AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0353950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0353950 MtrunA17_Chr3g0089281 98.937 1505 15 1 1 1505 1 1504 0.0 3065
Msa0353950 MtrunA17_Chr3g0122961 79.048 1260 190 11 12 1266 3 1193 0.0 2015
Msa0353950 MtrunA17_Chr1g0172461 51.541 1298 519 30 36 1313 7 1214 0.0 1127
Msa0353950 MtrunA17_Chr1g0172461 44.444 108 33 3 1349 1455 1129 1210 6.97e-13 73.9
Msa0353950 MtrunA17_Chr1g0187181 57.313 588 204 12 599 1160 30 596 0.0 614
Msa0353950 MtrunA17_Chr1g0187191 55.319 517 164 14 90 600 1 456 3.29e-160 492
Msa0353950 MtrunA17_Chr8g0356361 68.821 263 77 3 657 917 3 262 1.35e-115 364
Msa0353950 MtrunA17_Chr8g0356341 71.585 183 42 2 217 390 1 182 1.43e-76 251
Msa0353950 MtrunA17_Chr8g0356351 56.140 228 88 7 431 653 37 257 5.25e-69 233
Msa0353950 MtrunA17_Chr8g0356371 35.769 520 141 14 942 1458 1 330 1.93e-60 212
Msa0353950 MtrunA17_Chr3g0122951 73.034 89 22 2 1415 1502 1 88 9.98e-30 114
Msa0353950 MtrunA17_Chr7g0256201 23.946 593 394 19 68 633 114 676 9.62e-28 121
Msa0353950 MtrunA17_Chr8g0356331 53.333 75 35 0 36 110 7 81 8.98e-22 90.9
Msa0353950 MtrunA17_Chr1g0160841 25.120 418 257 17 687 1060 116 521 8.58e-18 89.7
Msa0353950 MtrunA17_Chr1g0172451 30.841 321 77 8 1101 1421 15 190 9.85e-17 80.9
Msa0353950 MtrunA17_Chr2g0293471 36.800 125 49 5 58 181 1 96 2.94e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0353950 AT3G23890.1 59.577 1514 524 20 3 1488 4 1457 0.0 1663
Msa0353950 AT3G23890.2 64.551 1292 411 15 3 1262 4 1280 0.0 1617
Msa0353950 AT5G04130.1 26.190 588 358 23 68 611 120 675 3.43e-24 110
Msa0353950 AT3G10270.2 24.406 631 404 23 68 655 128 728 4.02e-23 107
Msa0353950 AT3G10270.1 24.406 631 404 23 68 655 118 718 4.50e-23 107

Find 364 sgRNAs with CRISPR-Local

Find 611 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCTCAACATTTGCTTTCT+TGG 0.103920 3_1:+24656863 None:intergenic
TGAACGACTTCTGTTGATTT+TGG 0.128096 3_1:-24657502 Msa0353950:CDS
TCTTCCTTTGACCAGGTTTA+AGG 0.177128 3_1:+24658943 None:intergenic
CTCACACCTAATGGTCAATT+TGG 0.185123 3_1:-24658756 Msa0353950:CDS
TCTGCAGATTTACCTTTCTT+TGG 0.188653 3_1:+24657369 None:intergenic
AACAAAGTTAGGTTCATATT+AGG 0.202515 3_1:-24657477 Msa0353950:CDS
AGTCTTGCTAGCACAATTAT+TGG 0.206239 3_1:-24658819 Msa0353950:CDS
GACAATTCTTCAATGGAAAT+TGG 0.217839 3_1:-24656834 Msa0353950:intron
GAACCACTCTTCTTGTTAAA+TGG 0.223741 3_1:+24655877 None:intergenic
CAAGAAGAGTGGTTCTATAT+TGG 0.236410 3_1:-24655869 Msa0353950:CDS
GTAAAAGTTGGCCAATTTAT+TGG 0.236610 3_1:-24658882 Msa0353950:CDS
TTTCTCCAAGTCAGGCTTAA+AGG 0.242444 3_1:+24661980 None:intergenic
ATCCTCAGCAGCAGCCTTCT+TGG 0.256231 3_1:+24656122 None:intergenic
TAAAGTACTCTCTTCCTTCC+TGG 0.257391 3_1:+24659302 None:intergenic
TGGACTTCTCAGCGCATTTC+AGG 0.260035 3_1:+24661808 None:intergenic
ACAAAGTTAGGTTCATATTA+GGG 0.262519 3_1:-24657476 Msa0353950:CDS
ATCCTTGTAGCTTATAAGTT+TGG 0.269362 3_1:+24659037 None:intergenic
CCTTGGCAGGGGATTGGGTT+TGG 0.269993 3_1:+24661788 None:intergenic
AGGGTTTGATTTATTGAAAA+TGG 0.272267 3_1:+24664024 None:intergenic
CTCTGAGGTCTAGCCCTTGC+TGG 0.272327 3_1:+24655742 None:intergenic
AGTTTACGACTCCCATTATA+AGG 0.274947 3_1:-24660343 Msa0353950:CDS
TTAGAACCTGCTCGTCCTTT+TGG 0.275024 3_1:+24656667 None:intergenic
GAAGGTGTTCACAGACAATA+TGG 0.275742 3_1:-24662063 Msa0353950:intron
TAAACTTCATTCATTCATTC+TGG 0.277021 3_1:-24660400 Msa0353950:CDS
AATAATACTAACCCTTATAA+TGG 0.278761 3_1:+24660331 None:intergenic
AGCACAGAAAAGACTTCATT+TGG 0.280694 3_1:-24659267 Msa0353950:CDS
CAAAATATAAAGAAGATTCT+TGG 0.285103 3_1:-24660636 Msa0353950:CDS
ATTTGGGAAAATGAACTTGA+TGG 0.285272 3_1:-24659250 Msa0353950:CDS
GCTTAAAGTTCCATCTTTCA+TGG 0.289319 3_1:-24660369 Msa0353950:CDS
ACAAGAACCAAAGGAATAAT+TGG 0.289506 3_1:+24658368 None:intergenic
ATATGGTCATTTGATGATTA+TGG 0.291285 3_1:-24660571 Msa0353950:CDS
CCATCCTTCAGCATCGATTC+TGG 0.291788 3_1:+24661259 None:intergenic
CTGCAGATTTACCTTTCTTT+GGG 0.298297 3_1:+24657370 None:intergenic
TAGAAGGGTATACTTTGTTC+TGG 0.298691 3_1:+24657757 None:intergenic
CCAAAGGTCCATTCCCTCTA+TGG 0.300236 3_1:-24658973 Msa0353950:CDS
CAATAACGGTGACGGTGTTC+CGG 0.307092 3_1:-24663565 Msa0353950:CDS
CAGACACATAACCAATAAAT+TGG 0.312290 3_1:+24658871 None:intergenic
ATTCACTTTGTTCATTATAT+AGG 0.330383 3_1:+24661435 None:intergenic
AAATTGTTCAGAAGTTAGTT+TGG 0.331359 3_1:-24655410 Msa0353950:three_prime_UTR
TCTCTCCACGCATTATATTC+TGG 0.335727 3_1:+24660128 None:intergenic
ATTTCTCGTGGATTATAGTT+AGG 0.337033 3_1:+24658302 None:intergenic
CGTTCAATCTCCTACGTTCC+CGG 0.337572 3_1:-24663705 Msa0353950:CDS
ACAACTAAACCAGCTAGTTT+TGG 0.337790 3_1:-24661298 Msa0353950:CDS
TTCTTCCCAGCAGGCGGCAC+AGG 0.341442 3_1:+24656312 None:intergenic
ACAAACCTTGGCAGGGGATT+GGG 0.357115 3_1:+24661783 None:intergenic
ATTGAAGAATTGTCATTCTC+TGG 0.362208 3_1:+24656843 None:intergenic
AAAATACCAGTTTGGTTCAA+TGG 0.364262 3_1:+24658503 None:intergenic
GCTTAAAATCTGCCCATGAT+AGG 0.369420 3_1:+24661127 None:intergenic
TTCTCCCTCCCTTCTTAGCC+GGG 0.370277 3_1:+24656070 None:intergenic
AAAGTACTCTCTTCCTTCCT+GGG 0.373110 3_1:+24659303 None:intergenic
TTGTTGTTTGTATAGGGGTT+GGG 0.375272 3_1:-24659337 Msa0353950:intron
ATCAATCTTCTCACACCTAA+TGG 0.375661 3_1:-24658765 Msa0353950:CDS
GTACATACCAATTATTCCTT+TGG 0.377371 3_1:-24658375 Msa0353950:CDS
TTTCTCCCTCCCTTCTTAGC+CGG 0.379174 3_1:+24656069 None:intergenic
ATGAGAGGATCCTTCACATT+AGG 0.380374 3_1:+24658053 None:intergenic
AAGAAGAGTGGTTCTATATT+GGG 0.382861 3_1:-24655868 Msa0353950:CDS
TAATGCGTGGAGAGAAAGAT+TGG 0.390837 3_1:-24660120 Msa0353950:CDS
AACAAACCTTGGCAGGGGAT+TGG 0.391551 3_1:+24661782 None:intergenic
TCTGCAGAGCCACAAGTTGC+AGG 0.394930 3_1:-24657354 Msa0353950:CDS
TATGAATTAGTGAAACTAGA+TGG 0.395888 3_1:-24655575 Msa0353950:three_prime_UTR
GTTCTCATTAGCTTTACATT+TGG 0.398255 3_1:+24662016 None:intergenic
TCTTGAGTCCACTTTCGAAT+AGG 0.401645 3_1:+24658113 None:intergenic
AGAGAAACAAAATACCAGTT+TGG 0.405191 3_1:+24658495 None:intergenic
ATTCCTTTGGTTCTTGTCAA+TGG 0.406535 3_1:-24658362 Msa0353950:CDS
CGTGTCCCAAATTGACCATT+AGG 0.407133 3_1:+24658750 None:intergenic
TCCATTCCCTCTATGGTTGA+TGG 0.408817 3_1:-24658966 Msa0353950:CDS
GTTCTTTCCGCCAGCATCAT+TGG 0.410960 3_1:+24661032 None:intergenic
TAGCTGAGTGTAGATGTATC+TGG 0.415249 3_1:+24658599 None:intergenic
TGATTGCATTACAATGTAGT+TGG 0.415839 3_1:-24655603 Msa0353950:three_prime_UTR
CACTGTGAAGAATCATTTGT+GGG 0.419644 3_1:-24661380 Msa0353950:CDS
ACGGTTTCTGTTTACAATAA+CGG 0.419972 3_1:-24663579 Msa0353950:CDS
TTTAGTTGTCAGTGTCTCCT+TGG 0.421329 3_1:+24661312 None:intergenic
GATCGATCCTGAGGCGAATA+CGG 0.421627 3_1:-24663598 Msa0353950:CDS
CCCCTTCAGTTGTTAGTTCG+AGG 0.425566 3_1:+24658078 None:intergenic
AGATTTACCTTTCTTTGGGA+TGG 0.426068 3_1:+24657374 None:intergenic
GCAGTTTCTGAACACTTTCA+AGG 0.426789 3_1:+24657202 None:intergenic
AATTATGCAGAAATATATAT+TGG 0.427804 3_1:-24657532 Msa0353950:intron
ATAATACTAACCCTTATAAT+GGG 0.428338 3_1:+24660332 None:intergenic
GACTATATAGCCTCCTTCCT+TGG 0.428344 3_1:+24658187 None:intergenic
AAGCTGAAGATAGGAAGAAC+TGG 0.428646 3_1:-24659195 Msa0353950:CDS
AATTGTTCAGAAGTTAGTTT+GGG 0.428703 3_1:-24655409 Msa0353950:three_prime_UTR
GTCAATGGTAGTGAGGGAAT+TGG 0.430118 3_1:-24658347 Msa0353950:CDS
CTATAGCAACAAACCTTGGC+AGG 0.431052 3_1:+24661775 None:intergenic
TCTTCTTGATGAATCTCAAC+CGG 0.431655 3_1:+24663546 None:intergenic
AGAAGGGTATACTTTGTTCT+GGG 0.433508 3_1:+24657758 None:intergenic
TGGGGAACACTGCGAATGCT+TGG 0.433782 3_1:-24660100 Msa0353950:CDS
TCTTCCCAGCAGGCGGCACA+GGG 0.434138 3_1:+24656313 None:intergenic
AATGTAAAGCTAATGAGAAC+TGG 0.435330 3_1:-24662013 Msa0353950:CDS
GAAGGCTGCCCCGGCTAAGA+AGG 0.436545 3_1:-24656079 Msa0353950:CDS
TTGGGCGATAAAGTACTATA+AGG 0.436607 3_1:-24660081 Msa0353950:intron
TTGAGCAATTTGCCTCTCAA+TGG 0.437243 3_1:+24660705 None:intergenic
TCAACCACAGTGACTTTGAT+GGG 0.438553 3_1:+24657130 None:intergenic
TCACACCTAATGGTCAATTT+GGG 0.439064 3_1:-24658755 Msa0353950:CDS
AGAAGAGAAGGTTTATGTTC+CGG 0.441202 3_1:-24663529 Msa0353950:CDS
TGATGACAATTCAGAAGATC+AGG 0.441584 3_1:-24657325 Msa0353950:CDS
CCATAGAGGGAATGGACCTT+TGG 0.442372 3_1:+24658973 None:intergenic
TCAATGGTAGTGAGGGAATT+GGG 0.442517 3_1:-24658346 Msa0353950:CDS
CCCTCAGACAAATCAGCAAT+TGG 0.444165 3_1:+24655820 None:intergenic
GATTTACCTTTCTTTGGGAT+GGG 0.445867 3_1:+24657375 None:intergenic
ATGGCTGGGCTCTCTGTTGT+GGG 0.447250 3_1:-24660750 Msa0353950:CDS
CTGGACATGGCAGGGTGCCT+TGG 0.448230 3_1:-24661903 Msa0353950:CDS
CTCCCACCTATCACCTACTT+TGG 0.450473 3_1:+24661658 None:intergenic
GGTTTACGAAAACGAAGAAA+TGG 0.452666 3_1:-24663733 Msa0353950:CDS
GTGAGGGAATTGGGACAGGT+TGG 0.452955 3_1:-24658337 Msa0353950:CDS
TAGTGGACACCCTCCTATCA+TGG 0.453754 3_1:-24661140 Msa0353950:CDS
CGAAGGAATGTTCGCAGTGG+TGG 0.453915 3_1:+24663860 None:intergenic
GATGGCTGGGCTCTCTGTTG+TGG 0.454662 3_1:-24660751 Msa0353950:CDS
TTGGTATTCTTTCGCGGCTG+TGG 0.454668 3_1:+24656882 None:intergenic
AATGCGTGGAGAGAAAGATT+GGG 0.454873 3_1:-24660119 Msa0353950:CDS
AAGTGATGGGCAGTTTCAAC+AGG 0.456463 3_1:-24661621 Msa0353950:intron
TCTAAGTCTGTCAATGTTGA+AGG 0.456602 3_1:-24657279 Msa0353950:CDS
AAAGGCTGCTGCAGCTAAGA+AGG 0.459445 3_1:-24656172 Msa0353950:CDS
AATTGAACCGACGTAGGTAT+CGG 0.459502 3_1:+24663779 None:intergenic
TTAATCTGTTTCTTCCCAGC+AGG 0.460190 3_1:+24656303 None:intergenic
TTTGATGATTATGGCTGATC+AGG 0.460438 3_1:-24660562 Msa0353950:intron
TAACTCCATTGCTACAATCA+AGG 0.462229 3_1:-24661497 Msa0353950:CDS
GGAGATCCATTGAACCAAAC+TGG 0.462509 3_1:-24658509 Msa0353950:intron
GTGTATAACTTAGAATCATC+TGG 0.464538 3_1:-24656492 Msa0353950:CDS
GCACAGAAAAGACTTCATTT+GGG 0.464737 3_1:-24659266 Msa0353950:CDS
AGATCAGGAAGATGGTGAGC+AGG 0.465355 3_1:-24657310 Msa0353950:CDS
CGCTAGCAATAAGCAGGTAA+TGG 0.465474 3_1:-24660673 Msa0353950:CDS
GTTTACGACTCCCATTATAA+GGG 0.467291 3_1:-24660342 Msa0353950:intron
GAAGAAACAGATTAACAAAA+GGG 0.468180 3_1:-24656295 Msa0353950:CDS
TTCATGATCACGACAAGTAC+CGG 0.470808 3_1:+24659061 None:intergenic
ATATTTCATTTGAGTACGAT+TGG 0.472328 3_1:+24655717 None:intergenic
ATTGAACCGACGTAGGTATC+GGG 0.474030 3_1:+24663780 None:intergenic
CACAATTATTGGAATGGCAC+AGG 0.474378 3_1:-24658808 Msa0353950:CDS
TTTACTCCCATCCCAAAGAA+AGG 0.474736 3_1:-24657381 Msa0353950:CDS
TTCAACCACAGTGACTTTGA+TGG 0.474971 3_1:+24657129 None:intergenic
CTTGAGTACTTGAATGAGGA+TGG 0.475889 3_1:-24658531 Msa0353950:CDS
CTCTCCTACTGCAGAGGATG+AGG 0.478748 3_1:-24655785 Msa0353950:CDS
GTCAAAGATCTTGTAGAGAC+CGG 0.479761 3_1:+24663686 None:intergenic
TCAATTTGGGACACGTAACT+TGG 0.480775 3_1:-24658742 Msa0353950:intron
TCAGAAACTGCTAGATGAAA+AGG 0.482650 3_1:-24657190 Msa0353950:CDS
TTCCCAGCAGGCGGCACAGG+GGG 0.484567 3_1:+24656315 None:intergenic
ATCAAAGTCACTGTGGTTGA+AGG 0.484619 3_1:-24657127 Msa0353950:CDS
GGAAGAAACAGATTAACAAA+AGG 0.484750 3_1:-24656296 Msa0353950:CDS
TTTGTTGAATGATGAGGAAA+TGG 0.485251 3_1:-24658261 Msa0353950:CDS
AAAACTACTGGTGGAAGAAA+CGG 0.487225 3_1:-24663453 Msa0353950:CDS
AGAGAATGACAATTCTTCAA+TGG 0.487772 3_1:-24656841 Msa0353950:CDS
AAATCAACAGAAGTCGTTCA+AGG 0.489152 3_1:+24657505 None:intergenic
GGTCTAGCCCTTGCTGGCTG+TGG 0.489378 3_1:+24655748 None:intergenic
AAGAGCTTATATTGTTCTCA+AGG 0.489743 3_1:-24659004 Msa0353950:CDS
GGGGAACACTGCGAATGCTT+GGG 0.490923 3_1:-24660099 Msa0353950:CDS
GAGGAATGGAAATGAAAGAA+AGG 0.492443 3_1:+24664004 None:intergenic
TATCATCATCAGCATGGAAA+AGG 0.492831 3_1:+24658559 None:intergenic
TTTAAGGCCATCAACCATAG+AGG 0.492954 3_1:+24658959 None:intergenic
CAAAGTGAATAAGAAGAAGA+AGG 0.497535 3_1:-24661422 Msa0353950:CDS
TGATGAGGAAATGGTGCCTA+TGG 0.500375 3_1:-24658252 Msa0353950:CDS
AGAGTTCTATCCACTTCGGC+TGG 0.500635 3_1:-24657654 Msa0353950:CDS
AATGAGTTTGTTGTGAGGAA+TGG 0.501471 3_1:+24663990 None:intergenic
TTGGTTTGAGAATCAAAAGC+AGG 0.502792 3_1:+24661331 None:intergenic
GCTTTCTTGGTATTCTTTCG+CGG 0.503272 3_1:+24656876 None:intergenic
TATATAGGTAGTAATCTGAT+TGG 0.503917 3_1:+24661450 None:intergenic
GTTGCTTGTGCTAATAGTGC+TGG 0.505278 3_1:+24657825 None:intergenic
CACAGTGTGAGCTTTCACAT+TGG 0.506168 3_1:+24661396 None:intergenic
GTTGAAGTTGCAAAACCAAA+AGG 0.506418 3_1:-24656682 Msa0353950:CDS
ACTGTCTGATTCCAACACTA+TGG 0.507161 3_1:+24656248 None:intergenic
GTGAAATTATCGTAAGCAAC+CGG 0.507332 3_1:-24657443 Msa0353950:CDS
GTAGGTAGCAAATCAACATT+GGG 0.507426 3_1:-24655985 Msa0353950:CDS
GTGCCTTGGAAAGACTGTTA+AGG 0.509395 3_1:-24661889 Msa0353950:CDS
CGATAGAATAGAGGCAGAAG+AGG 0.510346 3_1:-24656970 Msa0353950:CDS
AATGTGAAGTCTTTGAGATA+TGG 0.515396 3_1:-24660588 Msa0353950:CDS
ATGGTTGATGGCCTTAAACC+TGG 0.516217 3_1:-24658954 Msa0353950:CDS
GGAGTATTATGAGAAGAGAA+AGG 0.516516 3_1:-24657633 Msa0353950:intron
ACTGTTAAGGTTGAACTCAA+TGG 0.517132 3_1:-24661876 Msa0353950:CDS
GCCATCAACCATAGAGGGAA+TGG 0.517420 3_1:+24658965 None:intergenic
ACAAAGACTCAGAGGCTTCG+TGG 0.517759 3_1:-24661075 Msa0353950:CDS
CGTTACTTTCAACGAATCCA+TGG 0.519419 3_1:+24663620 None:intergenic
CAATCGTGGACATTGAAGTC+AGG 0.519466 3_1:-24657909 Msa0353950:CDS
TGACTTCGAAGTTCAAGAAA+AGG 0.520146 3_1:-24656190 Msa0353950:CDS
AGTTCAAGAGAAGGCTGCCC+CGG 0.521137 3_1:-24656088 Msa0353950:CDS
GTAAACTCAACCATGAAAGA+TGG 0.521781 3_1:+24660359 None:intergenic
CATTTCGAACCAAAACTAGC+TGG 0.522257 3_1:+24661289 None:intergenic
CCAATTGCTGATTTGTCTGA+GGG 0.522514 3_1:-24655820 Msa0353950:CDS
CAGAGCTTCCTATTCGAAAG+TGG 0.522831 3_1:-24658121 Msa0353950:CDS
ACAGAAACCGTATTCGCCTC+AGG 0.523830 3_1:+24663591 None:intergenic
GAAGTCAAATACCATAGTGT+TGG 0.523923 3_1:-24656259 Msa0353950:CDS
AAAAGAATCTTCCTTTGACC+AGG 0.524661 3_1:+24658936 None:intergenic
CATCAGCATGGAAAAGGCTA+CGG 0.524938 3_1:+24658565 None:intergenic
CTTGAGGATGCCAATGATGC+TGG 0.525610 3_1:-24661042 Msa0353950:CDS
CCTCTGAATCCTTTGTACCA+TGG 0.526138 3_1:+24658227 None:intergenic
GGTGACCTTTAAGCCTGACT+TGG 0.527896 3_1:-24661985 Msa0353950:CDS
CTCATACCAAAGTAGGTGAT+AGG 0.528215 3_1:-24661664 Msa0353950:CDS
TCATTAGCCCCTGCAACTTG+TGG 0.528567 3_1:+24657345 None:intergenic
TGTAGGTAGCAAATCAACAT+TGG 0.528845 3_1:-24655986 Msa0353950:CDS
GTTCTTGTCAATGGTAGTGA+GGG 0.530823 3_1:-24658353 Msa0353950:CDS
TGCTGCTCAAAATGCCAAGA+AGG 0.531331 3_1:-24656136 Msa0353950:CDS
TTGATTGAGCTGAAGCAGAA+AGG 0.531606 3_1:-24657405 Msa0353950:CDS
ATCTGTTTCTTCCCAGCAGG+CGG 0.531874 3_1:+24656306 None:intergenic
TCCAATTGCTGATTTGTCTG+AGG 0.532035 3_1:-24655821 Msa0353950:CDS
TCAGGAGCTCGATAGAATAG+AGG 0.533371 3_1:-24656979 Msa0353950:intron
GCTTCTTGAGTACTTGAATG+AGG 0.533615 3_1:-24658535 Msa0353950:CDS
CCCACCCTTGATTGTAGCAA+TGG 0.534126 3_1:+24661492 None:intergenic
TGCTAGCACAATTATTGGAA+TGG 0.534162 3_1:-24658814 Msa0353950:CDS
ATTAGGACTCATACCAAAGT+AGG 0.535495 3_1:-24661671 Msa0353950:intron
TAAAATGACATATCTTGAAG+AGG 0.535603 3_1:-24661955 Msa0353950:CDS
AAAACACACTCAAAATCTCT+GGG 0.536572 3_1:-24663754 Msa0353950:CDS
CAGTTTCTGAACACTTTCAA+GGG 0.537152 3_1:+24657203 None:intergenic
AAGGCTGCCCCGGCTAAGAA+GGG 0.538816 3_1:-24656078 Msa0353950:CDS
GAGATTGAAGAAGTATAAGC+AGG 0.540089 3_1:-24663367 Msa0353950:intron
CAAAGACTCAGAGGCTTCGT+GGG 0.540270 3_1:-24661074 Msa0353950:CDS
TTGTCCAAAGAAGTAAAAGT+TGG 0.540957 3_1:-24658894 Msa0353950:CDS
TTGCAGCCAGCTGAAAGTAT+AGG 0.541899 3_1:-24655940 Msa0353950:CDS
TGTTCGCAGTGGTGGACGGT+TGG 0.542925 3_1:+24663868 None:intergenic
TGCCAAGAAGGCTGCTGCTG+AGG 0.542968 3_1:-24656124 Msa0353950:CDS
TTGAAGAGTTCTATCCACTT+CGG 0.544068 3_1:-24657658 Msa0353950:CDS
CTGCAGAGCCACAAGTTGCA+GGG 0.544259 3_1:-24657353 Msa0353950:CDS
TATAGTCAATGGCTCGGTGG+AGG 0.544758 3_1:-24658171 Msa0353950:CDS
GAAGGAGGCTATATAGTCAA+TGG 0.544884 3_1:-24658182 Msa0353950:CDS
CCTTTGTACCATGGATCCAT+AGG 0.544960 3_1:+24658236 None:intergenic
GCTTTACATTTGGTTATCAG+TGG 0.545432 3_1:+24662026 None:intergenic
ACACTGTGAAGAATCATTTG+TGG 0.546396 3_1:-24661381 Msa0353950:CDS
AAGTACTCTCTTCCTTCCTG+GGG 0.546831 3_1:+24659304 None:intergenic
ATTGGGCAAAGCTGCTAACA+TGG 0.548036 3_1:-24655851 Msa0353950:CDS
TTGAGTACTTGAATGAGGAT+GGG 0.549108 3_1:-24658530 Msa0353950:CDS
TTTGTTATTGAAACTGCTGA+TGG 0.549360 3_1:-24663393 Msa0353950:CDS
TGAGATTCATCAAGAAGAGA+AGG 0.552979 3_1:-24663541 Msa0353950:CDS
TTCCTCGAACTAACAACTGA+AGG 0.553123 3_1:-24658080 Msa0353950:CDS
AATTCAGAAGATCAGGAAGA+TGG 0.553767 3_1:-24657318 Msa0353950:CDS
GCAAAACCAAAAGGACGAGC+AGG 0.554847 3_1:-24656673 Msa0353950:CDS
AACTCCATTGCTACAATCAA+GGG 0.554991 3_1:-24661496 Msa0353950:CDS
AGCAAGGGCTAGACCTCAGA+GGG 0.555530 3_1:-24655740 Msa0353950:CDS
TATGGTGTGTTTCCATTGAG+AGG 0.556542 3_1:-24660717 Msa0353950:CDS
CAACCTTAACAGTCTTTCCA+AGG 0.556617 3_1:+24661886 None:intergenic
TAAAATCTGCCCATGATAGG+AGG 0.557713 3_1:+24661130 None:intergenic
CAGTGGTGGACGGTTGGAGA+GGG 0.557734 3_1:+24663874 None:intergenic
AGGCAAATTGCTCAATGTGC+GGG 0.558322 3_1:-24660697 Msa0353950:CDS
AAAGATTTGAAGAAAACTGA+TGG 0.558744 3_1:-24661099 Msa0353950:CDS
TCATAATACTCCAGCCGAAG+TGG 0.559292 3_1:+24657644 None:intergenic
ATAACTTACAGCAAGAGCCT+TGG 0.561399 3_1:+24660969 None:intergenic
GGTAGTGAGGGAATTGGGAC+AGG 0.561795 3_1:-24658341 Msa0353950:CDS
CAAAGTTAGGTTCATATTAG+GGG 0.562059 3_1:-24657475 Msa0353950:CDS
GATGTACCTATACTTTCAGC+TGG 0.563365 3_1:+24655934 None:intergenic
CTGCTGCAGCTAAGAAGGGT+GGG 0.564155 3_1:-24656167 Msa0353950:CDS
ATTCTAAGTTATACACAGCT+AGG 0.564822 3_1:+24656499 None:intergenic
AGGAATGGAAATGAAAGAAA+GGG 0.566676 3_1:+24664005 None:intergenic
GTATTCTTTCGCGGCTGTGG+TGG 0.567962 3_1:+24656885 None:intergenic
GGACATTGAAGTCAGGATGA+AGG 0.568835 3_1:-24657902 Msa0353950:CDS
ATCAGCATGGAAAAGGCTAC+GGG 0.570078 3_1:+24658566 None:intergenic
CGGAGGTAGTGTCGTCGTAG+AGG 0.570179 3_1:+24663919 None:intergenic
GTTGTGGGTCGAGACCACTA+TGG 0.571250 3_1:-24660735 Msa0353950:CDS
CAACAGAAGTCGTTCAAGGT+TGG 0.571865 3_1:+24657509 None:intergenic
ACTTTCAACGAATCCATGGA+TGG 0.572336 3_1:+24663624 None:intergenic
GATGGAACTTTAAGCAGTGA+TGG 0.573604 3_1:+24660377 None:intergenic
TTCTAAGAAGAATGCTCAGA+AGG 0.574213 3_1:-24656650 Msa0353950:intron
ACATTGGCAATAATTTCTCG+TGG 0.574443 3_1:+24658290 None:intergenic
TCGTGGGATTGTAAAGCTTG+AGG 0.574719 3_1:-24661058 Msa0353950:CDS
ACTGGTGGAAGAAACGGTTA+TGG 0.575935 3_1:-24663447 Msa0353950:CDS
AAGCGTGTGCTGGACATGGC+AGG 0.576604 3_1:-24661912 Msa0353950:CDS
AAGGTGTTCACAGACAATAT+GGG 0.576914 3_1:-24662062 Msa0353950:CDS
TCCTCGAACTAACAACTGAA+GGG 0.579064 3_1:-24658079 Msa0353950:CDS
AAATGGTGCCTATGGATCCA+TGG 0.579152 3_1:-24658244 Msa0353950:CDS
GATAATGTGAAGAAAACTAC+TGG 0.579693 3_1:-24663465 Msa0353950:CDS
CTGCCCCGGCTAAGAAGGGA+GGG 0.580840 3_1:-24656074 Msa0353950:CDS
CATGATGGCTCTCACATCAA+AGG 0.580915 3_1:-24660431 Msa0353950:CDS
AGATTGCACCACAGCCAGCA+AGG 0.581008 3_1:-24655756 Msa0353950:CDS
TGAGTTTGAAGTTCAAGAGA+AGG 0.581243 3_1:-24656097 Msa0353950:CDS
GTTGGGTACAAGTACTCCCC+AGG 0.582231 3_1:-24659320 Msa0353950:CDS
GCTGCCCCGGCTAAGAAGGG+AGG 0.582526 3_1:-24656075 Msa0353950:CDS
AGCCAAACTTATAAGCTACA+AGG 0.583262 3_1:-24659039 Msa0353950:CDS
GCTCCCAAGAAAAGAAATGT+AGG 0.583553 3_1:-24656003 Msa0353950:CDS
ATTCAACAAACGTCGAACAT+TGG 0.585116 3_1:+24658274 None:intergenic
TCTGTTTACAATAACGGTGA+CGG 0.585410 3_1:-24663573 Msa0353950:CDS
GGTTCTTGTCAATGGTAGTG+AGG 0.585975 3_1:-24658354 Msa0353950:CDS
AGTGGACACCCTCCTATCAT+GGG 0.586131 3_1:-24661139 Msa0353950:CDS
CTTCCCAGCAGGCGGCACAG+GGG 0.586706 3_1:+24656314 None:intergenic
ATTGAGAAAAGCGCCAAGGA+AGG 0.587823 3_1:-24658200 Msa0353950:CDS
GCAGTGGTGGACGGTTGGAG+AGG 0.590368 3_1:+24663873 None:intergenic
AGAGCTTATATTGTTCTCAA+GGG 0.590415 3_1:-24659003 Msa0353950:CDS
TGGTTTGAGAATCAAAAGCA+GGG 0.591268 3_1:+24661332 None:intergenic
GTCAGGCTTAAAGGTCACCT+TGG 0.593469 3_1:+24661989 None:intergenic
CTTGTAGAGACCGGGAACGT+AGG 0.594214 3_1:+24663695 None:intergenic
GAGAAAAGCGCCAAGGAAGG+AGG 0.595142 3_1:-24658197 Msa0353950:CDS
TACCAAAGTAGGTGATAGGT+GGG 0.596162 3_1:-24661660 Msa0353950:CDS
TATAGCAACAAACCTTGGCA+GGG 0.596252 3_1:+24661776 None:intergenic
ATGGCCTTAAACCTGGTCAA+AGG 0.596261 3_1:-24658947 Msa0353950:CDS
TCCTACTGCAGAGGATGAGG+TGG 0.596512 3_1:-24655782 Msa0353950:CDS
TCAATGTTGAAGGAGCAACA+TGG 0.598716 3_1:-24657269 Msa0353950:CDS
TTTGCGTGAGTCTAAGTGAT+GGG 0.599274 3_1:-24661634 Msa0353950:CDS
TGATGGAAATGCAATTGAGC+TGG 0.599549 3_1:-24659233 Msa0353950:CDS
GGAATGTTCGCAGTGGTGGA+CGG 0.600248 3_1:+24663864 None:intergenic
TCCATTGCTACAATCAAGGG+TGG 0.600937 3_1:-24661493 Msa0353950:CDS
TCAAAGATCTTGTAGAGACC+GGG 0.601160 3_1:+24663687 None:intergenic
GCGGGACGCTAGCAATAAGC+AGG 0.603825 3_1:-24660679 Msa0353950:CDS
TCATGATCACGACAAGTACC+GGG 0.604272 3_1:+24659062 None:intergenic
CAACCACAGTGACTTTGATG+GGG 0.604822 3_1:+24657131 None:intergenic
GAAGCTTATCATCATCAGCA+TGG 0.605240 3_1:+24658553 None:intergenic
CAATGTTGAAGGAGCAACAT+GGG 0.605278 3_1:-24657268 Msa0353950:CDS
TGTACTTTGATATTGACAGA+GGG 0.605346 3_1:-24661000 Msa0353950:CDS
CCTATGGATCCATGGTACAA+AGG 0.605575 3_1:-24658236 Msa0353950:CDS
CCATGGTACAAAGGATTCAG+AGG 0.605752 3_1:-24658227 Msa0353950:CDS
CCAGAATCGATGCTGAAGGA+TGG 0.606568 3_1:-24661259 Msa0353950:intron
AAGGCTGCTGCAGCTAAGAA+GGG 0.608387 3_1:-24656171 Msa0353950:CDS
GCTAGATGAAAAGGCCGACA+AGG 0.608832 3_1:-24657181 Msa0353950:CDS
CCAAACCCAATCCCCTGCCA+AGG 0.608935 3_1:-24661788 Msa0353950:intron
TCGACGTTTGTTGAATGATG+AGG 0.613348 3_1:-24658267 Msa0353950:CDS
GAAGGGTATACTTTGTTCTG+GGG 0.614348 3_1:+24657759 None:intergenic
TTCATATTAGGGGTTGTGAG+TGG 0.614828 3_1:-24657465 Msa0353950:CDS
TGAAGGGGCGCCTAATGTGA+AGG 0.614828 3_1:-24658063 Msa0353950:CDS
GGTCGTATTACTTCAATGAG+AGG 0.616337 3_1:+24658038 None:intergenic
ATAGCAACAAACCTTGGCAG+GGG 0.617548 3_1:+24661777 None:intergenic
TCAATGGAAACACACCATAG+TGG 0.617599 3_1:+24660721 None:intergenic
TCTCAAGGGCAGATCTCCAA+AGG 0.618467 3_1:-24658989 Msa0353950:CDS
ATACCAAAGTAGGTGATAGG+TGG 0.619723 3_1:-24661661 Msa0353950:CDS
CTACCATTGACAAGAACCAA+AGG 0.621848 3_1:+24658359 None:intergenic
TTATTGAAACTGCTGATGGA+CGG 0.623516 3_1:-24663389 Msa0353950:CDS
TGTGTGATTTAGGATCATGA+TGG 0.623849 3_1:-24660446 Msa0353950:intron
TGAGTACGATTGGCCCTCTG+AGG 0.624355 3_1:+24655727 None:intergenic
GCTGCTGCAGCTAAGAAGGG+TGG 0.625882 3_1:-24656168 Msa0353950:CDS
TTCTAACTCTCCTACTGCAG+AGG 0.626969 3_1:-24655791 Msa0353950:CDS
AAAATCTGCCCATGATAGGA+GGG 0.627397 3_1:+24661131 None:intergenic
TCACCATTTAACAAGAAGAG+TGG 0.627403 3_1:-24655880 Msa0353950:CDS
GTAGCTGCAATAATGCAAGA+AGG 0.629892 3_1:-24657871 Msa0353950:CDS
AGGCTATATAGTCAATGGCT+CGG 0.630075 3_1:-24658177 Msa0353950:CDS
GAAAGTAACGATCGATCCTG+AGG 0.631471 3_1:-24663607 Msa0353950:CDS
TTAAGGCCATCAACCATAGA+GGG 0.631553 3_1:+24658960 None:intergenic
TCTCCCTCCCTTCTTAGCCG+GGG 0.632929 3_1:+24656071 None:intergenic
TGCAGAGCCACAAGTTGCAG+GGG 0.634306 3_1:-24657352 Msa0353950:CDS
CAGCAAGGGCTAGACCTCAG+AGG 0.635733 3_1:-24655741 Msa0353950:CDS
ATTTGCGTGAGTCTAAGTGA+TGG 0.637324 3_1:-24661635 Msa0353950:CDS
AGCGTGTGCTGGACATGGCA+GGG 0.637743 3_1:-24661911 Msa0353950:CDS
GATAGAATAGAGGCAGAAGA+GGG 0.638951 3_1:-24656969 Msa0353950:CDS
AAATGGGGATGATGCAATCG+TGG 0.642797 3_1:-24657923 Msa0353950:CDS
GAGGCAAATTGCTCAATGTG+CGG 0.643831 3_1:-24660698 Msa0353950:CDS
ACCACCTCATCCTCTGCAGT+AGG 0.647494 3_1:+24655781 None:intergenic
TGACAATGAGTCAGATGATG+AGG 0.648033 3_1:-24655674 Msa0353950:CDS
AGGTGTTCACAGACAATATG+GGG 0.648714 3_1:-24662061 Msa0353950:CDS
AACCATTGAGAAAAGCGCCA+AGG 0.648758 3_1:-24658204 Msa0353950:CDS
GATTGCACCACAGCCAGCAA+GGG 0.648965 3_1:-24655755 Msa0353950:CDS
TACCTCCGTGTCAACCACCA+TGG 0.651299 3_1:-24663904 Msa0353950:exon
ATGCGTGGAGAGAAAGATTG+GGG 0.652352 3_1:-24660118 Msa0353950:CDS
GGTACAAGTACTCCCCAGGA+AGG 0.652365 3_1:-24659316 Msa0353950:CDS
GAGCATTCTGCTTATCACCA+TGG 0.653487 3_1:-24658849 Msa0353950:CDS
AGATGTATCTGGAACTTGCA+TGG 0.654827 3_1:+24658610 None:intergenic
CAAACAGCGAGATCCATCCA+TGG 0.655200 3_1:-24663637 Msa0353950:CDS
CTATATAGTCAATGGCTCGG+TGG 0.656948 3_1:-24658174 Msa0353950:CDS
AGATGACCGAAAATCAACTC+CGG 0.658981 3_1:+24663510 None:intergenic
CCATTGCTACAATCAAGGGT+GGG 0.659269 3_1:-24661492 Msa0353950:CDS
CGGGAACGTAGGAGATTGAA+CGG 0.660792 3_1:+24663706 None:intergenic
AAACAGATTAACAAAAGGGG+TGG 0.661324 3_1:-24656291 Msa0353950:CDS
TAGCAAGACTTTGTTCACCA+TGG 0.661618 3_1:+24658832 None:intergenic
CTATGCCAGAATATAATGCG+TGG 0.662233 3_1:-24660133 Msa0353950:CDS
GTGTACTTTGATATTGACAG+AGG 0.662491 3_1:-24661001 Msa0353950:CDS
GGTCAAAGTACCAATAGACA+AGG 0.664047 3_1:+24657224 None:intergenic
AGCTAATGAGAACTGGACCA+AGG 0.665322 3_1:-24662006 Msa0353950:CDS
AATGTGAAGAAAACTACTGG+TGG 0.666132 3_1:-24663462 Msa0353950:CDS
CCTCGAACTAACAACTGAAG+GGG 0.666417 3_1:-24658078 Msa0353950:CDS
CGACGTAGGTATCGGGACGG+AGG 0.666680 3_1:+24663787 None:intergenic
CTCCGTCCCGATACCTACGT+CGG 0.670608 3_1:-24663786 Msa0353950:CDS
TTCCATGGTGGTTGACACGG+AGG 0.673361 3_1:+24663902 None:intergenic
TTTCGAAGGAATGTTCGCAG+TGG 0.674243 3_1:+24663857 None:intergenic
AAATGGAAGAAAGAATCTAA+CGG 0.675211 3_1:+24664041 None:intergenic
GACAGAGGGAGATTCTGCCA+AGG 0.677275 3_1:-24660986 Msa0353950:CDS
TGAGAAATGAGTTTGTTGTG+AGG 0.678434 3_1:+24663985 None:intergenic
AAGAAACAGATTAACAAAAG+GGG 0.679932 3_1:-24656294 Msa0353950:CDS
AACCGACGTAGGTATCGGGA+CGG 0.681489 3_1:+24663784 None:intergenic
CTGATGGAACAAAGACTCAG+AGG 0.687016 3_1:-24661083 Msa0353950:CDS
TGTTCCAGAATCGATGCTGA+AGG 0.691007 3_1:-24661263 Msa0353950:CDS
TCATCTGGTGAAAAGTCACA+AGG 0.700634 3_1:-24656477 Msa0353950:intron
GAGGATGCCAATGATGCTGG+CGG 0.710981 3_1:-24661039 Msa0353950:CDS
AATGTTGAAGGAGCAACATG+GGG 0.741330 3_1:-24657267 Msa0353950:CDS
GAATTAGTGAAACTAGATGG+TGG 0.761344 3_1:-24655572 Msa0353950:three_prime_UTR
GAACCCCATCAAAGTCACTG+TGG 0.763480 3_1:-24657134 Msa0353950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTGGAATTTTAATTTT+TGG - chr3_1:24656476-24656495 Msa0353950:intron 10.0%
!!! TTTACTTTTTAATAAATGTT+TGG - chr3_1:24656662-24656681 Msa0353950:CDS 10.0%
!! GAAAAAAAAAAATTTAATAC+AGG + chr3_1:24662849-24662868 None:intergenic 10.0%
!!! AAGGTAAATTTTATTTTTTT+GGG - chr3_1:24662990-24663009 Msa0353950:intron 10.0%
!!! GAGTTTTTATTTGAATTTTT+TGG - chr3_1:24656189-24656208 Msa0353950:CDS 15.0%
!!! ATATTGAATTTGTTGATTTA+GGG - chr3_1:24656262-24656281 Msa0353950:CDS 15.0%
!!! TAAAAGTATTTTTCAAAGTT+TGG - chr3_1:24658529-24658548 Msa0353950:CDS 15.0%
!! TTTATAGGTGTAAAAATATA+TGG + chr3_1:24659419-24659438 None:intergenic 15.0%
!! TATAAGAGCAAAATTTAATT+TGG + chr3_1:24660061-24660080 None:intergenic 15.0%
!! AAAAAAAAAAAAAACTATGC+CGG + chr3_1:24660741-24660760 None:intergenic 15.0%
!! CATAAATTTACATATGAATA+AGG + chr3_1:24661475-24661494 None:intergenic 15.0%
!! ATTTCAGTTCATATATTAAT+CGG + chr3_1:24661885-24661904 None:intergenic 15.0%
!! AATTATGCAGAAATATATAT+TGG - chr3_1:24661916-24661935 Msa0353950:CDS 15.0%
!! ATTAAATTATAAAACAACTC+AGG + chr3_1:24662644-24662663 None:intergenic 15.0%
!!! CAAGGTAAATTTTATTTTTT+TGG - chr3_1:24662989-24663008 Msa0353950:intron 15.0%
!!! TTGTTGATTTGTTAATCTAT+AGG - chr3_1:24656151-24656170 Msa0353950:CDS 20.0%
!!! TTTTGGTTTAAAATCTTGTT+AGG - chr3_1:24656206-24656225 Msa0353950:CDS 20.0%
!!! TTTGGTTTAAAATCTTGTTA+GGG - chr3_1:24656207-24656226 Msa0353950:CDS 20.0%
!!! GATATTGAATTTGTTGATTT+AGG - chr3_1:24656261-24656280 Msa0353950:CDS 20.0%
!!! GATTTTGAATTTGTTGATTT+AGG - chr3_1:24656516-24656535 Msa0353950:CDS 20.0%
!!! GAATTTTCTGTTTTAAAATC+AGG - chr3_1:24656894-24656913 Msa0353950:CDS 20.0%
!!! TAATGAACTTAAGTTTTTGT+CGG - chr3_1:24656938-24656957 Msa0353950:CDS 20.0%
!! AAAGTTAGGTATATTAATTG+TGG - chr3_1:24657040-24657059 Msa0353950:intron 20.0%
!! AAGTTAGGTATATTAATTGT+GGG - chr3_1:24657041-24657060 Msa0353950:intron 20.0%
!! TTCAAAATATAAACTGTAAC+AGG + chr3_1:24657075-24657094 None:intergenic 20.0%
!!! TGTTACAGTTTATATTTTGA+AGG - chr3_1:24657074-24657093 Msa0353950:intron 20.0%
!!! TTTTTCTTTCATTTGATGAA+TGG - chr3_1:24657303-24657322 Msa0353950:CDS 20.0%
!!! GTTAAATTTTTGTGTTATGA+AGG - chr3_1:24657367-24657386 Msa0353950:CDS 20.0%
!! ATTCACTTTGTTCATTATAT+AGG + chr3_1:24658016-24658035 None:intergenic 20.0%
!! TTTATTCTTTGTACAATAGT+AGG + chr3_1:24658638-24658657 None:intergenic 20.0%
!!! CATATTTTTTTTCATGAAGA+TGG - chr3_1:24658679-24658698 Msa0353950:intron 20.0%
!! CAAAATATAAAGAAGATTCT+TGG - chr3_1:24658812-24658831 Msa0353950:CDS 20.0%
!! ATAATACTAACCCTTATAAT+GGG + chr3_1:24659119-24659138 None:intergenic 20.0%
!! AATAATACTAACCCTTATAA+TGG + chr3_1:24659120-24659139 None:intergenic 20.0%
!!! ATAGTGGTTTATACTTTTAT+AGG + chr3_1:24659434-24659453 None:intergenic 20.0%
!!! TAAAAGTATAAACCACTATA+CGG - chr3_1:24659435-24659454 Msa0353950:intron 20.0%
!! ATATGTTTCATGAATTAGTT+TGG - chr3_1:24659895-24659914 Msa0353950:intron 20.0%
!!! ATTGTTTTTGTTGTTTGTAT+AGG - chr3_1:24660104-24660123 Msa0353950:CDS 20.0%
!!! TTGTTTTTGTTGTTTGTATA+GGG - chr3_1:24660105-24660124 Msa0353950:CDS 20.0%
!!! ATGTAAATTTTCTTTTTTGC+AGG - chr3_1:24661492-24661511 Msa0353950:CDS 20.0%
!! TTCAATAATTATGCATAGAA+GGG + chr3_1:24661709-24661728 None:intergenic 20.0%
!! ATTCAATAATTATGCATAGA+AGG + chr3_1:24661710-24661729 None:intergenic 20.0%
!!! TTATATTTTACTTGTGTTTC+AGG - chr3_1:24662451-24662470 Msa0353950:intron 20.0%
!! TTGTACATATATAGTACATA+TGG - chr3_1:24663059-24663078 Msa0353950:intron 20.0%
!! TTCAAGAGATAGAAAAAATA+TGG + chr3_1:24664016-24664035 None:intergenic 20.0%
!! AGGGTTTGATTTATTGAAAA+TGG + chr3_1:24655427-24655446 None:intergenic 25.0%
!!! TTTGATAAGGTTTTAGTGTT+TGG - chr3_1:24656286-24656305 Msa0353950:CDS 25.0%
!! GTGAATTGAACTTGAATTTT+TGG - chr3_1:24656313-24656332 Msa0353950:CDS 25.0%
! GATTTATGATGATTCTGTTA+GGG - chr3_1:24656335-24656354 Msa0353950:intron 25.0%
!! TGGATTTTCAAAGGAATTTT+TGG - chr3_1:24656564-24656583 Msa0353950:intron 25.0%
!! TTTGGATTTATGATTTTGCT+AGG - chr3_1:24656582-24656601 Msa0353950:intron 25.0%
!! TTGGATTTATGATTTTGCTA+GGG - chr3_1:24656583-24656602 Msa0353950:intron 25.0%
!!! GTAATTGAATATGTTGACTT+AGG - chr3_1:24656625-24656644 Msa0353950:intron 25.0%
!!! GGTTTCTACTTTTTAATGTA+TGG - chr3_1:24656796-24656815 Msa0353950:intron 25.0%
!!! TATTTTGGTATATGCTCAAT+AGG - chr3_1:24656969-24656988 Msa0353950:CDS 25.0%
!! TGCATTTTATGTGTAAAGTT+AGG - chr3_1:24657026-24657045 Msa0353950:intron 25.0%
!!! ATTTTGAAGGAAATGAACTA+AGG - chr3_1:24657087-24657106 Msa0353950:intron 25.0%
! GCAGTATTTATTTGAATTGT+TGG - chr3_1:24657195-24657214 Msa0353950:CDS 25.0%
!!! GAATTGTTGGTTTTTGATTT+TGG - chr3_1:24657208-24657227 Msa0353950:CDS 25.0%
!! ATTTTAAATTTCTCCAAGTC+AGG + chr3_1:24657479-24657498 None:intergenic 25.0%
! TAAAATGACATATCTTGAAG+AGG - chr3_1:24657493-24657512 Msa0353950:CDS 25.0%
! GTCATGTTAGATAAAAACAA+AGG + chr3_1:24657745-24657764 None:intergenic 25.0%
!!! TGTTTTTATCTAACATGACT+TGG - chr3_1:24657746-24657765 Msa0353950:intron 25.0%
!! GTTTTTATCTAACATGACTT+GGG - chr3_1:24657747-24657766 Msa0353950:intron 25.0%
! TATATAGGTAGTAATCTGAT+TGG + chr3_1:24658001-24658020 None:intergenic 25.0%
! AAAGATTTGAAGAAAACTGA+TGG - chr3_1:24658349-24658368 Msa0353950:CDS 25.0%
! TCATGTACTAAAACGAAAAA+TGG + chr3_1:24658560-24658579 None:intergenic 25.0%
!! ATATGGTCATTTGATGATTA+TGG - chr3_1:24658877-24658896 Msa0353950:CDS 25.0%
! AAGTTAAGCTATTATAACCT+CGG + chr3_1:24658980-24658999 None:intergenic 25.0%
! CTTAACTTTATGTGTGATTT+AGG - chr3_1:24658992-24659011 Msa0353950:CDS 25.0%
! TAAACTTCATTCATTCATTC+TGG - chr3_1:24659048-24659067 Msa0353950:CDS 25.0%
! CATCATAAAAAAGAGAGAAA+GGG + chr3_1:24659234-24659253 None:intergenic 25.0%
! TCATCATAAAAAAGAGAGAA+AGG + chr3_1:24659235-24659254 None:intergenic 25.0%
!!! ATACATTTATTTTGCTATGC+AGG - chr3_1:24659256-24659275 Msa0353950:CDS 25.0%
! ATAGGTGTAAAAATATATGG+AGG + chr3_1:24659416-24659435 None:intergenic 25.0%
!! AAAAGTATAAACCACTATAC+GGG - chr3_1:24659436-24659455 Msa0353950:intron 25.0%
!!! TGTATTTTTTCTGCAAATCA+GGG - chr3_1:24659633-24659652 Msa0353950:intron 25.0%
!!! TGTTTTTGTTGTTTGTATAG+GGG - chr3_1:24660106-24660125 Msa0353950:CDS 25.0%
!! ACCGAATTATTTTCTTTTTC+AGG - chr3_1:24660805-24660824 Msa0353950:intron 25.0%
! CCCTGAAAAAGAAAATAATT+CGG + chr3_1:24660809-24660828 None:intergenic 25.0%
!!! CCGAATTATTTTCTTTTTCA+GGG - chr3_1:24660806-24660825 Msa0353950:intron 25.0%
!!! AATTATTTTCTTTTTCAGGG+TGG - chr3_1:24660809-24660828 Msa0353950:intron 25.0%
! AATCAAAATAACCATTGGAA+AGG + chr3_1:24660981-24661000 None:intergenic 25.0%
! ATCACAATCAAAATAACCAT+TGG + chr3_1:24660986-24661005 None:intergenic 25.0%
! ATAAGGCATAAATTATCCTA+TGG + chr3_1:24661458-24661477 None:intergenic 25.0%
! AACAAAGTTAGGTTCATATT+AGG - chr3_1:24661971-24661990 Msa0353950:CDS 25.0%
! ACAAAGTTAGGTTCATATTA+GGG - chr3_1:24661972-24661991 Msa0353950:CDS 25.0%
!! TATCTTTTATCCTTGTCTAT+TGG - chr3_1:24662214-24662233 Msa0353950:intron 25.0%
! GTCAAATAAAAAGAATCGTT+TGG - chr3_1:24662520-24662539 Msa0353950:intron 25.0%
! TGTGCTATATATATATCATC+AGG - chr3_1:24662892-24662911 Msa0353950:intron 25.0%
! AAAACACTAACATCAATACT+AGG + chr3_1:24663090-24663109 None:intergenic 25.0%
! GAAGAAACAGATTAACAAAA+GGG - chr3_1:24663153-24663172 Msa0353950:intron 25.0%
! AAGAAACAGATTAACAAAAG+GGG - chr3_1:24663154-24663173 Msa0353950:intron 25.0%
! ATATTTCATTTGAGTACGAT+TGG + chr3_1:24663734-24663753 None:intergenic 25.0%
! TATGAATTAGTGAAACTAGA+TGG - chr3_1:24663873-24663892 Msa0353950:CDS 25.0%
! AAATTGTTCAGAAGTTAGTT+TGG - chr3_1:24664038-24664057 Msa0353950:five_prime_UTR 25.0%
AGGAATGGAAATGAAAGAAA+GGG + chr3_1:24655446-24655465 None:intergenic 30.0%
! ATTTCTTCGATTGTTTTCGA+AGG + chr3_1:24655608-24655627 None:intergenic 30.0%
AAAAACACACTCAAAATCTC+TGG - chr3_1:24655693-24655712 Msa0353950:CDS 30.0%
AAAACACACTCAAAATCTCT+GGG - chr3_1:24655694-24655713 Msa0353950:CDS 30.0%
ACGGTTTCTGTTTACAATAA+CGG - chr3_1:24655869-24655888 Msa0353950:CDS 30.0%
GATAATGTGAAGAAAACTAC+TGG - chr3_1:24655983-24656002 Msa0353950:CDS 30.0%
!! TTTGTTATTGAAACTGCTGA+TGG - chr3_1:24656055-24656074 Msa0353950:CDS 30.0%
!! GTTGATTTAGGGTTTTGATA+AGG - chr3_1:24656273-24656292 Msa0353950:CDS 30.0%
GGATTTATGATGATTCTGTT+AGG - chr3_1:24656334-24656353 Msa0353950:intron 30.0%
!!! GATTTTGTTGTTGATTCTAG+AGG - chr3_1:24656394-24656413 Msa0353950:intron 30.0%
! TAGTGTTTGTGGATTTTCAA+AGG - chr3_1:24656555-24656574 Msa0353950:intron 30.0%
GGTAGTTACTATTTCATGTT+TGG - chr3_1:24656729-24656748 Msa0353950:intron 30.0%
GGGATTGAATATGTTGATAT+AGG - chr3_1:24656830-24656849 Msa0353950:intron 30.0%
CTACATTGTATGCACTAAAA+TGG + chr3_1:24657000-24657019 None:intergenic 30.0%
AATAAATACTGCAACGATAC+TGG + chr3_1:24657187-24657206 None:intergenic 30.0%
!!! TTTTGGTGCTATCATTGTTT+CGG - chr3_1:24657225-24657244 Msa0353950:CDS 30.0%
GCTAACATTGCAGAATTATT+CGG - chr3_1:24657267-24657286 Msa0353950:CDS 30.0%
! TGGTTTCTTGTATGAGTTTT+TGG - chr3_1:24657323-24657342 Msa0353950:CDS 30.0%
GACAGTTAATGAATCTGTTT+GGG - chr3_1:24657345-24657364 Msa0353950:CDS 30.0%
!! GTTCTCATTAGCTTTACATT+TGG + chr3_1:24657435-24657454 None:intergenic 30.0%
AATGTAAAGCTAATGAGAAC+TGG - chr3_1:24657435-24657454 Msa0353950:CDS 30.0%
! TAAAGTATAGTGTAACTTGC+AGG - chr3_1:24657865-24657884 Msa0353950:CDS 30.0%
CCTGGTGAAGAAAAAAATTA+AGG + chr3_1:24657921-24657940 None:intergenic 30.0%
!!! CCTTAATTTTTTTCTTCACC+AGG - chr3_1:24657918-24657937 Msa0353950:CDS 30.0%
CAAAGTGAATAAGAAGAAGA+AGG - chr3_1:24658026-24658045 Msa0353950:intron 30.0%
ACAGTACAAAAACACAAATG+AGG + chr3_1:24658224-24658243 None:intergenic 30.0%
! AGTTGAAAAATCTGGAATAG+TGG - chr3_1:24658291-24658310 Msa0353950:CDS 30.0%
TGTACTTTGATATTGACAGA+GGG - chr3_1:24658448-24658467 Msa0353950:intron 30.0%
!! CGTTTTAGTACATGAAGAAA+AGG - chr3_1:24658565-24658584 Msa0353950:CDS 30.0%
CAATAGTAGGAATTTGTGAT+GGG + chr3_1:24658625-24658644 None:intergenic 30.0%
ACAATAGTAGGAATTTGTGA+TGG + chr3_1:24658626-24658645 None:intergenic 30.0%
!!! TTTTTTTTCATGAAGATGGC+TGG - chr3_1:24658683-24658702 Msa0353950:intron 30.0%
!!! TTTTTTTCATGAAGATGGCT+GGG - chr3_1:24658684-24658703 Msa0353950:intron 30.0%
!! AATGTGAAGTCTTTGAGATA+TGG - chr3_1:24658860-24658879 Msa0353950:CDS 30.0%
AGTTAAGCTATTATAACCTC+GGG + chr3_1:24658979-24658998 None:intergenic 30.0%
AAAGTATAAACCACTATACG+GGG - chr3_1:24659437-24659456 Msa0353950:intron 30.0%
!!! GTGTATTTTTTCTGCAAATC+AGG - chr3_1:24659632-24659651 Msa0353950:intron 30.0%
!!! GTATTTTTTCTGCAAATCAG+GGG - chr3_1:24659634-24659653 Msa0353950:intron 30.0%
GGCATGAAGAAAATCTAAAA+AGG + chr3_1:24660040-24660059 None:intergenic 30.0%
ATTTGGGAAAATGAACTTGA+TGG - chr3_1:24660198-24660217 Msa0353950:intron 30.0%
GTAAGAAAAAAGCTGAAGAT+AGG - chr3_1:24660244-24660263 Msa0353950:intron 30.0%
ATCCTTGTAGCTTATAAGTT+TGG + chr3_1:24660414-24660433 None:intergenic 30.0%
AAGAGCTTATATTGTTCTCA+AGG - chr3_1:24660444-24660463 Msa0353950:intron 30.0%
AGAGCTTATATTGTTCTCAA+GGG - chr3_1:24660445-24660464 Msa0353950:intron 30.0%
TTGTCCAAAGAAGTAAAAGT+TGG - chr3_1:24660554-24660573 Msa0353950:intron 30.0%
GTAAAAGTTGGCCAATTTAT+TGG - chr3_1:24660566-24660585 Msa0353950:CDS 30.0%
CAGACACATAACCAATAAAT+TGG + chr3_1:24660580-24660599 None:intergenic 30.0%
! AAAATACCAGTTTGGTTCAA+TGG + chr3_1:24660948-24660967 None:intergenic 30.0%
AGAGAAACAAAATACCAGTT+TGG + chr3_1:24660956-24660975 None:intergenic 30.0%
GTACATACCAATTATTCCTT+TGG - chr3_1:24661073-24661092 Msa0353950:CDS 30.0%
ACAAGAACCAAAGGAATAAT+TGG + chr3_1:24661083-24661102 None:intergenic 30.0%
! ATTTCTCGTGGATTATAGTT+AGG + chr3_1:24661149-24661168 None:intergenic 30.0%
TTTGTTGAATGATGAGGAAA+TGG - chr3_1:24661187-24661206 Msa0353950:intron 30.0%
AAATTATCCTATGGTGTGTT+TGG + chr3_1:24661449-24661468 None:intergenic 30.0%
! TTGCAGGATTTTAAGCAAAA+TGG - chr3_1:24661508-24661527 Msa0353950:CDS 30.0%
! TGCAGGATTTTAAGCAAAAT+GGG - chr3_1:24661509-24661528 Msa0353950:CDS 30.0%
! AAGAGAAAGGTGTATTATTG+TGG - chr3_1:24661828-24661847 Msa0353950:CDS 30.0%
GTATTATTGTGGCAATTATG+TGG - chr3_1:24661839-24661858 Msa0353950:CDS 30.0%
GTTCATATATTAATCGGTAC+AGG + chr3_1:24661879-24661898 None:intergenic 30.0%
! TGATTTTGGACAACAAAGTT+AGG - chr3_1:24661960-24661979 Msa0353950:CDS 30.0%
CAAAGTTAGGTTCATATTAG+GGG - chr3_1:24661973-24661992 Msa0353950:CDS 30.0%
!! AAACGAGTTTGAGATTTTGA+TGG - chr3_1:24662291-24662310 Msa0353950:intron 30.0%
!! AACGAGTTTGAGATTTTGAT+GGG - chr3_1:24662292-24662311 Msa0353950:intron 30.0%
ATTGAAGAATTGTCATTCTC+TGG + chr3_1:24662608-24662627 None:intergenic 30.0%
AGAGAATGACAATTCTTCAA+TGG - chr3_1:24662607-24662626 Msa0353950:intron 30.0%
GACAATTCTTCAATGGAAAT+TGG - chr3_1:24662614-24662633 Msa0353950:intron 30.0%
ATTCTAAGTTATACACAGCT+AGG + chr3_1:24662952-24662971 None:intergenic 30.0%
GTGTATAACTTAGAATCATC+TGG - chr3_1:24662956-24662975 Msa0353950:intron 30.0%
GGAAGAAACAGATTAACAAA+AGG - chr3_1:24663152-24663171 Msa0353950:intron 30.0%
! CTACCTACATTTCTTTTCTT+GGG + chr3_1:24663451-24663470 None:intergenic 30.0%
! ATTTTTCTCACTTTCTTCTC+TGG + chr3_1:24663541-24663560 None:intergenic 30.0%
AGAAGAAAGTGAGAAAAATG+AGG - chr3_1:24663542-24663561 Msa0353950:CDS 30.0%
GAAGAAAGTGAGAAAAATGA+GGG - chr3_1:24663543-24663562 Msa0353950:CDS 30.0%
! AAGAAGAGTGGTTCTATATT+GGG - chr3_1:24663580-24663599 Msa0353950:CDS 30.0%
TGATTGCATTACAATGTAGT+TGG - chr3_1:24663845-24663864 Msa0353950:CDS 30.0%
GAGGAATGGAAATGAAAGAA+AGG + chr3_1:24655447-24655466 None:intergenic 35.0%
!! AATGAGTTTGTTGTGAGGAA+TGG + chr3_1:24655461-24655480 None:intergenic 35.0%
!! TGAGAAATGAGTTTGTTGTG+AGG + chr3_1:24655466-24655485 None:intergenic 35.0%
!! TTTTTCAATTGAACCGACGT+AGG + chr3_1:24655678-24655697 None:intergenic 35.0%
GGTTTACGAAAACGAAGAAA+TGG - chr3_1:24655715-24655734 Msa0353950:CDS 35.0%
TCTGTTTACAATAACGGTGA+CGG - chr3_1:24655875-24655894 Msa0353950:CDS 35.0%
TCTTCTTGATGAATCTCAAC+CGG + chr3_1:24655905-24655924 None:intergenic 35.0%
TGAGATTCATCAAGAAGAGA+AGG - chr3_1:24655907-24655926 Msa0353950:CDS 35.0%
AGAAGAGAAGGTTTATGTTC+CGG - chr3_1:24655919-24655938 Msa0353950:CDS 35.0%
!! TATGTTCCGGAGTTGATTTT+CGG - chr3_1:24655932-24655951 Msa0353950:CDS 35.0%
AATGTGAAGAAAACTACTGG+TGG - chr3_1:24655986-24656005 Msa0353950:CDS 35.0%
AAAACTACTGGTGGAAGAAA+CGG - chr3_1:24655995-24656014 Msa0353950:CDS 35.0%
TTATTGAAACTGCTGATGGA+CGG - chr3_1:24656059-24656078 Msa0353950:CDS 35.0%
! GAGATTGAAGAAGTATAAGC+AGG - chr3_1:24656081-24656100 Msa0353950:CDS 35.0%
!!! CTGTTAGGGTTTTTAGTGTT+TGG - chr3_1:24656349-24656368 Msa0353950:intron 35.0%
!! TTTGTTGTTGATTCTAGAGG+TGG - chr3_1:24656397-24656416 Msa0353950:intron 35.0%
!!! GCTAGTGTTTTTAGTGTTTG+TGG - chr3_1:24656544-24656563 Msa0353950:intron 35.0%
!!! TGTTGACTTAGGATTTTGCT+AGG - chr3_1:24656636-24656655 Msa0353950:intron 35.0%
!! GTTGACTTAGGATTTTGCTA+GGG - chr3_1:24656637-24656656 Msa0353950:intron 35.0%
TCCTGATTCAAGATTCTGTT+AGG - chr3_1:24656707-24656726 Msa0353950:CDS 35.0%
CCTGATTCAAGATTCTGTTA+GGG - chr3_1:24656708-24656727 Msa0353950:CDS 35.0%
!! TCATGTTTGGTGTTATGAAC+TGG - chr3_1:24656742-24656761 Msa0353950:intron 35.0%
!!! CACTTGTCGATTTAGGATTT+TGG - chr3_1:24656770-24656789 Msa0353950:intron 35.0%
!!! TGTCGATTTAGGATTTTGGT+AGG - chr3_1:24656774-24656793 Msa0353950:intron 35.0%
!! GTCGATTTAGGATTTTGGTA+GGG - chr3_1:24656775-24656794 Msa0353950:intron 35.0%
TAATGTATGGTGAAATGAGC+TGG - chr3_1:24656809-24656828 Msa0353950:intron 35.0%
AATGTATGGTGAAATGAGCT+GGG - chr3_1:24656810-24656829 Msa0353950:intron 35.0%
! TTGTCGGTCTGATGATATTT+TGG - chr3_1:24656954-24656973 Msa0353950:CDS 35.0%
CATTGTATGCACTAAAATGG+AGG + chr3_1:24656997-24657016 None:intergenic 35.0%
GAAGGAAATGAACTAAGGTT+TGG - chr3_1:24657092-24657111 Msa0353950:intron 35.0%
GGACAGTTAATGAATCTGTT+TGG - chr3_1:24657344-24657363 Msa0353950:CDS 35.0%
! AAGGTGTTCACAGACAATAT+GGG - chr3_1:24657386-24657405 Msa0353950:CDS 35.0%
GCTTTACATTTGGTTATCAG+TGG + chr3_1:24657425-24657444 None:intergenic 35.0%
ACTGTTAAGGTTGAACTCAA+TGG - chr3_1:24657572-24657591 Msa0353950:intron 35.0%
ATCTCTATAGCAACAAACCT+TGG + chr3_1:24657680-24657699 None:intergenic 35.0%
! ATGACTTGGGTTCTGTTATT+AGG - chr3_1:24657760-24657779 Msa0353950:intron 35.0%
ATTAGGACTCATACCAAAGT+AGG - chr3_1:24657777-24657796 Msa0353950:CDS 35.0%
TAACTCCATTGCTACAATCA+AGG - chr3_1:24657951-24657970 Msa0353950:intron 35.0%
AACTCCATTGCTACAATCAA+GGG - chr3_1:24657952-24657971 Msa0353950:intron 35.0%
ACACTGTGAAGAATCATTTG+TGG - chr3_1:24658067-24658086 Msa0353950:CDS 35.0%
CACTGTGAAGAATCATTTGT+GGG - chr3_1:24658068-24658087 Msa0353950:CDS 35.0%
TGGTTTGAGAATCAAAAGCA+GGG + chr3_1:24658119-24658138 None:intergenic 35.0%
! TTGGTTTGAGAATCAAAAGC+AGG + chr3_1:24658120-24658139 None:intergenic 35.0%
!! TGCTTTTGATTCTCAAACCA+AGG - chr3_1:24658119-24658138 Msa0353950:CDS 35.0%
!! ACAACTAAACCAGCTAGTTT+TGG - chr3_1:24658150-24658169 Msa0353950:CDS 35.0%
ATCTCTGCAGTTGAAAAATC+TGG - chr3_1:24658283-24658302 Msa0353950:CDS 35.0%
GTGTACTTTGATATTGACAG+AGG - chr3_1:24658447-24658466 Msa0353950:intron 35.0%
! TTTGATGATTATGGCTGATC+AGG - chr3_1:24658886-24658905 Msa0353950:CDS 35.0%
GCATGATTACATTCTATGTG+TGG - chr3_1:24658941-24658960 Msa0353950:CDS 35.0%
TTAAGCTATTATAACCTCGG+GGG + chr3_1:24658977-24658996 None:intergenic 35.0%
GTTAAGCTATTATAACCTCG+GGG + chr3_1:24658978-24658997 None:intergenic 35.0%
! TGTGTGATTTAGGATCATGA+TGG - chr3_1:24659002-24659021 Msa0353950:CDS 35.0%
GCTTAAAGTTCCATCTTTCA+TGG - chr3_1:24659079-24659098 Msa0353950:intron 35.0%
GTAAACTCAACCATGAAAGA+TGG + chr3_1:24659092-24659111 None:intergenic 35.0%
AGTTTACGACTCCCATTATA+AGG - chr3_1:24659105-24659124 Msa0353950:intron 35.0%
GTTTACGACTCCCATTATAA+GGG - chr3_1:24659106-24659125 Msa0353950:intron 35.0%
ATGAAGGATGAGAACAGAAA+GGG + chr3_1:24659207-24659226 None:intergenic 35.0%
AATGAAGGATGAGAACAGAA+AGG + chr3_1:24659208-24659227 None:intergenic 35.0%
AGAGAGAAAGGGATAAATGA+AGG + chr3_1:24659223-24659242 None:intergenic 35.0%
ATGCAGGCTTCTCATAAAAA+TGG - chr3_1:24659272-24659291 Msa0353950:CDS 35.0%
TGCAGGCTTCTCATAAAAAT+GGG - chr3_1:24659273-24659292 Msa0353950:CDS 35.0%
! TTGGGCGATAAAGTACTATA+AGG - chr3_1:24659367-24659386 Msa0353950:intron 35.0%
AAGTATAAACCACTATACGG+GGG - chr3_1:24659438-24659457 Msa0353950:intron 35.0%
AAAATTTGCCCATAGATGTC+AGG + chr3_1:24659494-24659513 None:intergenic 35.0%
!! ATGGGCAAATTTTAGTCTGT+TGG - chr3_1:24659501-24659520 Msa0353950:intron 35.0%
! TGTAGAACACACTCTAAAAG+AGG + chr3_1:24659575-24659594 None:intergenic 35.0%
AATACACCAATATCACACCA+TGG + chr3_1:24659619-24659638 None:intergenic 35.0%
AACCAATCTACTAATAGTGC+AGG + chr3_1:24659687-24659706 None:intergenic 35.0%
!! TAGTAGATTGGTTTGCTTGT+TGG - chr3_1:24659694-24659713 Msa0353950:intron 35.0%
!! TGTGAAGTTGACTTGTTTGT+TGG - chr3_1:24659761-24659780 Msa0353950:intron 35.0%
!! GTGAAGTTGACTTGTTTGTT+GGG - chr3_1:24659762-24659781 Msa0353950:intron 35.0%
!! TGAAGTTGACTTGTTTGTTG+GGG - chr3_1:24659763-24659782 Msa0353950:intron 35.0%
TAATTCTGTTATTCCTGCCA+TGG - chr3_1:24659951-24659970 Msa0353950:intron 35.0%
!! TTTGTTGTTTGTATAGGGGT+TGG - chr3_1:24660110-24660129 Msa0353950:CDS 35.0%
!! TTGTTGTTTGTATAGGGGTT+GGG - chr3_1:24660111-24660130 Msa0353950:CDS 35.0%
AGCACAGAAAAGACTTCATT+TGG - chr3_1:24660181-24660200 Msa0353950:intron 35.0%
GCACAGAAAAGACTTCATTT+GGG - chr3_1:24660182-24660201 Msa0353950:intron 35.0%
AGCCAAACTTATAAGCTACA+AGG - chr3_1:24660409-24660428 Msa0353950:CDS 35.0%
AAAAGAATCTTCCTTTGACC+AGG + chr3_1:24660515-24660534 None:intergenic 35.0%
! TTGGCCAACTTTTACTTCTT+TGG + chr3_1:24660561-24660580 None:intergenic 35.0%
AGTCTTGCTAGCACAATTAT+TGG - chr3_1:24660629-24660648 Msa0353950:CDS 35.0%
TGCTAGCACAATTATTGGAA+TGG - chr3_1:24660634-24660653 Msa0353950:CDS 35.0%
ATCAATCTTCTCACACCTAA+TGG - chr3_1:24660683-24660702 Msa0353950:CDS 35.0%
TCACACCTAATGGTCAATTT+GGG - chr3_1:24660693-24660712 Msa0353950:CDS 35.0%
TTGAGTACTTGAATGAGGAT+GGG - chr3_1:24660918-24660937 Msa0353950:intron 35.0%
TGTTTCTCTTTCCTTTCCAA+TGG - chr3_1:24660967-24660986 Msa0353950:intron 35.0%
!! ATTCCTTTGGTTCTTGTCAA+TGG - chr3_1:24661086-24661105 Msa0353950:CDS 35.0%
ACATTGGCAATAATTTCTCG+TGG + chr3_1:24661161-24661180 None:intergenic 35.0%
ATTCAACAAACGTCGAACAT+TGG + chr3_1:24661177-24661196 None:intergenic 35.0%
! GCAGGATTTTAAGCAAAATG+GGG - chr3_1:24661510-24661529 Msa0353950:CDS 35.0%
! ATGCATCTTTTTGATGCAGA+GGG - chr3_1:24661646-24661665 Msa0353950:CDS 35.0%
! AGAAGGGTATACTTTGTTCT+GGG + chr3_1:24661693-24661712 None:intergenic 35.0%
! TAGAAGGGTATACTTTGTTC+TGG + chr3_1:24661694-24661713 None:intergenic 35.0%
GAAATGACACAAAAAGTGAG+TGG + chr3_1:24661759-24661778 None:intergenic 35.0%
TTGAAGAGTTCTATCCACTT+CGG - chr3_1:24661790-24661809 Msa0353950:CDS 35.0%
! GGAGTATTATGAGAAGAGAA+AGG - chr3_1:24661815-24661834 Msa0353950:CDS 35.0%
AAATCAACAGAAGTCGTTCA+AGG + chr3_1:24661946-24661965 None:intergenic 35.0%
!!! TGAACGACTTCTGTTGATTT+TGG - chr3_1:24661946-24661965 Msa0353950:CDS 35.0%
GTGAAATTATCGTAAGCAAC+CGG - chr3_1:24662005-24662024 Msa0353950:CDS 35.0%
! TCAACAATTCAGCTCTTTTC+CGG + chr3_1:24662027-24662046 None:intergenic 35.0%
!! GATTTACCTTTCTTTGGGAT+GGG + chr3_1:24662076-24662095 None:intergenic 35.0%
! AGATTTACCTTTCTTTGGGA+TGG + chr3_1:24662077-24662096 None:intergenic 35.0%
CTGCAGATTTACCTTTCTTT+GGG + chr3_1:24662081-24662100 None:intergenic 35.0%
TCTGCAGATTTACCTTTCTT+TGG + chr3_1:24662082-24662101 None:intergenic 35.0%
TGATGACAATTCAGAAGATC+AGG - chr3_1:24662123-24662142 Msa0353950:intron 35.0%
AATTCAGAAGATCAGGAAGA+TGG - chr3_1:24662130-24662149 Msa0353950:intron 35.0%
TCTAAGTCTGTCAATGTTGA+AGG - chr3_1:24662169-24662188 Msa0353950:intron 35.0%
CAGTTTCTGAACACTTTCAA+GGG + chr3_1:24662248-24662267 None:intergenic 35.0%
TCAGAAACTGCTAGATGAAA+AGG - chr3_1:24662258-24662277 Msa0353950:intron 35.0%
!!! TTTGGTTTTGCAACTTCAAC+TGG + chr3_1:24662766-24662785 None:intergenic 35.0%
GTTGAAGTTGCAAAACCAAA+AGG - chr3_1:24662766-24662785 Msa0353950:intron 35.0%
! TTCTAAGAAGAATGCTCAGA+AGG - chr3_1:24662798-24662817 Msa0353950:intron 35.0%
AAACAGATTAACAAAAGGGG+TGG - chr3_1:24663157-24663176 Msa0353950:intron 35.0%
GAAGTCAAATACCATAGTGT+TGG - chr3_1:24663189-24663208 Msa0353950:intron 35.0%
TGACTTCGAAGTTCAAGAAA+AGG - chr3_1:24663258-24663277 Msa0353950:intron 35.0%
! TGAGTTTGAAGTTCAAGAGA+AGG - chr3_1:24663351-24663370 Msa0353950:intron 35.0%
! GCTACCTACATTTCTTTTCT+TGG + chr3_1:24663452-24663471 None:intergenic 35.0%
TGTAGGTAGCAAATCAACAT+TGG - chr3_1:24663462-24663481 Msa0353950:CDS 35.0%
GTAGGTAGCAAATCAACATT+GGG - chr3_1:24663463-24663482 Msa0353950:CDS 35.0%
TCACCATTTAACAAGAAGAG+TGG - chr3_1:24663568-24663587 Msa0353950:CDS 35.0%
GAACCACTCTTCTTGTTAAA+TGG + chr3_1:24663574-24663593 None:intergenic 35.0%
! CAAGAAGAGTGGTTCTATAT+TGG - chr3_1:24663579-24663598 Msa0353950:CDS 35.0%
GAATTAGTGAAACTAGATGG+TGG - chr3_1:24663876-24663895 Msa0353950:CDS 35.0%
! TTTTTCCATGGTGGTTGACA+CGG + chr3_1:24655552-24655571 None:intergenic 40.0%
! GTTCGAGCTGTGTTTTCTTT+TGG + chr3_1:24655634-24655653 None:intergenic 40.0%
AATTGAACCGACGTAGGTAT+CGG + chr3_1:24655672-24655691 None:intergenic 40.0%
TCAAAGATCTTGTAGAGACC+GGG + chr3_1:24655764-24655783 None:intergenic 40.0%
GTCAAAGATCTTGTAGAGAC+CGG + chr3_1:24655765-24655784 None:intergenic 40.0%
ACTTTCAACGAATCCATGGA+TGG + chr3_1:24655827-24655846 None:intergenic 40.0%
! CGTTACTTTCAACGAATCCA+TGG + chr3_1:24655831-24655850 None:intergenic 40.0%
AGATGACCGAAAATCAACTC+CGG + chr3_1:24655941-24655960 None:intergenic 40.0%
! GTTGATTCTAGAGGTGGATT+TGG - chr3_1:24656403-24656422 Msa0353950:intron 40.0%
CCCTAACAGAATCTTGAATC+AGG + chr3_1:24656711-24656730 None:intergenic 40.0%
!! GGAATTGCACTTGTCGATTT+AGG - chr3_1:24656763-24656782 Msa0353950:intron 40.0%
!! TTCGGCTAGTGCTCTTATTT+TGG - chr3_1:24657243-24657262 Msa0353950:CDS 40.0%
!! GAAGGTGTTCACAGACAATA+TGG - chr3_1:24657385-24657404 Msa0353950:CDS 40.0%
AGGTGTTCACAGACAATATG+GGG - chr3_1:24657387-24657406 Msa0353950:CDS 40.0%
TTTCTCCAAGTCAGGCTTAA+AGG + chr3_1:24657471-24657490 None:intergenic 40.0%
! TTTGATGAAAAAGCGTGTGC+TGG - chr3_1:24657526-24657545 Msa0353950:intron 40.0%
CAACCTTAACAGTCTTTCCA+AGG + chr3_1:24657565-24657584 None:intergenic 40.0%
TATAGCAACAAACCTTGGCA+GGG + chr3_1:24657675-24657694 None:intergenic 40.0%
CTCATACCAAAGTAGGTGAT+AGG - chr3_1:24657784-24657803 Msa0353950:CDS 40.0%
ATACCAAAGTAGGTGATAGG+TGG - chr3_1:24657787-24657806 Msa0353950:CDS 40.0%
TACCAAAGTAGGTGATAGGT+GGG - chr3_1:24657788-24657807 Msa0353950:CDS 40.0%
ATTTGCGTGAGTCTAAGTGA+TGG - chr3_1:24657813-24657832 Msa0353950:CDS 40.0%
TTTGCGTGAGTCTAAGTGAT+GGG - chr3_1:24657814-24657833 Msa0353950:CDS 40.0%
TTTAGTTGTCAGTGTCTCCT+TGG + chr3_1:24658139-24658158 None:intergenic 40.0%
CATTTCGAACCAAAACTAGC+TGG + chr3_1:24658162-24658181 None:intergenic 40.0%
TTGTACTGTGATCGATCAAC+AGG - chr3_1:24658235-24658254 Msa0353950:CDS 40.0%
AAAATCTGCCCATGATAGGA+GGG + chr3_1:24658320-24658339 None:intergenic 40.0%
TAAAATCTGCCCATGATAGG+AGG + chr3_1:24658321-24658340 None:intergenic 40.0%
GCTTAAAATCTGCCCATGAT+AGG + chr3_1:24658324-24658343 None:intergenic 40.0%
ATAACTTACAGCAAGAGCCT+TGG + chr3_1:24658482-24658501 None:intergenic 40.0%
TCAATGGAAACACACCATAG+TGG + chr3_1:24658730-24658749 None:intergenic 40.0%
TATGGTGTGTTTCCATTGAG+AGG - chr3_1:24658731-24658750 Msa0353950:intron 40.0%
TTGAGCAATTTGCCTCTCAA+TGG + chr3_1:24658746-24658765 None:intergenic 40.0%
GATGGAACTTTAAGCAGTGA+TGG + chr3_1:24659074-24659093 None:intergenic 40.0%
GAAAGGGATCTACTACTCAA+CGG + chr3_1:24659191-24659210 None:intergenic 40.0%
CTATGCCAGAATATAATGCG+TGG - chr3_1:24659315-24659334 Msa0353950:CDS 40.0%
TCTCTCCACGCATTATATTC+TGG + chr3_1:24659323-24659342 None:intergenic 40.0%
TAATGCGTGGAGAGAAAGAT+TGG - chr3_1:24659328-24659347 Msa0353950:intron 40.0%
AATGCGTGGAGAGAAAGATT+GGG - chr3_1:24659329-24659348 Msa0353950:intron 40.0%
! AAGGTTAGTTGTTGTGAGCA+TGG - chr3_1:24659386-24659405 Msa0353950:intron 40.0%
ATTGGGAACTATTTCCTAGC+CGG - chr3_1:24659464-24659483 Msa0353950:intron 40.0%
AGAGTGTGTTCTACATCAGA+AGG - chr3_1:24659580-24659599 Msa0353950:intron 40.0%
GAGTGTGTTCTACATCAGAA+GGG - chr3_1:24659581-24659600 Msa0353950:intron 40.0%
CTACTAATAGTGCAGGCAAA+GGG + chr3_1:24659680-24659699 None:intergenic 40.0%
TCTACTAATAGTGCAGGCAA+AGG + chr3_1:24659681-24659700 None:intergenic 40.0%
TGCCTGCACTATTAGTAGAT+TGG - chr3_1:24659682-24659701 Msa0353950:intron 40.0%
!! CTTGTTGGTGCTGTAAAGTT+GGG - chr3_1:24659709-24659728 Msa0353950:intron 40.0%
!! CGATTGCTAGTTTGAGTTGT+AGG - chr3_1:24659998-24660017 Msa0353950:intron 40.0%
! AAAGTACTCTCTTCCTTCCT+GGG + chr3_1:24660148-24660167 None:intergenic 40.0%
! TAAAGTACTCTCTTCCTTCC+TGG + chr3_1:24660149-24660168 None:intergenic 40.0%
TGATGGAAATGCAATTGAGC+TGG - chr3_1:24660215-24660234 Msa0353950:intron 40.0%
AAGCTGAAGATAGGAAGAAC+TGG - chr3_1:24660253-24660272 Msa0353950:intron 40.0%
TTCATGATCACGACAAGTAC+CGG + chr3_1:24660390-24660409 None:intergenic 40.0%
TTAAGGCCATCAACCATAGA+GGG + chr3_1:24660491-24660510 None:intergenic 40.0%
! TTTAAGGCCATCAACCATAG+AGG + chr3_1:24660492-24660511 None:intergenic 40.0%
TCTTCCTTTGACCAGGTTTA+AGG + chr3_1:24660508-24660527 None:intergenic 40.0%
TAGCAAGACTTTGTTCACCA+TGG + chr3_1:24660619-24660638 None:intergenic 40.0%
CACAATTATTGGAATGGCAC+AGG - chr3_1:24660640-24660659 Msa0353950:CDS 40.0%
CTCACACCTAATGGTCAATT+TGG - chr3_1:24660692-24660711 Msa0353950:CDS 40.0%
! TCAATTTGGGACACGTAACT+TGG - chr3_1:24660706-24660725 Msa0353950:CDS 40.0%
! AGATGTATCTGGAACTTGCA+TGG + chr3_1:24660841-24660860 None:intergenic 40.0%
TAGCTGAGTGTAGATGTATC+TGG + chr3_1:24660852-24660871 None:intergenic 40.0%
GCTTCTTGAGTACTTGAATG+AGG - chr3_1:24660913-24660932 Msa0353950:intron 40.0%
CTTGAGTACTTGAATGAGGA+TGG - chr3_1:24660917-24660936 Msa0353950:intron 40.0%
GAATCAGCTCTATGTCAATG+AGG + chr3_1:24661030-24661049 None:intergenic 40.0%
ATTTCTGTTTGTCAACACGC+AGG - chr3_1:24661051-24661070 Msa0353950:CDS 40.0%
CTACCATTGACAAGAACCAA+AGG + chr3_1:24661092-24661111 None:intergenic 40.0%
! GTTCTTGTCAATGGTAGTGA+GGG - chr3_1:24661095-24661114 Msa0353950:CDS 40.0%
! TCAATGGTAGTGAGGGAATT+GGG - chr3_1:24661102-24661121 Msa0353950:CDS 40.0%
! TCGACGTTTGTTGAATGATG+AGG - chr3_1:24661181-24661200 Msa0353950:intron 40.0%
GAAGGAGGCTATATAGTCAA+TGG - chr3_1:24661266-24661285 Msa0353950:CDS 40.0%
AGGCTATATAGTCAATGGCT+CGG - chr3_1:24661271-24661290 Msa0353950:CDS 40.0%
TCTTGAGTCCACTTTCGAAT+AGG + chr3_1:24661338-24661357 None:intergenic 40.0%
TTCCTCGAACTAACAACTGA+AGG - chr3_1:24661368-24661387 Msa0353950:CDS 40.0%
TCCTCGAACTAACAACTGAA+GGG - chr3_1:24661369-24661388 Msa0353950:CDS 40.0%
ATGAGAGGATCCTTCACATT+AGG + chr3_1:24661398-24661417 None:intergenic 40.0%
GGTCGTATTACTTCAATGAG+AGG + chr3_1:24661413-24661432 None:intergenic 40.0%
! GTGTTTGGTGAGAAAGGTAT+AGG + chr3_1:24661434-24661453 None:intergenic 40.0%
! TATGGTGTGTTTGGTGAGAA+AGG + chr3_1:24661440-24661459 None:intergenic 40.0%
TTTCTCACCAAACACACCAT+AGG - chr3_1:24661439-24661458 Msa0353950:CDS 40.0%
GTAGCTGCAATAATGCAAGA+AGG - chr3_1:24661577-24661596 Msa0353950:intron 40.0%
! CATGCATCTTTTTGATGCAG+AGG - chr3_1:24661645-24661664 Msa0353950:CDS 40.0%
! GAAGGGTATACTTTGTTCTG+GGG + chr3_1:24661692-24661711 None:intergenic 40.0%
TTCATATTAGGGGTTGTGAG+TGG - chr3_1:24661983-24662002 Msa0353950:CDS 40.0%
TTGATTGAGCTGAAGCAGAA+AGG - chr3_1:24662043-24662062 Msa0353950:CDS 40.0%
TTTACTCCCATCCCAAAGAA+AGG - chr3_1:24662067-24662086 Msa0353950:intron 40.0%
TCAATGTTGAAGGAGCAACA+TGG - chr3_1:24662179-24662198 Msa0353950:intron 40.0%
CAATGTTGAAGGAGCAACAT+GGG - chr3_1:24662180-24662199 Msa0353950:intron 40.0%
AATGTTGAAGGAGCAACATG+GGG - chr3_1:24662181-24662200 Msa0353950:intron 40.0%
! GGTCAAAGTACCAATAGACA+AGG + chr3_1:24662227-24662246 None:intergenic 40.0%
GCAGTTTCTGAACACTTTCA+AGG + chr3_1:24662249-24662268 None:intergenic 40.0%
! CTCAAACTCGTTTTCCTTGT+CGG + chr3_1:24662284-24662303 None:intergenic 40.0%
TCAACCACAGTGACTTTGAT+GGG + chr3_1:24662321-24662340 None:intergenic 40.0%
TTCAACCACAGTGACTTTGA+TGG + chr3_1:24662322-24662341 None:intergenic 40.0%
ATCAAAGTCACTGTGGTTGA+AGG - chr3_1:24662321-24662340 Msa0353950:intron 40.0%
GATAGAATAGAGGCAGAAGA+GGG - chr3_1:24662479-24662498 Msa0353950:intron 40.0%
GCTTTCTTGGTATTCTTTCG+CGG + chr3_1:24662575-24662594 None:intergenic 40.0%
TGGCTCAACATTTGCTTTCT+TGG + chr3_1:24662588-24662607 None:intergenic 40.0%
TGAGACAGTTCATACTCGAA+TGG + chr3_1:24662706-24662725 None:intergenic 40.0%
GTGTAAGTGCTCAACATGAT+TGG + chr3_1:24662871-24662890 None:intergenic 40.0%
TCATCTGGTGAAAAGTCACA+AGG - chr3_1:24662971-24662990 Msa0353950:intron 40.0%
! AGTGTTTTCTTCCTTAGCCA+TGG - chr3_1:24663102-24663121 Msa0353950:intron 40.0%
! TTAATCTGTTTCTTCCCAGC+AGG + chr3_1:24663148-24663167 None:intergenic 40.0%
ACTGTCTGATTCCAACACTA+TGG + chr3_1:24663203-24663222 None:intergenic 40.0%
GCTCCCAAGAAAAGAAATGT+AGG - chr3_1:24663445-24663464 Msa0353950:CDS 40.0%
GATGTACCTATACTTTCAGC+TGG + chr3_1:24663517-24663536 None:intergenic 40.0%
!! TCCAATTGCTGATTTGTCTG+AGG - chr3_1:24663627-24663646 Msa0353950:CDS 40.0%
!! CCAATTGCTGATTTGTCTGA+GGG - chr3_1:24663628-24663647 Msa0353950:CDS 40.0%
TGACAATGAGTCAGATGATG+AGG - chr3_1:24663774-24663793 Msa0353950:CDS 40.0%
TTTCGAAGGAATGTTCGCAG+TGG + chr3_1:24655594-24655613 None:intergenic 45.0%
ATTGAACCGACGTAGGTATC+GGG + chr3_1:24655671-24655690 None:intergenic 45.0%
GAAAGTAACGATCGATCCTG+AGG - chr3_1:24655841-24655860 Msa0353950:CDS 45.0%
ACTGGTGGAAGAAACGGTTA+TGG - chr3_1:24656001-24656020 Msa0353950:CDS 45.0%
AGCTAATGAGAACTGGACCA+AGG - chr3_1:24657442-24657461 Msa0353950:CDS 45.0%
GTGCCTTGGAAAGACTGTTA+AGG - chr3_1:24657559-24657578 Msa0353950:intron 45.0%
ATAGCAACAAACCTTGGCAG+GGG + chr3_1:24657674-24657693 None:intergenic 45.0%
CTATAGCAACAAACCTTGGC+AGG + chr3_1:24657676-24657695 None:intergenic 45.0%
TTGAGAACTCAATCTGCGTG+TGG - chr3_1:24657706-24657725 Msa0353950:intron 45.0%
TGAGAACTCAATCTGCGTGT+GGG - chr3_1:24657707-24657726 Msa0353950:intron 45.0%
!! AAGTGATGGGCAGTTTCAAC+AGG - chr3_1:24657827-24657846 Msa0353950:CDS 45.0%
TGGAGTTAACAAAGCTGACC+TGG + chr3_1:24657939-24657958 None:intergenic 45.0%
TCCATTGCTACAATCAAGGG+TGG - chr3_1:24657955-24657974 Msa0353950:intron 45.0%
CCATTGCTACAATCAAGGGT+GGG - chr3_1:24657956-24657975 Msa0353950:intron 45.0%
CACAGTGTGAGCTTTCACAT+TGG + chr3_1:24658055-24658074 None:intergenic 45.0%
TGTTCCAGAATCGATGCTGA+AGG - chr3_1:24658185-24658204 Msa0353950:CDS 45.0%
ACTGTGATCGATCAACAGGA+TGG - chr3_1:24658239-24658258 Msa0353950:CDS 45.0%
CTGATGGAACAAAGACTCAG+AGG - chr3_1:24658365-24658384 Msa0353950:CDS 45.0%
TCGTGGGATTGTAAAGCTTG+AGG - chr3_1:24658390-24658409 Msa0353950:intron 45.0%
GAGGCAAATTGCTCAATGTG+CGG - chr3_1:24658750-24658769 Msa0353950:CDS 45.0%
AGGCAAATTGCTCAATGTGC+GGG - chr3_1:24658751-24658770 Msa0353950:CDS 45.0%
CGCTAGCAATAAGCAGGTAA+TGG - chr3_1:24658775-24658794 Msa0353950:CDS 45.0%
CATGATGGCTCTCACATCAA+AGG - chr3_1:24659017-24659036 Msa0353950:CDS 45.0%
ATGCGTGGAGAGAAAGATTG+GGG - chr3_1:24659330-24659349 Msa0353950:intron 45.0%
CCCATAGATGTCAGGAAAAC+CGG + chr3_1:24659486-24659505 None:intergenic 45.0%
! CCGGTTTTCCTGACATCTAT+GGG - chr3_1:24659483-24659502 Msa0353950:intron 45.0%
! GAACACACTCTAAAAGAGGC+TGG + chr3_1:24659571-24659590 None:intergenic 45.0%
AAGGGATATCTCTGCTTCCA+TGG - chr3_1:24659599-24659618 Msa0353950:intron 45.0%
CTGCTTCCATGGTGTGATAT+TGG - chr3_1:24659610-24659629 Msa0353950:intron 45.0%
!! GCTTGTTGGTGCTGTAAAGT+TGG - chr3_1:24659708-24659727 Msa0353950:intron 45.0%
ACCAGCCTAACCAATCAGAA+CGG + chr3_1:24659738-24659757 None:intergenic 45.0%
!! AGTTGACTTGTTTGTTGGGG+AGG - chr3_1:24659766-24659785 Msa0353950:intron 45.0%
TGGGGAGGTTGTTGTAATGT+CGG - chr3_1:24659781-24659800 Msa0353950:intron 45.0%
AGCAATCGTTTCATGTGTCG+CGG + chr3_1:24659986-24660005 None:intergenic 45.0%
AAGTACTCTCTTCCTTCCTG+GGG + chr3_1:24660147-24660166 None:intergenic 45.0%
!! GAACTGGATGCGTAGTTTTG+AGG - chr3_1:24660269-24660288 Msa0353950:intron 45.0%
TCATGATCACGACAAGTACC+GGG + chr3_1:24660389-24660408 None:intergenic 45.0%
TCCATTCCCTCTATGGTTGA+TGG - chr3_1:24660482-24660501 Msa0353950:intron 45.0%
!! ATGGTTGATGGCCTTAAACC+TGG - chr3_1:24660494-24660513 Msa0353950:intron 45.0%
! ATGGCCTTAAACCTGGTCAA+AGG - chr3_1:24660501-24660520 Msa0353950:intron 45.0%
GAGCATTCTGCTTATCACCA+TGG - chr3_1:24660599-24660618 Msa0353950:CDS 45.0%
! TGGAATGGCACAGGATTTTG+TGG - chr3_1:24660649-24660668 Msa0353950:CDS 45.0%
! GGAATGGCACAGGATTTTGT+GGG - chr3_1:24660650-24660669 Msa0353950:CDS 45.0%
CGTGTCCCAAATTGACCATT+AGG + chr3_1:24660701-24660720 None:intergenic 45.0%
! CGTAACTTGGTGAGATGAAC+CGG - chr3_1:24660719-24660738 Msa0353950:CDS 45.0%
ATCAGCATGGAAAAGGCTAC+GGG + chr3_1:24660885-24660904 None:intergenic 45.0%
CATCAGCATGGAAAAGGCTA+CGG + chr3_1:24660886-24660905 None:intergenic 45.0%
GGAGATCCATTGAACCAAAC+TGG - chr3_1:24660939-24660958 Msa0353950:intron 45.0%
! GGTTCTTGTCAATGGTAGTG+AGG - chr3_1:24661094-24661113 Msa0353950:CDS 45.0%
! GTCAATGGTAGTGAGGGAAT+TGG - chr3_1:24661101-24661120 Msa0353950:CDS 45.0%
TGATGAGGAAATGGTGCCTA+TGG - chr3_1:24661196-24661215 Msa0353950:intron 45.0%
AAATGGTGCCTATGGATCCA+TGG - chr3_1:24661204-24661223 Msa0353950:intron 45.0%
CCTTTGTACCATGGATCCAT+AGG + chr3_1:24661215-24661234 None:intergenic 45.0%
CCTATGGATCCATGGTACAA+AGG - chr3_1:24661212-24661231 Msa0353950:intron 45.0%
CCTCTGAATCCTTTGTACCA+TGG + chr3_1:24661224-24661243 None:intergenic 45.0%
CCATGGTACAAAGGATTCAG+AGG - chr3_1:24661221-24661240 Msa0353950:intron 45.0%
!! AACCATTGAGAAAAGCGCCA+AGG - chr3_1:24661244-24661263 Msa0353950:intron 45.0%
! TTCCTTGGCGCTTTTCTCAA+TGG + chr3_1:24661249-24661268 None:intergenic 45.0%
!! ATTGAGAAAAGCGCCAAGGA+AGG - chr3_1:24661248-24661267 Msa0353950:intron 45.0%
GACTATATAGCCTCCTTCCT+TGG + chr3_1:24661264-24661283 None:intergenic 45.0%
! CTATATAGTCAATGGCTCGG+TGG - chr3_1:24661274-24661293 Msa0353950:CDS 45.0%
CAGAGCTTCCTATTCGAAAG+TGG - chr3_1:24661327-24661346 Msa0353950:CDS 45.0%
CCTCGAACTAACAACTGAAG+GGG - chr3_1:24661370-24661389 Msa0353950:CDS 45.0%
AAATGGGGATGATGCAATCG+TGG - chr3_1:24661525-24661544 Msa0353950:intron 45.0%
CAATCGTGGACATTGAAGTC+AGG - chr3_1:24661539-24661558 Msa0353950:intron 45.0%
GGACATTGAAGTCAGGATGA+AGG - chr3_1:24661546-24661565 Msa0353950:intron 45.0%
GTTGCTTGTGCTAATAGTGC+TGG + chr3_1:24661626-24661645 None:intergenic 45.0%
TCATAATACTCCAGCCGAAG+TGG + chr3_1:24661807-24661826 None:intergenic 45.0%
CAACAGAAGTCGTTCAAGGT+TGG + chr3_1:24661942-24661961 None:intergenic 45.0%
CAACCACAGTGACTTTGATG+GGG + chr3_1:24662320-24662339 None:intergenic 45.0%
TCAGGAGCTCGATAGAATAG+AGG - chr3_1:24662469-24662488 Msa0353950:intron 45.0%
CGATAGAATAGAGGCAGAAG+AGG - chr3_1:24662478-24662497 Msa0353950:intron 45.0%
! TTAGAACCTGCTCGTCCTTT+TGG + chr3_1:24662784-24662803 None:intergenic 45.0%
! TTCTTGGCATTTTGAGCAGC+AGG + chr3_1:24663313-24663332 None:intergenic 45.0%
TGCTGCTCAAAATGCCAAGA+AGG - chr3_1:24663312-24663331 Msa0353950:intron 45.0%
! TTGCAGCCAGCTGAAAGTAT+AGG - chr3_1:24663508-24663527 Msa0353950:CDS 45.0%
ATTGGGCAAAGCTGCTAACA+TGG - chr3_1:24663597-24663616 Msa0353950:CDS 45.0%
CCCTCAGACAAATCAGCAAT+TGG + chr3_1:24663631-24663650 None:intergenic 45.0%
TTCTAACTCTCCTACTGCAG+AGG - chr3_1:24663657-24663676 Msa0353950:CDS 45.0%
!!! TTTGTTTTTTTAATTTTTTT+TGG - chr3_1:24656461-24656480 Msa0353950:intron 5.0%
!!! TTGGAGAGGGCGTTTTTCCA+TGG + chr3_1:24655564-24655583 None:intergenic 50.0%
CGGGAACGTAGGAGATTGAA+CGG + chr3_1:24655745-24655764 None:intergenic 50.0%
CGTTCAATCTCCTACGTTCC+CGG - chr3_1:24655743-24655762 Msa0353950:CDS 50.0%
CAAACAGCGAGATCCATCCA+TGG - chr3_1:24655811-24655830 Msa0353950:CDS 50.0%
GATCGATCCTGAGGCGAATA+CGG - chr3_1:24655850-24655869 Msa0353950:CDS 50.0%
ACAGAAACCGTATTCGCCTC+AGG + chr3_1:24655860-24655879 None:intergenic 50.0%
! CAATAACGGTGACGGTGTTC+CGG - chr3_1:24655883-24655902 Msa0353950:CDS 50.0%
GTCAGGCTTAAAGGTCACCT+TGG + chr3_1:24657462-24657481 None:intergenic 50.0%
GGTGACCTTTAAGCCTGACT+TGG - chr3_1:24657463-24657482 Msa0353950:CDS 50.0%
! GAAAAAGCGTGTGCTGGACA+TGG - chr3_1:24657532-24657551 Msa0353950:intron 50.0%
TGGACTTCTCAGCGCATTTC+AGG + chr3_1:24657643-24657662 None:intergenic 50.0%
ACAAACCTTGGCAGGGGATT+GGG + chr3_1:24657668-24657687 None:intergenic 50.0%
AACAAACCTTGGCAGGGGAT+TGG + chr3_1:24657669-24657688 None:intergenic 50.0%
AACTCAATCTGCGTGTGGGT+TGG - chr3_1:24657711-24657730 Msa0353950:intron 50.0%
CTCCCACCTATCACCTACTT+TGG + chr3_1:24657793-24657812 None:intergenic 50.0%
CCCACCCTTGATTGTAGCAA+TGG + chr3_1:24657959-24657978 None:intergenic 50.0%
!! CCATCCTTCAGCATCGATTC+TGG + chr3_1:24658192-24658211 None:intergenic 50.0%
CCAGAATCGATGCTGAAGGA+TGG - chr3_1:24658189-24658208 Msa0353950:CDS 50.0%
! TAGTGGACACCCTCCTATCA+TGG - chr3_1:24658308-24658327 Msa0353950:CDS 50.0%
AGTGGACACCCTCCTATCAT+GGG - chr3_1:24658309-24658328 Msa0353950:CDS 50.0%
ACAAAGACTCAGAGGCTTCG+TGG - chr3_1:24658373-24658392 Msa0353950:CDS 50.0%
CAAAGACTCAGAGGCTTCGT+GGG - chr3_1:24658374-24658393 Msa0353950:CDS 50.0%
CTTGAGGATGCCAATGATGC+TGG - chr3_1:24658406-24658425 Msa0353950:intron 50.0%
GTTCTTTCCGCCAGCATCAT+TGG + chr3_1:24658419-24658438 None:intergenic 50.0%
! GTGGTTTTCTTATTCCCCCG+AGG - chr3_1:24658960-24658979 Msa0353950:CDS 50.0%
AGATGTCAGGAAAACCGGCT+AGG + chr3_1:24659481-24659500 None:intergenic 50.0%
!! GCCGGTTTTCCTGACATCTA+TGG - chr3_1:24659482-24659501 Msa0353950:intron 50.0%
TGATGCCAACCTCTTCGAGT+CGG + chr3_1:24659528-24659547 None:intergenic 50.0%
AGTTGGGCTTCCGTTCTGAT+TGG - chr3_1:24659725-24659744 Msa0353950:intron 50.0%
! GGCTTCCGTTCTGATTGGTT+AGG - chr3_1:24659730-24659749 Msa0353950:intron 50.0%
! TCCGTTCTGATTGGTTAGGC+TGG - chr3_1:24659734-24659753 Msa0353950:intron 50.0%
GCAATCGTTTCATGTGTCGC+GGG + chr3_1:24659985-24660004 None:intergenic 50.0%
CATTCTCTGATGTGACAGCC+CGG - chr3_1:24660368-24660387 Msa0353950:CDS 50.0%
TCTCAAGGGCAGATCTCCAA+AGG - chr3_1:24660459-24660478 Msa0353950:intron 50.0%
CCATAGAGGGAATGGACCTT+TGG + chr3_1:24660478-24660497 None:intergenic 50.0%
CCAAAGGTCCATTCCCTCTA+TGG - chr3_1:24660475-24660494 Msa0353950:intron 50.0%
GCCATCAACCATAGAGGGAA+TGG + chr3_1:24660486-24660505 None:intergenic 50.0%
!! TATAGTCAATGGCTCGGTGG+AGG - chr3_1:24661277-24661296 Msa0353950:CDS 50.0%
CCCCTTCAGTTGTTAGTTCG+AGG + chr3_1:24661373-24661392 None:intergenic 50.0%
AGAGTTCTATCCACTTCGGC+TGG - chr3_1:24661794-24661813 Msa0353950:CDS 50.0%
TCATTAGCCCCTGCAACTTG+TGG + chr3_1:24662106-24662125 None:intergenic 50.0%
AGATCAGGAAGATGGTGAGC+AGG - chr3_1:24662138-24662157 Msa0353950:intron 50.0%
GCTAGATGAAAAGGCCGACA+AGG - chr3_1:24662267-24662286 Msa0353950:intron 50.0%
GAACCCCATCAAAGTCACTG+TGG - chr3_1:24662314-24662333 Msa0353950:intron 50.0%
TTGGTATTCTTTCGCGGCTG+TGG + chr3_1:24662569-24662588 None:intergenic 50.0%
GCAAAACCAAAAGGACGAGC+AGG - chr3_1:24662775-24662794 Msa0353950:intron 50.0%
GGGTTCTTCTTCCATGGCTA+AGG + chr3_1:24663116-24663135 None:intergenic 50.0%
! ATCTGTTTCTTCCCAGCAGG+CGG + chr3_1:24663145-24663164 None:intergenic 50.0%
AAAGGCTGCTGCAGCTAAGA+AGG - chr3_1:24663276-24663295 Msa0353950:intron 50.0%
AAGGCTGCTGCAGCTAAGAA+GGG - chr3_1:24663277-24663296 Msa0353950:intron 50.0%
TTTCTCCCTCCCTTCTTAGC+CGG + chr3_1:24663382-24663401 None:intergenic 50.0%
TACCTCCGTGTCAACCACCA+TGG - chr3_1:24655544-24655563 Msa0353950:three_prime_UTR 55.0%
TTCCATGGTGGTTGACACGG+AGG + chr3_1:24655549-24655568 None:intergenic 55.0%
!!! GAGAGGGCGTTTTTCCATGG+TGG + chr3_1:24655561-24655580 None:intergenic 55.0%
! GGAATGTTCGCAGTGGTGGA+CGG + chr3_1:24655587-24655606 None:intergenic 55.0%
CGAAGGAATGTTCGCAGTGG+TGG + chr3_1:24655591-24655610 None:intergenic 55.0%
!! AACCGACGTAGGTATCGGGA+CGG + chr3_1:24655667-24655686 None:intergenic 55.0%
CTTGTAGAGACCGGGAACGT+AGG + chr3_1:24655756-24655775 None:intergenic 55.0%
GAGGATGCCAATGATGCTGG+CGG - chr3_1:24658409-24658428 Msa0353950:intron 55.0%
GACAGAGGGAGATTCTGCCA+AGG - chr3_1:24658462-24658481 Msa0353950:intron 55.0%
ATGGCTGGGCTCTCTGTTGT+GGG - chr3_1:24658698-24658717 Msa0353950:intron 55.0%
GTTGTGGGTCGAGACCACTA+TGG - chr3_1:24658713-24658732 Msa0353950:intron 55.0%
TGGGGAACACTGCGAATGCT+TGG - chr3_1:24659348-24659367 Msa0353950:intron 55.0%
GGGGAACACTGCGAATGCTT+GGG - chr3_1:24659349-24659368 Msa0353950:intron 55.0%
ACCACTATACGGGGGCTGAT+TGG - chr3_1:24659446-24659465 Msa0353950:intron 55.0%
CCACTATACGGGGGCTGATT+GGG - chr3_1:24659447-24659466 Msa0353950:intron 55.0%
! TCTGTTGGTCCGACTCGAAG+AGG - chr3_1:24659516-24659535 Msa0353950:intron 55.0%
! TTGGTCCGACTCGAAGAGGT+TGG - chr3_1:24659520-24659539 Msa0353950:intron 55.0%
GTTGGGTACAAGTACTCCCC+AGG - chr3_1:24660128-24660147 Msa0353950:CDS 55.0%
GGTACAAGTACTCCCCAGGA+AGG - chr3_1:24660132-24660151 Msa0353950:CDS 55.0%
CGGGCTGTCACATCAGAGAA+TGG + chr3_1:24660370-24660389 None:intergenic 55.0%
GGTAGTGAGGGAATTGGGAC+AGG - chr3_1:24661107-24661126 Msa0353950:CDS 55.0%
GTGAGGGAATTGGGACAGGT+TGG - chr3_1:24661111-24661130 Msa0353950:CDS 55.0%
!! GAGAAAAGCGCCAAGGAAGG+AGG - chr3_1:24661251-24661270 Msa0353950:intron 55.0%
!! TGAAGGGGCGCCTAATGTGA+AGG - chr3_1:24661385-24661404 Msa0353950:CDS 55.0%
TCTGCAGAGCCACAAGTTGC+AGG - chr3_1:24662094-24662113 Msa0353950:intron 55.0%
CTGCAGAGCCACAAGTTGCA+GGG - chr3_1:24662095-24662114 Msa0353950:intron 55.0%
TGCAGAGCCACAAGTTGCAG+GGG - chr3_1:24662096-24662115 Msa0353950:intron 55.0%
!!! GGCTGTGGTGGCTTTTTTGC+AGG + chr3_1:24662554-24662573 None:intergenic 55.0%
GTATTCTTTCGCGGCTGTGG+TGG + chr3_1:24662566-24662585 None:intergenic 55.0%
CACAGGGGGTTCTTCTTCCA+TGG + chr3_1:24663122-24663141 None:intergenic 55.0%
CTGCTGCAGCTAAGAAGGGT+GGG - chr3_1:24663281-24663300 Msa0353950:intron 55.0%
ATCCTCAGCAGCAGCCTTCT+TGG + chr3_1:24663329-24663348 None:intergenic 55.0%
AGTTCAAGAGAAGGCTGCCC+CGG - chr3_1:24663360-24663379 Msa0353950:intron 55.0%
TTCTCCCTCCCTTCTTAGCC+GGG + chr3_1:24663381-24663400 None:intergenic 55.0%
! GGCTTGGCATTTTGAGCAGC+AGG + chr3_1:24663406-24663425 None:intergenic 55.0%
!!! AGCTGCTTTTGCAGGTGGCT+TGG + chr3_1:24663422-24663441 None:intergenic 55.0%
CTCTCCTACTGCAGAGGATG+AGG - chr3_1:24663663-24663682 Msa0353950:CDS 55.0%
TCCTACTGCAGAGGATGAGG+TGG - chr3_1:24663666-24663685 Msa0353950:CDS 55.0%
ACCACCTCATCCTCTGCAGT+AGG + chr3_1:24663670-24663689 None:intergenic 55.0%
AGATTGCACCACAGCCAGCA+AGG - chr3_1:24663692-24663711 Msa0353950:CDS 55.0%
GATTGCACCACAGCCAGCAA+GGG - chr3_1:24663693-24663712 Msa0353950:CDS 55.0%
AGCAAGGGCTAGACCTCAGA+GGG - chr3_1:24663708-24663727 Msa0353950:CDS 55.0%
! TGAGTACGATTGGCCCTCTG+AGG + chr3_1:24663724-24663743 None:intergenic 55.0%
CGGAGGTAGTGTCGTCGTAG+AGG + chr3_1:24655532-24655551 None:intergenic 60.0%
!! CAGTGGTGGACGGTTGGAGA+GGG + chr3_1:24655577-24655596 None:intergenic 60.0%
!! TGTTCGCAGTGGTGGACGGT+TGG + chr3_1:24655583-24655602 None:intergenic 60.0%
CTCCGTCCCGATACCTACGT+CGG - chr3_1:24655662-24655681 Msa0353950:CDS 60.0%
AAGCGTGTGCTGGACATGGC+AGG - chr3_1:24657536-24657555 Msa0353950:intron 60.0%
AGCGTGTGCTGGACATGGCA+GGG - chr3_1:24657537-24657556 Msa0353950:intron 60.0%
CCTTGGCAGGGGATTGGGTT+TGG + chr3_1:24657663-24657682 None:intergenic 60.0%
CCAAACCCAATCCCCTGCCA+AGG - chr3_1:24657660-24657679 Msa0353950:CDS 60.0%
GATGGCTGGGCTCTCTGTTG+TGG - chr3_1:24658697-24658716 Msa0353950:intron 60.0%
GCGGGACGCTAGCAATAAGC+AGG - chr3_1:24658769-24658788 Msa0353950:CDS 60.0%
CCCAATCAGCCCCCGTATAG+TGG + chr3_1:24659450-24659469 None:intergenic 60.0%
GCTGCTGCAGCTAAGAAGGG+TGG - chr3_1:24663280-24663299 Msa0353950:intron 60.0%
TGCCAAGAAGGCTGCTGCTG+AGG - chr3_1:24663324-24663343 Msa0353950:intron 60.0%
AAGGCTGCCCCGGCTAAGAA+GGG - chr3_1:24663370-24663389 Msa0353950:CDS 60.0%
TCTCCCTCCCTTCTTAGCCG+GGG + chr3_1:24663380-24663399 None:intergenic 60.0%
!!! GCTGCAGCTGCTTTTGCAGG+TGG + chr3_1:24663427-24663446 None:intergenic 60.0%
!!! GGAGCTGCAGCTGCTTTTGC+AGG + chr3_1:24663430-24663449 None:intergenic 60.0%
!! CTCTGAGGTCTAGCCCTTGC+TGG + chr3_1:24663709-24663728 None:intergenic 60.0%
CAGCAAGGGCTAGACCTCAG+AGG - chr3_1:24663707-24663726 Msa0353950:CDS 60.0%
!! GCAGTGGTGGACGGTTGGAG+AGG + chr3_1:24655578-24655597 None:intergenic 65.0%
!! CGACGTAGGTATCGGGACGG+AGG + chr3_1:24655664-24655683 None:intergenic 65.0%
! CTGGACATGGCAGGGTGCCT+TGG - chr3_1:24657545-24657564 Msa0353950:intron 65.0%
! TGTCGCGGGTTGCAGAGCCA+TGG + chr3_1:24659971-24659990 None:intergenic 65.0%
TCTTCCCAGCAGGCGGCACA+GGG + chr3_1:24663138-24663157 None:intergenic 65.0%
TTCTTCCCAGCAGGCGGCAC+AGG + chr3_1:24663139-24663158 None:intergenic 65.0%
GAAGGCTGCCCCGGCTAAGA+AGG - chr3_1:24663369-24663388 Msa0353950:CDS 65.0%
CTGCCCCGGCTAAGAAGGGA+GGG - chr3_1:24663374-24663393 Msa0353950:CDS 65.0%
! GGTCTAGCCCTTGCTGGCTG+TGG + chr3_1:24663703-24663722 None:intergenic 65.0%
! GCGGGTTGCAGAGCCATGGC+AGG + chr3_1:24659967-24659986 None:intergenic 70.0%
AACCCCCTGTGCCGCCTGCT+GGG - chr3_1:24663131-24663150 Msa0353950:intron 70.0%
TTCCCAGCAGGCGGCACAGG+GGG + chr3_1:24663136-24663155 None:intergenic 70.0%
CTTCCCAGCAGGCGGCACAG+GGG + chr3_1:24663137-24663156 None:intergenic 70.0%
GCTGCCCCGGCTAAGAAGGG+AGG - chr3_1:24663373-24663392 Msa0353950:CDS 70.0%
GAACCCCCTGTGCCGCCTGC+TGG - chr3_1:24663130-24663149 Msa0353950:intron 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 24655409 24664061 24655409 ID=Msa0353950;Name=Msa0353950
chr3_1 mRNA 24655409 24664061 24655409 ID=Msa0353950-mRNA-1;Parent=Msa0353950;Name=Msa0353950-mRNA-1;_AED=0.07;_eAED=0.07;_QI=154|1|1|1|1|1|19|227|1505
chr3_1 exon 24655409 24656351 24655409 ID=Msa0353950-mRNA-1:exon:5443;Parent=Msa0353950-mRNA-1
chr3_1 exon 24656478 24656556 24656478 ID=Msa0353950-mRNA-1:exon:5442;Parent=Msa0353950-mRNA-1
chr3_1 exon 24656651 24656730 24656651 ID=Msa0353950-mRNA-1:exon:5441;Parent=Msa0353950-mRNA-1
chr3_1 exon 24656835 24656997 24656835 ID=Msa0353950-mRNA-1:exon:5440;Parent=Msa0353950-mRNA-1
chr3_1 exon 24657098 24657544 24657098 ID=Msa0353950-mRNA-1:exon:5439;Parent=Msa0353950-mRNA-1
chr3_1 exon 24657634 24657683 24657634 ID=Msa0353950-mRNA-1:exon:5438;Parent=Msa0353950-mRNA-1
chr3_1 exon 24657770 24657956 24657770 ID=Msa0353950-mRNA-1:exon:5437;Parent=Msa0353950-mRNA-1
chr3_1 exon 24658049 24658397 24658049 ID=Msa0353950-mRNA-1:exon:5436;Parent=Msa0353950-mRNA-1
chr3_1 exon 24658510 24658643 24658510 ID=Msa0353950-mRNA-1:exon:5435;Parent=Msa0353950-mRNA-1
chr3_1 exon 24658743 24659084 24658743 ID=Msa0353950-mRNA-1:exon:5434;Parent=Msa0353950-mRNA-1
chr3_1 exon 24659180 24659344 24659180 ID=Msa0353950-mRNA-1:exon:5433;Parent=Msa0353950-mRNA-1
chr3_1 exon 24660082 24660192 24660082 ID=Msa0353950-mRNA-1:exon:5432;Parent=Msa0353950-mRNA-1
chr3_1 exon 24660343 24660456 24660343 ID=Msa0353950-mRNA-1:exon:5431;Parent=Msa0353950-mRNA-1
chr3_1 exon 24660563 24660772 24660563 ID=Msa0353950-mRNA-1:exon:5430;Parent=Msa0353950-mRNA-1
chr3_1 exon 24660978 24661177 24660978 ID=Msa0353950-mRNA-1:exon:5429;Parent=Msa0353950-mRNA-1
chr3_1 exon 24661260 24661530 24661260 ID=Msa0353950-mRNA-1:exon:5428;Parent=Msa0353950-mRNA-1
chr3_1 exon 24661622 24661688 24661622 ID=Msa0353950-mRNA-1:exon:5427;Parent=Msa0353950-mRNA-1
chr3_1 exon 24661789 24662081 24661789 ID=Msa0353950-mRNA-1:exon:5426;Parent=Msa0353950-mRNA-1
chr3_1 exon 24663368 24664061 24663368 ID=Msa0353950-mRNA-1:exon:5425;Parent=Msa0353950-mRNA-1
chr3_1 five_prime_UTR 24663908 24664061 24663908 ID=Msa0353950-mRNA-1:five_prime_utr;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24663368 24663907 24663368 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24661789 24662081 24661789 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24661622 24661688 24661622 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24661260 24661530 24661260 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24660978 24661177 24660978 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24660563 24660772 24660563 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24660343 24660456 24660343 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24660082 24660192 24660082 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24659180 24659344 24659180 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24658743 24659084 24658743 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24658510 24658643 24658510 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24658049 24658397 24658049 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24657770 24657956 24657770 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24657634 24657683 24657634 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24657098 24657544 24657098 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24656835 24656997 24656835 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24656651 24656730 24656651 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24656478 24656556 24656478 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 CDS 24655636 24656351 24655636 ID=Msa0353950-mRNA-1:cds;Parent=Msa0353950-mRNA-1
chr3_1 three_prime_UTR 24655409 24655635 24655409 ID=Msa0353950-mRNA-1:three_prime_utr;Parent=Msa0353950-mRNA-1
Gene Sequence

>Msa0353950

ATGGAAAAACGCCCTCTCCAACCGTCCACCACTGCGAACATTCCTTCGAAAACAATCGAAGAAATGTACCAAAAGAAAACACAGCTCGAACACATTCTCCTCCGTCCCGATACCTACGTCGGTTCAATTGAAAAACACACTCAAAATCTCTGGGTTTACGAAAACGAAGAAATGGTTAACCGTTCAATCTCCTACGTTCCCGGTCTCTACAAGATCTTTGACGAGATTCTCGTCAATGCTGCTGATAACAAACAGCGAGATCCATCCATGGATTCGTTGAAAGTAACGATCGATCCTGAGGCGAATACGGTTTCTGTTTACAATAACGGTGACGGTGTTCCGGTTGAGATTCATCAAGAAGAGAAGGTTTATGTTCCGGAGTTGATTTTCGGTCATCTTCTTACGAGTAGTAATTATGATGATAATGTGAAGAAAACTACTGGTGGAAGAAACGGTTATGGTGCTAAGCTTACGAATATTTTCTCGACTGAGTTTGTTATTGAAACTGCTGATGGACGGAGATTGAAGAAGTATAAGCAGGTGTTCACAGACAATATGGGGAAGAAGTCTGATCCACTGATAACCAAATGTAAAGCTAATGAGAACTGGACCAAGGTGACCTTTAAGCCTGACTTGGAGAAATTTAAAATGACATATCTTGAAGAGGATGTTGTAGCTTTGATGAAAAAGCGTGTGCTGGACATGGCAGGGTGCCTTGGAAAGACTGTTAAGGTTGAACTCAATGGCACAGTGATTCGTTTTAAGTCTTTCAAAGATTATGCTGAGCTCTTCCTGAAATGCGCTGAGAAGTCCAAACCCAATCCCCTGCCAAGGACTCATACCAAAGTAGGTGATAGGTGGGAGATTTGCGTGAGTCTAAGTGATGGGCAGTTTCAACAGGTCAGCTTTGTTAACTCCATTGCTACAATCAAGGGTGGGACTCATGTTGATTACATCACCAATCAGATTACTACCTATATAATGAACAAAGTGAATAAGAAGAAGAAGGATGCCAATGTGAAAGCTCACACTGTGAAGAATCATTTGTGGGTTTTCGTCAATGCTCTAATTGACAACCCTGCTTTTGATTCTCAAACCAAGGAGACACTGACAACTAAACCAGCTAGTTTTGGTTCGAAATGTGATGTTCCAGAATCGATGCTGAAGGATGTTGAAAAATCTGGAATAGTGGACACCCTCCTATCATGGGCAGATTTTAAGCAAAGTAAAGATTTGAAGAAAACTGATGGAACAAAGACTCAGAGGCTTCGTGGGATTGTAAAGCTTGAGGATGCCAATGATGCTGGCGGAAAGAACTCTGATAAGTGTACTTTGATATTGACAGAGGGAGATTCTGCCAAGGCTCTTGCTATGGCTGGGCTCTCTGTTGTGGGTCGAGACCACTATGGTGTGTTTCCATTGAGAGGCAAATTGCTCAATGTGCGGGACGCTAGCAATAAGCAGGTAATGGAGAACGAAGAAATTCAAAATATAAAGAAGATTCTTGGACTGCAGCAAAACAAAGAGTACACAAATGTGAAGTCTTTGAGATATGGTCATTTGATGATTATGGCTGATCAGGATCATGATGGCTCTCACATCAAAGGACTATTGATAAACTTCATTCATTCATTCTGGCCATCACTGCTTAAAGTTCCATCTTTCATGGTTGAGTTTACGACTCCCATTATAAGGGCTTCTCATAAAAATGGGACAAAATTGTCATTTTATTCTATGCCAGAATATAATGCGTGGAGAGAAAGATTGGGGAACACTGCGAATGCTTGGGCGATAAAGTACTATAAGGGGTTGGGTACAAGTACTCCCCAGGAAGGAAGAGAGTACTTTAAAGATCTTGATAAGCACAGAAAAGACTTCATTTGGGAAAATGAACTTGATGGAAATGCAATTGAGCTGGCATTCAGTAAGAAAAAAGCTGAAGATAGGAAGAACTGGATGCGTAGTTTTGAGCCCGGTACTTGTCGTGATCATGAAGCCAAACTTATAAGCTACAAGGATTTTGTTGACAAAGAGCTTATATTGTTCTCAAGGGCAGATCTCCAAAGGTCCATTCCCTCTATGGTTGATGGCCTTAAACCTGGTCAAAGGAAGATTCTTTTCTGCTCATTTAAGAAAAATTTGTCCAAAGAAGTAAAAGTTGGCCAATTTATTGGTTATGTGTCTGAGCATTCTGCTTATCACCATGGTGAACAAAGTCTTGCTAGCACAATTATTGGAATGGCACAGGATTTTGTGGGCAGCAACAATATCAATCTTCTCACACCTAATGGTCAATTTGGGACACGTAACTTGGGTGGAAAAGACCATGCAAGTTCCAGATACATCTACACTCAGCTAAATACTGTAACCCGTAGCCTTTTCCATGCTGATGATGATAAGCTTCTTGAGTACTTGAATGAGGATGGGAGATCCATTGAACCAAACTGGTACATACCAATTATTCCTTTGGTTCTTGTCAATGGTAGTGAGGGAATTGGGACAGGTTGGAGTTCTTTCATTCCTAACTATAATCCACGAGAAATTATTGCCAATGTTCGACGTTTGTTGAATGATGAGGAAATGGTGCCTATGGATCCATGGTACAAAGGATTCAGAGGAACCATTGAGAAAAGCGCCAAGGAAGGAGGCTATATAGTCAATGGCTCGGTGGAGGAAATAGATGATCTAACTTTCAGAATCACAGAGCTTCCTATTCGAAAGTGGACTCAAGATTATAAGACGTTCCTCGAACTAACAACTGAAGGGGCGCCTAATGTGAAGGATCCTCTCATTGAAGATTTTAAGCAAAATGGGGATGATGCAATCGTGGACATTGAAGTCAGGATGAAGGCAGAAAAAGTAGCTGCAATAATGCAAGAAGGATTGTTCAAGAAGTTTAAATTGACCAGCACTATTAGCACAAGCAACATGCATCTTTTTGATGCAGAGGGAAAAATTAAGAAATTTGACACCCCAGAACAAATTCTTGAAGAGTTCTATCCACTTCGGCTGGAGTATTATGAGAAGAGAAAGAAATATATATTGGCCAACCTTGAACGACTTCTGTTGATTTTGGACAACAAAGTTAGGTTCATATTAGGGGTTGTGAGTGGTGAAATTATCGTAAGCAACCGGAAAAGAGCTGAATTGTTGATTGAGCTGAAGCAGAAAGGTTTTACTCCCATCCCAAAGAAAGGTAAATCTGCAGAGCCACAAGTTGCAGGGGCTAATGATGACAATTCAGAAGATCAGGAAGATGGTGAGCAGGAAACTGCATCTAAGTCTGTCAATGTTGAAGGAGCAACATGGGGTGACTACGAGTATCTTTTATCCTTGTCTATTGGTACTTTGACCCTTGAAAGTGTTCAGAAACTGCTAGATGAAAAGGCCGACAAGGAAAACGAGTTTGAGATTTTGATGGGAACCCCATCAAAGTCACTGTGGTTGAAGGATCTAGACGAGCTTGAAAAGAAACTTGATGAGCTCGATAGAATAGAGGCAGAAGAGGGTCAAAAGCGATCAAGCATGTCAAATAAAAAGAATCGTTTGGCTACAAAACCTGCAAAAAAGCCACCACAGCCGCGAAAGAATACCAAGAAAGCAAATGTTGAGCCAGAGAATGACAATTCTTCAATGGAAATTGAGAATGCTGTTGAAGTTGTAAAACCAGTTGAAGTTGCAAAACCAAAAGGACGAGCAGGTTCTAAGAAGAATGCTCAGAAGGAAGCTGATGACGAAATTCTATCTCTTCAAGAACGCCTAGCTGTGTATAACTTAGAATCATCTGGTGAAAAGTCACAAGCCATGGAAGAAGAACCCCCTGTGCCGCCTGCTGGGAAGAAACAGATTAACAAAAGGGGTGGTGCTAAAAAGAAGTCAAATACCATAGTGTTGGAATCAGACAGTGATAACGAAGTTAATGATGTTGAAGATGACGATGATGACTTCGAAGTTCAAGAAAAGGCTGCTGCAGCTAAGAAGGGTGGGAGAAAGCCTGCTGCTCAAAATGCCAAGAAGGCTGCTGCTGAGGATGATGAGTTTGAAGTTCAAGAGAAGGCTGCCCCGGCTAAGAAGGGAGGGAGAAAGCCTGCTGCTCAAAATGCCAAGCCACCTGCAAAAGCAGCTGCAGCTCCCAAGAAAAGAAATGTAGGTAGCAAATCAACATTGGGTCAAAAATTGTTAACTGATATGTTGCAGCCAGCTGAAAGTATAGGTACATCACCAGAGAAGAAAGTGAGAAAAATGAGGGAGTCACCATTTAACAAGAAGAGTGGTTCTATATTGGGCAAAGCTGCTAACATGGATACAAGTCCAATTGCTGATTTGTCTGAGGGCTCTACTTCTAACTCTCCTACTGCAGAGGATGAGGTGGTTGAGATTGCACCACAGCCAGCAAGGGCTAGACCTCAGAGGGCCAATCGTACTCAAATGAAATATGTAGTGAGTGAATCTGAGAGTGACAATGAGTCAGATGATGAGGATGCAGAGTTATCAGATTTTGAAGAAGATGACGACTAG
Protein sequence

>Msa0353950

MEKRPLQPSTTANIPSKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLWVYENEEMVNRSISYVPGLYKIFDEILVNAADNKQRDPSMDSLKVTIDPEANTVSVYNNGDGVPVEIHQEEKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGRRLKKYKQVFTDNMGKKSDPLITKCKANENWTKVTFKPDLEKFKMTYLEEDVVALMKKRVLDMAGCLGKTVKVELNGTVIRFKSFKDYAELFLKCAEKSKPNPLPRTHTKVGDRWEICVSLSDGQFQQVSFVNSIATIKGGTHVDYITNQITTYIMNKVNKKKKDANVKAHTVKNHLWVFVNALIDNPAFDSQTKETLTTKPASFGSKCDVPESMLKDVEKSGIVDTLLSWADFKQSKDLKKTDGTKTQRLRGIVKLEDANDAGGKNSDKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVRDASNKQVMENEEIQNIKKILGLQQNKEYTNVKSLRYGHLMIMADQDHDGSHIKGLLINFIHSFWPSLLKVPSFMVEFTTPIIRASHKNGTKLSFYSMPEYNAWRERLGNTANAWAIKYYKGLGTSTPQEGREYFKDLDKHRKDFIWENELDGNAIELAFSKKKAEDRKNWMRSFEPGTCRDHEAKLISYKDFVDKELILFSRADLQRSIPSMVDGLKPGQRKILFCSFKKNLSKEVKVGQFIGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLTPNGQFGTRNLGGKDHASSRYIYTQLNTVTRSLFHADDDKLLEYLNEDGRSIEPNWYIPIIPLVLVNGSEGIGTGWSSFIPNYNPREIIANVRRLLNDEEMVPMDPWYKGFRGTIEKSAKEGGYIVNGSVEEIDDLTFRITELPIRKWTQDYKTFLELTTEGAPNVKDPLIEDFKQNGDDAIVDIEVRMKAEKVAAIMQEGLFKKFKLTSTISTSNMHLFDAEGKIKKFDTPEQILEEFYPLRLEYYEKRKKYILANLERLLLILDNKVRFILGVVSGEIIVSNRKRAELLIELKQKGFTPIPKKGKSAEPQVAGANDDNSEDQEDGEQETASKSVNVEGATWGDYEYLLSLSIGTLTLESVQKLLDEKADKENEFEILMGTPSKSLWLKDLDELEKKLDELDRIEAEEGQKRSSMSNKKNRLATKPAKKPPQPRKNTKKANVEPENDNSSMEIENAVEVVKPVEVAKPKGRAGSKKNAQKEADDEILSLQERLAVYNLESSGEKSQAMEEEPPVPPAGKKQINKRGGAKKKSNTIVLESDSDNEVNDVEDDDDDFEVQEKAAAAKKGGRKPAAQNAKKAAAEDDEFEVQEKAAPAKKGGRKPAAQNAKPPAKAAAAPKKRNVGSKSTLGQKLLTDMLQPAESIGTSPEKKVRKMRESPFNKKSGSILGKAANMDTSPIADLSEGSTSNSPTAEDEVVEIAPQPARARPQRANRTQMKYVVSESESDNESDDEDAELSDFEEDDD*