AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1385390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1385390 MtrunA17_Chr4g0016151 100.000 82 0 0 199 280 1 82 7.40e-55 172
Msa1385390 MtrunA17_CPg0492351 100.000 82 0 0 199 280 1 82 7.40e-55 172
Msa1385390 MtrunA17_Chr7g0229411 98.780 82 1 0 199 280 1 82 3.39e-54 170
Msa1385390 MtrunA17_Chr4g0000631 98.780 82 1 0 199 280 1 82 3.50e-54 170
Msa1385390 MtrunA17_Chr5g0435911 97.561 82 2 0 199 280 1 82 1.38e-52 166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 122 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTTCATGGTTCGATATTC+TGG 0.185586 tig0020748:-92318 None:intergenic
TGCACGCCTCCGTTACCTTT+TGG 0.196515 tig0020748:+93259 Msa1385390:CDS
CAGCTCACGTACCGCTTTAA+TGG 0.245260 tig0020748:+92964 Msa1385390:CDS
TCATGCCTTTACTTCGTTCA+TGG 0.272664 tig0020748:-92331 None:intergenic
GGCTGTGATACCGGAGGCTC+TGG 0.279951 tig0020748:+92718 Msa1385390:CDS
TCTCAGGTAGACAGTTTCTA+TGG 0.287253 tig0020748:-93294 None:intergenic
GCACGAAAGGCGTAACGATC+TGG 0.311741 tig0020748:-93558 None:intergenic
TCTAACGCCCACACCGGATA+TGG 0.325084 tig0020748:+92913 Msa1385390:CDS
CAGAGAACCCATCGCTGTTT+CGG 0.333458 tig0020748:+92697 Msa1385390:CDS
TCCTCGGGCCAGACGGAGAT+TGG 0.349112 tig0020748:-93230 None:intergenic
TCCCGTCGATGTGAGCTCTT+GGG 0.355274 tig0020748:+93058 Msa1385390:CDS
CACCAACTTCCTTAACCTTC+CGG 0.362818 tig0020748:+93683 Msa1385390:CDS
TTCACCGGGGCTTCGGTCGC+CGG 0.371598 tig0020748:+93643 Msa1385390:CDS
CAAAGTCGTAAGACCATGTA+TGG 0.380055 tig0020748:-93726 None:intergenic
AAAGTTACTCTAGGGATAAC+AGG 0.383241 tig0020748:-93090 None:intergenic
CATTAAAGCGGTACGTGAGC+TGG 0.384796 tig0020748:-92963 None:intergenic
TTCCCGTCGATGTGAGCTCT+TGG 0.386490 tig0020748:+93057 Msa1385390:CDS
AGCTCACGTACCGCTTTAAT+GGG 0.395506 tig0020748:+92965 Msa1385390:CDS
GCCGCCGTTCACCGGGGCTT+CGG 0.397671 tig0020748:+93636 Msa1385390:CDS
CGCTGTTTCGGCTGTGATAC+CGG 0.403155 tig0020748:+92709 Msa1385390:CDS
AATAGGAGAGCACTCATCTT+GGG 0.408942 tig0020748:+92750 Msa1385390:CDS
TGCCCAGTGCCGGAAGGTTA+AGG 0.409134 tig0020748:-93692 None:intergenic
CCCTTCTGCCTTTGCACTCG+AGG 0.411231 tig0020748:+93206 Msa1385390:CDS
CTCACATCGACGGGAAGGTT+TGG 0.420533 tig0020748:-93050 None:intergenic
CTTCCTTAACCTTCCGGCAC+TGG 0.422146 tig0020748:+93689 Msa1385390:CDS
TGTAGTATGTTCCAAGGGTT+GGG 0.424624 tig0020748:-92995 None:intergenic
TAGTTACGGCCGCCGTTCAC+CGG 0.432611 tig0020748:+93628 Msa1385390:CDS
GGCTGACGCCTGCCCAGTGC+CGG 0.435469 tig0020748:-93702 None:intergenic
TTAACCTTCCGGCACTGGGC+AGG 0.436659 tig0020748:+93694 Msa1385390:CDS
AGTTACGGCCGCCGTTCACC+GGG 0.437053 tig0020748:+93629 Msa1385390:CDS
AGTTGAACAATCAAAATAGA+TGG 0.442588 tig0020748:+92488 Msa1385390:CDS
CCACCAAGTTCGGGATGGAT+TGG 0.447763 tig0020748:+92271 None:intergenic
CTGTAGTATGTTCCAAGGGT+TGG 0.452990 tig0020748:-92996 None:intergenic
TCGCCGGCTTCCCTGTCATC+AGG 0.453580 tig0020748:+93659 Msa1385390:CDS
GAGACAGTTCGGTCCATATC+CGG 0.455659 tig0020748:-92926 None:intergenic
ACAGACCAAGGGACAGTCTC+AGG 0.456050 tig0020748:-93310 None:intergenic
CAGAACGTCGTGAGACAGTT+CGG 0.457061 tig0020748:-92937 None:intergenic
GAAGCCGGCGACCGAAGCCC+CGG 0.461073 tig0020748:-93647 None:intergenic
CCTTCTGCCTTTGCACTCGA+GGG 0.461384 tig0020748:+93207 Msa1385390:CDS
GACTGTCCCTTGGTCTGTAC+TGG 0.464231 tig0020748:+93315 Msa1385390:CDS
CCCCAAGAGCTCACATCGAC+GGG 0.472021 tig0020748:-93059 None:intergenic
TACATGGTCTTACGACTTTG+CGG 0.476001 tig0020748:+93729 Msa1385390:CDS
GTTCGATATTCTGGTGTCCT+AGG 0.478291 tig0020748:-92309 None:intergenic
TCCGACTTCCCCAGAGCCTC+CGG 0.480691 tig0020748:-92728 None:intergenic
CTCGAGGGCCAATCTCCGTC+TGG 0.480699 tig0020748:+93222 Msa1385390:CDS
TGCCGGAAGGTTAAGGAAGT+TGG 0.485164 tig0020748:-93685 None:intergenic
GAATAGGAGAGCACTCATCT+TGG 0.487596 tig0020748:+92749 Msa1385390:CDS
ACAAGGAATTTCGCTACCTT+AGG 0.488888 tig0020748:+93598 Msa1385390:CDS
GGCTCTGGGGAAGTCGGAAT+AGG 0.491163 tig0020748:+92733 Msa1385390:CDS
CACGAAAGGCGTAACGATCT+GGG 0.491297 tig0020748:-93557 None:intergenic
GAAGTTGGTGACCTGATGAC+AGG 0.495416 tig0020748:-93670 None:intergenic
AGGTAGCGAAATTCCTTGTC+GGG 0.495901 tig0020748:-93594 None:intergenic
ATTGCCTGATCGAATTGATC+AGG 0.499380 tig0020748:+92513 Msa1385390:CDS
TTCCTTAACCTTCCGGCACT+GGG 0.504342 tig0020748:+93690 Msa1385390:CDS
GCGACCGAAGCCCCGGTGAA+CGG 0.505900 tig0020748:-93640 None:intergenic
CACTGTCTCGGAGAGAGGCT+CGG 0.506062 tig0020748:-93534 None:intergenic
GATGTCGGCTCTTCGCCACC+TGG 0.508239 tig0020748:-93021 None:intergenic
GCTGTGATACCGGAGGCTCT+GGG 0.508804 tig0020748:+92719 Msa1385390:CDS
CTCAGGTAGACAGTTTCTAT+GGG 0.510655 tig0020748:-93293 None:intergenic
CCCTCGAGTGCAAAGGCAGA+AGG 0.511073 tig0020748:-93207 None:intergenic
AAGGTAGCGAAATTCCTTGT+CGG 0.511527 tig0020748:-93595 None:intergenic
TAACGATCTGGGCACTGTCT+CGG 0.513539 tig0020748:-93546 None:intergenic
ATGACCTGATCAATTCGATC+AGG 0.514268 tig0020748:-92517 None:intergenic
GATCGTTACGCCTTTCGTGC+GGG 0.516913 tig0020748:+93561 Msa1385390:CDS
TGACCTGATGACAGGGAAGC+CGG 0.518242 tig0020748:-93662 None:intergenic
CCTTAGGACCGTTATAGTTA+CGG 0.519214 tig0020748:+93614 Msa1385390:CDS
GAGGCGTGCAAAGGTTTCCT+CGG 0.526013 tig0020748:-93246 None:intergenic
AGGCGTGCAAAGGTTTCCTC+GGG 0.527025 tig0020748:-93245 None:intergenic
CCCGTCGATGTGAGCTCTTG+GGG 0.534121 tig0020748:+93059 Msa1385390:CDS
CCTTGGTCTGTACTGGCACA+AGG 0.538614 tig0020748:+93322 Msa1385390:CDS
ATTAAAGCGGTACGTGAGCT+GGG 0.539036 tig0020748:-92962 None:intergenic
CTGGGCACTGTCTCGGAGAG+AGG 0.542198 tig0020748:-93539 None:intergenic
AAGGTTTGGCACCTCGATGT+CGG 0.545826 tig0020748:-93036 None:intergenic
TGGGCGAACAGCCCAACCCT+TGG 0.548090 tig0020748:+92984 Msa1385390:CDS
TCCCCAAGAGCTCACATCGA+CGG 0.555494 tig0020748:-93060 None:intergenic
AAAGTCGTAAGACCATGTAT+GGG 0.556989 tig0020748:-93725 None:intergenic
GCCAATCTCCGTCTGGCCCG+AGG 0.562208 tig0020748:+93229 Msa1385390:CDS
TGGAGCTGTAGTATGTTCCA+AGG 0.564153 tig0020748:-93001 None:intergenic
ACCGAAGCCCCGGTGAACGG+CGG 0.564471 tig0020748:-93637 None:intergenic
AGATCGTTACGCCTTTCGTG+CGG 0.565799 tig0020748:+93560 Msa1385390:CDS
ACCGGAGGCTCTGGGGAAGT+CGG 0.567230 tig0020748:+92727 Msa1385390:CDS
GACGCCTGCCCAGTGCCGGA+AGG 0.568365 tig0020748:-93698 None:intergenic
TATCACAGCCGAAACAGCGA+TGG 0.574058 tig0020748:-92705 None:intergenic
CCGTAACTATAACGGTCCTA+AGG 0.574485 tig0020748:-93614 None:intergenic
TTGGAACATACTACAGCTCC+AGG 0.579135 tig0020748:+93003 Msa1385390:CDS
TAAGTTCCGACCCGCACGAA+AGG 0.581321 tig0020748:-93571 None:intergenic
GTCTACCTGAGACTGTCCCT+TGG 0.586612 tig0020748:+93305 Msa1385390:CDS
AAGGTAACGGAGGCGTGCAA+AGG 0.595805 tig0020748:-93255 None:intergenic
CCTCGAGTGCAAAGGCAGAA+GGG 0.595841 tig0020748:-93206 None:intergenic
AAAGGTTTCCTCGGGCCAGA+CGG 0.597813 tig0020748:-93237 None:intergenic
CTGTGATACCGGAGGCTCTG+GGG 0.598997 tig0020748:+92720 Msa1385390:CDS
AACGGCGGCCGTAACTATAA+CGG 0.599287 tig0020748:-93622 None:intergenic
GTTACGCCTTTCGTGCGGGT+CGG 0.605304 tig0020748:+93565 Msa1385390:CDS
GGTGTGGTTCCTCTACGCCT+AGG 0.606362 tig0020748:+92292 Msa1385390:CDS
TGGGGCGTAGGCCTCCCAAA+AGG 0.606913 tig0020748:-93274 None:intergenic
GTTCGGTCCATATCCGGTGT+GGG 0.608178 tig0020748:-92920 None:intergenic
AAGAGCTCACATCGACGGGA+AGG 0.613365 tig0020748:-93055 None:intergenic
AGTTCGGTCCATATCCGGTG+TGG 0.618273 tig0020748:-92921 None:intergenic
GGGCTGTTCGCCCATTAAAG+CGG 0.619701 tig0020748:-92975 None:intergenic
ATCACAGCCGAAACAGCGAT+GGG 0.621115 tig0020748:-92704 None:intergenic
AAGTCGTAAGACCATGTATG+GGG 0.621859 tig0020748:-93724 None:intergenic
TTCTGGTGTCCTAGGCGTAG+AGG 0.622900 tig0020748:-92301 None:intergenic
AGACAGTTTCTATGGGGCGT+AGG 0.622986 tig0020748:-93286 None:intergenic
ATAGGAGAGCACTCATCTTG+GGG 0.623240 tig0020748:+92751 Msa1385390:CDS
AAGTTGGTGACCTGATGACA+GGG 0.627282 tig0020748:-93669 None:intergenic
GTAGGCCTCCCAAAAGGTAA+CGG 0.632223 tig0020748:-93268 None:intergenic
AAGTTCGGGATGGATTGGTG+TGG 0.636372 tig0020748:+92276 None:intergenic
GGAGCTGTAGTATGTTCCAA+GGG 0.640199 tig0020748:-93000 None:intergenic
TAGACATGTCTGTGAAGATG+CGG 0.645281 tig0020748:-93506 None:intergenic
CCTTGTGCCAGTACAGACCA+AGG 0.645647 tig0020748:-93322 None:intergenic
GGGTCGGAACTTACCCGACA+AGG 0.655880 tig0020748:+93581 Msa1385390:CDS
CAATGCTCTAACGCCCACAC+CGG 0.666176 tig0020748:+92907 Msa1385390:CDS
AGATTGGCCCTCGAGTGCAA+AGG 0.670375 tig0020748:-93214 None:intergenic
GGCCTCCCAAAAGGTAACGG+AGG 0.683463 tig0020748:-93265 None:intergenic
AGTCGTAAGACCATGTATGG+GGG 0.686647 tig0020748:-93723 None:intergenic
CTTGTGCCAGTACAGACCAA+GGG 0.693537 tig0020748:-93321 None:intergenic
GTGGGCGTTAGAGCATTGAG+AGG 0.697492 tig0020748:-92902 None:intergenic
GTGGCGAAGAGCCGACATCG+AGG 0.704477 tig0020748:+93025 Msa1385390:CDS
TGTTTCGGCTGTGATACCGG+AGG 0.717886 tig0020748:+92712 Msa1385390:CDS
TCAGGTAGACAGTTTCTATG+GGG 0.720720 tig0020748:-93292 None:intergenic
GTTACGGCCGCCGTTCACCG+GGG 0.732311 tig0020748:+93630 Msa1385390:CDS
GAACATACTACAGCTCCAGG+TGG 0.771466 tig0020748:+93006 Msa1385390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGTTGAACAATCAAAATAGA+TGG + tig0020748:92488-92507 Msa1385390:CDS 25.0%
! AGTTGAACAATCAAAATAGA+TGG + tig0020748:92488-92507 Msa1385390:CDS 25.0%
CACCTATCGTTAATGAAAAA+CGG + tig0020748:92612-92631 Msa1385390:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG - tig0020748:92653-92672 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG - tig0020748:93101-93120 None:intergenic 30.0%
CACCTATCGTTAATGAAAAA+CGG + tig0020748:92612-92631 Msa1385390:intron 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG - tig0020748:92653-92672 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG - tig0020748:93101-93120 None:intergenic 30.0%
! CATATTGACTAGTCAATGTC+AGG + tig0020748:92362-92381 Msa1385390:intron 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG - tig0020748:92617-92636 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG - tig0020748:93093-93112 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG - tig0020748:93102-93121 None:intergenic 35.0%
AAAGTCGTAAGACCATGTAT+GGG - tig0020748:93728-93747 None:intergenic 35.0%
! CATATTGACTAGTCAATGTC+AGG + tig0020748:92362-92381 Msa1385390:intron 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG - tig0020748:92617-92636 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG - tig0020748:93093-93112 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG - tig0020748:93102-93121 None:intergenic 35.0%
AAAGTCGTAAGACCATGTAT+GGG - tig0020748:93728-93747 None:intergenic 35.0%
TCGTTCATGGTTCGATATTC+TGG - tig0020748:92321-92340 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG + tig0020748:92326-92345 Msa1385390:intron 40.0%
TCATGCCTTTACTTCGTTCA+TGG - tig0020748:92334-92353 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG - tig0020748:92426-92445 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG + tig0020748:92426-92445 Msa1385390:intron 40.0%
ATTGCCTGATCGAATTGATC+AGG + tig0020748:92513-92532 Msa1385390:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG - tig0020748:92520-92539 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG + tig0020748:92529-92548 Msa1385390:intron 40.0%
AGAACAAGGTTCAAGTCTAC+CGG + tig0020748:92543-92562 Msa1385390:intron 40.0%
CATTAACGATAGGTGTCAAG+TGG - tig0020748:92607-92626 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG - tig0020748:92647-92666 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG + tig0020748:92750-92769 Msa1385390:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG - tig0020748:92998-93017 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG + tig0020748:93107-93126 Msa1385390:intron 40.0%
TCAGGTAGACAGTTTCTATG+GGG - tig0020748:93295-93314 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG - tig0020748:93296-93315 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG - tig0020748:93297-93316 None:intergenic 40.0%
TAGACATGTCTGTGAAGATG+CGG - tig0020748:93509-93528 None:intergenic 40.0%
AAGGTAGCGAAATTCCTTGT+CGG - tig0020748:93598-93617 None:intergenic 40.0%
ACAAGGAATTTCGCTACCTT+AGG + tig0020748:93598-93617 Msa1385390:CDS 40.0%
CCTTAGGACCGTTATAGTTA+CGG + tig0020748:93614-93633 Msa1385390:CDS 40.0%
AAGTCGTAAGACCATGTATG+GGG - tig0020748:93727-93746 None:intergenic 40.0%
CAAAGTCGTAAGACCATGTA+TGG - tig0020748:93729-93748 None:intergenic 40.0%
! TACATGGTCTTACGACTTTG+CGG + tig0020748:93729-93748 Msa1385390:CDS 40.0%
TCGTTCATGGTTCGATATTC+TGG - tig0020748:92321-92340 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG + tig0020748:92326-92345 Msa1385390:intron 40.0%
TCATGCCTTTACTTCGTTCA+TGG - tig0020748:92334-92353 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG - tig0020748:92426-92445 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG + tig0020748:92426-92445 Msa1385390:intron 40.0%
ATTGCCTGATCGAATTGATC+AGG + tig0020748:92513-92532 Msa1385390:CDS 40.0%
ATGACCTGATCAATTCGATC+AGG - tig0020748:92520-92539 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG + tig0020748:92529-92548 Msa1385390:intron 40.0%
AGAACAAGGTTCAAGTCTAC+CGG + tig0020748:92543-92562 Msa1385390:intron 40.0%
CATTAACGATAGGTGTCAAG+TGG - tig0020748:92607-92626 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG - tig0020748:92647-92666 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG + tig0020748:92750-92769 Msa1385390:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG - tig0020748:92998-93017 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG + tig0020748:93107-93126 Msa1385390:intron 40.0%
TCAGGTAGACAGTTTCTATG+GGG - tig0020748:93295-93314 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG - tig0020748:93296-93315 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG - tig0020748:93297-93316 None:intergenic 40.0%
TAGACATGTCTGTGAAGATG+CGG - tig0020748:93509-93528 None:intergenic 40.0%
AAGGTAGCGAAATTCCTTGT+CGG - tig0020748:93598-93617 None:intergenic 40.0%
ACAAGGAATTTCGCTACCTT+AGG + tig0020748:93598-93617 Msa1385390:CDS 40.0%
CCTTAGGACCGTTATAGTTA+CGG + tig0020748:93614-93633 Msa1385390:CDS 40.0%
AAGTCGTAAGACCATGTATG+GGG - tig0020748:93727-93746 None:intergenic 40.0%
CAAAGTCGTAAGACCATGTA+TGG - tig0020748:93729-93748 None:intergenic 40.0%
! TACATGGTCTTACGACTTTG+CGG + tig0020748:93729-93748 Msa1385390:CDS 40.0%
GTTCGATATTCTGGTGTCCT+AGG - tig0020748:92312-92331 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG + tig0020748:92379-92398 Msa1385390:intron 45.0%
GTCCTAATTCTTGACTGGAG+AGG + tig0020748:92384-92403 Msa1385390:intron 45.0%
GTCCTCTCCAGTCAAGAATT+AGG - tig0020748:92389-92408 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG - tig0020748:92427-92446 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG + tig0020748:92425-92444 Msa1385390:intron 45.0%
ATCCCTTGAATAGCTAGGGA+TGG - tig0020748:92431-92450 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG + tig0020748:92430-92449 Msa1385390:intron 45.0%
TCCCTAGCTATTCAAGGGAT+GGG + tig0020748:92431-92450 Msa1385390:intron 45.0%
TTCAAGTCTACCGGTCTGTT+AGG + tig0020748:92552-92571 Msa1385390:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG - tig0020748:92581-92600 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG + tig0020748:92749-92768 Msa1385390:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG + tig0020748:92751-92770 Msa1385390:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG + tig0020748:92832-92851 Msa1385390:intron 45.0%
ATTAAAGCGGTACGTGAGCT+GGG - tig0020748:92965-92984 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG + tig0020748:92965-92984 Msa1385390:CDS 45.0%
CTGTAGTATGTTCCAAGGGT+TGG - tig0020748:92999-93018 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG - tig0020748:93003-93022 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG - tig0020748:93004-93023 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG + tig0020748:93003-93022 Msa1385390:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG + tig0020748:93348-93367 Msa1385390:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG - tig0020748:93458-93477 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG - tig0020748:93459-93478 None:intergenic 45.0%
AGGGAACAGTGAAGCTTCAT+AGG + tig0020748:93458-93477 Msa1385390:intron 45.0%
GGGAACAGTGAAGCTTCATA+GGG + tig0020748:93459-93478 Msa1385390:intron 45.0%
TTCATAGGGTCTTTCTGTCC+AGG + tig0020748:93473-93492 Msa1385390:intron 45.0%
AGGTAGCGAAATTCCTTGTC+GGG - tig0020748:93597-93616 None:intergenic 45.0%
CCGTAACTATAACGGTCCTA+AGG - tig0020748:93617-93636 None:intergenic 45.0%
!! AAGTTGGTGACCTGATGACA+GGG - tig0020748:93672-93691 None:intergenic 45.0%
CACCAACTTCCTTAACCTTC+CGG + tig0020748:93683-93702 Msa1385390:CDS 45.0%
AGTCGTAAGACCATGTATGG+GGG - tig0020748:93726-93745 None:intergenic 45.0%
! TTTGCGGAGACCTGTGTTTT+TGG + tig0020748:93745-93764 Msa1385390:CDS 45.0%
GTTCGATATTCTGGTGTCCT+AGG - tig0020748:92312-92331 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG + tig0020748:92379-92398 Msa1385390:intron 45.0%
GTCCTAATTCTTGACTGGAG+AGG + tig0020748:92384-92403 Msa1385390:intron 45.0%
GTCCTCTCCAGTCAAGAATT+AGG - tig0020748:92389-92408 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG - tig0020748:92427-92446 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG + tig0020748:92425-92444 Msa1385390:intron 45.0%
ATCCCTTGAATAGCTAGGGA+TGG - tig0020748:92431-92450 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG + tig0020748:92430-92449 Msa1385390:intron 45.0%
TCCCTAGCTATTCAAGGGAT+GGG + tig0020748:92431-92450 Msa1385390:intron 45.0%
TTCAAGTCTACCGGTCTGTT+AGG + tig0020748:92552-92571 Msa1385390:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG - tig0020748:92581-92600 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG + tig0020748:92749-92768 Msa1385390:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG + tig0020748:92751-92770 Msa1385390:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG + tig0020748:92832-92851 Msa1385390:intron 45.0%
ATTAAAGCGGTACGTGAGCT+GGG - tig0020748:92965-92984 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG + tig0020748:92965-92984 Msa1385390:CDS 45.0%
CTGTAGTATGTTCCAAGGGT+TGG - tig0020748:92999-93018 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG - tig0020748:93003-93022 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG - tig0020748:93004-93023 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG + tig0020748:93003-93022 Msa1385390:CDS 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG + tig0020748:93348-93367 Msa1385390:intron 45.0%
ATGAAGCTTCACTGTTCCCT+GGG - tig0020748:93458-93477 None:intergenic 45.0%
TATGAAGCTTCACTGTTCCC+TGG - tig0020748:93459-93478 None:intergenic 45.0%
AGGGAACAGTGAAGCTTCAT+AGG + tig0020748:93458-93477 Msa1385390:intron 45.0%
GGGAACAGTGAAGCTTCATA+GGG + tig0020748:93459-93478 Msa1385390:intron 45.0%
TTCATAGGGTCTTTCTGTCC+AGG + tig0020748:93473-93492 Msa1385390:intron 45.0%
AGGTAGCGAAATTCCTTGTC+GGG - tig0020748:93597-93616 None:intergenic 45.0%
CCGTAACTATAACGGTCCTA+AGG - tig0020748:93617-93636 None:intergenic 45.0%
!! AAGTTGGTGACCTGATGACA+GGG - tig0020748:93672-93691 None:intergenic 45.0%
CACCAACTTCCTTAACCTTC+CGG + tig0020748:93683-93702 Msa1385390:CDS 45.0%
AGTCGTAAGACCATGTATGG+GGG - tig0020748:93726-93745 None:intergenic 45.0%
! TTTGCGGAGACCTGTGTTTT+TGG + tig0020748:93745-93764 Msa1385390:CDS 45.0%
TTGACTGGAGAGGACACCAA+AGG + tig0020748:92394-92413 Msa1385390:intron 50.0%
CCCCATCCCTTGAATAGCTA+GGG - tig0020748:92435-92454 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG + tig0020748:92432-92451 Msa1385390:intron 50.0%
CCTAGCTATTCAAGGGATGG+GGG + tig0020748:92433-92452 Msa1385390:intron 50.0%
CAGAGAACCCATCGCTGTTT+CGG + tig0020748:92697-92716 Msa1385390:CDS 50.0%
ATCACAGCCGAAACAGCGAT+GGG - tig0020748:92707-92726 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG - tig0020748:92708-92727 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG - tig0020748:92839-92858 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG - tig0020748:92879-92898 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG - tig0020748:92929-92948 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG - tig0020748:92940-92959 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG - tig0020748:92966-92985 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG + tig0020748:92964-92983 Msa1385390:CDS 50.0%
GAACATACTACAGCTCCAGG+TGG + tig0020748:93006-93025 Msa1385390:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG - tig0020748:93039-93058 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG - tig0020748:93271-93290 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG - tig0020748:93289-93308 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG - tig0020748:93324-93343 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG - tig0020748:93365-93384 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG + tig0020748:93362-93381 Msa1385390:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG - tig0020748:93410-93429 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG + tig0020748:93438-93457 Msa1385390:intron 50.0%
AAAGCCCAAAGCCAATCCCA+GGG + tig0020748:93439-93458 Msa1385390:intron 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG - tig0020748:93446-93465 None:intergenic 50.0%
! TAACGATCTGGGCACTGTCT+CGG - tig0020748:93549-93568 None:intergenic 50.0%
! CACGAAAGGCGTAACGATCT+GGG - tig0020748:93560-93579 None:intergenic 50.0%
AGATCGTTACGCCTTTCGTG+CGG + tig0020748:93560-93579 Msa1385390:CDS 50.0%
AACGGCGGCCGTAACTATAA+CGG - tig0020748:93625-93644 None:intergenic 50.0%
!! GAAGTTGGTGACCTGATGAC+AGG - tig0020748:93673-93692 None:intergenic 50.0%
TGCCGGAAGGTTAAGGAAGT+TGG - tig0020748:93688-93707 None:intergenic 50.0%
TTCCTTAACCTTCCGGCACT+GGG + tig0020748:93690-93709 Msa1385390:CDS 50.0%
TTGACTGGAGAGGACACCAA+AGG + tig0020748:92394-92413 Msa1385390:intron 50.0%
CCCCATCCCTTGAATAGCTA+GGG - tig0020748:92435-92454 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG + tig0020748:92432-92451 Msa1385390:intron 50.0%
CCTAGCTATTCAAGGGATGG+GGG + tig0020748:92433-92452 Msa1385390:intron 50.0%
CAGAGAACCCATCGCTGTTT+CGG + tig0020748:92697-92716 Msa1385390:CDS 50.0%
ATCACAGCCGAAACAGCGAT+GGG - tig0020748:92707-92726 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG - tig0020748:92708-92727 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG - tig0020748:92839-92858 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG - tig0020748:92879-92898 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG - tig0020748:92929-92948 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG - tig0020748:92940-92959 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG - tig0020748:92966-92985 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG + tig0020748:92964-92983 Msa1385390:CDS 50.0%
GAACATACTACAGCTCCAGG+TGG + tig0020748:93006-93025 Msa1385390:CDS 50.0%
AAGGTTTGGCACCTCGATGT+CGG - tig0020748:93039-93058 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG - tig0020748:93271-93290 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG - tig0020748:93289-93308 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG - tig0020748:93324-93343 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG - tig0020748:93365-93384 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG + tig0020748:93362-93381 Msa1385390:intron 50.0%
GCTTAGGTGGAAGGCAAAGA+AGG - tig0020748:93410-93429 None:intergenic 50.0%
AAAAGCCCAAAGCCAATCCC+AGG + tig0020748:93438-93457 Msa1385390:intron 50.0%
AAAGCCCAAAGCCAATCCCA+GGG + tig0020748:93439-93458 Msa1385390:intron 50.0%
!! TGTTCCCTGGGATTGGCTTT+GGG - tig0020748:93446-93465 None:intergenic 50.0%
! TAACGATCTGGGCACTGTCT+CGG - tig0020748:93549-93568 None:intergenic 50.0%
! CACGAAAGGCGTAACGATCT+GGG - tig0020748:93560-93579 None:intergenic 50.0%
AGATCGTTACGCCTTTCGTG+CGG + tig0020748:93560-93579 Msa1385390:CDS 50.0%
AACGGCGGCCGTAACTATAA+CGG - tig0020748:93625-93644 None:intergenic 50.0%
!! GAAGTTGGTGACCTGATGAC+AGG - tig0020748:93673-93692 None:intergenic 50.0%
TGCCGGAAGGTTAAGGAAGT+TGG - tig0020748:93688-93707 None:intergenic 50.0%
TTCCTTAACCTTCCGGCACT+GGG + tig0020748:93690-93709 Msa1385390:CDS 50.0%
TTCTGGTGTCCTAGGCGTAG+AGG - tig0020748:92304-92323 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG - tig0020748:92436-92455 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG + tig0020748:92440-92459 Msa1385390:intron 55.0%
! GCTGAGGCATCCTAACAGAC+CGG - tig0020748:92565-92584 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG + tig0020748:92672-92691 Msa1385390:intron 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG + tig0020748:92673-92692 Msa1385390:intron 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG + tig0020748:92709-92728 Msa1385390:CDS 55.0%
TGTTTCGGCTGTGATACCGG+AGG + tig0020748:92712-92731 Msa1385390:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG + tig0020748:92755-92774 Msa1385390:intron 55.0%
AAACGCTGGGTAGCCAAGTG+CGG - tig0020748:92815-92834 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG - tig0020748:92828-92847 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG - tig0020748:92829-92848 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG + tig0020748:92843-92862 Msa1385390:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG + tig0020748:92873-92892 Msa1385390:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG - tig0020748:92878-92897 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG + tig0020748:92878-92897 Msa1385390:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG - tig0020748:92884-92903 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG - tig0020748:92905-92924 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG + tig0020748:92907-92926 Msa1385390:CDS 55.0%
TCTAACGCCCACACCGGATA+TGG + tig0020748:92913-92932 Msa1385390:CDS 55.0%
GTTCGGTCCATATCCGGTGT+GGG - tig0020748:92923-92942 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG - tig0020748:92924-92943 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG - tig0020748:92978-92997 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG - tig0020748:93053-93072 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG - tig0020748:93058-93077 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG + tig0020748:93057-93076 Msa1385390:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG + tig0020748:93058-93077 Msa1385390:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG - tig0020748:93063-93082 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG - tig0020748:93148-93167 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG - tig0020748:93209-93228 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG + tig0020748:93207-93226 Msa1385390:CDS 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG - tig0020748:93217-93236 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG - tig0020748:93240-93259 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG - tig0020748:93248-93267 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG - tig0020748:93249-93268 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG - tig0020748:93258-93277 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG + tig0020748:93259-93278 Msa1385390:CDS 55.0%
! GCACGCCTCCGTTACCTTTT+GGG + tig0020748:93260-93279 Msa1385390:CDS 55.0%
GTCTACCTGAGACTGTCCCT+TGG + tig0020748:93305-93324 Msa1385390:CDS 55.0%
ACAGACCAAGGGACAGTCTC+AGG - tig0020748:93313-93332 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG + tig0020748:93315-93334 Msa1385390:CDS 55.0%
CCTTGTGCCAGTACAGACCA+AGG - tig0020748:93325-93344 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG + tig0020748:93322-93341 Msa1385390:CDS 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG - tig0020748:93399-93418 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG - tig0020748:93423-93442 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG - tig0020748:93447-93466 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG - tig0020748:93453-93472 None:intergenic 55.0%
! GCACGAAAGGCGTAACGATC+TGG - tig0020748:93561-93580 None:intergenic 55.0%
GATCGTTACGCCTTTCGTGC+GGG + tig0020748:93561-93580 Msa1385390:CDS 55.0%
TAAGTTCCGACCCGCACGAA+AGG - tig0020748:93574-93593 None:intergenic 55.0%
TGACCTGATGACAGGGAAGC+CGG - tig0020748:93665-93684 None:intergenic 55.0%
CTTCCTTAACCTTCCGGCAC+TGG + tig0020748:93689-93708 Msa1385390:CDS 55.0%
TTCTGGTGTCCTAGGCGTAG+AGG - tig0020748:92304-92323 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG - tig0020748:92436-92455 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG + tig0020748:92440-92459 Msa1385390:intron 55.0%
! GCTGAGGCATCCTAACAGAC+CGG - tig0020748:92565-92584 None:intergenic 55.0%
! TTCTTTTGCTCCATCCCCGC+AGG + tig0020748:92672-92691 Msa1385390:intron 55.0%
! TCTTTTGCTCCATCCCCGCA+GGG + tig0020748:92673-92692 Msa1385390:intron 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG + tig0020748:92709-92728 Msa1385390:CDS 55.0%
TGTTTCGGCTGTGATACCGG+AGG + tig0020748:92712-92731 Msa1385390:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG + tig0020748:92755-92774 Msa1385390:intron 55.0%
AAACGCTGGGTAGCCAAGTG+CGG - tig0020748:92815-92834 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG - tig0020748:92828-92847 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG - tig0020748:92829-92848 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG + tig0020748:92843-92862 Msa1385390:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG + tig0020748:92873-92892 Msa1385390:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG - tig0020748:92878-92897 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG + tig0020748:92878-92897 Msa1385390:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG - tig0020748:92884-92903 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG - tig0020748:92905-92924 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG + tig0020748:92907-92926 Msa1385390:CDS 55.0%
TCTAACGCCCACACCGGATA+TGG + tig0020748:92913-92932 Msa1385390:CDS 55.0%
GTTCGGTCCATATCCGGTGT+GGG - tig0020748:92923-92942 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG - tig0020748:92924-92943 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG - tig0020748:92978-92997 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG - tig0020748:93053-93072 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG - tig0020748:93058-93077 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG + tig0020748:93057-93076 Msa1385390:CDS 55.0%
TCCCGTCGATGTGAGCTCTT+GGG + tig0020748:93058-93077 Msa1385390:CDS 55.0%
TCCCCAAGAGCTCACATCGA+CGG - tig0020748:93063-93082 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG - tig0020748:93148-93167 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG - tig0020748:93209-93228 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG + tig0020748:93207-93226 Msa1385390:CDS 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG - tig0020748:93217-93236 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG - tig0020748:93240-93259 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG - tig0020748:93248-93267 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG - tig0020748:93249-93268 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG - tig0020748:93258-93277 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG + tig0020748:93259-93278 Msa1385390:CDS 55.0%
! GCACGCCTCCGTTACCTTTT+GGG + tig0020748:93260-93279 Msa1385390:CDS 55.0%
GTCTACCTGAGACTGTCCCT+TGG + tig0020748:93305-93324 Msa1385390:CDS 55.0%
ACAGACCAAGGGACAGTCTC+AGG - tig0020748:93313-93332 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG + tig0020748:93315-93334 Msa1385390:CDS 55.0%
CCTTGTGCCAGTACAGACCA+AGG - tig0020748:93325-93344 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG + tig0020748:93322-93341 Msa1385390:CDS 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG - tig0020748:93399-93418 None:intergenic 55.0%
! CTTTTCCTGCGCAGCTTAGG+TGG - tig0020748:93423-93442 None:intergenic 55.0%
!! CTGTTCCCTGGGATTGGCTT+TGG - tig0020748:93447-93466 None:intergenic 55.0%
GCTTCACTGTTCCCTGGGAT+TGG - tig0020748:93453-93472 None:intergenic 55.0%
! GCACGAAAGGCGTAACGATC+TGG - tig0020748:93561-93580 None:intergenic 55.0%
GATCGTTACGCCTTTCGTGC+GGG + tig0020748:93561-93580 Msa1385390:CDS 55.0%
TAAGTTCCGACCCGCACGAA+AGG - tig0020748:93574-93593 None:intergenic 55.0%
TGACCTGATGACAGGGAAGC+CGG - tig0020748:93665-93684 None:intergenic 55.0%
CTTCCTTAACCTTCCGGCAC+TGG + tig0020748:93689-93708 Msa1385390:CDS 55.0%
GGTGTGGTTCCTCTACGCCT+AGG + tig0020748:92292-92311 Msa1385390:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG - tig0020748:92413-92432 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG - tig0020748:92420-92439 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG + tig0020748:92446-92465 Msa1385390:intron 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG + tig0020748:92674-92693 Msa1385390:intron 60.0%
GCTGTGATACCGGAGGCTCT+GGG + tig0020748:92719-92738 Msa1385390:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG + tig0020748:92720-92739 Msa1385390:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG + tig0020748:92733-92752 Msa1385390:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG + tig0020748:92754-92773 Msa1385390:intron 60.0%
GCAGTTATCCGCTCCGCACT+TGG + tig0020748:92799-92818 Msa1385390:intron 60.0%
GGCTACCCAGCGTTTACCGT+TGG + tig0020748:92820-92839 Msa1385390:intron 60.0%
CTAGTACGAGAGGACCGGGA+AGG - tig0020748:92874-92893 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG + tig0020748:92872-92891 Msa1385390:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG - tig0020748:93062-93081 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG + tig0020748:93059-93078 Msa1385390:CDS 60.0%
TCGGCACCGTCGGATCACTA+AGG + tig0020748:93139-93158 Msa1385390:intron 60.0%
CGTCGAGCAGGGACGAAAGT+CGG - tig0020748:93165-93184 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG + tig0020748:93163-93182 Msa1385390:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG + tig0020748:93164-93183 Msa1385390:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG + tig0020748:93206-93225 Msa1385390:CDS 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG - tig0020748:93210-93229 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG + tig0020748:93263-93282 Msa1385390:CDS 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG - tig0020748:93268-93287 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG - tig0020748:93395-93414 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG - tig0020748:93396-93415 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG - tig0020748:93397-93416 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG - tig0020748:93398-93417 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG - tig0020748:93419-93438 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG - tig0020748:93426-93445 None:intergenic 60.0%
GGGTCTTTCTGTCCAGGTGC+AGG + tig0020748:93479-93498 Msa1385390:intron 60.0%
! AGATGCGGACTACCTGCACC+TGG - tig0020748:93494-93513 None:intergenic 60.0%
CACTGTCTCGGAGAGAGGCT+CGG - tig0020748:93537-93556 None:intergenic 60.0%
GTTACGCCTTTCGTGCGGGT+CGG + tig0020748:93565-93584 Msa1385390:CDS 60.0%
GGGTCGGAACTTACCCGACA+AGG + tig0020748:93581-93600 Msa1385390:CDS 60.0%
TAGTTACGGCCGCCGTTCAC+CGG + tig0020748:93628-93647 Msa1385390:CDS 60.0%
! TGCCCAGTGCCGGAAGGTTA+AGG - tig0020748:93695-93714 None:intergenic 60.0%
! TTAACCTTCCGGCACTGGGC+AGG + tig0020748:93694-93713 Msa1385390:CDS 60.0%
GGTGTGGTTCCTCTACGCCT+AGG + tig0020748:92292-92311 Msa1385390:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG - tig0020748:92413-92432 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG - tig0020748:92420-92439 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG + tig0020748:92446-92465 Msa1385390:intron 60.0%
! CTTTTGCTCCATCCCCGCAG+GGG + tig0020748:92674-92693 Msa1385390:intron 60.0%
GCTGTGATACCGGAGGCTCT+GGG + tig0020748:92719-92738 Msa1385390:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG + tig0020748:92720-92739 Msa1385390:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG + tig0020748:92733-92752 Msa1385390:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG + tig0020748:92754-92773 Msa1385390:intron 60.0%
GCAGTTATCCGCTCCGCACT+TGG + tig0020748:92799-92818 Msa1385390:intron 60.0%
GGCTACCCAGCGTTTACCGT+TGG + tig0020748:92820-92839 Msa1385390:intron 60.0%
CTAGTACGAGAGGACCGGGA+AGG - tig0020748:92874-92893 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG + tig0020748:92872-92891 Msa1385390:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG - tig0020748:93062-93081 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG + tig0020748:93059-93078 Msa1385390:CDS 60.0%
TCGGCACCGTCGGATCACTA+AGG + tig0020748:93139-93158 Msa1385390:intron 60.0%
CGTCGAGCAGGGACGAAAGT+CGG - tig0020748:93165-93184 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG + tig0020748:93163-93182 Msa1385390:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG + tig0020748:93164-93183 Msa1385390:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG + tig0020748:93206-93225 Msa1385390:CDS 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG - tig0020748:93210-93229 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG + tig0020748:93263-93282 Msa1385390:CDS 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG - tig0020748:93268-93287 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG - tig0020748:93395-93414 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG - tig0020748:93396-93415 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG - tig0020748:93397-93416 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG - tig0020748:93398-93417 None:intergenic 60.0%
TCCTGCGCAGCTTAGGTGGA+AGG - tig0020748:93419-93438 None:intergenic 60.0%
! GGGCTTTTCCTGCGCAGCTT+AGG - tig0020748:93426-93445 None:intergenic 60.0%
GGGTCTTTCTGTCCAGGTGC+AGG + tig0020748:93479-93498 Msa1385390:intron 60.0%
! AGATGCGGACTACCTGCACC+TGG - tig0020748:93494-93513 None:intergenic 60.0%
CACTGTCTCGGAGAGAGGCT+CGG - tig0020748:93537-93556 None:intergenic 60.0%
GTTACGCCTTTCGTGCGGGT+CGG + tig0020748:93565-93584 Msa1385390:CDS 60.0%
GGGTCGGAACTTACCCGACA+AGG + tig0020748:93581-93600 Msa1385390:CDS 60.0%
TAGTTACGGCCGCCGTTCAC+CGG + tig0020748:93628-93647 Msa1385390:CDS 60.0%
! TGCCCAGTGCCGGAAGGTTA+AGG - tig0020748:93695-93714 None:intergenic 60.0%
! TTAACCTTCCGGCACTGGGC+AGG + tig0020748:93694-93713 Msa1385390:CDS 60.0%
ATGGGTTCTCTGCCCCTGCG+GGG - tig0020748:92689-92708 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG - tig0020748:92690-92709 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG - tig0020748:92691-92710 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG + tig0020748:92718-92737 Msa1385390:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG + tig0020748:92727-92746 Msa1385390:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG - tig0020748:92731-92750 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG - tig0020748:92810-92829 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG + tig0020748:92857-92876 Msa1385390:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG + tig0020748:92984-93003 Msa1385390:CDS 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG - tig0020748:93024-93043 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG + tig0020748:93025-93044 Msa1385390:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG - tig0020748:93119-93138 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG + tig0020748:93120-93139 Msa1385390:intron 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG - tig0020748:93133-93152 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG - tig0020748:93134-93153 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG - tig0020748:93138-93157 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG + tig0020748:93167-93186 Msa1385390:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG + tig0020748:93168-93187 Msa1385390:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG - tig0020748:93176-93195 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG + tig0020748:93222-93241 Msa1385390:CDS 65.0%
TCCTCGGGCCAGACGGAGAT+TGG - tig0020748:93233-93252 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG - tig0020748:93277-93296 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG - tig0020748:93394-93413 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG + tig0020748:93415-93434 Msa1385390:intron 65.0%
! CTGGGCACTGTCTCGGAGAG+AGG - tig0020748:93542-93561 None:intergenic 65.0%
AGTTACGGCCGCCGTTCACC+GGG + tig0020748:93629-93648 Msa1385390:CDS 65.0%
!! TCGCCGGCTTCCCTGTCATC+AGG + tig0020748:93659-93678 Msa1385390:CDS 65.0%
CAGGCGTCAGCCCCCATACA+TGG + tig0020748:93713-93732 Msa1385390:CDS 65.0%
ATGGGTTCTCTGCCCCTGCG+GGG - tig0020748:92689-92708 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG - tig0020748:92690-92709 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG - tig0020748:92691-92710 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG + tig0020748:92718-92737 Msa1385390:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG + tig0020748:92727-92746 Msa1385390:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG - tig0020748:92731-92750 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG - tig0020748:92810-92829 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG + tig0020748:92857-92876 Msa1385390:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG + tig0020748:92984-93003 Msa1385390:CDS 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG - tig0020748:93024-93043 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG + tig0020748:93025-93044 Msa1385390:CDS 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG - tig0020748:93119-93138 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG + tig0020748:93120-93139 Msa1385390:intron 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG - tig0020748:93133-93152 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG - tig0020748:93134-93153 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG - tig0020748:93138-93157 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG + tig0020748:93167-93186 Msa1385390:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG + tig0020748:93168-93187 Msa1385390:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG - tig0020748:93176-93195 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG + tig0020748:93222-93241 Msa1385390:CDS 65.0%
TCCTCGGGCCAGACGGAGAT+TGG - tig0020748:93233-93252 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG - tig0020748:93277-93296 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG - tig0020748:93394-93413 None:intergenic 65.0%
GCCTTCCACCTAAGCTGCGC+AGG + tig0020748:93415-93434 Msa1385390:intron 65.0%
! CTGGGCACTGTCTCGGAGAG+AGG - tig0020748:93542-93561 None:intergenic 65.0%
AGTTACGGCCGCCGTTCACC+GGG + tig0020748:93629-93648 Msa1385390:CDS 65.0%
!! TCGCCGGCTTCCCTGTCATC+AGG + tig0020748:93659-93678 Msa1385390:CDS 65.0%
CAGGCGTCAGCCCCCATACA+TGG + tig0020748:93713-93732 Msa1385390:CDS 65.0%
GTTCTCTGCCCCTGCGGGGA+TGG - tig0020748:92685-92704 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG - tig0020748:92862-92881 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG + tig0020748:93129-93148 Msa1385390:intron 70.0%
GCAAGACCCACCCGTCGAGC+AGG - tig0020748:93177-93196 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG + tig0020748:93229-93248 Msa1385390:CDS 70.0%
ACTGATGGCTCGAGCCCCCC+CGG + tig0020748:93377-93396 Msa1385390:intron 70.0%
GTTACGGCCGCCGTTCACCG+GGG + tig0020748:93630-93649 Msa1385390:CDS 70.0%
ACCGAAGCCCCGGTGAACGG+CGG - tig0020748:93640-93659 None:intergenic 70.0%
GCGACCGAAGCCCCGGTGAA+CGG - tig0020748:93643-93662 None:intergenic 70.0%
TTCACCGGGGCTTCGGTCGC+CGG + tig0020748:93643-93662 Msa1385390:CDS 70.0%
GTTCTCTGCCCCTGCGGGGA+TGG - tig0020748:92685-92704 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG - tig0020748:92862-92881 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG + tig0020748:93129-93148 Msa1385390:intron 70.0%
GCAAGACCCACCCGTCGAGC+AGG - tig0020748:93177-93196 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG + tig0020748:93229-93248 Msa1385390:CDS 70.0%
ACTGATGGCTCGAGCCCCCC+CGG + tig0020748:93377-93396 Msa1385390:intron 70.0%
GTTACGGCCGCCGTTCACCG+GGG + tig0020748:93630-93649 Msa1385390:CDS 70.0%
ACCGAAGCCCCGGTGAACGG+CGG - tig0020748:93640-93659 None:intergenic 70.0%
GCGACCGAAGCCCCGGTGAA+CGG - tig0020748:93643-93662 None:intergenic 70.0%
TTCACCGGGGCTTCGGTCGC+CGG + tig0020748:93643-93662 Msa1385390:CDS 70.0%
ATGGCTCGAGCCCCCCCGGA+AGG + tig0020748:93381-93400 Msa1385390:intron 75.0%
GCCGCCGTTCACCGGGGCTT+CGG + tig0020748:93636-93655 Msa1385390:CDS 75.0%
GAAGCCGGCGACCGAAGCCC+CGG - tig0020748:93650-93669 None:intergenic 75.0%
! GACGCCTGCCCAGTGCCGGA+AGG - tig0020748:93701-93720 None:intergenic 75.0%
GGCTGACGCCTGCCCAGTGC+CGG - tig0020748:93705-93724 None:intergenic 75.0%
ATGGCTCGAGCCCCCCCGGA+AGG + tig0020748:93381-93400 Msa1385390:intron 75.0%
GCCGCCGTTCACCGGGGCTT+CGG + tig0020748:93636-93655 Msa1385390:CDS 75.0%
GAAGCCGGCGACCGAAGCCC+CGG - tig0020748:93650-93669 None:intergenic 75.0%
! GACGCCTGCCCAGTGCCGGA+AGG - tig0020748:93701-93720 None:intergenic 75.0%
GGCTGACGCCTGCCCAGTGC+CGG - tig0020748:93705-93724 None:intergenic 75.0%
! GCTCGAGCCCCCCCGGAAGG+AGG + tig0020748:93384-93403 Msa1385390:intron 80.0%
! GCTCGAGCCCCCCCGGAAGG+AGG + tig0020748:93384-93403 Msa1385390:intron 80.0%
Chromosome Type Strat End Strand Name
tig0020748 gene 92285 93770 92285 ID=Msa1385390;Name=Msa1385390
tig0020748 mRNA 92285 93770 92285 ID=Msa1385390-mRNA-1;Parent=Msa1385390;Name=Msa1385390-mRNA-1;_AED=0.47;_eAED=0.73;_QI=0|0|0|0.5|1|1|6|0|280
tig0020748 exon 92285 92341 92285 ID=Msa1385390-mRNA-1:exon:9549;Parent=Msa1385390-mRNA-1
tig0020748 exon 92460 92534 92460 ID=Msa1385390-mRNA-1:exon:9550;Parent=Msa1385390-mRNA-1
tig0020748 exon 92694 92772 92694 ID=Msa1385390-mRNA-1:exon:9551;Parent=Msa1385390-mRNA-1
tig0020748 exon 92894 93104 92894 ID=Msa1385390-mRNA-1:exon:9552;Parent=Msa1385390-mRNA-1
tig0020748 exon 93199 93343 93199 ID=Msa1385390-mRNA-1:exon:9553;Parent=Msa1385390-mRNA-1
tig0020748 exon 93495 93770 93495 ID=Msa1385390-mRNA-1:exon:9554;Parent=Msa1385390-mRNA-1
tig0020748 CDS 92285 92341 92285 ID=Msa1385390-mRNA-1:cds;Parent=Msa1385390-mRNA-1
tig0020748 CDS 92460 92534 92460 ID=Msa1385390-mRNA-1:cds;Parent=Msa1385390-mRNA-1
tig0020748 CDS 92694 92772 92694 ID=Msa1385390-mRNA-1:cds;Parent=Msa1385390-mRNA-1
tig0020748 CDS 92894 93104 92894 ID=Msa1385390-mRNA-1:cds;Parent=Msa1385390-mRNA-1
tig0020748 CDS 93199 93343 93199 ID=Msa1385390-mRNA-1:cds;Parent=Msa1385390-mRNA-1
tig0020748 CDS 93495 93770 93495 ID=Msa1385390-mRNA-1:cds;Parent=Msa1385390-mRNA-1
Gene Sequence

>Msa1385390

ATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAAAGGTTTTGGTTTTTTCATGTTGTCAAAGAGTTGAACAATCAAAATAGATGGCGATTGCCTGATCGAATTGATCAGGGGCAGAGAACCCATCGCTGTTTCGGCTGTGATACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGATCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGTCTGTACTGGCACAAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTTCCCTGTCATCAGGTCACCAACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAA
Protein sequence

>Msa1385390

MDWCGSSTPRTPEYRTMNERFWFFHVVKELNNQNRWRLPDRIDQGQRTHRCFGCDTGGSGEVGIGEHSSWGKGPLNALTPTPDMDRTVSRRSEPSSRTALMGEQPNPWNILQLQVAKSRHRGAKPSRRCELLGKISLLSLDQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLGLYWHKVQVVRIFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVIVTAAVHRGFGRRLPCHQVTNFLNLPALGRRQPPYMVLRLCGDLCFW*