AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0982900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0982900 MtrunA17_Chr1g0205371 87.576 330 8 1 1 297 1 330 0.0 565
Msa0982900 MtrunA17_Chr1g0205361 71.515 330 60 2 1 297 1 329 3.42e-164 466
Msa0982900 MtrunA17_Chr1g0160851 70.000 330 65 2 1 297 1 329 3.67e-157 447
Msa0982900 MtrunA17_Chr4g0039901 53.289 304 108 2 28 297 28 331 6.55e-106 317
Msa0982900 MtrunA17_Chr8g0355961 50.152 329 124 4 8 297 11 338 3.77e-104 313
Msa0982900 MtrunA17_Chr8g0356001 49.390 328 128 4 8 297 11 338 1.05e-101 306
Msa0982900 MtrunA17_Chr2g0314731 47.432 331 138 3 1 297 1 329 2.76e-99 300
Msa0982900 MtrunA17_Chr2g0314721 47.432 331 138 3 1 297 12 340 4.94e-99 300
Msa0982900 MtrunA17_Chr5g0395321 46.526 331 135 4 1 297 7 329 2.09e-96 294
Msa0982900 MtrunA17_Chr1g0176831 46.526 331 141 3 1 297 31 359 5.27e-96 292
Msa0982900 MtrunA17_Chr1g0164211 50.820 305 117 1 25 296 21 325 7.64e-95 289
Msa0982900 MtrunA17_Chr5g0395331 46.562 320 129 5 19 298 20 337 8.23e-94 286
Msa0982900 MtrunA17_Chr1g0160861 84.146 164 26 0 135 298 8 171 1.19e-93 280
Msa0982900 MtrunA17_Chr1g0197891 41.994 331 155 4 1 297 1 328 2.46e-86 266
Msa0982900 MtrunA17_Chr1g0197851 41.390 331 157 4 1 297 1 328 1.79e-84 262
Msa0982900 MtrunA17_Chr1g0197871 41.692 331 156 4 1 297 1 328 8.09e-84 260
Msa0982900 MtrunA17_Chr1g0197881 41.390 331 156 5 1 297 1 327 3.34e-83 258
Msa0982900 MtrunA17_Chr7g0246131 39.645 338 161 6 1 297 1 336 1.54e-80 252
Msa0982900 MtrunA17_Chr5g0395381 41.987 312 154 5 1 298 7 305 2.72e-77 243
Msa0982900 MtrunA17_Chr7g0246221 37.758 339 165 7 1 297 1 335 1.65e-72 231
Msa0982900 MtrunA17_Chr1g0176851 54.688 192 86 1 107 297 20 211 9.95e-69 213
Msa0982900 MtrunA17_Chr7g0246181 38.621 290 140 3 46 297 45 334 7.81e-68 219
Msa0982900 MtrunA17_Chr1g0200961 39.144 327 155 6 9 296 7 328 7.84e-68 219
Msa0982900 MtrunA17_Chr7g0246151 38.872 337 163 6 1 297 1 334 1.23e-66 216
Msa0982900 MtrunA17_Chr7g0246121 37.113 291 139 5 46 296 45 331 2.89e-58 194
Msa0982900 MtrunA17_Chr1g0213671 34.405 311 158 7 30 296 29 337 1.02e-44 159
Msa0982900 MtrunA17_Chr7g0265611 30.435 322 180 6 17 296 28 347 2.16e-44 157
Msa0982900 MtrunA17_Chr4g0057001 28.972 321 185 7 16 297 32 348 2.74e-40 147
Msa0982900 MtrunA17_Chr2g0314771 41.875 160 60 1 70 196 1 160 5.71e-40 137
Msa0982900 MtrunA17_Chr1g0174481 28.144 334 199 5 1 297 4 333 2.07e-39 144
Msa0982900 MtrunA17_Chr3g0101581 27.761 335 199 8 1 296 3 333 8.04e-38 140
Msa0982900 MtrunA17_Chr5g0405001 31.045 335 179 11 8 297 18 345 1.17e-37 139
Msa0982900 MtrunA17_Chr3g0094231 32.476 311 161 9 28 297 29 331 4.52e-37 137
Msa0982900 MtrunA17_Chr8g0372251 30.032 313 169 9 29 297 31 337 4.74e-37 137
Msa0982900 MtrunA17_Chr1g0174461 26.488 336 194 7 7 297 11 338 9.11e-36 134
Msa0982900 MtrunA17_Chr5g0403351 28.783 337 186 10 6 296 6 334 1.02e-35 134
Msa0982900 MtrunA17_Chr8g0390881 25.449 334 201 5 3 292 2 331 2.17e-35 133
Msa0982900 MtrunA17_Chr5g0430111 27.928 333 188 7 6 294 8 332 2.55e-35 132
Msa0982900 MtrunA17_Chr5g0430031 27.187 320 185 6 16 292 16 330 2.91e-35 133
Msa0982900 MtrunA17_Chr2g0310391 26.300 327 200 8 10 297 1 325 5.04e-35 132
Msa0982900 MtrunA17_Chr3g0101751 29.023 348 180 11 7 296 1 339 8.12e-35 132
Msa0982900 MtrunA17_Chr3g0116741 27.545 334 181 8 15 297 24 347 8.98e-35 132
Msa0982900 MtrunA17_Chr3g0101571 30.392 306 164 9 32 296 33 330 1.06e-34 131
Msa0982900 MtrunA17_Chr5g0430101 26.048 334 198 5 1 292 1 327 1.34e-34 131
Msa0982900 MtrunA17_Chr6g0484811 26.531 343 192 8 3 298 8 337 5.94e-34 129
Msa0982900 MtrunA17_Chr3g0116681 30.655 336 186 11 1 297 8 335 7.19e-34 129
Msa0982900 MtrunA17_Chr7g0258221 28.863 343 191 8 1 297 2 337 1.26e-33 128
Msa0982900 MtrunA17_Chr4g0058231 30.000 340 179 13 9 297 2 333 1.53e-33 128
Msa0982900 MtrunA17_Chr3g0094171 29.129 333 184 9 6 297 17 338 2.89e-33 127
Msa0982900 MtrunA17_Chr4g0030701 28.344 314 179 6 30 298 30 342 3.29e-33 127
Msa0982900 MtrunA17_Chr4g0058281 28.358 335 192 9 4 297 18 345 3.82e-33 127
Msa0982900 MtrunA17_Chr6g0484841 26.837 313 181 4 24 294 26 332 1.45e-32 125
Msa0982900 MtrunA17_Chr5g0403331 27.463 335 204 7 1 296 1 335 1.88e-32 125
Msa0982900 MtrunA17_Chr2g0310381 26.300 327 200 9 10 297 1 325 2.07e-32 125
Msa0982900 MtrunA17_Chr4g0056951 28.082 292 165 7 47 297 56 343 2.57e-32 125
Msa0982900 MtrunA17_Chr4g0047661 28.144 334 194 10 3 294 17 346 3.14e-32 124
Msa0982900 MtrunA17_Chr7g0254641 26.349 315 183 7 29 298 33 343 4.24e-32 124
Msa0982900 MtrunA17_Chr3g0101611 31.111 315 158 11 29 296 32 334 4.62e-32 124
Msa0982900 MtrunA17_Chr5g0430131 27.811 338 193 7 1 294 1 331 4.70e-32 124
Msa0982900 MtrunA17_Chr8g0344191 27.273 330 189 10 11 295 44 367 6.71e-32 124
Msa0982900 MtrunA17_Chr7g0224561 28.274 336 182 7 6 297 9 329 1.03e-31 123
Msa0982900 MtrunA17_Chr8g0344181 28.618 304 173 7 33 295 36 336 1.04e-31 123
Msa0982900 MtrunA17_Chr7g0235551 26.875 320 190 7 19 297 19 335 1.17e-31 123
Msa0982900 MtrunA17_Chr8g0344151 27.961 304 175 7 33 295 34 334 1.25e-31 123
Msa0982900 MtrunA17_Chr3g0101821 27.139 339 191 10 6 296 2 332 1.76e-31 122
Msa0982900 MtrunA17_Chr7g0224551 28.190 337 183 7 6 298 9 330 2.08e-31 122
Msa0982900 MtrunA17_Chr7g0255531 28.274 336 188 9 6 297 2 328 2.23e-31 122
Msa0982900 MtrunA17_Chr5g0430081 27.761 335 190 7 5 294 3 330 2.48e-31 122
Msa0982900 MtrunA17_Chr4g0058191 27.052 329 195 8 7 297 1 322 4.61e-31 121
Msa0982900 MtrunA17_Chr4g0047631 28.746 327 188 10 7 294 21 341 6.82e-31 120
Msa0982900 MtrunA17_Chr4g0035921 27.035 344 193 9 4 297 10 345 8.70e-31 120
Msa0982900 MtrunA17_Chr1g0174471 27.410 332 196 7 9 297 25 354 9.75e-31 120
Msa0982900 MtrunA17_Chr1g0174451 26.239 343 199 8 1 297 5 339 1.09e-30 120
Msa0982900 MtrunA17_Chr5g0403321 30.218 321 168 10 25 296 24 337 1.43e-30 120
Msa0982900 MtrunA17_Chr4g0058201 30.201 298 166 8 35 294 28 321 1.46e-30 120
Msa0982900 MtrunA17_Chr3g0101831 26.586 331 190 9 11 296 11 333 1.71e-30 119
Msa0982900 MtrunA17_Chr5g0430091 25.610 328 198 4 6 292 8 330 1.89e-30 119
Msa0982900 MtrunA17_Chr4g0052861 29.254 335 183 11 6 296 5 329 2.80e-30 119
Msa0982900 MtrunA17_Chr8g0382901 26.970 330 197 10 4 296 463 785 3.36e-30 120
Msa0982900 MtrunA17_Chr8g0382901 24.430 307 175 7 29 298 22 308 2.49e-23 100
Msa0982900 MtrunA17_Chr6g0463791 28.354 328 193 13 6 296 5 327 7.22e-30 118
Msa0982900 MtrunA17_Chr1g0162801 28.358 335 183 11 6 296 13 334 8.15e-30 117
Msa0982900 MtrunA17_Chr5g0401681 28.267 329 187 10 10 296 8 329 1.15e-29 117
Msa0982900 MtrunA17_Chr3g0101691 27.596 337 194 11 3 296 7 336 3.44e-29 116
Msa0982900 MtrunA17_Chr4g0052851 30.000 310 179 12 18 296 18 320 6.02e-29 115
Msa0982900 MtrunA17_Chr4g0061381 28.328 293 160 8 44 292 40 326 7.93e-29 115
Msa0982900 MtrunA17_Chr4g0047691 27.778 324 180 8 19 294 27 344 9.70e-29 115
Msa0982900 MtrunA17_Chr3g0101731 26.176 340 193 10 7 296 1 332 1.22e-28 114
Msa0982900 MtrunA17_Chr4g0058261 27.331 311 179 7 30 297 57 363 1.32e-28 114
Msa0982900 MtrunA17_Chr4g0076161 27.381 336 198 12 1 296 1 330 1.94e-28 114
Msa0982900 MtrunA17_Chr5g0445451 25.378 331 186 11 18 296 10 331 2.09e-28 114
Msa0982900 MtrunA17_Chr8g0362701 29.586 338 192 8 2 298 6 338 3.31e-28 113
Msa0982900 MtrunA17_Chr3g0101761 27.742 310 172 9 31 296 31 332 3.60e-28 113
Msa0982900 MtrunA17_Chr8g0357421 28.797 316 169 12 27 296 27 332 3.64e-28 113
Msa0982900 MtrunA17_Chr4g0017411 29.900 301 159 9 35 296 30 317 4.24e-28 113
Msa0982900 MtrunA17_Chr4g0052881 28.882 322 179 9 18 296 16 330 4.31e-28 113
Msa0982900 MtrunA17_Chr3g0101631 27.483 302 169 8 35 296 36 327 4.54e-28 112
Msa0982900 MtrunA17_Chr3g0086691 28.869 336 192 9 6 297 2 334 5.12e-28 112
Msa0982900 MtrunA17_Chr3g0101801 25.882 340 196 10 6 296 7 339 8.11e-28 112
Msa0982900 MtrunA17_Chr3g0101711 25.369 339 198 12 3 296 7 335 8.51e-28 112
Msa0982900 MtrunA17_Chr3g0086661 29.080 337 190 9 6 297 2 334 9.13e-28 112
Msa0982900 MtrunA17_Chr5g0431671 24.675 308 181 9 31 296 34 332 9.92e-28 112
Msa0982900 MtrunA17_Chr4g0020041 28.947 304 167 9 35 296 37 333 1.29e-27 111
Msa0982900 MtrunA17_Chr1g0174441 23.582 335 206 6 8 297 31 360 2.06e-27 111
Msa0982900 MtrunA17_Chr3g0084921 25.513 341 208 6 1 297 2 340 2.35e-27 111
Msa0982900 MtrunA17_Chr5g0431641 24.561 342 201 11 1 296 1 331 2.93e-27 110
Msa0982900 MtrunA17_Chr4g0047641 26.480 321 191 6 19 294 25 345 4.54e-27 110
Msa0982900 MtrunA17_Chr3g0086651 28.487 337 192 9 6 297 2 334 6.07e-27 110
Msa0982900 MtrunA17_Chr8g0357431 27.302 315 176 9 27 296 27 333 8.31e-27 109
Msa0982900 MtrunA17_Chr3g0101721 26.748 329 185 11 15 296 15 334 1.07e-26 109
Msa0982900 MtrunA17_Chr4g0011901 27.244 312 187 8 24 297 19 328 1.09e-26 108
Msa0982900 MtrunA17_Chr6g0466331 27.193 342 187 11 7 296 1 332 2.32e-26 108
Msa0982900 MtrunA17_Chr5g0445461 24.773 331 188 11 18 296 10 331 2.46e-26 108
Msa0982900 MtrunA17_Chr3g0101811 24.716 352 198 10 6 296 2 347 6.02e-26 107
Msa0982900 MtrunA17_Chr3g0101701 24.629 337 204 10 3 296 7 336 9.08e-26 106
Msa0982900 MtrunA17_Chr6g0465511 26.901 342 188 11 7 296 1 332 1.01e-25 106
Msa0982900 MtrunA17_Chr1g0167321 28.060 335 184 11 6 296 10 331 1.36e-25 105
Msa0982900 MtrunA17_Chr3g0101601 28.276 290 178 7 35 294 36 325 1.57e-25 105
Msa0982900 MtrunA17_Chr8g0361471 26.901 342 188 11 7 296 1 332 2.39e-25 105
Msa0982900 MtrunA17_Chr2g0296661 25.763 295 172 5 47 297 44 335 2.44e-25 105
Msa0982900 MtrunA17_Chr3g0101621 26.936 297 170 7 35 294 33 319 4.56e-25 104
Msa0982900 MtrunA17_Chr1g0207841 25.333 300 176 6 46 298 49 347 6.85e-25 103
Msa0982900 MtrunA17_Chr4g0011881 25.552 317 187 9 24 297 18 328 8.25e-25 103
Msa0982900 MtrunA17_Chr6g0472311 26.744 344 192 11 8 297 11 348 1.02e-24 103
Msa0982900 MtrunA17_Chr4g0030711 24.913 289 170 5 56 298 58 345 1.33e-24 103
Msa0982900 MtrunA17_Chr5g0406651 24.138 319 203 6 17 297 12 329 1.33e-24 103
Msa0982900 MtrunA17_Chr5g0401691 24.390 328 205 6 5 296 24 344 1.87e-24 102
Msa0982900 MtrunA17_Chr4g0011961 24.695 328 202 9 9 296 4 326 2.70e-24 102
Msa0982900 MtrunA17_Chr7g0218601 27.900 319 185 7 24 297 16 334 3.12e-24 102
Msa0982900 MtrunA17_Chr4g0030741 26.168 321 189 6 8 289 38 349 3.95e-24 100
Msa0982900 MtrunA17_Chr5g0445441 23.867 331 191 11 18 296 51 372 4.31e-24 102
Msa0982900 MtrunA17_Chr2g0296651 27.976 336 182 10 7 297 10 330 4.87e-24 101
Msa0982900 MtrunA17_Chr3g0101661 24.925 333 201 10 6 296 10 335 7.22e-24 101
Msa0982900 MtrunA17_Chr3g0101671 25.816 337 191 10 11 296 8 336 8.51e-24 100
Msa0982900 MtrunA17_Chr4g0053621 27.273 308 173 7 35 296 31 333 9.66e-24 100
Msa0982900 MtrunA17_Chr5g0445531 24.675 308 171 9 35 296 38 330 1.44e-23 100
Msa0982900 MtrunA17_Chr1g0176861 51.064 94 44 1 1 94 5 96 2.63e-23 91.7
Msa0982900 MtrunA17_Chr1g0174421 26.335 281 167 7 7 251 22 298 4.97e-23 97.1
Msa0982900 MtrunA17_Chr6g0463801 25.168 298 181 7 35 296 37 328 5.68e-23 98.6
Msa0982900 MtrunA17_Chr4g0024771 25.424 295 184 10 36 296 39 331 7.62e-23 98.2
Msa0982900 MtrunA17_Chr4g0039391 28.136 295 164 8 45 296 45 334 1.53e-22 97.4
Msa0982900 MtrunA17_Chr7g0218611 25.161 310 190 5 28 297 26 333 1.60e-22 97.1
Msa0982900 MtrunA17_Chr3g0101651 26.073 303 179 11 35 296 38 336 2.87e-22 96.7
Msa0982900 MtrunA17_Chr1g0162811 25.225 333 193 11 9 296 11 332 2.92e-22 96.3
Msa0982900 MtrunA17_Chr8g0362481 27.881 269 152 7 70 297 1 268 4.83e-22 95.5
Msa0982900 MtrunA17_Chr1g0156081 26.452 310 179 9 36 296 57 366 1.10e-21 94.7
Msa0982900 MtrunA17_Chr5g0431511 25.246 305 185 6 35 298 33 335 2.05e-21 94.0
Msa0982900 MtrunA17_Chr1g0156101 26.452 310 179 9 36 296 33 342 2.95e-21 93.6
Msa0982900 MtrunA17_Chr4g0046351 27.508 309 168 11 36 298 35 333 1.51e-20 91.7
Msa0982900 MtrunA17_Chr4g0011921 25.152 330 206 7 7 297 1 328 2.12e-20 90.9
Msa0982900 MtrunA17_Chr4g0046331 27.003 337 188 11 10 298 7 333 4.04e-20 90.1
Msa0982900 MtrunA17_Chr5g0419451 26.282 312 191 10 20 297 45 351 8.31e-20 89.4
Msa0982900 MtrunA17_Chr5g0446161 27.108 332 187 13 9 297 14 333 1.06e-19 89.0
Msa0982900 MtrunA17_Chr5g0445751 27.090 299 167 10 1 255 1 292 1.55e-19 87.0
Msa0982900 MtrunA17_Chr5g0431501 26.974 304 179 7 35 297 33 334 5.83e-19 86.7
Msa0982900 MtrunA17_Chr5g0431461 26.974 304 179 7 35 297 33 334 5.83e-19 86.7
Msa0982900 MtrunA17_Chr3g0101741 25.843 267 150 7 70 296 1 259 1.32e-18 85.5
Msa0982900 MtrunA17_Chr4g0046321 26.861 309 168 12 36 297 35 332 1.63e-18 85.5
Msa0982900 MtrunA17_Chr5g0430171 25.991 227 131 2 5 198 7 229 3.53e-18 81.6
Msa0982900 MtrunA17_Chr5g0419691 23.948 309 196 7 27 297 21 328 5.99e-18 84.0
Msa0982900 MtrunA17_Chr1g0156061 27.076 277 152 10 36 296 56 298 7.51e-18 83.6
Msa0982900 MtrunA17_Chr4g0011871 24.841 314 188 7 27 297 21 329 9.42e-18 83.2
Msa0982900 MtrunA17_Chr5g0430051 40.426 94 53 1 9 102 15 105 4.66e-16 72.8
Msa0982900 MtrunA17_Chr8g0351801 23.490 298 183 6 45 297 44 341 1.33e-15 77.0
Msa0982900 MtrunA17_Chr5g0430071 28.477 151 95 3 152 292 36 183 1.51e-15 76.3
Msa0982900 MtrunA17_Chr6g0477081 26.220 164 108 4 136 297 10 162 1.52e-15 74.7
Msa0982900 MtrunA17_Chr7g0246141 39.474 76 46 0 171 246 5 80 3.59e-15 70.5
Msa0982900 MtrunA17_Chr6g0463611 23.509 285 165 9 6 249 19 291 3.86e-15 74.7
Msa0982900 MtrunA17_Chr4g0011861 23.158 285 178 6 27 273 21 302 1.31e-14 72.8
Msa0982900 MtrunA17_Chr2g0310371 36.842 95 58 1 10 102 1 95 1.71e-14 69.7
Msa0982900 MtrunA17_Chr1g0207851 25.185 270 151 9 46 265 49 317 5.00e-14 71.6
Msa0982900 MtrunA17_Chr5g0445541 37.374 99 55 2 6 102 14 107 8.74e-14 67.4
Msa0982900 MtrunA17_Chr4g0011931 22.500 280 180 7 9 253 4 281 5.71e-13 68.2
Msa0982900 MtrunA17_Chr5g0423611 38.462 65 40 0 183 247 4 68 3.74e-11 58.5
Msa0982900 MtrunA17_Chr6g0451761 24.528 265 164 9 12 247 14 271 3.82e-11 62.4
Msa0982900 MtrunA17_Chr3g0117321 42.029 69 40 0 34 102 6 74 4.18e-11 59.7
Msa0982900 MtrunA17_Chr5g0431631 37.179 78 47 1 27 102 42 119 7.05e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0982900 AT2G45550.1 35.207 338 177 5 1 296 1 338 1.74e-64 211
Msa0982900 AT2G45580.3 37.710 297 136 6 45 296 48 340 8.64e-61 199
Msa0982900 AT2G45580.1 37.710 297 136 6 45 296 48 340 1.31e-59 198
Msa0982900 AT2G45560.1 34.650 329 174 5 7 296 12 338 1.49e-59 198
Msa0982900 AT3G61040.2 36.000 300 152 5 34 297 32 327 1.67e-58 192
Msa0982900 AT3G61040.1 36.000 300 152 5 34 297 32 327 4.26e-57 191
Msa0982900 AT1G33720.1 32.229 332 181 6 7 296 9 338 1.49e-56 190
Msa0982900 AT2G45570.1 37.201 293 144 6 44 296 47 339 5.03e-55 186
Msa0982900 AT3G52970.1 33.333 327 174 7 11 294 13 338 1.78e-46 164
Msa0982900 AT3G52970.2 31.965 341 174 7 11 294 13 352 2.23e-44 158
Msa0982900 AT2G45560.2 30.952 294 162 5 7 261 12 303 1.51e-42 149
Msa0982900 AT5G07990.1 30.330 333 186 9 6 297 3 330 1.92e-40 147
Msa0982900 AT2G45580.2 39.153 189 99 4 120 296 2 186 9.44e-40 142
Msa0982900 AT2G45560.3 34.199 231 114 3 7 201 12 240 2.21e-39 138
Msa0982900 AT4G12320.1 31.307 329 182 6 11 298 20 345 3.36e-39 144
Msa0982900 AT4G12300.1 31.003 329 181 7 9 297 20 342 5.38e-38 140
Msa0982900 AT1G33730.1 35.714 196 119 4 107 296 8 202 4.35e-37 135
Msa0982900 AT1G33730.2 35.714 196 119 4 107 296 8 202 4.35e-37 135
Msa0982900 AT3G26300.1 27.052 329 195 7 9 296 4 328 3.59e-35 133
Msa0982900 AT5G06900.1 28.571 329 190 7 9 297 9 332 4.84e-35 132
Msa0982900 AT1G33720.4 33.846 195 124 3 107 296 12 206 1.08e-34 129
Msa0982900 AT1G33720.3 33.846 195 124 3 107 296 12 206 1.08e-34 129
Msa0982900 AT1G33720.5 33.846 195 124 3 107 296 12 206 1.08e-34 129
Msa0982900 AT3G26310.1 27.744 328 188 7 9 296 9 327 1.11e-34 131
Msa0982900 AT5G57260.1 27.273 308 181 5 29 296 24 328 1.65e-34 131
Msa0982900 AT5G44620.1 26.970 330 201 5 8 298 19 347 6.56e-34 129
Msa0982900 AT3G26320.1 27.414 321 185 7 18 296 14 328 6.42e-33 127
Msa0982900 AT3G48270.1 28.767 292 162 8 37 292 33 314 3.94e-32 124
Msa0982900 AT3G48280.1 27.554 323 187 7 7 292 2 314 4.32e-32 124
Msa0982900 AT4G12330.1 27.119 295 170 5 44 297 55 345 1.12e-31 123
Msa0982900 AT5G04330.1 29.373 303 171 10 36 296 33 334 3.55e-31 122
Msa0982900 AT1G33720.2 30.000 220 124 4 107 296 12 231 1.74e-30 119
Msa0982900 AT5G25140.1 25.617 324 193 9 15 296 7 324 1.84e-30 120
Msa0982900 AT4G13770.1 26.994 326 197 8 10 296 4 327 2.38e-30 119
Msa0982900 AT5G25120.1 26.506 332 194 10 6 296 2 324 2.55e-30 119
Msa0982900 AT4G36220.1 28.571 315 152 11 42 297 47 347 1.51e-29 117
Msa0982900 AT5G25180.1 27.726 321 176 10 24 296 12 324 1.91e-29 117
Msa0982900 AT3G26330.1 27.184 309 177 7 30 296 26 328 4.71e-29 116
Msa0982900 AT5G42590.1 28.308 325 192 9 7 294 4 324 5.04e-29 115
Msa0982900 AT2G02580.1 28.182 330 185 8 9 296 9 328 6.10e-29 115
Msa0982900 AT5G24950.1 30.169 295 168 7 35 294 32 323 9.59e-29 115
Msa0982900 AT3G26170.1 28.235 340 180 12 10 296 3 331 1.68e-28 114
Msa0982900 AT1G13110.1 26.946 334 194 8 9 296 4 333 1.84e-28 114
Msa0982900 AT2G40890.1 27.976 336 188 8 6 297 2 327 2.83e-28 114
Msa0982900 AT4G37410.1 26.748 329 193 11 8 296 4 324 3.35e-28 114
Msa0982900 AT2G30770.1 30.333 300 168 9 31 294 29 323 3.66e-28 113
Msa0982900 AT1G11610.1 29.412 306 165 10 29 294 29 323 4.68e-28 113
Msa0982900 AT1G11610.2 29.412 306 165 10 29 294 29 323 5.43e-28 113
Msa0982900 AT5G25130.1 26.606 327 200 7 6 296 2 324 6.76e-28 112
Msa0982900 AT4G12310.1 29.153 295 167 5 44 297 53 346 1.09e-27 112
Msa0982900 AT5G24960.2 27.157 313 180 8 22 294 20 324 1.39e-27 110
Msa0982900 AT3G26180.1 26.462 325 195 7 14 296 9 331 1.42e-27 112
Msa0982900 AT3G48290.1 30.435 299 168 8 26 292 26 316 1.61e-27 111
Msa0982900 AT5G57220.1 26.911 327 191 11 9 296 5 322 1.83e-27 111
Msa0982900 AT4G13310.2 27.070 314 181 9 22 294 19 325 2.77e-27 109
Msa0982900 AT1G01280.1 26.756 299 172 7 44 298 41 336 4.87e-27 110
Msa0982900 AT5G24960.1 27.157 313 180 8 22 294 20 324 5.90e-27 110
Msa0982900 AT4G13310.1 27.070 314 181 9 22 294 19 325 8.82e-27 109
Msa0982900 AT4G13290.1 29.355 310 177 10 22 297 20 321 1.08e-26 109
Msa0982900 AT1G13080.1 29.674 337 183 11 9 298 4 333 2.37e-26 108
Msa0982900 AT3G61035.1 29.365 252 139 9 44 262 51 296 3.43e-26 105
Msa0982900 AT3G48300.1 26.936 297 171 9 37 297 31 317 3.56e-26 107
Msa0982900 AT3G48300.2 26.936 297 171 9 37 297 33 319 3.61e-26 107
Msa0982900 AT3G48310.1 28.477 302 164 8 29 292 28 315 5.05e-26 107
Msa0982900 AT4G37430.1 25.816 337 192 10 7 296 2 327 6.40e-26 107
Msa0982900 AT3G48320.1 26.074 326 191 9 5 292 2 315 1.35e-25 106
Msa0982900 AT3G26290.1 24.522 314 189 6 25 296 21 328 1.64e-25 106
Msa0982900 AT3G26830.1 27.300 337 188 12 6 296 2 327 1.80e-25 105
Msa0982900 AT3G26290.2 24.522 314 189 6 25 296 34 341 2.04e-25 105
Msa0982900 AT4G31500.1 26.006 323 195 6 12 296 10 326 2.68e-25 105
Msa0982900 AT3G26160.1 28.869 336 183 11 6 296 7 331 3.51e-25 105
Msa0982900 AT3G48290.2 28.615 325 166 9 26 292 26 342 4.57e-25 105
Msa0982900 AT5G06905.1 23.795 332 213 5 1 296 1 328 2.53e-24 102
Msa0982900 AT3G26280.2 26.935 323 187 8 18 296 32 349 3.37e-24 102
Msa0982900 AT3G26280.1 26.935 323 187 8 18 296 15 332 3.52e-24 102
Msa0982900 AT2G24180.1 25.987 304 178 7 35 296 36 334 3.93e-24 102
Msa0982900 AT2G30750.1 29.739 306 170 11 28 294 24 323 4.09e-24 102
Msa0982900 AT3G26190.1 25.472 318 188 8 25 298 18 330 5.62e-24 101
Msa0982900 AT4G22690.1 24.055 291 182 5 44 296 93 382 1.59e-23 100
Msa0982900 AT4G20240.2 27.070 314 179 8 22 294 20 324 2.93e-23 99.0
Msa0982900 AT3G26150.1 26.524 328 193 12 10 292 3 327 3.26e-23 99.8
Msa0982900 AT4G20240.1 27.070 314 179 8 22 294 20 324 4.32e-23 99.0
Msa0982900 AT2G23190.1 26.822 343 191 13 1 296 42 371 6.85e-23 99.0
Msa0982900 AT3G26210.1 27.027 296 172 7 42 296 38 330 1.33e-22 97.8
Msa0982900 AT1G13090.2 26.730 318 173 11 28 296 21 327 1.37e-22 97.8
Msa0982900 AT5G67310.1 28.485 330 187 12 7 296 18 338 1.40e-22 97.8
Msa0982900 AT4G22710.1 23.368 291 184 5 44 296 62 351 2.62e-22 97.1
Msa0982900 AT4G37340.1 25.455 330 195 10 10 296 6 327 4.07e-22 96.3
Msa0982900 AT3G26230.1 25.602 332 197 9 7 296 5 328 4.24e-22 96.3
Msa0982900 AT3G44250.1 25.329 304 185 6 34 297 27 328 5.40e-22 95.9
Msa0982900 AT3G26200.1 27.213 305 179 7 34 297 27 329 1.93e-21 94.4
Msa0982900 AT4G37400.1 26.911 327 193 9 8 296 4 322 3.46e-21 93.6
Msa0982900 AT3G26220.1 25.740 338 196 10 7 298 5 333 4.74e-21 93.2
Msa0982900 AT3G26270.1 25.949 316 187 9 24 296 21 332 9.68e-21 92.4
Msa0982900 AT3G53300.1 25.733 307 183 9 34 298 27 330 4.86e-20 90.5
Msa0982900 AT2G42250.1 24.854 342 199 7 5 297 6 338 1.88e-19 88.6
Msa0982900 AT3G20140.1 24.919 309 191 7 27 297 34 339 2.60e-19 88.2
Msa0982900 AT3G53280.1 25.478 314 171 10 34 297 27 327 3.22e-19 87.8
Msa0982900 AT4G37360.1 24.699 332 199 10 8 296 4 327 5.64e-19 87.4
Msa0982900 AT3G28740.1 27.564 312 175 12 27 296 33 335 5.77e-19 87.4
Msa0982900 AT3G20940.1 25.625 320 184 11 24 297 29 340 7.87e-19 87.0
Msa0982900 AT4G37330.1 27.219 338 190 13 1 296 1 324 1.98e-18 85.5
Msa0982900 AT3G20950.1 25.893 336 195 13 1 289 7 335 2.65e-18 85.5
Msa0982900 AT4G31970.1 25.000 344 190 11 15 296 10 347 2.82e-18 85.1
Msa0982900 AT4G37320.1 26.198 313 180 9 28 296 22 327 5.10e-18 84.3
Msa0982900 AT4G37310.1 27.492 331 186 15 9 292 5 328 5.65e-18 84.3
Msa0982900 AT5G42580.1 24.731 279 158 6 55 296 60 323 1.27e-17 83.2
Msa0982900 AT1G50560.1 25.614 285 163 7 56 297 65 343 1.31e-17 83.2
Msa0982900 AT4G37370.1 22.781 338 194 13 6 296 9 326 2.72e-17 82.4
Msa0982900 AT1G50520.1 25.517 290 171 8 44 292 52 337 1.49e-16 80.1
Msa0982900 AT3G32047.1 23.944 284 169 7 55 298 63 339 1.62e-15 77.0
Msa0982900 AT3G26180.2 40.206 97 56 1 14 110 9 103 2.49e-15 75.9
Msa0982900 AT3G20080.2 25.397 315 181 11 24 292 29 335 4.89e-15 75.5
Msa0982900 AT3G20080.1 25.397 315 181 11 24 292 29 335 4.89e-15 75.5
Msa0982900 AT2G14100.1 21.908 283 175 5 55 297 64 340 8.86e-15 74.7
Msa0982900 AT1G13710.1 25.172 290 168 10 37 286 55 335 1.05e-14 74.7
Msa0982900 AT1G13100.1 26.498 317 181 8 27 298 20 329 1.44e-14 74.3
Msa0982900 AT3G20100.1 23.810 336 210 8 5 297 7 339 3.63e-14 73.2
Msa0982900 AT1G13080.2 30.052 193 119 6 117 298 28 215 7.48e-14 71.6
Msa0982900 AT3G20120.4 23.897 272 165 6 56 289 63 330 1.11e-13 71.6
Msa0982900 AT5G47990.1 24.176 273 166 6 56 290 64 333 1.28e-13 71.2
Msa0982900 AT3G61035.2 28.931 159 103 6 114 262 26 184 4.19e-13 68.2
Msa0982900 AT3G61035.4 28.931 159 103 6 114 262 26 184 5.01e-13 67.4
Msa0982900 AT3G61035.3 28.931 159 103 6 114 262 26 184 5.01e-13 67.4
Msa0982900 AT1G13090.1 40.964 83 47 1 28 110 21 101 1.98e-12 67.0
Msa0982900 AT1G66540.2 25.490 153 107 3 145 296 9 155 6.21e-12 65.5
Msa0982900 AT1G66540.1 22.680 194 136 4 111 296 27 214 6.79e-12 65.9
Msa0982900 AT2G27010.1 25.098 255 164 7 56 288 57 306 1.18e-11 65.5
Msa0982900 AT4G15350.1 22.569 288 184 6 47 297 48 333 4.82e-11 63.5

Find 118 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCAAAGACAATGAGTTTA+TGG 0.144155 6_4:-22602139 Msa0982900:CDS
TCCGACCCCAGGAACCTTTC+TGG 0.179925 6_4:+22601620 None:intergenic
TTTATTATTGCCTGTAAGTA+TGG 0.181665 6_4:+22601809 None:intergenic
TTGGCCTTCAACATAGCTTC+TGG 0.239736 6_4:+22601895 None:intergenic
GTCCATAAACTCATTGTCTT+TGG 0.242242 6_4:+22602137 None:intergenic
TTCTAAGCTCCCATACTTAC+AGG 0.262173 6_4:-22601819 Msa0982900:three_prime_UTR
CCGGCTTACAATTGGCTAAT+AGG 0.276581 6_4:-22601535 Msa0982900:three_prime_UTR
ATAGGGAACCTCCTTGAATT+AGG 0.300227 6_4:-22602833 Msa0982900:CDS
TTGGCAGAGATCCCACTATA+TGG 0.302966 6_4:-22601664 Msa0982900:three_prime_UTR
AGTGTTTGATAACAGATTTA+TGG 0.313505 6_4:+22602434 None:intergenic
CCTTCCCCTCTTCCCATCAT+AGG 0.318705 6_4:-22602851 Msa0982900:CDS
GTTCTCCCCAGAAAGGTTCC+TGG 0.327615 6_4:-22601627 Msa0982900:three_prime_UTR
GCCAATCTTGCAAAGATTCA+TGG 0.336324 6_4:-22602788 Msa0982900:CDS
ATCGGTGAAGCAATAGATAT+TGG 0.344441 6_4:-22602477 Msa0982900:CDS
TGGCCTTCAACATAGCTTCT+GGG 0.351632 6_4:+22601896 None:intergenic
GGAAAGAAATCTGCAACATT+TGG 0.353428 6_4:+22602324 None:intergenic
TTCTCCCCAGAAAGGTTCCT+GGG 0.376672 6_4:-22601626 Msa0982900:three_prime_UTR
ACCATGAATCTTTGCAAGAT+TGG 0.381328 6_4:+22602787 None:intergenic
AGACGACAACTGTGGTTATT+CGG 0.387293 6_4:+22602741 None:intergenic
TCTATAATAAGTCTCAAGTT+TGG 0.394622 6_4:-22602764 Msa0982900:CDS
TCATAGGATCTATTTGTTGC+CGG 0.396915 6_4:-22601973 Msa0982900:intron
ACAATGAGAAACATAGAGTT+AGG 0.405833 6_4:+22602956 None:intergenic
ATGGTGCAAGCTCAAAATTC+CGG 0.412300 6_4:+22601582 None:intergenic
AGATGCTGTTGTATCTGTTC+CGG 0.414434 6_4:+22601954 None:intergenic
GTGGATTTGATTCAGTCTAA+TGG 0.419037 6_4:-22602402 Msa0982900:CDS
CCGACCCCAGGAACCTTTCT+GGG 0.422436 6_4:+22601621 None:intergenic
TTCAAGGAGGTTCCCTATGA+TGG 0.422962 6_4:+22602838 None:intergenic
CTTTCTGGGGAGAACAAAGT+TGG 0.423022 6_4:+22601635 None:intergenic
AGGATGCTGCTATTAATGTT+GGG 0.428807 6_4:-22601515 Msa0982900:three_prime_UTR
GGGTCAAGCATCTTCAATAT+AGG 0.433563 6_4:+22602303 None:intergenic
GGCATCTAACATGTCTTTGT+TGG 0.434352 6_4:+22602173 None:intergenic
AGTTGGATTCACCCATATAG+TGG 0.436417 6_4:+22601652 None:intergenic
TAGGATGCTGCTATTAATGT+TGG 0.443742 6_4:-22601516 Msa0982900:three_prime_UTR
TGGTGAAGCAGGAGAGTTCA+AGG 0.452527 6_4:-22602382 Msa0982900:CDS
TGGTTCTGTTAGACAAGAAC+TGG 0.458470 6_4:+22602678 None:intergenic
CTTGGTTAACCAACGTTTGA+AGG 0.461942 6_4:-22602220 Msa0982900:CDS
ATGGTTAATGTGTGGACTAT+TGG 0.463312 6_4:-22601683 Msa0982900:three_prime_UTR
CGCTAGTTAACTCCTTCGAT+TGG 0.467992 6_4:-22601490 Msa0982900:three_prime_UTR
TCCTTCGATTGGAAGCTTGA+AGG 0.469433 6_4:-22601479 None:intergenic
CAACTTTGTTCTCCCCAGAA+AGG 0.469977 6_4:-22601634 Msa0982900:three_prime_UTR
TTCTTCGTTCATTCTTTGCA+AGG 0.472366 6_4:-22602907 Msa0982900:CDS
CTCCTTTGCCATGTCTGTTG+AGG 0.472996 6_4:+22602718 None:intergenic
ACCATCACCTGTGCATCCTT+CGG 0.473122 6_4:+22601701 None:intergenic
TCAACATAGCTTCTGGGTTG+CGG 0.475319 6_4:+22601902 None:intergenic
GTTAGACATCTTTGAAGACT+TGG 0.480136 6_4:-22602238 Msa0982900:CDS
ATTCAGTCTAATGGTGAAGC+AGG 0.481352 6_4:-22602393 Msa0982900:CDS
AAAGAGTTAGAGCAAATGAT+TGG 0.482862 6_4:-22601872 Msa0982900:exon
ATCGATCAAAGCAGTCAAAT+CGG 0.487007 6_4:-22602495 Msa0982900:CDS
AATATGCCCCGGCTTACAAT+TGG 0.487506 6_4:-22601543 Msa0982900:three_prime_UTR
CTATTAGCCAATTGTAAGCC+GGG 0.490935 6_4:+22601536 None:intergenic
CTTCCCCTCTTCCCATCATA+GGG 0.495834 6_4:-22602850 Msa0982900:CDS
AGCAGGAGAGTTCAAGGACT+TGG 0.495886 6_4:-22602376 Msa0982900:CDS
GAGCTTGCACCATTTGGTGC+TGG 0.496128 6_4:-22601572 Msa0982900:three_prime_UTR
TTTGTTGGTGTCTACACCGT+TGG 0.497979 6_4:+22602188 None:intergenic
ATGGGAAGAGGGGAAGGCCC+TGG 0.499830 6_4:+22602857 None:intergenic
CAACCCAGAAGCTATGTTGA+AGG 0.502030 6_4:-22601899 Msa0982900:CDS
TTATTATTGCCTGTAAGTAT+GGG 0.507890 6_4:+22601810 None:intergenic
CGTGGTAGTAAAAGTGGCAC+TGG 0.509189 6_4:+22601764 None:intergenic
AACAGCATCTACCCTCGAAT+GGG 0.514121 6_4:-22601941 Msa0982900:CDS
CCTATTAGCCAATTGTAAGC+CGG 0.515602 6_4:+22601535 None:intergenic
TACGCACATGTGACAGATGT+TGG 0.519612 6_4:+22602103 None:intergenic
CACTATACCGAAGGATGCAC+AGG 0.523168 6_4:-22601708 Msa0982900:three_prime_UTR
GCTCAGTCATTGCCCATTCG+AGG 0.529750 6_4:+22601929 None:intergenic
GAAAACAAGCAAAGAATGTA+CGG 0.530242 6_4:-22602266 Msa0982900:CDS
CCCAGAAAGGTTCCTGGGGT+CGG 0.532261 6_4:-22601621 Msa0982900:three_prime_UTR
GGTTCCCTATGATGGGAAGA+GGG 0.535544 6_4:+22602846 None:intergenic
ACCTTCAAGCTTCCAATCGA+AGG 0.541667 6_4:+22601478 None:intergenic
ATTCGTCGTCCAGCACCAAA+TGG 0.549782 6_4:+22601563 None:intergenic
TGGCAGAGATCCCACTATAT+GGG 0.555294 6_4:-22601663 Msa0982900:three_prime_UTR
ACCGAAGGATGCACAGGTGA+TGG 0.556638 6_4:-22601702 Msa0982900:three_prime_UTR
TCAAGGAGGTTCCCTATGAT+GGG 0.557057 6_4:+22602839 None:intergenic
CTCAGTCATTGCCCATTCGA+GGG 0.557920 6_4:+22601930 None:intergenic
GTAGTAAAAGTGGCACTGGC+GGG 0.558839 6_4:+22601768 None:intergenic
CTCAACAGACATGGCAAAGG+AGG 0.560986 6_4:-22602717 Msa0982900:CDS
TTAACCAACGTTTGAAGGTG+AGG 0.564068 6_4:-22602215 Msa0982900:CDS
CCTATGATGGGAAGAGGGGA+AGG 0.564323 6_4:+22602851 None:intergenic
GAAATATCTGACTCCTCAAG+TGG 0.568364 6_4:+22601839 None:intergenic
CGGATATTGATGTCAAAGGC+CGG 0.572044 6_4:-22601601 Msa0982900:three_prime_UTR
ACTAATATTACAAAACTCGT+TGG 0.573607 6_4:-22602351 Msa0982900:CDS
CTTCCCTCACCTTCAAACGT+TGG 0.575302 6_4:+22602211 None:intergenic
AGGTTCCCTATGATGGGAAG+AGG 0.577551 6_4:+22602845 None:intergenic
CAACAGCATCTACCCTCGAA+TGG 0.579191 6_4:-22601942 Msa0982900:CDS
GGTAGTAAAAGTGGCACTGG+CGG 0.581390 6_4:+22601767 None:intergenic
TAACCAACGTTTGAAGGTGA+GGG 0.581944 6_4:-22602214 Msa0982900:CDS
GTCTTTGGAAATGTTGAGCA+TGG 0.582330 6_4:+22602152 None:intergenic
TGGCTGTGGTGTCCCACTTG+AGG 0.586202 6_4:-22601852 Msa0982900:three_prime_UTR
AATCTTTGCAAGATTGGCCA+AGG 0.586946 6_4:+22602793 None:intergenic
GGGTCGGATATTGATGTCAA+AGG 0.587158 6_4:-22601605 Msa0982900:three_prime_UTR
GTTGGATTCACCCATATAGT+GGG 0.603323 6_4:+22601653 None:intergenic
TTGAGAACCGACACAGATTG+TGG 0.604671 6_4:+22602653 None:intergenic
GTTTGATAACAGATTTATGG+TGG 0.606756 6_4:+22602437 None:intergenic
GGATGCTGCTATTAATGTTG+GGG 0.607833 6_4:-22601514 Msa0982900:three_prime_UTR
TGTCGTCTCCTCAACAGACA+TGG 0.608502 6_4:-22602726 Msa0982900:CDS
CAATAATAAAAGAGACACTT+CGG 0.612139 6_4:-22601796 Msa0982900:three_prime_UTR
GTTCCCTATGATGGGAAGAG+GGG 0.622348 6_4:+22602847 None:intergenic
GGAAGAGGGGAAGGCCCTGG+TGG 0.622608 6_4:+22602860 None:intergenic
TGACATCAATATCCGACCCC+AGG 0.625535 6_4:+22601609 None:intergenic
CTCCTCAACAGACATGGCAA+AGG 0.626340 6_4:-22602720 Msa0982900:CDS
GCTGGACGACGAATATGCCC+CGG 0.628308 6_4:-22601554 Msa0982900:three_prime_UTR
GCTGAGAGGAATGTTGACAT+AGG 0.628736 6_4:-22601737 Msa0982900:three_prime_UTR
ACAAACTATAAGCTTCCACC+AGG 0.631072 6_4:-22602875 Msa0982900:CDS
AACCATTCCACAATCTGTGT+CGG 0.644822 6_4:-22602660 Msa0982900:intron
TTGAAGATGCTTGACCCACA+AGG 0.651193 6_4:-22602297 Msa0982900:CDS
AACCGACACAGATTGTGGAA+TGG 0.652577 6_4:+22602658 None:intergenic
GAGAGGAATGTTGACATAGG+TGG 0.659732 6_4:-22601734 Msa0982900:three_prime_UTR
TTGAAGGTGAGGGAAGCCAA+CGG 0.661277 6_4:-22602204 Msa0982900:CDS
TTAGAGCAAATGATTGGCTG+TGG 0.664470 6_4:-22601866 Msa0982900:exon
TATTAGCCAATTGTAAGCCG+GGG 0.669128 6_4:+22601537 None:intergenic
CGACCCCAGGAACCTTTCTG+GGG 0.670820 6_4:+22601622 None:intergenic
TACTACCACGAAAAGCTGAG+AGG 0.673134 6_4:-22601751 Msa0982900:three_prime_UTR
AAATATCTGACTCCTCAAGT+GGG 0.675585 6_4:+22601840 None:intergenic
CACAGGTGATGGTTAATGTG+TGG 0.678420 6_4:-22601691 Msa0982900:three_prime_UTR
AGGTGGTTACACTATACCGA+AGG 0.680699 6_4:-22601717 Msa0982900:three_prime_UTR
AGCAATAGATATTGGAACAG+CGG 0.685242 6_4:-22602469 Msa0982900:CDS
AGATTGGCCAAGGATTTGTG+AGG 0.687302 6_4:+22602803 None:intergenic
TCTCCCCAGAAAGGTTCCTG+GGG 0.701022 6_4:-22601625 Msa0982900:three_prime_UTR
CAAACTATAAGCTTCCACCA+GGG 0.765132 6_4:-22602874 Msa0982900:CDS
TGTTGAGGAGACGACAACTG+TGG 0.789302 6_4:+22602733 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAGAATTAAATAAAACT+AGG + chr6_4:22602389-22602408 None:intergenic 15.0%
!! TGAAAGAATTAAATAAAACT+AGG + chr6_4:22602389-22602408 None:intergenic 15.0%
!! ACTTAAATTGTTGTGAATTA+TGG - chr6_4:22602448-22602467 Msa0982900:CDS 20.0%
!! ACTTAAATTGTTGTGAATTA+TGG - chr6_4:22602448-22602467 Msa0982900:CDS 20.0%
! TGAACGAAGAAAAACAATTA+TGG + chr6_4:22601529-22601548 None:intergenic 25.0%
! TCTATAATAAGTCTCAAGTT+TGG - chr6_4:22601681-22601700 Msa0982900:three_prime_UTR 25.0%
!! AGTGTTTGATAACAGATTTA+TGG + chr6_4:22602014-22602033 None:intergenic 25.0%
! ACTAATATTACAAAACTCGT+TGG - chr6_4:22602094-22602113 Msa0982900:intron 25.0%
! TTATTATTGCCTGTAAGTAT+GGG + chr6_4:22602638-22602657 None:intergenic 25.0%
! TTTATTATTGCCTGTAAGTA+TGG + chr6_4:22602639-22602658 None:intergenic 25.0%
! CAATAATAAAAGAGACACTT+CGG - chr6_4:22602649-22602668 Msa0982900:intron 25.0%
! TGAACGAAGAAAAACAATTA+TGG + chr6_4:22601529-22601548 None:intergenic 25.0%
! TCTATAATAAGTCTCAAGTT+TGG - chr6_4:22601681-22601700 Msa0982900:three_prime_UTR 25.0%
!! AGTGTTTGATAACAGATTTA+TGG + chr6_4:22602014-22602033 None:intergenic 25.0%
! ACTAATATTACAAAACTCGT+TGG - chr6_4:22602094-22602113 Msa0982900:intron 25.0%
! TTATTATTGCCTGTAAGTAT+GGG + chr6_4:22602638-22602657 None:intergenic 25.0%
! TTTATTATTGCCTGTAAGTA+TGG + chr6_4:22602639-22602658 None:intergenic 25.0%
! CAATAATAAAAGAGACACTT+CGG - chr6_4:22602649-22602668 Msa0982900:intron 25.0%
ACAATGAGAAACATAGAGTT+AGG + chr6_4:22601492-22601511 None:intergenic 30.0%
!!! GTCTTGCTTGTTTTTGAAAT+CGG - chr6_4:22601835-22601854 Msa0982900:three_prime_UTR 30.0%
! GTTTGATAACAGATTTATGG+TGG + chr6_4:22602011-22602030 None:intergenic 30.0%
! ATCAAACACTATTTTCTCAG+TGG - chr6_4:22602024-22602043 Msa0982900:intron 30.0%
GAAAACAAGCAAAGAATGTA+CGG - chr6_4:22602179-22602198 Msa0982900:CDS 30.0%
TTCCAAAGACAATGAGTTTA+TGG - chr6_4:22602306-22602325 Msa0982900:CDS 30.0%
TGTTGTGAATTATGGTTCAT+AGG - chr6_4:22602456-22602475 Msa0982900:CDS 30.0%
! TCATTTGCTCTAACTCTTTT+TGG + chr6_4:22602572-22602591 None:intergenic 30.0%
AAAGAGTTAGAGCAAATGAT+TGG - chr6_4:22602573-22602592 Msa0982900:intron 30.0%
ACAATGAGAAACATAGAGTT+AGG + chr6_4:22601492-22601511 None:intergenic 30.0%
!!! GTCTTGCTTGTTTTTGAAAT+CGG - chr6_4:22601835-22601854 Msa0982900:three_prime_UTR 30.0%
! GTTTGATAACAGATTTATGG+TGG + chr6_4:22602011-22602030 None:intergenic 30.0%
! ATCAAACACTATTTTCTCAG+TGG - chr6_4:22602024-22602043 Msa0982900:intron 30.0%
GAAAACAAGCAAAGAATGTA+CGG - chr6_4:22602179-22602198 Msa0982900:CDS 30.0%
TTCCAAAGACAATGAGTTTA+TGG - chr6_4:22602306-22602325 Msa0982900:CDS 30.0%
TGTTGTGAATTATGGTTCAT+AGG - chr6_4:22602456-22602475 Msa0982900:CDS 30.0%
! TCATTTGCTCTAACTCTTTT+TGG + chr6_4:22602572-22602591 None:intergenic 30.0%
AAAGAGTTAGAGCAAATGAT+TGG - chr6_4:22602573-22602592 Msa0982900:intron 30.0%
TTCTTCGTTCATTCTTTGCA+AGG - chr6_4:22601538-22601557 Msa0982900:three_prime_UTR 35.0%
! GTTTTTCTCCTAATTCAAGG+AGG + chr6_4:22601623-22601642 None:intergenic 35.0%
! GAGGTTTTTCTCCTAATTCA+AGG + chr6_4:22601626-22601645 None:intergenic 35.0%
AGAAAAACCTCACAAATCCT+TGG - chr6_4:22601635-22601654 Msa0982900:three_prime_UTR 35.0%
ACCATGAATCTTTGCAAGAT+TGG + chr6_4:22601661-22601680 None:intergenic 35.0%
ATCGATCAAAGCAGTCAAAT+CGG - chr6_4:22601950-22601969 Msa0982900:CDS 35.0%
ATCGGTGAAGCAATAGATAT+TGG - chr6_4:22601968-22601987 Msa0982900:CDS 35.0%
AGCAATAGATATTGGAACAG+CGG - chr6_4:22601976-22601995 Msa0982900:intron 35.0%
GTGGATTTGATTCAGTCTAA+TGG - chr6_4:22602043-22602062 Msa0982900:intron 35.0%
GGAAAGAAATCTGCAACATT+TGG + chr6_4:22602124-22602143 None:intergenic 35.0%
! GTTTTCTTTTTACGCCTTGT+GGG + chr6_4:22602165-22602184 None:intergenic 35.0%
! TGTTTTCTTTTTACGCCTTG+TGG + chr6_4:22602166-22602185 None:intergenic 35.0%
! GTTAGACATCTTTGAAGACT+TGG - chr6_4:22602207-22602226 Msa0982900:CDS 35.0%
GTCCATAAACTCATTGTCTT+TGG + chr6_4:22602311-22602330 None:intergenic 35.0%
! TCATAGGATCTATTTGTTGC+CGG - chr6_4:22602472-22602491 Msa0982900:CDS 35.0%
AAATATCTGACTCCTCAAGT+GGG + chr6_4:22602608-22602627 None:intergenic 35.0%
! ATGGTTAATGTGTGGACTAT+TGG - chr6_4:22602762-22602781 Msa0982900:CDS 35.0%
! AATTTTGAGCTTGCACCATT+TGG - chr6_4:22602867-22602886 Msa0982900:CDS 35.0%
TAGGATGCTGCTATTAATGT+TGG - chr6_4:22602929-22602948 Msa0982900:CDS 35.0%
AGGATGCTGCTATTAATGTT+GGG - chr6_4:22602930-22602949 Msa0982900:CDS 35.0%
TTCTTCGTTCATTCTTTGCA+AGG - chr6_4:22601538-22601557 Msa0982900:three_prime_UTR 35.0%
! GTTTTTCTCCTAATTCAAGG+AGG + chr6_4:22601623-22601642 None:intergenic 35.0%
! GAGGTTTTTCTCCTAATTCA+AGG + chr6_4:22601626-22601645 None:intergenic 35.0%
AGAAAAACCTCACAAATCCT+TGG - chr6_4:22601635-22601654 Msa0982900:three_prime_UTR 35.0%
ACCATGAATCTTTGCAAGAT+TGG + chr6_4:22601661-22601680 None:intergenic 35.0%
ATCGATCAAAGCAGTCAAAT+CGG - chr6_4:22601950-22601969 Msa0982900:CDS 35.0%
ATCGGTGAAGCAATAGATAT+TGG - chr6_4:22601968-22601987 Msa0982900:CDS 35.0%
AGCAATAGATATTGGAACAG+CGG - chr6_4:22601976-22601995 Msa0982900:intron 35.0%
GTGGATTTGATTCAGTCTAA+TGG - chr6_4:22602043-22602062 Msa0982900:intron 35.0%
GGAAAGAAATCTGCAACATT+TGG + chr6_4:22602124-22602143 None:intergenic 35.0%
! GTTTTCTTTTTACGCCTTGT+GGG + chr6_4:22602165-22602184 None:intergenic 35.0%
! TGTTTTCTTTTTACGCCTTG+TGG + chr6_4:22602166-22602185 None:intergenic 35.0%
! GTTAGACATCTTTGAAGACT+TGG - chr6_4:22602207-22602226 Msa0982900:CDS 35.0%
GTCCATAAACTCATTGTCTT+TGG + chr6_4:22602311-22602330 None:intergenic 35.0%
! TCATAGGATCTATTTGTTGC+CGG - chr6_4:22602472-22602491 Msa0982900:CDS 35.0%
AAATATCTGACTCCTCAAGT+GGG + chr6_4:22602608-22602627 None:intergenic 35.0%
! ATGGTTAATGTGTGGACTAT+TGG - chr6_4:22602762-22602781 Msa0982900:CDS 35.0%
! AATTTTGAGCTTGCACCATT+TGG - chr6_4:22602867-22602886 Msa0982900:CDS 35.0%
TAGGATGCTGCTATTAATGT+TGG - chr6_4:22602929-22602948 Msa0982900:CDS 35.0%
AGGATGCTGCTATTAATGTT+GGG - chr6_4:22602930-22602949 Msa0982900:CDS 35.0%
ACAAACTATAAGCTTCCACC+AGG - chr6_4:22601570-22601589 Msa0982900:three_prime_UTR 40.0%
CAAACTATAAGCTTCCACCA+GGG - chr6_4:22601571-22601590 Msa0982900:three_prime_UTR 40.0%
ATAGGGAACCTCCTTGAATT+AGG - chr6_4:22601612-22601631 Msa0982900:three_prime_UTR 40.0%
! AATCTTTGCAAGATTGGCCA+AGG + chr6_4:22601655-22601674 None:intergenic 40.0%
GCCAATCTTGCAAAGATTCA+TGG - chr6_4:22601657-22601676 Msa0982900:three_prime_UTR 40.0%
AGACGACAACTGTGGTTATT+CGG + chr6_4:22601707-22601726 None:intergenic 40.0%
! TGGTTCTGTTAGACAAGAAC+TGG + chr6_4:22601770-22601789 None:intergenic 40.0%
AACCATTCCACAATCTGTGT+CGG - chr6_4:22601785-22601804 Msa0982900:three_prime_UTR 40.0%
ATTCAGTCTAATGGTGAAGC+AGG - chr6_4:22602052-22602071 Msa0982900:intron 40.0%
GGGTCAAGCATCTTCAATAT+AGG + chr6_4:22602145-22602164 None:intergenic 40.0%
CTTGGTTAACCAACGTTTGA+AGG - chr6_4:22602225-22602244 Msa0982900:CDS 40.0%
TTAACCAACGTTTGAAGGTG+AGG - chr6_4:22602230-22602249 Msa0982900:CDS 40.0%
TAACCAACGTTTGAAGGTGA+GGG - chr6_4:22602231-22602250 Msa0982900:CDS 40.0%
GGCATCTAACATGTCTTTGT+TGG + chr6_4:22602275-22602294 None:intergenic 40.0%
! GTCTTTGGAAATGTTGAGCA+TGG + chr6_4:22602296-22602315 None:intergenic 40.0%
AGATGCTGTTGTATCTGTTC+CGG + chr6_4:22602494-22602513 None:intergenic 40.0%
! TTAGAGCAAATGATTGGCTG+TGG - chr6_4:22602579-22602598 Msa0982900:intron 40.0%
GAAATATCTGACTCCTCAAG+TGG + chr6_4:22602609-22602628 None:intergenic 40.0%
TTCTAAGCTCCCATACTTAC+AGG - chr6_4:22602626-22602645 Msa0982900:intron 40.0%
! GCTTTTCGTGGTAGTAAAAG+TGG + chr6_4:22602690-22602709 None:intergenic 40.0%
GTTGGATTCACCCATATAGT+GGG + chr6_4:22602795-22602814 None:intergenic 40.0%
AGTTGGATTCACCCATATAG+TGG + chr6_4:22602796-22602815 None:intergenic 40.0%
ATGGTGCAAGCTCAAAATTC+CGG + chr6_4:22602866-22602885 None:intergenic 40.0%
TATTAGCCAATTGTAAGCCG+GGG + chr6_4:22602911-22602930 None:intergenic 40.0%
CTATTAGCCAATTGTAAGCC+GGG + chr6_4:22602912-22602931 None:intergenic 40.0%
CCTATTAGCCAATTGTAAGC+CGG + chr6_4:22602913-22602932 None:intergenic 40.0%
GGATGCTGCTATTAATGTTG+GGG - chr6_4:22602931-22602950 Msa0982900:CDS 40.0%
ACAAACTATAAGCTTCCACC+AGG - chr6_4:22601570-22601589 Msa0982900:three_prime_UTR 40.0%
CAAACTATAAGCTTCCACCA+GGG - chr6_4:22601571-22601590 Msa0982900:three_prime_UTR 40.0%
ATAGGGAACCTCCTTGAATT+AGG - chr6_4:22601612-22601631 Msa0982900:three_prime_UTR 40.0%
! AATCTTTGCAAGATTGGCCA+AGG + chr6_4:22601655-22601674 None:intergenic 40.0%
GCCAATCTTGCAAAGATTCA+TGG - chr6_4:22601657-22601676 Msa0982900:three_prime_UTR 40.0%
AGACGACAACTGTGGTTATT+CGG + chr6_4:22601707-22601726 None:intergenic 40.0%
! TGGTTCTGTTAGACAAGAAC+TGG + chr6_4:22601770-22601789 None:intergenic 40.0%
AACCATTCCACAATCTGTGT+CGG - chr6_4:22601785-22601804 Msa0982900:three_prime_UTR 40.0%
ATTCAGTCTAATGGTGAAGC+AGG - chr6_4:22602052-22602071 Msa0982900:intron 40.0%
GGGTCAAGCATCTTCAATAT+AGG + chr6_4:22602145-22602164 None:intergenic 40.0%
CTTGGTTAACCAACGTTTGA+AGG - chr6_4:22602225-22602244 Msa0982900:CDS 40.0%
TTAACCAACGTTTGAAGGTG+AGG - chr6_4:22602230-22602249 Msa0982900:CDS 40.0%
TAACCAACGTTTGAAGGTGA+GGG - chr6_4:22602231-22602250 Msa0982900:CDS 40.0%
GGCATCTAACATGTCTTTGT+TGG + chr6_4:22602275-22602294 None:intergenic 40.0%
! GTCTTTGGAAATGTTGAGCA+TGG + chr6_4:22602296-22602315 None:intergenic 40.0%
AGATGCTGTTGTATCTGTTC+CGG + chr6_4:22602494-22602513 None:intergenic 40.0%
! TTAGAGCAAATGATTGGCTG+TGG - chr6_4:22602579-22602598 Msa0982900:intron 40.0%
GAAATATCTGACTCCTCAAG+TGG + chr6_4:22602609-22602628 None:intergenic 40.0%
TTCTAAGCTCCCATACTTAC+AGG - chr6_4:22602626-22602645 Msa0982900:intron 40.0%
! GCTTTTCGTGGTAGTAAAAG+TGG + chr6_4:22602690-22602709 None:intergenic 40.0%
GTTGGATTCACCCATATAGT+GGG + chr6_4:22602795-22602814 None:intergenic 40.0%
AGTTGGATTCACCCATATAG+TGG + chr6_4:22602796-22602815 None:intergenic 40.0%
ATGGTGCAAGCTCAAAATTC+CGG + chr6_4:22602866-22602885 None:intergenic 40.0%
TATTAGCCAATTGTAAGCCG+GGG + chr6_4:22602911-22602930 None:intergenic 40.0%
CTATTAGCCAATTGTAAGCC+GGG + chr6_4:22602912-22602931 None:intergenic 40.0%
CCTATTAGCCAATTGTAAGC+CGG + chr6_4:22602913-22602932 None:intergenic 40.0%
GGATGCTGCTATTAATGTTG+GGG - chr6_4:22602931-22602950 Msa0982900:CDS 40.0%
TCAAGGAGGTTCCCTATGAT+GGG + chr6_4:22601609-22601628 None:intergenic 45.0%
TTCAAGGAGGTTCCCTATGA+TGG + chr6_4:22601610-22601629 None:intergenic 45.0%
! AGATTGGCCAAGGATTTGTG+AGG + chr6_4:22601645-22601664 None:intergenic 45.0%
AACCGACACAGATTGTGGAA+TGG + chr6_4:22601790-22601809 None:intergenic 45.0%
TTGAGAACCGACACAGATTG+TGG + chr6_4:22601795-22601814 None:intergenic 45.0%
GACACAAGACATAATGCTCG+TGG + chr6_4:22601818-22601837 None:intergenic 45.0%
TTGAAGATGCTTGACCCACA+AGG - chr6_4:22602148-22602167 Msa0982900:CDS 45.0%
! TTTGTTGGTGTCTACACCGT+TGG + chr6_4:22602260-22602279 None:intergenic 45.0%
TACGCACATGTGACAGATGT+TGG + chr6_4:22602345-22602364 None:intergenic 45.0%
AACAGCATCTACCCTCGAAT+GGG - chr6_4:22602504-22602523 Msa0982900:CDS 45.0%
TCAACATAGCTTCTGGGTTG+CGG + chr6_4:22602546-22602565 None:intergenic 45.0%
CAACCCAGAAGCTATGTTGA+AGG - chr6_4:22602546-22602565 Msa0982900:CDS 45.0%
TGGCCTTCAACATAGCTTCT+GGG + chr6_4:22602552-22602571 None:intergenic 45.0%
! TTGGCCTTCAACATAGCTTC+TGG + chr6_4:22602553-22602572 None:intergenic 45.0%
TACTACCACGAAAAGCTGAG+AGG - chr6_4:22602694-22602713 Msa0982900:CDS 45.0%
! ACATTCCTCTCAGCTTTTCG+TGG + chr6_4:22602702-22602721 None:intergenic 45.0%
GCTGAGAGGAATGTTGACAT+AGG - chr6_4:22602708-22602727 Msa0982900:CDS 45.0%
GAGAGGAATGTTGACATAGG+TGG - chr6_4:22602711-22602730 Msa0982900:CDS 45.0%
AGGTGGTTACACTATACCGA+AGG - chr6_4:22602728-22602747 Msa0982900:CDS 45.0%
! CACAGGTGATGGTTAATGTG+TGG - chr6_4:22602754-22602773 Msa0982900:CDS 45.0%
TTGGCAGAGATCCCACTATA+TGG - chr6_4:22602781-22602800 Msa0982900:CDS 45.0%
TGGCAGAGATCCCACTATAT+GGG - chr6_4:22602782-22602801 Msa0982900:CDS 45.0%
! CTTTCTGGGGAGAACAAAGT+TGG + chr6_4:22602813-22602832 None:intergenic 45.0%
CAACTTTGTTCTCCCCAGAA+AGG - chr6_4:22602811-22602830 Msa0982900:CDS 45.0%
GGGTCGGATATTGATGTCAA+AGG - chr6_4:22602840-22602859 Msa0982900:CDS 45.0%
CGGATATTGATGTCAAAGGC+CGG - chr6_4:22602844-22602863 Msa0982900:CDS 45.0%
AATATGCCCCGGCTTACAAT+TGG - chr6_4:22602902-22602921 Msa0982900:CDS 45.0%
CCGGCTTACAATTGGCTAAT+AGG - chr6_4:22602910-22602929 Msa0982900:CDS 45.0%
CGCTAGTTAACTCCTTCGAT+TGG - chr6_4:22602955-22602974 Msa0982900:CDS 45.0%
TCAAGGAGGTTCCCTATGAT+GGG + chr6_4:22601609-22601628 None:intergenic 45.0%
TTCAAGGAGGTTCCCTATGA+TGG + chr6_4:22601610-22601629 None:intergenic 45.0%
! AGATTGGCCAAGGATTTGTG+AGG + chr6_4:22601645-22601664 None:intergenic 45.0%
AACCGACACAGATTGTGGAA+TGG + chr6_4:22601790-22601809 None:intergenic 45.0%
TTGAGAACCGACACAGATTG+TGG + chr6_4:22601795-22601814 None:intergenic 45.0%
GACACAAGACATAATGCTCG+TGG + chr6_4:22601818-22601837 None:intergenic 45.0%
TTGAAGATGCTTGACCCACA+AGG - chr6_4:22602148-22602167 Msa0982900:CDS 45.0%
! TTTGTTGGTGTCTACACCGT+TGG + chr6_4:22602260-22602279 None:intergenic 45.0%
TACGCACATGTGACAGATGT+TGG + chr6_4:22602345-22602364 None:intergenic 45.0%
AACAGCATCTACCCTCGAAT+GGG - chr6_4:22602504-22602523 Msa0982900:CDS 45.0%
TCAACATAGCTTCTGGGTTG+CGG + chr6_4:22602546-22602565 None:intergenic 45.0%
CAACCCAGAAGCTATGTTGA+AGG - chr6_4:22602546-22602565 Msa0982900:CDS 45.0%
TGGCCTTCAACATAGCTTCT+GGG + chr6_4:22602552-22602571 None:intergenic 45.0%
! TTGGCCTTCAACATAGCTTC+TGG + chr6_4:22602553-22602572 None:intergenic 45.0%
TACTACCACGAAAAGCTGAG+AGG - chr6_4:22602694-22602713 Msa0982900:CDS 45.0%
! ACATTCCTCTCAGCTTTTCG+TGG + chr6_4:22602702-22602721 None:intergenic 45.0%
GCTGAGAGGAATGTTGACAT+AGG - chr6_4:22602708-22602727 Msa0982900:CDS 45.0%
GAGAGGAATGTTGACATAGG+TGG - chr6_4:22602711-22602730 Msa0982900:CDS 45.0%
AGGTGGTTACACTATACCGA+AGG - chr6_4:22602728-22602747 Msa0982900:CDS 45.0%
! CACAGGTGATGGTTAATGTG+TGG - chr6_4:22602754-22602773 Msa0982900:CDS 45.0%
TTGGCAGAGATCCCACTATA+TGG - chr6_4:22602781-22602800 Msa0982900:CDS 45.0%
TGGCAGAGATCCCACTATAT+GGG - chr6_4:22602782-22602801 Msa0982900:CDS 45.0%
! CTTTCTGGGGAGAACAAAGT+TGG + chr6_4:22602813-22602832 None:intergenic 45.0%
CAACTTTGTTCTCCCCAGAA+AGG - chr6_4:22602811-22602830 Msa0982900:CDS 45.0%
GGGTCGGATATTGATGTCAA+AGG - chr6_4:22602840-22602859 Msa0982900:CDS 45.0%
CGGATATTGATGTCAAAGGC+CGG - chr6_4:22602844-22602863 Msa0982900:CDS 45.0%
AATATGCCCCGGCTTACAAT+TGG - chr6_4:22602902-22602921 Msa0982900:CDS 45.0%
CCGGCTTACAATTGGCTAAT+AGG - chr6_4:22602910-22602929 Msa0982900:CDS 45.0%
CGCTAGTTAACTCCTTCGAT+TGG - chr6_4:22602955-22602974 Msa0982900:CDS 45.0%
CTTCCCCTCTTCCCATCATA+GGG - chr6_4:22601595-22601614 Msa0982900:three_prime_UTR 50.0%
! GTTCCCTATGATGGGAAGAG+GGG + chr6_4:22601601-22601620 None:intergenic 50.0%
! GGTTCCCTATGATGGGAAGA+GGG + chr6_4:22601602-22601621 None:intergenic 50.0%
! AGGTTCCCTATGATGGGAAG+AGG + chr6_4:22601603-22601622 None:intergenic 50.0%
TGTTGAGGAGACGACAACTG+TGG + chr6_4:22601715-22601734 None:intergenic 50.0%
TGTCGTCTCCTCAACAGACA+TGG - chr6_4:22601719-22601738 Msa0982900:three_prime_UTR 50.0%
CTCCTCAACAGACATGGCAA+AGG - chr6_4:22601725-22601744 Msa0982900:three_prime_UTR 50.0%
CTCCTTTGCCATGTCTGTTG+AGG + chr6_4:22601730-22601749 None:intergenic 50.0%
CTCAACAGACATGGCAAAGG+AGG - chr6_4:22601728-22601747 Msa0982900:three_prime_UTR 50.0%
TGGTGAAGCAGGAGAGTTCA+AGG - chr6_4:22602063-22602082 Msa0982900:intron 50.0%
AGCAGGAGAGTTCAAGGACT+TGG - chr6_4:22602069-22602088 Msa0982900:intron 50.0%
CTTCCCTCACCTTCAAACGT+TGG + chr6_4:22602237-22602256 None:intergenic 50.0%
TTGAAGGTGAGGGAAGCCAA+CGG - chr6_4:22602241-22602260 Msa0982900:CDS 50.0%
CAACAGCATCTACCCTCGAA+TGG - chr6_4:22602503-22602522 Msa0982900:CDS 50.0%
CTCAGTCATTGCCCATTCGA+GGG + chr6_4:22602518-22602537 None:intergenic 50.0%
!! GTAGTAAAAGTGGCACTGGC+GGG + chr6_4:22602680-22602699 None:intergenic 50.0%
! GGTAGTAAAAGTGGCACTGG+CGG + chr6_4:22602681-22602700 None:intergenic 50.0%
CGTGGTAGTAAAAGTGGCAC+TGG + chr6_4:22602684-22602703 None:intergenic 50.0%
CACTATACCGAAGGATGCAC+AGG - chr6_4:22602737-22602756 Msa0982900:CDS 50.0%
ACCATCACCTGTGCATCCTT+CGG + chr6_4:22602747-22602766 None:intergenic 50.0%
TTCTCCCCAGAAAGGTTCCT+GGG - chr6_4:22602819-22602838 Msa0982900:CDS 50.0%
TGACATCAATATCCGACCCC+AGG + chr6_4:22602839-22602858 None:intergenic 50.0%
ATTCGTCGTCCAGCACCAAA+TGG + chr6_4:22602885-22602904 None:intergenic 50.0%
CTTCCCCTCTTCCCATCATA+GGG - chr6_4:22601595-22601614 Msa0982900:three_prime_UTR 50.0%
! GTTCCCTATGATGGGAAGAG+GGG + chr6_4:22601601-22601620 None:intergenic 50.0%
! GGTTCCCTATGATGGGAAGA+GGG + chr6_4:22601602-22601621 None:intergenic 50.0%
! AGGTTCCCTATGATGGGAAG+AGG + chr6_4:22601603-22601622 None:intergenic 50.0%
TGTTGAGGAGACGACAACTG+TGG + chr6_4:22601715-22601734 None:intergenic 50.0%
TGTCGTCTCCTCAACAGACA+TGG - chr6_4:22601719-22601738 Msa0982900:three_prime_UTR 50.0%
CTCCTCAACAGACATGGCAA+AGG - chr6_4:22601725-22601744 Msa0982900:three_prime_UTR 50.0%
CTCCTTTGCCATGTCTGTTG+AGG + chr6_4:22601730-22601749 None:intergenic 50.0%
CTCAACAGACATGGCAAAGG+AGG - chr6_4:22601728-22601747 Msa0982900:three_prime_UTR 50.0%
TGGTGAAGCAGGAGAGTTCA+AGG - chr6_4:22602063-22602082 Msa0982900:intron 50.0%
AGCAGGAGAGTTCAAGGACT+TGG - chr6_4:22602069-22602088 Msa0982900:intron 50.0%
CTTCCCTCACCTTCAAACGT+TGG + chr6_4:22602237-22602256 None:intergenic 50.0%
TTGAAGGTGAGGGAAGCCAA+CGG - chr6_4:22602241-22602260 Msa0982900:CDS 50.0%
CAACAGCATCTACCCTCGAA+TGG - chr6_4:22602503-22602522 Msa0982900:CDS 50.0%
CTCAGTCATTGCCCATTCGA+GGG + chr6_4:22602518-22602537 None:intergenic 50.0%
!! GTAGTAAAAGTGGCACTGGC+GGG + chr6_4:22602680-22602699 None:intergenic 50.0%
! GGTAGTAAAAGTGGCACTGG+CGG + chr6_4:22602681-22602700 None:intergenic 50.0%
CGTGGTAGTAAAAGTGGCAC+TGG + chr6_4:22602684-22602703 None:intergenic 50.0%
CACTATACCGAAGGATGCAC+AGG - chr6_4:22602737-22602756 Msa0982900:CDS 50.0%
ACCATCACCTGTGCATCCTT+CGG + chr6_4:22602747-22602766 None:intergenic 50.0%
TTCTCCCCAGAAAGGTTCCT+GGG - chr6_4:22602819-22602838 Msa0982900:CDS 50.0%
TGACATCAATATCCGACCCC+AGG + chr6_4:22602839-22602858 None:intergenic 50.0%
ATTCGTCGTCCAGCACCAAA+TGG + chr6_4:22602885-22602904 None:intergenic 50.0%
! CCTATGATGGGAAGAGGGGA+AGG + chr6_4:22601597-22601616 None:intergenic 55.0%
CCTTCCCCTCTTCCCATCAT+AGG - chr6_4:22601594-22601613 Msa0982900:three_prime_UTR 55.0%
GCTCAGTCATTGCCCATTCG+AGG + chr6_4:22602519-22602538 None:intergenic 55.0%
ACCGAAGGATGCACAGGTGA+TGG - chr6_4:22602743-22602762 Msa0982900:CDS 55.0%
GTTCTCCCCAGAAAGGTTCC+TGG - chr6_4:22602818-22602837 Msa0982900:CDS 55.0%
TCTCCCCAGAAAGGTTCCTG+GGG - chr6_4:22602820-22602839 Msa0982900:CDS 55.0%
!! GAGCTTGCACCATTTGGTGC+TGG - chr6_4:22602873-22602892 Msa0982900:CDS 55.0%
! CCTATGATGGGAAGAGGGGA+AGG + chr6_4:22601597-22601616 None:intergenic 55.0%
CCTTCCCCTCTTCCCATCAT+AGG - chr6_4:22601594-22601613 Msa0982900:three_prime_UTR 55.0%
GCTCAGTCATTGCCCATTCG+AGG + chr6_4:22602519-22602538 None:intergenic 55.0%
ACCGAAGGATGCACAGGTGA+TGG - chr6_4:22602743-22602762 Msa0982900:CDS 55.0%
GTTCTCCCCAGAAAGGTTCC+TGG - chr6_4:22602818-22602837 Msa0982900:CDS 55.0%
TCTCCCCAGAAAGGTTCCTG+GGG - chr6_4:22602820-22602839 Msa0982900:CDS 55.0%
!! GAGCTTGCACCATTTGGTGC+TGG - chr6_4:22602873-22602892 Msa0982900:CDS 55.0%
TGGCTGTGGTGTCCCACTTG+AGG - chr6_4:22602593-22602612 Msa0982900:intron 60.0%
CGACCCCAGGAACCTTTCTG+GGG + chr6_4:22602826-22602845 None:intergenic 60.0%
CCGACCCCAGGAACCTTTCT+GGG + chr6_4:22602827-22602846 None:intergenic 60.0%
CCCAGAAAGGTTCCTGGGGT+CGG - chr6_4:22602824-22602843 Msa0982900:CDS 60.0%
TCCGACCCCAGGAACCTTTC+TGG + chr6_4:22602828-22602847 None:intergenic 60.0%
GCTGGACGACGAATATGCCC+CGG - chr6_4:22602891-22602910 Msa0982900:CDS 60.0%
TGGCTGTGGTGTCCCACTTG+AGG - chr6_4:22602593-22602612 Msa0982900:intron 60.0%
CGACCCCAGGAACCTTTCTG+GGG + chr6_4:22602826-22602845 None:intergenic 60.0%
CCGACCCCAGGAACCTTTCT+GGG + chr6_4:22602827-22602846 None:intergenic 60.0%
CCCAGAAAGGTTCCTGGGGT+CGG - chr6_4:22602824-22602843 Msa0982900:CDS 60.0%
TCCGACCCCAGGAACCTTTC+TGG + chr6_4:22602828-22602847 None:intergenic 60.0%
GCTGGACGACGAATATGCCC+CGG - chr6_4:22602891-22602910 Msa0982900:CDS 60.0%
ATGGGAAGAGGGGAAGGCCC+TGG + chr6_4:22601591-22601610 None:intergenic 65.0%
ATGGGAAGAGGGGAAGGCCC+TGG + chr6_4:22601591-22601610 None:intergenic 65.0%
GGAAGAGGGGAAGGCCCTGG+TGG + chr6_4:22601588-22601607 None:intergenic 70.0%
GGAAGAGGGGAAGGCCCTGG+TGG + chr6_4:22601588-22601607 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 22601480 22602987 22601480 ID=Msa0982900;Name=Msa0982900
chr6_4 mRNA 22601480 22602987 22601480 ID=Msa0982900-mRNA-1;Parent=Msa0982900;Name=Msa0982900-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.5|0.33|1|1|1|3|405|298
chr6_4 exon 22601480 22601989 22601480 ID=Msa0982900-mRNA-1:exon:7231;Parent=Msa0982900-mRNA-1
chr6_4 exon 22602110 22602574 22602110 ID=Msa0982900-mRNA-1:exon:7230;Parent=Msa0982900-mRNA-1
chr6_4 exon 22602661 22602987 22602661 ID=Msa0982900-mRNA-1:exon:7229;Parent=Msa0982900-mRNA-1
chr6_4 CDS 22602661 22602987 22602661 ID=Msa0982900-mRNA-1:cds;Parent=Msa0982900-mRNA-1
chr6_4 CDS 22602110 22602574 22602110 ID=Msa0982900-mRNA-1:cds;Parent=Msa0982900-mRNA-1
chr6_4 CDS 22601885 22601989 22601885 ID=Msa0982900-mRNA-1:cds;Parent=Msa0982900-mRNA-1
chr6_4 three_prime_UTR 22601480 22601884 22601480 ID=Msa0982900-mRNA-1:three_prime_utr;Parent=Msa0982900-mRNA-1
Gene Sequence

>Msa0982900

ATGGATTTTCCTAACTCTATGTTTCTCATTGTCTTAACATGTGTTACCATAATTGTTTTTCTTCGTTCATTCTTTGCAAGGATCAAAAAAACAAACTATAAGCTTCCACCAGGGCCTTCCCCTCTTCCCATCATAGGGAACCTCCTTGAATTAGGAGAAAAACCTCACAAATCCTTGGCCAATCTTGCAAAGATTCATGGTTCTATAATAAGTCTCAAGTTTGGCCGAATAACCACAGTTGTCGTCTCCTCAACAGACATGGCAAAGGAGGTGCTTCTAATCAATGACCAGTTCTTGTCTAACAGAACCATTCCACAATCTGTGTCGACTCTTGATGCTAGTCAAGACGTTAGACGCAAGAAAATGCAACAGCTTCTCACTGATATCGATCAAAGCAGTCAAATCGGTGAAGCAATAGATATTGGAACAGCGGTGTTCAAGACCACCATAAATCTGTTATCAAACACTATTTTCTCAGTGGATTTGATTCAGTCTAATGGTGAAGCAGGAGAGTTCAAGGACTTGGTGACTAATATTACAAAACTCGTTGGCTCGCCAAATGTTGCAGATTTCTTTCCTATATTGAAGATGCTTGACCCACAAGGCGTAAAAAGAAAACAAGCAAAGAATGTACGGAAAGTGTTAGACATCTTTGAAGACTTGGTTAACCAACGTTTGAAGGTGAGGGAAGCCAACGGTGTAGACACCAACAAAGACATGTTAGATGCCATGCTCAACATTTCCAAAGACAATGAGTTTATGGACAAAAACATGATCCAACATCTGTCACATGATCTATTTGTTGCCGGAACAGATACAACAGCATCTACCCTCGAATGGGCAATGACTGAGCTTATCCGCAACCCAGAAGCTATGTTGAAGGCCAAAAAGAGTTAG

Protein sequence

>Msa0982900

MDFPNSMFLIVLTCVTIIVFLRSFFARIKKTNYKLPPGPSPLPIIGNLLELGEKPHKSLANLAKIHGSIISLKFGRITTVVVSSTDMAKEVLLINDQFLSNRTIPQSVSTLDASQDVRRKKMQQLLTDIDQSSQIGEAIDIGTAVFKTTINLLSNTIFSVDLIQSNGEAGEFKDLVTNITKLVGSPNVADFFPILKMLDPQGVKRKQAKNVRKVLDIFEDLVNQRLKVREANGVDTNKDMLDAMLNISKDNEFMDKNMIQHLSHDLFVAGTDTTASTLEWAMTELIRNPEAMLKAKKS*