AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1354780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1354780 MtrunA17_Chr4g0016151 100.000 82 0 0 199 280 1 82 7.40e-55 172
Msa1354780 MtrunA17_CPg0492351 100.000 82 0 0 199 280 1 82 7.40e-55 172
Msa1354780 MtrunA17_Chr7g0229411 98.780 82 1 0 199 280 1 82 3.39e-54 170
Msa1354780 MtrunA17_Chr4g0000631 98.780 82 1 0 199 280 1 82 3.50e-54 170
Msa1354780 MtrunA17_Chr5g0435911 97.561 82 2 0 199 280 1 82 1.38e-52 166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 122 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTTCATGGTTCGATATTC+TGG 0.185586 tig0014543:+507440 None:intergenic
TGCACGCCTCCGTTACCTTT+TGG 0.196515 tig0014543:-506499 Msa1354780:CDS
CAGCTCACGTACCGCTTTAA+TGG 0.245260 tig0014543:-506794 Msa1354780:CDS
TCATGCCTTTACTTCGTTCA+TGG 0.272664 tig0014543:+507427 None:intergenic
GGCTGTGATACCGGAGGCTC+TGG 0.279951 tig0014543:-507040 Msa1354780:CDS
TCTCAGGTAGACAGTTTCTA+TGG 0.287253 tig0014543:+506464 None:intergenic
GCACGAAAGGCGTAACGATC+TGG 0.311741 tig0014543:+506200 None:intergenic
TCTAACGCCCACACCGGATA+TGG 0.325084 tig0014543:-506845 Msa1354780:CDS
CAGAGAACCCATCGCTGTTT+CGG 0.333458 tig0014543:-507061 Msa1354780:CDS
TCCTCGGGCCAGACGGAGAT+TGG 0.349112 tig0014543:+506528 None:intergenic
TCCCGTCGATGTGAGCTCTT+GGG 0.355274 tig0014543:-506700 Msa1354780:CDS
CACCAACTTCCTTAACCTTC+CGG 0.362818 tig0014543:-506075 Msa1354780:CDS
TTCACCGGGGCTTCGGTCGC+CGG 0.371598 tig0014543:-506115 Msa1354780:CDS
CAAAGTCGTAAGACCATGTA+TGG 0.380055 tig0014543:+506032 None:intergenic
AAAGTTACTCTAGGGATAAC+AGG 0.383241 tig0014543:+506668 None:intergenic
CATTAAAGCGGTACGTGAGC+TGG 0.384796 tig0014543:+506795 None:intergenic
TTCCCGTCGATGTGAGCTCT+TGG 0.386490 tig0014543:-506701 Msa1354780:CDS
AGCTCACGTACCGCTTTAAT+GGG 0.395506 tig0014543:-506793 Msa1354780:CDS
GCCGCCGTTCACCGGGGCTT+CGG 0.397671 tig0014543:-506122 Msa1354780:CDS
CGCTGTTTCGGCTGTGATAC+CGG 0.403155 tig0014543:-507049 Msa1354780:CDS
AATAGGAGAGCACTCATCTT+GGG 0.408942 tig0014543:-507008 Msa1354780:CDS
TGCCCAGTGCCGGAAGGTTA+AGG 0.409134 tig0014543:+506066 None:intergenic
CCCTTCTGCCTTTGCACTCG+AGG 0.411231 tig0014543:-506552 Msa1354780:CDS
CTCACATCGACGGGAAGGTT+TGG 0.420533 tig0014543:+506708 None:intergenic
CTTCCTTAACCTTCCGGCAC+TGG 0.422146 tig0014543:-506069 Msa1354780:CDS
TGTAGTATGTTCCAAGGGTT+GGG 0.424624 tig0014543:+506763 None:intergenic
TAGTTACGGCCGCCGTTCAC+CGG 0.432611 tig0014543:-506130 Msa1354780:CDS
GGCTGACGCCTGCCCAGTGC+CGG 0.435469 tig0014543:+506056 None:intergenic
TTAACCTTCCGGCACTGGGC+AGG 0.436659 tig0014543:-506064 Msa1354780:CDS
AGTTACGGCCGCCGTTCACC+GGG 0.437053 tig0014543:-506129 Msa1354780:CDS
AGTTGAACAATCAAAATAGA+TGG 0.442588 tig0014543:-507270 Msa1354780:CDS
CCACCAAGTTCGGGATGGAT+TGG 0.447763 tig0014543:-507487 None:intergenic
CTGTAGTATGTTCCAAGGGT+TGG 0.452990 tig0014543:+506762 None:intergenic
TCGCCGGCTTCCCTGTCATC+AGG 0.453580 tig0014543:-506099 Msa1354780:CDS
GAGACAGTTCGGTCCATATC+CGG 0.455659 tig0014543:+506832 None:intergenic
ACAGACCAAGGGACAGTCTC+AGG 0.456050 tig0014543:+506448 None:intergenic
CAGAACGTCGTGAGACAGTT+CGG 0.457061 tig0014543:+506821 None:intergenic
GAAGCCGGCGACCGAAGCCC+CGG 0.461073 tig0014543:+506111 None:intergenic
CCTTCTGCCTTTGCACTCGA+GGG 0.461384 tig0014543:-506551 Msa1354780:CDS
GACTGTCCCTTGGTCTGTAC+TGG 0.464231 tig0014543:-506443 Msa1354780:CDS
CCCCAAGAGCTCACATCGAC+GGG 0.472021 tig0014543:+506699 None:intergenic
TACATGGTCTTACGACTTTG+CGG 0.476001 tig0014543:-506029 Msa1354780:CDS
GTTCGATATTCTGGTGTCCT+AGG 0.478291 tig0014543:+507449 None:intergenic
TCCGACTTCCCCAGAGCCTC+CGG 0.480691 tig0014543:+507030 None:intergenic
CTCGAGGGCCAATCTCCGTC+TGG 0.480699 tig0014543:-506536 Msa1354780:CDS
TGCCGGAAGGTTAAGGAAGT+TGG 0.485164 tig0014543:+506073 None:intergenic
GAATAGGAGAGCACTCATCT+TGG 0.487596 tig0014543:-507009 Msa1354780:CDS
ACAAGGAATTTCGCTACCTT+AGG 0.488888 tig0014543:-506160 Msa1354780:CDS
GGCTCTGGGGAAGTCGGAAT+AGG 0.491163 tig0014543:-507025 Msa1354780:CDS
CACGAAAGGCGTAACGATCT+GGG 0.491297 tig0014543:+506201 None:intergenic
GAAGTTGGTGACCTGATGAC+AGG 0.495416 tig0014543:+506088 None:intergenic
AGGTAGCGAAATTCCTTGTC+GGG 0.495901 tig0014543:+506164 None:intergenic
ATTGCCTGATCGAATTGATC+AGG 0.499380 tig0014543:-507245 Msa1354780:intron
TTCCTTAACCTTCCGGCACT+GGG 0.504342 tig0014543:-506068 Msa1354780:CDS
GCGACCGAAGCCCCGGTGAA+CGG 0.505900 tig0014543:+506118 None:intergenic
CACTGTCTCGGAGAGAGGCT+CGG 0.506062 tig0014543:+506224 None:intergenic
GATGTCGGCTCTTCGCCACC+TGG 0.508239 tig0014543:+506737 None:intergenic
GCTGTGATACCGGAGGCTCT+GGG 0.508804 tig0014543:-507039 Msa1354780:CDS
CTCAGGTAGACAGTTTCTAT+GGG 0.510655 tig0014543:+506465 None:intergenic
CCCTCGAGTGCAAAGGCAGA+AGG 0.511073 tig0014543:+506551 None:intergenic
AAGGTAGCGAAATTCCTTGT+CGG 0.511527 tig0014543:+506163 None:intergenic
TAACGATCTGGGCACTGTCT+CGG 0.513539 tig0014543:+506212 None:intergenic
ATGACCTGATCAATTCGATC+AGG 0.514268 tig0014543:+507241 None:intergenic
GATCGTTACGCCTTTCGTGC+GGG 0.516913 tig0014543:-506197 Msa1354780:CDS
TGACCTGATGACAGGGAAGC+CGG 0.518242 tig0014543:+506096 None:intergenic
CCTTAGGACCGTTATAGTTA+CGG 0.519214 tig0014543:-506144 Msa1354780:CDS
GAGGCGTGCAAAGGTTTCCT+CGG 0.526013 tig0014543:+506512 None:intergenic
AGGCGTGCAAAGGTTTCCTC+GGG 0.527025 tig0014543:+506513 None:intergenic
CCCGTCGATGTGAGCTCTTG+GGG 0.534121 tig0014543:-506699 Msa1354780:CDS
CCTTGGTCTGTACTGGCACA+AGG 0.538614 tig0014543:-506436 Msa1354780:intron
ATTAAAGCGGTACGTGAGCT+GGG 0.539036 tig0014543:+506796 None:intergenic
CTGGGCACTGTCTCGGAGAG+AGG 0.542198 tig0014543:+506219 None:intergenic
AAGGTTTGGCACCTCGATGT+CGG 0.545826 tig0014543:+506722 None:intergenic
TGGGCGAACAGCCCAACCCT+TGG 0.548090 tig0014543:-506774 Msa1354780:CDS
TCCCCAAGAGCTCACATCGA+CGG 0.555494 tig0014543:+506698 None:intergenic
AAAGTCGTAAGACCATGTAT+GGG 0.556989 tig0014543:+506033 None:intergenic
GCCAATCTCCGTCTGGCCCG+AGG 0.562208 tig0014543:-506529 Msa1354780:CDS
TGGAGCTGTAGTATGTTCCA+AGG 0.564153 tig0014543:+506757 None:intergenic
ACCGAAGCCCCGGTGAACGG+CGG 0.564471 tig0014543:+506121 None:intergenic
AGATCGTTACGCCTTTCGTG+CGG 0.565799 tig0014543:-506198 Msa1354780:CDS
ACCGGAGGCTCTGGGGAAGT+CGG 0.567230 tig0014543:-507031 Msa1354780:CDS
GACGCCTGCCCAGTGCCGGA+AGG 0.568365 tig0014543:+506060 None:intergenic
TATCACAGCCGAAACAGCGA+TGG 0.574058 tig0014543:+507053 None:intergenic
CCGTAACTATAACGGTCCTA+AGG 0.574485 tig0014543:+506144 None:intergenic
TTGGAACATACTACAGCTCC+AGG 0.579135 tig0014543:-506755 Msa1354780:CDS
TAAGTTCCGACCCGCACGAA+AGG 0.581321 tig0014543:+506187 None:intergenic
GTCTACCTGAGACTGTCCCT+TGG 0.586612 tig0014543:-506453 Msa1354780:CDS
AAGGTAACGGAGGCGTGCAA+AGG 0.595805 tig0014543:+506503 None:intergenic
CCTCGAGTGCAAAGGCAGAA+GGG 0.595841 tig0014543:+506552 None:intergenic
AAAGGTTTCCTCGGGCCAGA+CGG 0.597813 tig0014543:+506521 None:intergenic
CTGTGATACCGGAGGCTCTG+GGG 0.598997 tig0014543:-507038 Msa1354780:CDS
AACGGCGGCCGTAACTATAA+CGG 0.599287 tig0014543:+506136 None:intergenic
GTTACGCCTTTCGTGCGGGT+CGG 0.605304 tig0014543:-506193 Msa1354780:CDS
GGTGTGGTTCCTCTACGCCT+AGG 0.606362 tig0014543:-507466 Msa1354780:CDS
TGGGGCGTAGGCCTCCCAAA+AGG 0.606913 tig0014543:+506484 None:intergenic
GTTCGGTCCATATCCGGTGT+GGG 0.608178 tig0014543:+506838 None:intergenic
AAGAGCTCACATCGACGGGA+AGG 0.613365 tig0014543:+506703 None:intergenic
AGTTCGGTCCATATCCGGTG+TGG 0.618273 tig0014543:+506837 None:intergenic
GGGCTGTTCGCCCATTAAAG+CGG 0.619701 tig0014543:+506783 None:intergenic
ATCACAGCCGAAACAGCGAT+GGG 0.621115 tig0014543:+507054 None:intergenic
AAGTCGTAAGACCATGTATG+GGG 0.621859 tig0014543:+506034 None:intergenic
TTCTGGTGTCCTAGGCGTAG+AGG 0.622900 tig0014543:+507457 None:intergenic
AGACAGTTTCTATGGGGCGT+AGG 0.622986 tig0014543:+506472 None:intergenic
ATAGGAGAGCACTCATCTTG+GGG 0.623240 tig0014543:-507007 Msa1354780:intron
AAGTTGGTGACCTGATGACA+GGG 0.627282 tig0014543:+506089 None:intergenic
GTAGGCCTCCCAAAAGGTAA+CGG 0.632223 tig0014543:+506490 None:intergenic
AAGTTCGGGATGGATTGGTG+TGG 0.636372 tig0014543:-507482 None:intergenic
GGAGCTGTAGTATGTTCCAA+GGG 0.640199 tig0014543:+506758 None:intergenic
TAGACATGTCTGTGAAGATG+CGG 0.645281 tig0014543:+506252 None:intergenic
CCTTGTGCCAGTACAGACCA+AGG 0.645647 tig0014543:+506436 None:intergenic
GGGTCGGAACTTACCCGACA+AGG 0.655880 tig0014543:-506177 Msa1354780:CDS
CAATGCTCTAACGCCCACAC+CGG 0.666176 tig0014543:-506851 Msa1354780:CDS
AGATTGGCCCTCGAGTGCAA+AGG 0.670375 tig0014543:+506544 None:intergenic
GGCCTCCCAAAAGGTAACGG+AGG 0.683463 tig0014543:+506493 None:intergenic
AGTCGTAAGACCATGTATGG+GGG 0.686647 tig0014543:+506035 None:intergenic
CTTGTGCCAGTACAGACCAA+GGG 0.693537 tig0014543:+506437 None:intergenic
GTGGGCGTTAGAGCATTGAG+AGG 0.697492 tig0014543:+506856 None:intergenic
GTGGCGAAGAGCCGACATCG+AGG 0.704477 tig0014543:-506733 Msa1354780:CDS
TGTTTCGGCTGTGATACCGG+AGG 0.717886 tig0014543:-507046 Msa1354780:CDS
TCAGGTAGACAGTTTCTATG+GGG 0.720720 tig0014543:+506466 None:intergenic
GTTACGGCCGCCGTTCACCG+GGG 0.732311 tig0014543:-506128 Msa1354780:CDS
GAACATACTACAGCTCCAGG+TGG 0.771466 tig0014543:-506752 Msa1354780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGTTGAACAATCAAAATAGA+TGG - tig0014543:506213-506232 Msa1354780:CDS 25.0%
! AGTTGAACAATCAAAATAGA+TGG - tig0014543:506213-506232 Msa1354780:CDS 25.0%
CACCTATCGTTAATGAAAAA+CGG - tig0014543:506337-506356 Msa1354780:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + tig0014543:506378-506397 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG + tig0014543:506826-506845 None:intergenic 30.0%
CACCTATCGTTAATGAAAAA+CGG - tig0014543:506337-506356 Msa1354780:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + tig0014543:506378-506397 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG + tig0014543:506826-506845 None:intergenic 30.0%
! CATATTGACTAGTCAATGTC+AGG - tig0014543:506087-506106 Msa1354780:CDS 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + tig0014543:506342-506361 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG + tig0014543:506818-506837 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG + tig0014543:506827-506846 None:intergenic 35.0%
AAAGTCGTAAGACCATGTAT+GGG + tig0014543:507453-507472 None:intergenic 35.0%
! CATATTGACTAGTCAATGTC+AGG - tig0014543:506087-506106 Msa1354780:CDS 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + tig0014543:506342-506361 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG + tig0014543:506818-506837 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG + tig0014543:506827-506846 None:intergenic 35.0%
AAAGTCGTAAGACCATGTAT+GGG + tig0014543:507453-507472 None:intergenic 35.0%
TCGTTCATGGTTCGATATTC+TGG + tig0014543:506046-506065 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - tig0014543:506051-506070 Msa1354780:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + tig0014543:506059-506078 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + tig0014543:506151-506170 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - tig0014543:506151-506170 Msa1354780:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - tig0014543:506238-506257 Msa1354780:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG + tig0014543:506245-506264 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - tig0014543:506254-506273 Msa1354780:CDS 40.0%
AGAACAAGGTTCAAGTCTAC+CGG - tig0014543:506268-506287 Msa1354780:intron 40.0%
CATTAACGATAGGTGTCAAG+TGG + tig0014543:506332-506351 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + tig0014543:506372-506391 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG - tig0014543:506475-506494 Msa1354780:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + tig0014543:506723-506742 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - tig0014543:506832-506851 Msa1354780:CDS 40.0%
TCAGGTAGACAGTTTCTATG+GGG + tig0014543:507020-507039 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + tig0014543:507021-507040 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + tig0014543:507022-507041 None:intergenic 40.0%
TAGACATGTCTGTGAAGATG+CGG + tig0014543:507234-507253 None:intergenic 40.0%
AAGGTAGCGAAATTCCTTGT+CGG + tig0014543:507323-507342 None:intergenic 40.0%
ACAAGGAATTTCGCTACCTT+AGG - tig0014543:507323-507342 Msa1354780:intron 40.0%
CCTTAGGACCGTTATAGTTA+CGG - tig0014543:507339-507358 Msa1354780:intron 40.0%
AAGTCGTAAGACCATGTATG+GGG + tig0014543:507452-507471 None:intergenic 40.0%
CAAAGTCGTAAGACCATGTA+TGG + tig0014543:507454-507473 None:intergenic 40.0%
! TACATGGTCTTACGACTTTG+CGG - tig0014543:507454-507473 Msa1354780:CDS 40.0%
TCGTTCATGGTTCGATATTC+TGG + tig0014543:506046-506065 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - tig0014543:506051-506070 Msa1354780:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + tig0014543:506059-506078 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + tig0014543:506151-506170 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - tig0014543:506151-506170 Msa1354780:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - tig0014543:506238-506257 Msa1354780:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG + tig0014543:506245-506264 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - tig0014543:506254-506273 Msa1354780:CDS 40.0%
AGAACAAGGTTCAAGTCTAC+CGG - tig0014543:506268-506287 Msa1354780:intron 40.0%
CATTAACGATAGGTGTCAAG+TGG + tig0014543:506332-506351 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + tig0014543:506372-506391 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG - tig0014543:506475-506494 Msa1354780:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + tig0014543:506723-506742 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - tig0014543:506832-506851 Msa1354780:CDS 40.0%
TCAGGTAGACAGTTTCTATG+GGG + tig0014543:507020-507039 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + tig0014543:507021-507040 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + tig0014543:507022-507041 None:intergenic 40.0%
TAGACATGTCTGTGAAGATG+CGG + tig0014543:507234-507253 None:intergenic 40.0%
AAGGTAGCGAAATTCCTTGT+CGG + tig0014543:507323-507342 None:intergenic 40.0%
ACAAGGAATTTCGCTACCTT+AGG - tig0014543:507323-507342 Msa1354780:intron 40.0%
CCTTAGGACCGTTATAGTTA+CGG - tig0014543:507339-507358 Msa1354780:intron 40.0%
AAGTCGTAAGACCATGTATG+GGG + tig0014543:507452-507471 None:intergenic 40.0%
CAAAGTCGTAAGACCATGTA+TGG + tig0014543:507454-507473 None:intergenic 40.0%
! TACATGGTCTTACGACTTTG+CGG - tig0014543:507454-507473 Msa1354780:CDS 40.0%
GTTCGATATTCTGGTGTCCT+AGG + tig0014543:506037-506056 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - tig0014543:506104-506123 Msa1354780:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - tig0014543:506109-506128 Msa1354780:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + tig0014543:506114-506133 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + tig0014543:506152-506171 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - tig0014543:506150-506169 Msa1354780:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + tig0014543:506156-506175 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - tig0014543:506155-506174 Msa1354780:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - tig0014543:506156-506175 Msa1354780:CDS 45.0%
TTCAAGTCTACCGGTCTGTT+AGG - tig0014543:506277-506296 Msa1354780:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG + tig0014543:506306-506325 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG - tig0014543:506474-506493 Msa1354780:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG - tig0014543:506476-506495 Msa1354780:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - tig0014543:506557-506576 Msa1354780:CDS 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + tig0014543:506690-506709 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - tig0014543:506690-506709 Msa1354780:CDS 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + tig0014543:506724-506743 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + tig0014543:506728-506747 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + tig0014543:506729-506748 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - tig0014543:506728-506747 Msa1354780:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - tig0014543:507073-507092 Msa1354780:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG + tig0014543:507183-507202 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG + tig0014543:507184-507203 None:intergenic 45.0%
AGGGAACAGTGAAGCTTCAT+AGG - tig0014543:507183-507202 Msa1354780:intron 45.0%
GGGAACAGTGAAGCTTCATA+GGG - tig0014543:507184-507203 Msa1354780:intron 45.0%
TTCATAGGGTCTTTCTGTCC+AGG - tig0014543:507198-507217 Msa1354780:intron 45.0%
AGGTAGCGAAATTCCTTGTC+GGG + tig0014543:507322-507341 None:intergenic 45.0%
CCGTAACTATAACGGTCCTA+AGG + tig0014543:507342-507361 None:intergenic 45.0%
!! AAGTTGGTGACCTGATGACA+GGG + tig0014543:507397-507416 None:intergenic 45.0%
CACCAACTTCCTTAACCTTC+CGG - tig0014543:507408-507427 Msa1354780:intron 45.0%
AGTCGTAAGACCATGTATGG+GGG + tig0014543:507451-507470 None:intergenic 45.0%
! TTTGCGGAGACCTGTGTTTT+TGG - tig0014543:507470-507489 Msa1354780:CDS 45.0%
GTTCGATATTCTGGTGTCCT+AGG + tig0014543:506037-506056 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - tig0014543:506104-506123 Msa1354780:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - tig0014543:506109-506128 Msa1354780:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + tig0014543:506114-506133 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + tig0014543:506152-506171 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - tig0014543:506150-506169 Msa1354780:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + tig0014543:506156-506175 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - tig0014543:506155-506174 Msa1354780:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - tig0014543:506156-506175 Msa1354780:CDS 45.0%
TTCAAGTCTACCGGTCTGTT+AGG - tig0014543:506277-506296 Msa1354780:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG + tig0014543:506306-506325 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG - tig0014543:506474-506493 Msa1354780:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG - tig0014543:506476-506495 Msa1354780:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - tig0014543:506557-506576 Msa1354780:CDS 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + tig0014543:506690-506709 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - tig0014543:506690-506709 Msa1354780:CDS 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + tig0014543:506724-506743 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + tig0014543:506728-506747 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + tig0014543:506729-506748 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - tig0014543:506728-506747 Msa1354780:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - tig0014543:507073-507092 Msa1354780:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG + tig0014543:507183-507202 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG + tig0014543:507184-507203 None:intergenic 45.0%
AGGGAACAGTGAAGCTTCAT+AGG - tig0014543:507183-507202 Msa1354780:intron 45.0%
GGGAACAGTGAAGCTTCATA+GGG - tig0014543:507184-507203 Msa1354780:intron 45.0%
TTCATAGGGTCTTTCTGTCC+AGG - tig0014543:507198-507217 Msa1354780:intron 45.0%
AGGTAGCGAAATTCCTTGTC+GGG + tig0014543:507322-507341 None:intergenic 45.0%
CCGTAACTATAACGGTCCTA+AGG + tig0014543:507342-507361 None:intergenic 45.0%
!! AAGTTGGTGACCTGATGACA+GGG + tig0014543:507397-507416 None:intergenic 45.0%
CACCAACTTCCTTAACCTTC+CGG - tig0014543:507408-507427 Msa1354780:intron 45.0%
AGTCGTAAGACCATGTATGG+GGG + tig0014543:507451-507470 None:intergenic 45.0%
! TTTGCGGAGACCTGTGTTTT+TGG - tig0014543:507470-507489 Msa1354780:CDS 45.0%
TTGACTGGAGAGGACACCAA+AGG - tig0014543:506119-506138 Msa1354780:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + tig0014543:506160-506179 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - tig0014543:506157-506176 Msa1354780:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - tig0014543:506158-506177 Msa1354780:CDS 50.0%
CAGAGAACCCATCGCTGTTT+CGG - tig0014543:506422-506441 Msa1354780:intron 50.0%
ATCACAGCCGAAACAGCGAT+GGG + tig0014543:506432-506451 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG + tig0014543:506433-506452 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + tig0014543:506564-506583 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + tig0014543:506604-506623 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + tig0014543:506654-506673 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + tig0014543:506665-506684 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + tig0014543:506691-506710 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - tig0014543:506689-506708 Msa1354780:CDS 50.0%
GAACATACTACAGCTCCAGG+TGG - tig0014543:506731-506750 Msa1354780:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG + tig0014543:506764-506783 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + tig0014543:506996-507015 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + tig0014543:507014-507033 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + tig0014543:507049-507068 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + tig0014543:507090-507109 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - tig0014543:507087-507106 Msa1354780:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG + tig0014543:507135-507154 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG - tig0014543:507163-507182 Msa1354780:intron 50.0%
AAAGCCCAAAGCCAATCCCA+GGG - tig0014543:507164-507183 Msa1354780:intron 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG + tig0014543:507171-507190 None:intergenic 50.0%
! TAACGATCTGGGCACTGTCT+CGG + tig0014543:507274-507293 None:intergenic 50.0%
! CACGAAAGGCGTAACGATCT+GGG + tig0014543:507285-507304 None:intergenic 50.0%
AGATCGTTACGCCTTTCGTG+CGG - tig0014543:507285-507304 Msa1354780:CDS 50.0%
AACGGCGGCCGTAACTATAA+CGG + tig0014543:507350-507369 None:intergenic 50.0%
!! GAAGTTGGTGACCTGATGAC+AGG + tig0014543:507398-507417 None:intergenic 50.0%
TGCCGGAAGGTTAAGGAAGT+TGG + tig0014543:507413-507432 None:intergenic 50.0%
TTCCTTAACCTTCCGGCACT+GGG - tig0014543:507415-507434 Msa1354780:intron 50.0%
TTGACTGGAGAGGACACCAA+AGG - tig0014543:506119-506138 Msa1354780:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + tig0014543:506160-506179 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - tig0014543:506157-506176 Msa1354780:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - tig0014543:506158-506177 Msa1354780:CDS 50.0%
CAGAGAACCCATCGCTGTTT+CGG - tig0014543:506422-506441 Msa1354780:intron 50.0%
ATCACAGCCGAAACAGCGAT+GGG + tig0014543:506432-506451 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG + tig0014543:506433-506452 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + tig0014543:506564-506583 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + tig0014543:506604-506623 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + tig0014543:506654-506673 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + tig0014543:506665-506684 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + tig0014543:506691-506710 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - tig0014543:506689-506708 Msa1354780:CDS 50.0%
GAACATACTACAGCTCCAGG+TGG - tig0014543:506731-506750 Msa1354780:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG + tig0014543:506764-506783 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + tig0014543:506996-507015 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + tig0014543:507014-507033 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + tig0014543:507049-507068 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + tig0014543:507090-507109 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - tig0014543:507087-507106 Msa1354780:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG + tig0014543:507135-507154 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG - tig0014543:507163-507182 Msa1354780:intron 50.0%
AAAGCCCAAAGCCAATCCCA+GGG - tig0014543:507164-507183 Msa1354780:intron 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG + tig0014543:507171-507190 None:intergenic 50.0%
! TAACGATCTGGGCACTGTCT+CGG + tig0014543:507274-507293 None:intergenic 50.0%
! CACGAAAGGCGTAACGATCT+GGG + tig0014543:507285-507304 None:intergenic 50.0%
AGATCGTTACGCCTTTCGTG+CGG - tig0014543:507285-507304 Msa1354780:CDS 50.0%
AACGGCGGCCGTAACTATAA+CGG + tig0014543:507350-507369 None:intergenic 50.0%
!! GAAGTTGGTGACCTGATGAC+AGG + tig0014543:507398-507417 None:intergenic 50.0%
TGCCGGAAGGTTAAGGAAGT+TGG + tig0014543:507413-507432 None:intergenic 50.0%
TTCCTTAACCTTCCGGCACT+GGG - tig0014543:507415-507434 Msa1354780:intron 50.0%
TTCTGGTGTCCTAGGCGTAG+AGG + tig0014543:506029-506048 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG + tig0014543:506161-506180 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - tig0014543:506165-506184 Msa1354780:CDS 55.0%
! GCTGAGGCATCCTAACAGAC+CGG + tig0014543:506290-506309 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG - tig0014543:506397-506416 Msa1354780:intron 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG - tig0014543:506398-506417 Msa1354780:intron 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG - tig0014543:506434-506453 Msa1354780:intron 55.0%
TGTTTCGGCTGTGATACCGG+AGG - tig0014543:506437-506456 Msa1354780:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - tig0014543:506480-506499 Msa1354780:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + tig0014543:506540-506559 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + tig0014543:506553-506572 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + tig0014543:506554-506573 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - tig0014543:506568-506587 Msa1354780:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - tig0014543:506598-506617 Msa1354780:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + tig0014543:506603-506622 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - tig0014543:506603-506622 Msa1354780:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + tig0014543:506609-506628 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + tig0014543:506630-506649 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - tig0014543:506632-506651 Msa1354780:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - tig0014543:506638-506657 Msa1354780:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + tig0014543:506648-506667 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + tig0014543:506649-506668 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + tig0014543:506703-506722 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + tig0014543:506778-506797 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + tig0014543:506783-506802 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - tig0014543:506782-506801 Msa1354780:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - tig0014543:506783-506802 Msa1354780:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG + tig0014543:506788-506807 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + tig0014543:506873-506892 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + tig0014543:506934-506953 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - tig0014543:506932-506951 Msa1354780:intron 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + tig0014543:506942-506961 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + tig0014543:506965-506984 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + tig0014543:506973-506992 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + tig0014543:506974-506993 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + tig0014543:506983-507002 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - tig0014543:506984-507003 Msa1354780:intron 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - tig0014543:506985-507004 Msa1354780:intron 55.0%
GTCTACCTGAGACTGTCCCT+TGG - tig0014543:507030-507049 Msa1354780:CDS 55.0%
ACAGACCAAGGGACAGTCTC+AGG + tig0014543:507038-507057 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - tig0014543:507040-507059 Msa1354780:CDS 55.0%
CCTTGTGCCAGTACAGACCA+AGG + tig0014543:507050-507069 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - tig0014543:507047-507066 Msa1354780:CDS 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + tig0014543:507124-507143 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG + tig0014543:507148-507167 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG + tig0014543:507172-507191 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG + tig0014543:507178-507197 None:intergenic 55.0%
! GCACGAAAGGCGTAACGATC+TGG + tig0014543:507286-507305 None:intergenic 55.0%
GATCGTTACGCCTTTCGTGC+GGG - tig0014543:507286-507305 Msa1354780:CDS 55.0%
TAAGTTCCGACCCGCACGAA+AGG + tig0014543:507299-507318 None:intergenic 55.0%
TGACCTGATGACAGGGAAGC+CGG + tig0014543:507390-507409 None:intergenic 55.0%
CTTCCTTAACCTTCCGGCAC+TGG - tig0014543:507414-507433 Msa1354780:intron 55.0%
TTCTGGTGTCCTAGGCGTAG+AGG + tig0014543:506029-506048 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG + tig0014543:506161-506180 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - tig0014543:506165-506184 Msa1354780:CDS 55.0%
! GCTGAGGCATCCTAACAGAC+CGG + tig0014543:506290-506309 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG - tig0014543:506397-506416 Msa1354780:intron 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG - tig0014543:506398-506417 Msa1354780:intron 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG - tig0014543:506434-506453 Msa1354780:intron 55.0%
TGTTTCGGCTGTGATACCGG+AGG - tig0014543:506437-506456 Msa1354780:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - tig0014543:506480-506499 Msa1354780:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + tig0014543:506540-506559 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + tig0014543:506553-506572 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + tig0014543:506554-506573 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - tig0014543:506568-506587 Msa1354780:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - tig0014543:506598-506617 Msa1354780:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + tig0014543:506603-506622 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - tig0014543:506603-506622 Msa1354780:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + tig0014543:506609-506628 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + tig0014543:506630-506649 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - tig0014543:506632-506651 Msa1354780:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - tig0014543:506638-506657 Msa1354780:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + tig0014543:506648-506667 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + tig0014543:506649-506668 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + tig0014543:506703-506722 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + tig0014543:506778-506797 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + tig0014543:506783-506802 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - tig0014543:506782-506801 Msa1354780:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - tig0014543:506783-506802 Msa1354780:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG + tig0014543:506788-506807 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + tig0014543:506873-506892 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + tig0014543:506934-506953 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - tig0014543:506932-506951 Msa1354780:intron 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + tig0014543:506942-506961 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + tig0014543:506965-506984 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + tig0014543:506973-506992 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + tig0014543:506974-506993 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + tig0014543:506983-507002 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - tig0014543:506984-507003 Msa1354780:intron 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - tig0014543:506985-507004 Msa1354780:intron 55.0%
GTCTACCTGAGACTGTCCCT+TGG - tig0014543:507030-507049 Msa1354780:CDS 55.0%
ACAGACCAAGGGACAGTCTC+AGG + tig0014543:507038-507057 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - tig0014543:507040-507059 Msa1354780:CDS 55.0%
CCTTGTGCCAGTACAGACCA+AGG + tig0014543:507050-507069 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - tig0014543:507047-507066 Msa1354780:CDS 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + tig0014543:507124-507143 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG + tig0014543:507148-507167 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG + tig0014543:507172-507191 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG + tig0014543:507178-507197 None:intergenic 55.0%
! GCACGAAAGGCGTAACGATC+TGG + tig0014543:507286-507305 None:intergenic 55.0%
GATCGTTACGCCTTTCGTGC+GGG - tig0014543:507286-507305 Msa1354780:CDS 55.0%
TAAGTTCCGACCCGCACGAA+AGG + tig0014543:507299-507318 None:intergenic 55.0%
TGACCTGATGACAGGGAAGC+CGG + tig0014543:507390-507409 None:intergenic 55.0%
CTTCCTTAACCTTCCGGCAC+TGG - tig0014543:507414-507433 Msa1354780:intron 55.0%
GGTGTGGTTCCTCTACGCCT+AGG - tig0014543:506017-506036 Msa1354780:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG + tig0014543:506138-506157 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + tig0014543:506145-506164 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - tig0014543:506171-506190 Msa1354780:CDS 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG - tig0014543:506399-506418 Msa1354780:intron 60.0%
GCTGTGATACCGGAGGCTCT+GGG - tig0014543:506444-506463 Msa1354780:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - tig0014543:506445-506464 Msa1354780:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG - tig0014543:506458-506477 Msa1354780:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - tig0014543:506479-506498 Msa1354780:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - tig0014543:506524-506543 Msa1354780:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - tig0014543:506545-506564 Msa1354780:CDS 60.0%
CTAGTACGAGAGGACCGGGA+AGG + tig0014543:506599-506618 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - tig0014543:506597-506616 Msa1354780:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + tig0014543:506787-506806 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - tig0014543:506784-506803 Msa1354780:CDS 60.0%
TCGGCACCGTCGGATCACTA+AGG - tig0014543:506864-506883 Msa1354780:CDS 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + tig0014543:506890-506909 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - tig0014543:506888-506907 Msa1354780:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - tig0014543:506889-506908 Msa1354780:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - tig0014543:506931-506950 Msa1354780:intron 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + tig0014543:506935-506954 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - tig0014543:506988-507007 Msa1354780:intron 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + tig0014543:506993-507012 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + tig0014543:507120-507139 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + tig0014543:507121-507140 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + tig0014543:507122-507141 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + tig0014543:507123-507142 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG + tig0014543:507144-507163 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG + tig0014543:507151-507170 None:intergenic 60.0%
GGGTCTTTCTGTCCAGGTGC+AGG - tig0014543:507204-507223 Msa1354780:intron 60.0%
! AGATGCGGACTACCTGCACC+TGG + tig0014543:507219-507238 None:intergenic 60.0%
CACTGTCTCGGAGAGAGGCT+CGG + tig0014543:507262-507281 None:intergenic 60.0%
GTTACGCCTTTCGTGCGGGT+CGG - tig0014543:507290-507309 Msa1354780:CDS 60.0%
GGGTCGGAACTTACCCGACA+AGG - tig0014543:507306-507325 Msa1354780:intron 60.0%
TAGTTACGGCCGCCGTTCAC+CGG - tig0014543:507353-507372 Msa1354780:intron 60.0%
! TGCCCAGTGCCGGAAGGTTA+AGG + tig0014543:507420-507439 None:intergenic 60.0%
! TTAACCTTCCGGCACTGGGC+AGG - tig0014543:507419-507438 Msa1354780:intron 60.0%
GGTGTGGTTCCTCTACGCCT+AGG - tig0014543:506017-506036 Msa1354780:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG + tig0014543:506138-506157 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + tig0014543:506145-506164 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - tig0014543:506171-506190 Msa1354780:CDS 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG - tig0014543:506399-506418 Msa1354780:intron 60.0%
GCTGTGATACCGGAGGCTCT+GGG - tig0014543:506444-506463 Msa1354780:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - tig0014543:506445-506464 Msa1354780:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG - tig0014543:506458-506477 Msa1354780:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - tig0014543:506479-506498 Msa1354780:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - tig0014543:506524-506543 Msa1354780:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - tig0014543:506545-506564 Msa1354780:CDS 60.0%
CTAGTACGAGAGGACCGGGA+AGG + tig0014543:506599-506618 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - tig0014543:506597-506616 Msa1354780:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + tig0014543:506787-506806 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - tig0014543:506784-506803 Msa1354780:CDS 60.0%
TCGGCACCGTCGGATCACTA+AGG - tig0014543:506864-506883 Msa1354780:CDS 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + tig0014543:506890-506909 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - tig0014543:506888-506907 Msa1354780:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - tig0014543:506889-506908 Msa1354780:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - tig0014543:506931-506950 Msa1354780:intron 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + tig0014543:506935-506954 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - tig0014543:506988-507007 Msa1354780:intron 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + tig0014543:506993-507012 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + tig0014543:507120-507139 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + tig0014543:507121-507140 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + tig0014543:507122-507141 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + tig0014543:507123-507142 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG + tig0014543:507144-507163 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG + tig0014543:507151-507170 None:intergenic 60.0%
GGGTCTTTCTGTCCAGGTGC+AGG - tig0014543:507204-507223 Msa1354780:intron 60.0%
! AGATGCGGACTACCTGCACC+TGG + tig0014543:507219-507238 None:intergenic 60.0%
CACTGTCTCGGAGAGAGGCT+CGG + tig0014543:507262-507281 None:intergenic 60.0%
GTTACGCCTTTCGTGCGGGT+CGG - tig0014543:507290-507309 Msa1354780:CDS 60.0%
GGGTCGGAACTTACCCGACA+AGG - tig0014543:507306-507325 Msa1354780:intron 60.0%
TAGTTACGGCCGCCGTTCAC+CGG - tig0014543:507353-507372 Msa1354780:intron 60.0%
! TGCCCAGTGCCGGAAGGTTA+AGG + tig0014543:507420-507439 None:intergenic 60.0%
! TTAACCTTCCGGCACTGGGC+AGG - tig0014543:507419-507438 Msa1354780:intron 60.0%
ATGGGTTCTCTGCCCCTGCG+GGG + tig0014543:506414-506433 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + tig0014543:506415-506434 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + tig0014543:506416-506435 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - tig0014543:506443-506462 Msa1354780:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - tig0014543:506452-506471 Msa1354780:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + tig0014543:506456-506475 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + tig0014543:506535-506554 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - tig0014543:506582-506601 Msa1354780:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - tig0014543:506709-506728 Msa1354780:CDS 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + tig0014543:506749-506768 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - tig0014543:506750-506769 Msa1354780:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG + tig0014543:506844-506863 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG - tig0014543:506845-506864 Msa1354780:CDS 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG + tig0014543:506858-506877 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG + tig0014543:506859-506878 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG + tig0014543:506863-506882 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - tig0014543:506892-506911 Msa1354780:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - tig0014543:506893-506912 Msa1354780:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG + tig0014543:506901-506920 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - tig0014543:506947-506966 Msa1354780:intron 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + tig0014543:506958-506977 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + tig0014543:507002-507021 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG + tig0014543:507119-507138 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG - tig0014543:507140-507159 Msa1354780:intron 65.0%
! CTGGGCACTGTCTCGGAGAG+AGG + tig0014543:507267-507286 None:intergenic 65.0%
AGTTACGGCCGCCGTTCACC+GGG - tig0014543:507354-507373 Msa1354780:intron 65.0%
!! TCGCCGGCTTCCCTGTCATC+AGG - tig0014543:507384-507403 Msa1354780:intron 65.0%
CAGGCGTCAGCCCCCATACA+TGG - tig0014543:507438-507457 Msa1354780:intron 65.0%
ATGGGTTCTCTGCCCCTGCG+GGG + tig0014543:506414-506433 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + tig0014543:506415-506434 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + tig0014543:506416-506435 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - tig0014543:506443-506462 Msa1354780:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - tig0014543:506452-506471 Msa1354780:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + tig0014543:506456-506475 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + tig0014543:506535-506554 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - tig0014543:506582-506601 Msa1354780:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - tig0014543:506709-506728 Msa1354780:CDS 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + tig0014543:506749-506768 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - tig0014543:506750-506769 Msa1354780:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG + tig0014543:506844-506863 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG - tig0014543:506845-506864 Msa1354780:CDS 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG + tig0014543:506858-506877 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG + tig0014543:506859-506878 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG + tig0014543:506863-506882 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - tig0014543:506892-506911 Msa1354780:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - tig0014543:506893-506912 Msa1354780:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG + tig0014543:506901-506920 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - tig0014543:506947-506966 Msa1354780:intron 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + tig0014543:506958-506977 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + tig0014543:507002-507021 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG + tig0014543:507119-507138 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG - tig0014543:507140-507159 Msa1354780:intron 65.0%
! CTGGGCACTGTCTCGGAGAG+AGG + tig0014543:507267-507286 None:intergenic 65.0%
AGTTACGGCCGCCGTTCACC+GGG - tig0014543:507354-507373 Msa1354780:intron 65.0%
!! TCGCCGGCTTCCCTGTCATC+AGG - tig0014543:507384-507403 Msa1354780:intron 65.0%
CAGGCGTCAGCCCCCATACA+TGG - tig0014543:507438-507457 Msa1354780:intron 65.0%
GTTCTCTGCCCCTGCGGGGA+TGG + tig0014543:506410-506429 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + tig0014543:506587-506606 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG - tig0014543:506854-506873 Msa1354780:CDS 70.0%
GCAAGACCCACCCGTCGAGC+AGG + tig0014543:506902-506921 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - tig0014543:506954-506973 Msa1354780:intron 70.0%
ACTGATGGCTCGAGCCCCCC+CGG - tig0014543:507102-507121 Msa1354780:intron 70.0%
GTTACGGCCGCCGTTCACCG+GGG - tig0014543:507355-507374 Msa1354780:intron 70.0%
ACCGAAGCCCCGGTGAACGG+CGG + tig0014543:507365-507384 None:intergenic 70.0%
GCGACCGAAGCCCCGGTGAA+CGG + tig0014543:507368-507387 None:intergenic 70.0%
TTCACCGGGGCTTCGGTCGC+CGG - tig0014543:507368-507387 Msa1354780:intron 70.0%
GTTCTCTGCCCCTGCGGGGA+TGG + tig0014543:506410-506429 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + tig0014543:506587-506606 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG - tig0014543:506854-506873 Msa1354780:CDS 70.0%
GCAAGACCCACCCGTCGAGC+AGG + tig0014543:506902-506921 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - tig0014543:506954-506973 Msa1354780:intron 70.0%
ACTGATGGCTCGAGCCCCCC+CGG - tig0014543:507102-507121 Msa1354780:intron 70.0%
GTTACGGCCGCCGTTCACCG+GGG - tig0014543:507355-507374 Msa1354780:intron 70.0%
ACCGAAGCCCCGGTGAACGG+CGG + tig0014543:507365-507384 None:intergenic 70.0%
GCGACCGAAGCCCCGGTGAA+CGG + tig0014543:507368-507387 None:intergenic 70.0%
TTCACCGGGGCTTCGGTCGC+CGG - tig0014543:507368-507387 Msa1354780:intron 70.0%
ATGGCTCGAGCCCCCCCGGA+AGG - tig0014543:507106-507125 Msa1354780:intron 75.0%
GCCGCCGTTCACCGGGGCTT+CGG - tig0014543:507361-507380 Msa1354780:intron 75.0%
GAAGCCGGCGACCGAAGCCC+CGG + tig0014543:507375-507394 None:intergenic 75.0%
! GACGCCTGCCCAGTGCCGGA+AGG + tig0014543:507426-507445 None:intergenic 75.0%
GGCTGACGCCTGCCCAGTGC+CGG + tig0014543:507430-507449 None:intergenic 75.0%
ATGGCTCGAGCCCCCCCGGA+AGG - tig0014543:507106-507125 Msa1354780:intron 75.0%
GCCGCCGTTCACCGGGGCTT+CGG - tig0014543:507361-507380 Msa1354780:intron 75.0%
GAAGCCGGCGACCGAAGCCC+CGG + tig0014543:507375-507394 None:intergenic 75.0%
! GACGCCTGCCCAGTGCCGGA+AGG + tig0014543:507426-507445 None:intergenic 75.0%
GGCTGACGCCTGCCCAGTGC+CGG + tig0014543:507430-507449 None:intergenic 75.0%
! GCTCGAGCCCCCCCGGAAGG+AGG - tig0014543:507109-507128 Msa1354780:intron 80.0%
! GCTCGAGCCCCCCCGGAAGG+AGG - tig0014543:507109-507128 Msa1354780:intron 80.0%
Chromosome Type Strat End Strand Name
tig0014543 gene 506010 507495 506010 ID=Msa1354780;Name=Msa1354780
tig0014543 mRNA 506010 507495 506010 ID=Msa1354780-mRNA-1;Parent=Msa1354780;Name=Msa1354780-mRNA-1;_AED=0.47;_eAED=0.48;_QI=0|0|0|0.5|1|1|6|0|280
tig0014543 exon 507439 507495 507439 ID=Msa1354780-mRNA-1:exon:9228;Parent=Msa1354780-mRNA-1
tig0014543 exon 507246 507320 507246 ID=Msa1354780-mRNA-1:exon:9227;Parent=Msa1354780-mRNA-1
tig0014543 exon 507008 507086 507008 ID=Msa1354780-mRNA-1:exon:9226;Parent=Msa1354780-mRNA-1
tig0014543 exon 506676 506886 506676 ID=Msa1354780-mRNA-1:exon:9225;Parent=Msa1354780-mRNA-1
tig0014543 exon 506437 506581 506437 ID=Msa1354780-mRNA-1:exon:9224;Parent=Msa1354780-mRNA-1
tig0014543 exon 506010 506285 506010 ID=Msa1354780-mRNA-1:exon:9223;Parent=Msa1354780-mRNA-1
tig0014543 CDS 507439 507495 507439 ID=Msa1354780-mRNA-1:cds;Parent=Msa1354780-mRNA-1
tig0014543 CDS 507246 507320 507246 ID=Msa1354780-mRNA-1:cds;Parent=Msa1354780-mRNA-1
tig0014543 CDS 507008 507086 507008 ID=Msa1354780-mRNA-1:cds;Parent=Msa1354780-mRNA-1
tig0014543 CDS 506676 506886 506676 ID=Msa1354780-mRNA-1:cds;Parent=Msa1354780-mRNA-1
tig0014543 CDS 506437 506581 506437 ID=Msa1354780-mRNA-1:cds;Parent=Msa1354780-mRNA-1
tig0014543 CDS 506010 506285 506010 ID=Msa1354780-mRNA-1:cds;Parent=Msa1354780-mRNA-1
Gene Sequence

>Msa1354780

ATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAAAGGTTTTGGTTTTTTCATGTTGTCAAAGAGTTGAACAATCAAAATAGATGGCGATTGCCTGATCGAATTGATCAGGGGCAGAGAACCCATCGCTGTTTCGGCTGTGATACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGATCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGTCTGTACTGGCACAAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGGTCACCAACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAA

Protein sequence

>Msa1354780

MDWCGSSTPRTPEYRTMNERFWFFHVVKELNNQNRWRLPDRIDQGQRTHRCFGCDTGGSGEVGIGEHSSWGKGPLNALTPTPDMDRTVSRRSEPSSRTALMGEQPNPWNILQLQVAKSRHRGAKPSRRCELLGKISLLSLDQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLGLYWHKVQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLNLPALGRRQPPYMVLRLCGDLCFW*