2:87554152-87554171 Msa1086770:CDS 75.0%
GAAGCCGGCGACCGAAGCCC+CGG - chr7_2:87554166-87554185 None:intergenic 75.0%
! GACGCCTGCCCAGTGCCGGA+AGG - chr7_2:87554217-87554236 None:intergenic 75.0%
GGCTGACGCCTGCCCAGTGC+CGG - chr7_2:87554221-87554240 None:intergenic 75.0%
ATGGCTCGAGCCCCCCCGGA+AGG + chr7_2:87553897-87553916 Msa1086770:intron 75.0%
GCCGCCGTTCACCGGGGCTT+CGG + chr7_2:87554152-87554171 Msa1086770:CDS 75.0%
GAAGCCGGCGACCGAAGCCC+CGG - chr7_2:87554166-87554185 None:intergenic 75.0%
! GACGCCTGCCCAGTGCCGGA+AGG - chr7_2:87554217-87554236 None:intergenic 75.0%
GGCTGACGCCTGCCCAGTGC+CGG - chr7_2:87554221-87554240 None:intergenic 75.0%
! GCTCGAGCCCCCCCGGAAGG+AGG + chr7_2:87553900-87553919 Msa1086770:intron 80.0%
! GCTCGAGCCCCCCCGGAAGG+AGG + chr7_2:87553900-87553919 Msa1086770:intron 80.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 87552967 87554286 87552967 ID=Msa1086770;Name=Msa1086770
chr7_2 mRNA 87552967 87554286 87552967 ID=Msa1086770-mRNA-1;Parent=Msa1086770;Name=Msa1086770-mRNA-1;_AED=0.46;_eAED=0.72;_QI=0|0|0|0.6|1|1|5|0|264
chr7_2 exon 87552967 87553050 87552967 ID=Msa1086770-mRNA-1:exon:23851;Parent=Msa1086770-mRNA-1
chr7_2 exon 87553210 87553288 87553210 ID=Msa1086770-mRNA-1:exon:23852;Parent=Msa1086770-mRNA-1
chr7_2 exon 87553410 87553620 87553410 ID=Msa1086770-mRNA-1:exon:23853;Parent=Msa1086770-mRNA-1
chr7_2 exon 87553715 87553859 87553715 ID=Msa1086770-mRNA-1:exon:23854;Parent=Msa1086770-mRNA-1
chr7_2 exon 87554011 87554286 87554011 ID=Msa1086770-mRNA-1:exon:23855;Parent=Msa1086770-mRNA-1
chr7_2 CDS 87552967 87553050 87552967 ID=Msa1086770-mRNA-1:cds;Parent=Msa1086770-mRNA-1
chr7_2 CDS 87553210 87553288 87553210 ID=Msa1086770-mRNA-1:cds;Parent=Msa1086770-mRNA-1
chr7_2 CDS 87553410 87553620 87553410 ID=Msa1086770-mRNA-1:cds;Parent=Msa1086770-mRNA-1
chr7_2 CDS 87553715 87553859 87553715 ID=Msa1086770-mRNA-1:cds;Parent=Msa1086770-mRNA-1
chr7_2 CDS 87554011 87554286 87554011 ID=Msa1086770-mRNA-1:cds;Parent=Msa1086770-mRNA-1
Gene Sequence

>Msa1086770

ATGGGGACAGAGGTTTTGGTTTTTCATGTTGTCAAAGAGTTGAACAATCAAAATAGATGGCGATTGCCTGATCGAATTGATCAGGGGCAGAGAACCCATCGCTGTTTCGGCTGTGATACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGATCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGTCTGTACTGGCACAAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGGTCACCAACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAA

Protein sequence

>Msa1086770

MGTEVLVFHVVKELNNQNRWRLPDRIDQGQRTHRCFGCDTGGSGEVGIGEHSSWGKGPLNALTPTPDMDRTVSRRSEPSSRTALMGEQPNPWNILQLQVAKSRHRGAKPSRRCELLGKISLLSLDQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLGLYWHKVQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLNLPALGRRQPPYMVLRLCGDLCFW*