Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430480 | XP_003603091.1 | 95.184 | 353 | 11 | 3 | 1 | 352 | 1 | 348 | 0.0 | 684 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430480 | sp|Q9FGQ7|CCD32_ARATH | 47.826 | 345 | 160 | 9 | 11 | 348 | 17 | 348 | 3.04e-91 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430480 | G7J6Z8 | 95.184 | 353 | 11 | 3 | 1 | 352 | 1 | 348 | 0.0 | 684 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0430480 | 0.810511 | 1.111749e-50 | -8.615850e-47 |
| Msa0005020 | Msa0430480 | 0.815110 | 1.093562e-51 | -8.615850e-47 |
| Msa0014770 | Msa0430480 | 0.800884 | 1.169085e-48 | -8.615850e-47 |
| Msa0015570 | Msa0430480 | 0.843049 | 1.778710e-58 | -8.615850e-47 |
| Msa0016040 | Msa0430480 | 0.835252 | 1.869989e-56 | -8.615850e-47 |
| Msa0016530 | Msa0430480 | 0.811624 | 6.378571e-51 | -8.615850e-47 |
| Msa0019930 | Msa0430480 | 0.825622 | 4.239344e-54 | -8.615850e-47 |
| Msa0020540 | Msa0430480 | 0.811470 | 6.889097e-51 | -8.615850e-47 |
| Msa0025160 | Msa0430480 | 0.840043 | 1.102537e-57 | -8.615850e-47 |
| Msa0025580 | Msa0430480 | 0.838970 | 2.095117e-57 | -8.615850e-47 |
| Msa0032460 | Msa0430480 | 0.820947 | 5.238355e-53 | -8.615850e-47 |
| Msa0032980 | Msa0430480 | 0.825820 | 3.805432e-54 | -8.615850e-47 |
| Msa0033780 | Msa0430480 | 0.805066 | 1.597235e-49 | -8.615850e-47 |
| Msa0035140 | Msa0430480 | 0.810881 | 9.247698e-51 | -8.615850e-47 |
| Msa0035380 | Msa0430480 | 0.810600 | 1.063476e-50 | -8.615850e-47 |
| Msa0037740 | Msa0430480 | 0.814573 | 1.438541e-51 | -8.615850e-47 |
| Msa0042640 | Msa0430480 | 0.819719 | 1.001821e-52 | -8.615850e-47 |
| Msa0050660 | Msa0430480 | 0.815237 | 1.024448e-51 | -8.615850e-47 |
| Msa0050700 | Msa0430480 | 0.816145 | 6.431367e-52 | -8.615850e-47 |
| Msa0050790 | Msa0430480 | 0.811880 | 5.610920e-51 | -8.615850e-47 |
| Msa0053070 | Msa0430480 | 0.812518 | 4.071927e-51 | -8.615850e-47 |
| Msa0062340 | Msa0430480 | 0.836448 | 9.301955e-57 | -8.615850e-47 |
| Msa0067060 | Msa0430480 | 0.815562 | 8.673971e-52 | -8.615850e-47 |
| Msa0067380 | Msa0430480 | 0.809625 | 1.725320e-50 | -8.615850e-47 |
| Msa0068150 | Msa0430480 | 0.804341 | 2.262682e-49 | -8.615850e-47 |
| Msa0072520 | Msa0430480 | 0.830579 | 2.712121e-55 | -8.615850e-47 |
| Msa0073120 | Msa0430480 | 0.802952 | 4.394758e-49 | -8.615850e-47 |
| Msa0075530 | Msa0430480 | 0.824655 | 7.176152e-54 | -8.615850e-47 |
| Msa0077560 | Msa0430480 | 0.810544 | 1.093366e-50 | -8.615850e-47 |
| Msa0091350 | Msa0430480 | 0.829244 | 5.735677e-55 | -8.615850e-47 |
| Msa0093860 | Msa0430480 | 0.829274 | 5.643027e-55 | -8.615850e-47 |
| Msa0094790 | Msa0430480 | 0.811510 | 6.751882e-51 | -8.615850e-47 |
| Msa0098410 | Msa0430480 | 0.816096 | 6.594393e-52 | -8.615850e-47 |
| Msa0110200 | Msa0430480 | 0.809997 | 1.435002e-50 | -8.615850e-47 |
| Msa0115550 | Msa0430480 | 0.809710 | 1.653941e-50 | -8.615850e-47 |
| Msa0121330 | Msa0430480 | 0.854267 | 1.379629e-61 | -8.615850e-47 |
| Msa0123320 | Msa0430480 | 0.800327 | 1.517992e-48 | -8.615850e-47 |
| Msa0126210 | Msa0430480 | 0.812052 | 5.147623e-51 | -8.615850e-47 |
| Msa0140130 | Msa0430480 | 0.832092 | 1.151301e-55 | -8.615850e-47 |
| Msa0140280 | Msa0430480 | 0.930979 | 7.424797e-94 | -8.615850e-47 |
| Msa0140380 | Msa0430480 | 0.828638 | 8.043324e-55 | -8.615850e-47 |
| Msa0141640 | Msa0430480 | 0.815564 | 8.665723e-52 | -8.615850e-47 |
| Msa0146650 | Msa0430480 | 0.809235 | 2.091932e-50 | -8.615850e-47 |
| Msa0153210 | Msa0430480 | 0.805820 | 1.109605e-49 | -8.615850e-47 |
| Msa0156050 | Msa0430480 | 0.819155 | 1.347345e-52 | -8.615850e-47 |
| Msa0156090 | Msa0430480 | 0.819152 | 1.349572e-52 | -8.615850e-47 |
| Msa0159590 | Msa0430480 | 0.835249 | 1.873064e-56 | -8.615850e-47 |
| Msa0159620 | Msa0430480 | 0.810259 | 1.259624e-50 | -8.615850e-47 |
| Msa0160170 | Msa0430480 | 0.803589 | 3.243691e-49 | -8.615850e-47 |
| Msa0161930 | Msa0430480 | 0.818257 | 2.153884e-52 | -8.615850e-47 |
| Msa0165830 | Msa0430480 | 0.812962 | 3.256241e-51 | -8.615850e-47 |
| Msa0166170 | Msa0430480 | 0.838237 | 3.239756e-57 | -8.615850e-47 |
| Msa0168050 | Msa0430480 | 0.836840 | 7.392444e-57 | -8.615850e-47 |
| Msa0174650 | Msa0430480 | 0.808805 | 2.586024e-50 | -8.615850e-47 |
| Msa0176060 | Msa0430480 | 0.802808 | 4.705071e-49 | -8.615850e-47 |
| Msa0190730 | Msa0430480 | 0.801741 | 7.805114e-49 | -8.615850e-47 |
| Msa0200050 | Msa0430480 | 0.854312 | 1.338453e-61 | -8.615850e-47 |
| Msa0213610 | Msa0430480 | 0.818720 | 1.691796e-52 | -8.615850e-47 |
| Msa0230800 | Msa0430480 | 0.806056 | 9.899730e-50 | -8.615850e-47 |
| Msa0232760 | Msa0430480 | 0.820481 | 6.704040e-53 | -8.615850e-47 |
| Msa0233070 | Msa0430480 | 0.821063 | 4.928086e-53 | -8.615850e-47 |
| Msa0367520 | Msa0430480 | 0.834354 | 3.146993e-56 | -8.615850e-47 |
| Msa0367690 | Msa0430480 | 0.829326 | 5.481496e-55 | -8.615850e-47 |
| Msa0368860 | Msa0430480 | 0.830697 | 2.538297e-55 | -8.615850e-47 |
| Msa0373170 | Msa0430480 | 0.818232 | 2.182352e-52 | -8.615850e-47 |
| Msa0373500 | Msa0430480 | 0.816468 | 5.443795e-52 | -8.615850e-47 |
| Msa0380670 | Msa0430480 | 0.924144 | 1.043009e-89 | -8.615850e-47 |
| Msa0382740 | Msa0430480 | 0.810051 | 1.396771e-50 | -8.615850e-47 |
| Msa0382770 | Msa0430480 | 0.814347 | 1.613279e-51 | -8.615850e-47 |
| Msa0383000 | Msa0430480 | 0.835856 | 1.315197e-56 | -8.615850e-47 |
| Msa0389950 | Msa0430480 | 0.821156 | 4.688885e-53 | -8.615850e-47 |
| Msa0400950 | Msa0430480 | 0.807678 | 4.494572e-50 | -8.615850e-47 |
| Msa0415140 | Msa0430480 | 0.814772 | 1.299602e-51 | -8.615850e-47 |
| Msa0415450 | Msa0430480 | 0.833926 | 4.028616e-56 | -8.615850e-47 |
| Msa0416160 | Msa0430480 | 0.819962 | 8.814669e-53 | -8.615850e-47 |
| Msa0419540 | Msa0430480 | 0.817554 | 3.104808e-52 | -8.615850e-47 |
| Msa0421130 | Msa0430480 | 0.837570 | 4.807794e-57 | -8.615850e-47 |
| Msa0421150 | Msa0430480 | 0.816626 | 5.019041e-52 | -8.615850e-47 |
| Msa0421750 | Msa0430480 | 0.833591 | 4.883166e-56 | -8.615850e-47 |
| Msa0426530 | Msa0430480 | 0.801309 | 9.568742e-49 | -8.615850e-47 |
| Msa0430300 | Msa0430480 | 0.900534 | 6.657109e-78 | -8.615850e-47 |
| Msa0430480 | Msa0431200 | 0.811570 | 6.553267e-51 | -8.615850e-47 |
| Msa0430480 | Msa0432010 | 0.841627 | 4.236296e-58 | -8.615850e-47 |
| Msa0430480 | Msa0433150 | 0.838417 | 2.911208e-57 | -8.615850e-47 |
| Msa0430480 | Msa0433760 | 0.826215 | 3.065217e-54 | -8.615850e-47 |
| Msa0430480 | Msa0447750 | 0.843440 | 1.399366e-58 | -8.615850e-47 |
| Msa0430480 | Msa0460070 | 0.839457 | 1.566450e-57 | -8.615850e-47 |
| Msa0430480 | Msa0462780 | 0.823748 | 1.172030e-53 | -8.615850e-47 |
| Msa0430480 | Msa0466520 | 0.832841 | 7.509851e-56 | -8.615850e-47 |
| Msa0430480 | Msa0466880 | 0.838677 | 2.494393e-57 | -8.615850e-47 |
| Msa0430480 | Msa0467690 | 0.824091 | 9.739115e-54 | -8.615850e-47 |
| Msa0430480 | Msa0472950 | 0.801759 | 7.737516e-49 | -8.615850e-47 |
| Msa0430480 | Msa0476280 | 0.801946 | 7.084317e-49 | -8.615850e-47 |
| Msa0430480 | Msa0477630 | 0.818047 | 2.402630e-52 | -8.615850e-47 |
| Msa0430480 | Msa0481890 | 0.841958 | 3.464053e-58 | -8.615850e-47 |
| Msa0430480 | Msa0484570 | 0.812159 | 4.877350e-51 | -8.615850e-47 |
| Msa0430480 | Msa0511470 | 0.800616 | 1.325776e-48 | -8.615850e-47 |
| Msa0430480 | Msa0513080 | 0.814760 | 1.307700e-51 | -8.615850e-47 |
| Msa0430480 | Msa0513560 | 0.820487 | 6.682758e-53 | -8.615850e-47 |
| Msa0430480 | Msa0514020 | 0.823950 | 1.050995e-53 | -8.615850e-47 |
| Msa0430480 | Msa0520260 | 0.807770 | 4.298154e-50 | -8.615850e-47 |
| Msa0430480 | Msa0520870 | 0.848365 | 6.419918e-60 | -8.615850e-47 |
| Msa0430480 | Msa0521320 | 0.801137 | 1.037685e-48 | -8.615850e-47 |
| Msa0430480 | Msa0521680 | 0.836070 | 1.160526e-56 | -8.615850e-47 |
| Msa0430480 | Msa0524520 | 0.813115 | 3.013304e-51 | -8.615850e-47 |
| Msa0430480 | Msa0524800 | 0.808066 | 3.716458e-50 | -8.615850e-47 |
| Msa0430480 | Msa0525000 | 0.810545 | 1.092711e-50 | -8.615850e-47 |
| Msa0430480 | Msa0527850 | 0.805820 | 1.110047e-49 | -8.615850e-47 |
| Msa0430480 | Msa0531960 | 0.824591 | 7.431108e-54 | -8.615850e-47 |
| Msa0430480 | Msa0534100 | 0.812698 | 3.719986e-51 | -8.615850e-47 |
| Msa0430480 | Msa0537990 | 0.808722 | 2.693232e-50 | -8.615850e-47 |
| Msa0430480 | Msa0541300 | 0.801970 | 7.004306e-49 | -8.615850e-47 |
| Msa0430480 | Msa0541310 | 0.801789 | 7.627656e-49 | -8.615850e-47 |
| Msa0430480 | Msa0545920 | 0.806118 | 9.606051e-50 | -8.615850e-47 |
| Msa0430480 | Msa0550590 | 0.813575 | 2.387606e-51 | -8.615850e-47 |
| Msa0430480 | Msa0553750 | 0.838929 | 2.146709e-57 | -8.615850e-47 |
| Msa0430480 | Msa0554300 | 0.805828 | 1.105543e-49 | -8.615850e-47 |
| Msa0430480 | Msa0561560 | 0.843284 | 1.540275e-58 | -8.615850e-47 |
| Msa0430480 | Msa0563740 | 0.829734 | 4.361420e-55 | -8.615850e-47 |
| Msa0430480 | Msa0563900 | 0.824636 | 7.248951e-54 | -8.615850e-47 |
| Msa0430480 | Msa0563980 | 0.809006 | 2.341595e-50 | -8.615850e-47 |
| Msa0430480 | Msa0567170 | 0.838879 | 2.211584e-57 | -8.615850e-47 |
| Msa0430480 | Msa0571620 | 0.851605 | 7.960555e-61 | -8.615850e-47 |
| Msa0430480 | Msa0572830 | 0.803568 | 3.275739e-49 | -8.615850e-47 |
| Msa0430480 | Msa0577280 | 0.835318 | 1.799185e-56 | -8.615850e-47 |
| Msa0430480 | Msa0577330 | 0.838139 | 3.433845e-57 | -8.615850e-47 |
| Msa0430480 | Msa0581840 | 0.817662 | 2.936387e-52 | -8.615850e-47 |
| Msa0430480 | Msa0585340 | 0.808571 | 2.901770e-50 | -8.615850e-47 |
| Msa0430480 | Msa0586200 | 0.804075 | 2.571114e-49 | -8.615850e-47 |
| Msa0430480 | Msa0588920 | 0.817131 | 3.865941e-52 | -8.615850e-47 |
| Msa0430480 | Msa0590200 | 0.849442 | 3.225927e-60 | -8.615850e-47 |
| Msa0430480 | Msa0597270 | 0.807075 | 6.033786e-50 | -8.615850e-47 |
| Msa0430480 | Msa0601720 | 0.804097 | 2.543286e-49 | -8.615850e-47 |
| Msa0430480 | Msa0602430 | 0.801962 | 7.029773e-49 | -8.615850e-47 |
| Msa0430480 | Msa0606100 | 0.871094 | 8.877239e-67 | -8.615850e-47 |
| Msa0430480 | Msa0607800 | 0.857129 | 2.013864e-62 | -8.615850e-47 |
| Msa0430480 | Msa0608350 | 0.803816 | 2.909502e-49 | -8.615850e-47 |
| Msa0430480 | Msa0613630 | 0.804857 | 1.765935e-49 | -8.615850e-47 |
| Msa0430480 | Msa0615630 | 0.844693 | 6.456670e-59 | -8.615850e-47 |
| Msa0430480 | Msa0620500 | 0.842659 | 2.258719e-58 | -8.615850e-47 |
| Msa0430480 | Msa0621710 | 0.848878 | 4.629271e-60 | -8.615850e-47 |
| Msa0430480 | Msa0622920 | 0.834463 | 2.954794e-56 | -8.615850e-47 |
| Msa0430480 | Msa0641990 | 0.812285 | 4.578671e-51 | -8.615850e-47 |
| Msa0430480 | Msa0647050 | 0.839950 | 1.166202e-57 | -8.615850e-47 |
| Msa0430480 | Msa0647440 | 0.807759 | 4.320552e-50 | -8.615850e-47 |
| Msa0430480 | Msa0648040 | 0.848882 | 4.617815e-60 | -8.615850e-47 |
| Msa0430480 | Msa0648760 | 0.812056 | 5.135509e-51 | -8.615850e-47 |
| Msa0430480 | Msa0654740 | 0.824961 | 6.078407e-54 | -8.615850e-47 |
| Msa0430480 | Msa0657210 | 0.805491 | 1.300918e-49 | -8.615850e-47 |
| Msa0430480 | Msa0657700 | 0.837979 | 3.776471e-57 | -8.615850e-47 |
| Msa0430480 | Msa0658640 | 0.825520 | 4.483567e-54 | -8.615850e-47 |
| Msa0430480 | Msa0666700 | 0.819401 | 1.183991e-52 | -8.615850e-47 |
| Msa0430480 | Msa0668900 | 0.842005 | 3.367791e-58 | -8.615850e-47 |
| Msa0430480 | Msa0681050 | 0.806761 | 7.032366e-50 | -8.615850e-47 |
| Msa0430480 | Msa0687090 | 0.842536 | 2.434878e-58 | -8.615850e-47 |
| Msa0430480 | Msa0688380 | 0.800079 | 1.705479e-48 | -8.615850e-47 |
| Msa0430480 | Msa0690740 | 0.845529 | 3.837632e-59 | -8.615850e-47 |
| Msa0430480 | Msa0691270 | 0.824158 | 9.390474e-54 | -8.615850e-47 |
| Msa0430480 | Msa0698730 | 0.843178 | 1.643447e-58 | -8.615850e-47 |
| Msa0430480 | Msa0702810 | 0.832270 | 1.040303e-55 | -8.615850e-47 |
| Msa0430480 | Msa0703600 | 0.826508 | 2.610443e-54 | -8.615850e-47 |
| Msa0430480 | Msa0709200 | 0.824459 | 7.982343e-54 | -8.615850e-47 |
| Msa0430480 | Msa0709440 | 0.842018 | 3.339697e-58 | -8.615850e-47 |
| Msa0430480 | Msa0714520 | 0.840541 | 8.174059e-58 | -8.615850e-47 |
| Msa0430480 | Msa0714790 | 0.818217 | 2.199045e-52 | -8.615850e-47 |
| Msa0430480 | Msa0716480 | 0.802430 | 5.632063e-49 | -8.615850e-47 |
| Msa0430480 | Msa0717900 | 0.823206 | 1.568800e-53 | -8.615850e-47 |
| Msa0430480 | Msa0722220 | 0.811746 | 5.999972e-51 | -8.615850e-47 |
| Msa0430480 | Msa0728780 | 0.813326 | 2.708168e-51 | -8.615850e-47 |
| Msa0430480 | Msa0735780 | 0.826162 | 3.155410e-54 | -8.615850e-47 |
| Msa0430480 | Msa0737990 | 0.824440 | 8.060781e-54 | -8.615850e-47 |
| Msa0430480 | Msa0743440 | 0.851342 | 9.445107e-61 | -8.615850e-47 |
| Msa0430480 | Msa0745720 | 0.845714 | 3.419467e-59 | -8.615850e-47 |
| Msa0430480 | Msa0747740 | 0.828765 | 7.496401e-55 | -8.615850e-47 |
| Msa0430480 | Msa0756820 | 0.828972 | 6.676433e-55 | -8.615850e-47 |
| Msa0430480 | Msa0757100 | 0.811917 | 5.507541e-51 | -8.615850e-47 |
| Msa0430480 | Msa0758650 | 0.838241 | 3.232123e-57 | -8.615850e-47 |
| Msa0430480 | Msa0761670 | 0.816211 | 6.214399e-52 | -8.615850e-47 |
| Msa0430480 | Msa0763550 | 0.805672 | 1.192048e-49 | -8.615850e-47 |
| Msa0430480 | Msa0773630 | 0.852019 | 6.072920e-61 | -8.615850e-47 |
| Msa0430480 | Msa0780910 | 0.834781 | 2.456889e-56 | -8.615850e-47 |
| Msa0430480 | Msa0800660 | 0.812047 | 5.158764e-51 | -8.615850e-47 |
| Msa0430480 | Msa0805680 | 0.847009 | 1.516580e-59 | -8.615850e-47 |
| Msa0430480 | Msa0811020 | 0.844125 | 9.176632e-59 | -8.615850e-47 |
| Msa0430480 | Msa0816080 | 0.816231 | 6.150778e-52 | -8.615850e-47 |
| Msa0430480 | Msa0817360 | 0.807093 | 5.980058e-50 | -8.615850e-47 |
| Msa0430480 | Msa0818880 | 0.828750 | 7.558001e-55 | -8.615850e-47 |
| Msa0430480 | Msa0821160 | 0.844246 | 8.511097e-59 | -8.615850e-47 |
| Msa0430480 | Msa0828970 | 0.836000 | 1.209084e-56 | -8.615850e-47 |
| Msa0430480 | Msa0837460 | 0.809280 | 2.045696e-50 | -8.615850e-47 |
| Msa0430480 | Msa0843050 | 0.803098 | 4.099299e-49 | -8.615850e-47 |
| Msa0430480 | Msa0855230 | 0.812148 | 4.903637e-51 | -8.615850e-47 |
| Msa0430480 | Msa0863620 | 0.873091 | 1.923282e-67 | -8.615850e-47 |
| Msa0430480 | Msa0867110 | 0.844701 | 6.421989e-59 | -8.615850e-47 |
| Msa0430480 | Msa0879920 | 0.820801 | 5.659707e-53 | -8.615850e-47 |
| Msa0430480 | Msa0900760 | 0.815861 | 7.442522e-52 | -8.615850e-47 |
| Msa0430480 | Msa0909760 | 0.821953 | 3.069403e-53 | -8.615850e-47 |
| Msa0430480 | Msa0924430 | 0.807608 | 4.652452e-50 | -8.615850e-47 |
| Msa0430480 | Msa0931590 | 0.853366 | 2.506649e-61 | -8.615850e-47 |
| Msa0430480 | Msa0966320 | 0.821090 | 4.857458e-53 | -8.615850e-47 |
| Msa0430480 | Msa0966480 | 0.811198 | 7.892472e-51 | -8.615850e-47 |
| Msa0430480 | Msa1002640 | 0.817589 | 3.049815e-52 | -8.615850e-47 |
| Msa0430480 | Msa1008670 | 0.815451 | 9.181362e-52 | -8.615850e-47 |
| Msa0430480 | Msa1015250 | 0.809836 | 1.553614e-50 | -8.615850e-47 |
| Msa0430480 | Msa1029530 | 0.820176 | 7.877736e-53 | -8.615850e-47 |
| Msa0430480 | Msa1033920 | 0.847261 | 1.293250e-59 | -8.615850e-47 |
| Msa0430480 | Msa1035220 | 0.803952 | 2.726164e-49 | -8.615850e-47 |
| Msa0430480 | Msa1035570 | 0.818602 | 1.799093e-52 | -8.615850e-47 |
| Msa0430480 | Msa1035610 | 0.830212 | 3.335084e-55 | -8.615850e-47 |
| Msa0430480 | Msa1035650 | 0.807193 | 5.697016e-50 | -8.615850e-47 |
| Msa0430480 | Msa1037540 | 0.802816 | 4.687606e-49 | -8.615850e-47 |
| Msa0430480 | Msa1042160 | 0.827274 | 1.712590e-54 | -8.615850e-47 |
| Msa0430480 | Msa1042190 | 0.830704 | 2.527630e-55 | -8.615850e-47 |
| Msa0430480 | Msa1042880 | 0.830241 | 3.281161e-55 | -8.615850e-47 |
| Msa0430480 | Msa1056830 | 0.842231 | 2.934455e-58 | -8.615850e-47 |
| Msa0430480 | Msa1059020 | 0.834527 | 2.846215e-56 | -8.615850e-47 |
| Msa0430480 | Msa1068400 | 0.819502 | 1.123095e-52 | -8.615850e-47 |
| Msa0430480 | Msa1076020 | 0.841990 | 3.397236e-58 | -8.615850e-47 |
| Msa0430480 | Msa1078880 | 0.833961 | 3.947495e-56 | -8.615850e-47 |
| Msa0430480 | Msa1078970 | 0.818173 | 2.250726e-52 | -8.615850e-47 |
| Msa0430480 | Msa1082200 | 0.808255 | 3.388127e-50 | -8.615850e-47 |
| Msa0430480 | Msa1082380 | 0.829991 | 3.776510e-55 | -8.615850e-47 |
| Msa0430480 | Msa1084530 | 0.848238 | 6.960609e-60 | -8.615850e-47 |
| Msa0430480 | Msa1092420 | 0.813690 | 2.252519e-51 | -8.615850e-47 |
| Msa0430480 | Msa1104220 | 0.822674 | 2.087527e-53 | -8.615850e-47 |
| Msa0430480 | Msa1109390 | 0.801044 | 1.084127e-48 | -8.615850e-47 |
| Msa0430480 | Msa1114630 | 0.825382 | 4.833601e-54 | -8.615850e-47 |
| Msa0430480 | Msa1116190 | 0.819614 | 1.058567e-52 | -8.615850e-47 |
| Msa0430480 | Msa1116660 | 0.832490 | 9.175890e-56 | -8.615850e-47 |
| Msa0430480 | Msa1116740 | 0.812913 | 3.336728e-51 | -8.615850e-47 |
| Msa0430480 | Msa1123210 | 0.812145 | 4.911567e-51 | -8.615850e-47 |
| Msa0430480 | Msa1125820 | 0.849233 | 3.688220e-60 | -8.615850e-47 |
| Msa0430480 | Msa1125990 | 0.847380 | 1.199477e-59 | -8.615850e-47 |
| Msa0430480 | Msa1127280 | 0.844585 | 6.900238e-59 | -8.615850e-47 |
| Msa0430480 | Msa1127470 | 0.843708 | 1.186470e-58 | -8.615850e-47 |
| Msa0430480 | Msa1130420 | 0.802698 | 4.957918e-49 | -8.615850e-47 |
| Msa0430480 | Msa1132530 | 0.853962 | 1.689519e-61 | -8.615850e-47 |
| Msa0430480 | Msa1139050 | 0.816508 | 5.335313e-52 | -8.615850e-47 |
| Msa0430480 | Msa1159590 | 0.837811 | 4.170775e-57 | -8.615850e-47 |
| Msa0430480 | Msa1162880 | 0.840891 | 6.618026e-58 | -8.615850e-47 |
| Msa0430480 | Msa1163180 | 0.832182 | 1.094102e-55 | -8.615850e-47 |
| Msa0430480 | Msa1165480 | 0.843190 | 1.632104e-58 | -8.615850e-47 |
| Msa0430480 | Msa1167470 | 0.829684 | 4.485690e-55 | -8.615850e-47 |
| Msa0430480 | Msa1169190 | 0.831894 | 1.288577e-55 | -8.615850e-47 |
| Msa0430480 | Msa1171290 | 0.835349 | 1.767120e-56 | -8.615850e-47 |
| Msa0430480 | Msa1191520 | 0.816561 | 5.190257e-52 | -8.615850e-47 |
| Msa0430480 | Msa1201540 | 0.812936 | 3.298690e-51 | -8.615850e-47 |
| Msa0430480 | Msa1201780 | 0.817000 | 4.137503e-52 | -8.615850e-47 |
| Msa0430480 | Msa1213830 | 0.840716 | 7.354162e-58 | -8.615850e-47 |
| Msa0430480 | Msa1214350 | 0.836136 | 1.116858e-56 | -8.615850e-47 |
| Msa0430480 | Msa1215870 | 0.814922 | 1.203374e-51 | -8.615850e-47 |
| Msa0430480 | Msa1215980 | 0.844023 | 9.771552e-59 | -8.615850e-47 |
| Msa0430480 | Msa1217910 | 0.810568 | 1.080427e-50 | -8.615850e-47 |
| Msa0430480 | Msa1218820 | 0.832324 | 1.008920e-55 | -8.615850e-47 |
| Msa0430480 | Msa1220030 | 0.802493 | 5.464959e-49 | -8.615850e-47 |
| Msa0430480 | Msa1220170 | 0.812051 | 5.148542e-51 | -8.615850e-47 |
| Msa0430480 | Msa1223390 | 0.844477 | 7.379754e-59 | -8.615850e-47 |
| Msa0430480 | Msa1226520 | 0.824800 | 6.633481e-54 | -8.615850e-47 |
| Msa0430480 | Msa1228630 | 0.830318 | 3.141318e-55 | -8.615850e-47 |
| Msa0430480 | Msa1234140 | 0.800902 | 1.159159e-48 | -8.615850e-47 |
| Msa0430480 | Msa1240770 | 0.812934 | 3.301357e-51 | -8.615850e-47 |
| Msa0430480 | Msa1244240 | 0.819509 | 1.119072e-52 | -8.615850e-47 |
| Msa0430480 | Msa1252790 | 0.826874 | 2.135239e-54 | -8.615850e-47 |
| Msa0430480 | Msa1254420 | 0.817199 | 3.731762e-52 | -8.615850e-47 |
| Msa0430480 | Msa1254540 | 0.856749 | 2.606882e-62 | -8.615850e-47 |
| Msa0430480 | Msa1261050 | 0.852263 | 5.177089e-61 | -8.615850e-47 |
| Msa0430480 | Msa1263740 | 0.830849 | 2.329853e-55 | -8.615850e-47 |
| Msa0430480 | Msa1263780 | 0.835166 | 1.966086e-56 | -8.615850e-47 |
| Msa0430480 | Msa1263900 | 0.822768 | 1.985527e-53 | -8.615850e-47 |
| Msa0430480 | Msa1279120 | 0.832792 | 7.723812e-56 | -8.615850e-47 |
| Msa0430480 | Msa1279150 | 0.827082 | 1.903933e-54 | -8.615850e-47 |
| Msa0430480 | Msa1294460 | 0.826135 | 3.203268e-54 | -8.615850e-47 |
| Msa0430480 | Msa1294790 | 0.823972 | 1.038813e-53 | -8.615850e-47 |
| Msa0430480 | Msa1300460 | 0.877387 | 6.548612e-69 | -8.615850e-47 |
| Msa0430480 | Msa1306570 | 0.806804 | 6.886382e-50 | -8.615850e-47 |
| Msa0430480 | Msa1306790 | 0.804118 | 2.518090e-49 | -8.615850e-47 |
| Msa0430480 | Msa1307630 | 0.800005 | 1.765515e-48 | -8.615850e-47 |
| Msa0430480 | Msa1315130 | 0.800490 | 1.406747e-48 | -8.615850e-47 |
| Msa0430480 | Msa1315160 | 0.819003 | 1.458897e-52 | -8.615850e-47 |
| Msa0430480 | Msa1321530 | 0.839125 | 1.910194e-57 | -8.615850e-47 |
| Msa0430480 | Msa1332950 | 0.854056 | 1.586811e-61 | -8.615850e-47 |
| Msa0430480 | Msa1339170 | 0.850516 | 1.614157e-60 | -8.615850e-47 |
| Msa0430480 | Msa1342810 | 0.800455 | 1.429645e-48 | -8.615850e-47 |
| Msa0430480 | Msa1361930 | 0.812948 | 3.279157e-51 | -8.615850e-47 |
| Msa0430480 | Msa1362130 | 0.845857 | 3.125653e-59 | -8.615850e-47 |
| Msa0430480 | Msa1364410 | 0.840846 | 6.800365e-58 | -8.615850e-47 |
| Msa0430480 | Msa1364680 | 0.809976 | 1.449798e-50 | -8.615850e-47 |
| Msa0430480 | Msa1366150 | 0.820049 | 8.420359e-53 | -8.615850e-47 |
| Msa0430480 | Msa1367180 | 0.822383 | 2.439639e-53 | -8.615850e-47 |
| Msa0430480 | Msa1368750 | 0.843470 | 1.374131e-58 | -8.615850e-47 |
| Msa0430480 | Msa1374790 | 0.843263 | 1.559857e-58 | -8.615850e-47 |
| Msa0430480 | Msa1375350 | 0.812231 | 4.704479e-51 | -8.615850e-47 |
| Msa0430480 | Msa1380120 | 0.803836 | 2.881923e-49 | -8.615850e-47 |
| Msa0430480 | Msa1381470 | 0.828603 | 8.203357e-55 | -8.615850e-47 |
| Msa0430480 | Msa1384150 | 0.807409 | 5.127760e-50 | -8.615850e-47 |
| Msa0430480 | Msa1387440 | 0.824185 | 9.253958e-54 | -8.615850e-47 |
| Msa0430480 | Msa1389820 | 0.808591 | 2.873342e-50 | -8.615850e-47 |
| Msa0430480 | Msa1393560 | 0.800636 | 1.313094e-48 | -8.615850e-47 |
| Msa0430480 | Msa1393780 | 0.807021 | 6.195288e-50 | -8.615850e-47 |
| Msa0430480 | Msa1406720 | 0.830825 | 2.361347e-55 | -8.615850e-47 |
| Msa0430480 | Msa1409410 | 0.815959 | 7.076648e-52 | -8.615850e-47 |
| Msa0430480 | Msa1417060 | 0.817949 | 2.528346e-52 | -8.615850e-47 |
| Msa0430480 | Msa1429070 | 0.801779 | 7.665259e-49 | -8.615850e-47 |
| Msa0430480 | Msa1434640 | 0.800649 | 1.305595e-48 | -8.615850e-47 |
| Msa0430480 | Msa1437930 | 0.801030 | 1.091165e-48 | -8.615850e-47 |
| Msa0430480 | Msa1440630 | 0.810700 | 1.011721e-50 | -8.615850e-47 |
| Msa0430480 | Msa1445120 | 0.833124 | 6.385291e-56 | -8.615850e-47 |
| Msa0430480 | Msa1446100 | 0.813054 | 3.108347e-51 | -8.615850e-47 |
| Msa0430480 | Msa1447170 | 0.820336 | 7.240088e-53 | -8.615850e-47 |
| Msa0430480 | Msa1450190 | 0.839681 | 1.370003e-57 | -8.615850e-47 |
| Msa0430480 | Msa1451820 | 0.842798 | 2.075067e-58 | -8.615850e-47 |
| Msa0430480 | Msa1462490 | 0.800383 | 1.478685e-48 | -8.615850e-47 |
| Msa0269210 | Msa0430480 | 0.805315 | 1.416619e-49 | -8.615850e-47 |
| Msa0272260 | Msa0430480 | 0.801961 | 7.033447e-49 | -8.615850e-47 |
| Msa0280790 | Msa0430480 | 0.807059 | 6.082566e-50 | -8.615850e-47 |
| Msa0284800 | Msa0430480 | 0.825596 | 4.300275e-54 | -8.615850e-47 |
| Msa0293040 | Msa0430480 | 0.815207 | 1.040656e-51 | -8.615850e-47 |
| Msa0330520 | Msa0430480 | 0.811543 | 6.641614e-51 | -8.615850e-47 |
| Msa0341680 | Msa0430480 | 0.807279 | 5.461525e-50 | -8.615850e-47 |
| Msa0343010 | Msa0430480 | 0.809326 | 1.999535e-50 | -8.615850e-47 |
| Msa0347530 | Msa0430480 | 0.813093 | 3.047361e-51 | -8.615850e-47 |
| Msa0353950 | Msa0430480 | 0.839239 | 1.784535e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430480 | MtrunA17_Chr3g0134261 | 95.184 | 353 | 11 | 3 | 1 | 352 | 1 | 348 | 0.0 | 684 |
| Msa0430480 | MtrunA17_Chr4g0053381 | 53.892 | 334 | 141 | 6 | 23 | 348 | 12 | 340 | 9.26e-112 | 330 |
| Msa0430480 | MtrunA17_Chr1g0208231 | 56.766 | 303 | 119 | 6 | 53 | 348 | 66 | 363 | 1.37e-110 | 327 |
| Msa0430480 | MtrunA17_Chr5g0412471 | 34.641 | 306 | 169 | 8 | 34 | 323 | 38 | 328 | 4.80e-46 | 160 |
| Msa0430480 | MtrunA17_Chr4g0041721 | 36.626 | 243 | 135 | 8 | 88 | 321 | 91 | 323 | 2.27e-43 | 153 |
| Msa0430480 | MtrunA17_Chr5g0414271 | 43.137 | 204 | 103 | 3 | 88 | 285 | 76 | 272 | 1.02e-41 | 148 |
| Msa0430480 | MtrunA17_Chr3g0133211 | 44.578 | 166 | 92 | 0 | 88 | 253 | 96 | 261 | 2.20e-40 | 145 |
| Msa0430480 | MtrunA17_Chr8g0364521 | 38.498 | 213 | 118 | 3 | 87 | 293 | 92 | 297 | 1.38e-37 | 138 |
| Msa0430480 | MtrunA17_Chr5g0427191 | 32.323 | 297 | 193 | 5 | 60 | 349 | 55 | 350 | 8.10e-36 | 133 |
| Msa0430480 | MtrunA17_Chr8g0367661 | 33.210 | 271 | 166 | 8 | 89 | 351 | 108 | 371 | 8.38e-32 | 123 |
| Msa0430480 | MtrunA17_Chr5g0401271 | 36.364 | 187 | 110 | 4 | 85 | 269 | 99 | 278 | 1.83e-30 | 119 |
| Msa0430480 | MtrunA17_Chr2g0280941 | 31.760 | 233 | 143 | 7 | 85 | 314 | 37 | 256 | 1.58e-27 | 108 |
| Msa0430480 | MtrunA17_Chr3g0134781 | 46.154 | 130 | 65 | 2 | 80 | 205 | 54 | 182 | 2.15e-27 | 109 |
| Msa0430480 | MtrunA17_Chr2g0323361 | 31.140 | 228 | 137 | 8 | 66 | 282 | 26 | 244 | 9.38e-23 | 96.7 |
| Msa0430480 | MtrunA17_Chr4g0054011 | 27.778 | 252 | 156 | 8 | 89 | 335 | 68 | 298 | 2.12e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0430480 | AT5G67260.1 | 47.826 | 345 | 160 | 9 | 11 | 348 | 17 | 348 | 3.09e-92 | 280 |
| Msa0430480 | AT5G67260.2 | 47.826 | 345 | 160 | 9 | 11 | 348 | 17 | 348 | 9.86e-92 | 280 |
| Msa0430480 | AT4G34160.1 | 52.174 | 276 | 122 | 4 | 10 | 285 | 17 | 282 | 1.40e-91 | 279 |
| Msa0430480 | AT3G50070.1 | 46.452 | 310 | 138 | 7 | 8 | 310 | 13 | 301 | 6.37e-84 | 259 |
| Msa0430480 | AT1G70210.1 | 40.086 | 232 | 130 | 5 | 58 | 282 | 47 | 276 | 2.38e-46 | 161 |
| Msa0430480 | AT2G22490.1 | 38.197 | 233 | 135 | 4 | 87 | 314 | 95 | 323 | 7.76e-44 | 155 |
| Msa0430480 | AT2G22490.2 | 38.197 | 233 | 136 | 3 | 87 | 314 | 95 | 324 | 7.80e-43 | 152 |
| Msa0430480 | AT5G65420.4 | 41.317 | 167 | 92 | 2 | 85 | 248 | 74 | 237 | 6.20e-34 | 126 |
| Msa0430480 | AT5G65420.1 | 34.322 | 236 | 135 | 5 | 85 | 317 | 74 | 292 | 7.61e-34 | 127 |
| Msa0430480 | AT5G65420.2 | 40.523 | 153 | 90 | 1 | 85 | 236 | 74 | 226 | 4.18e-33 | 123 |
| Msa0430480 | AT5G65420.3 | 32.927 | 246 | 135 | 6 | 85 | 317 | 74 | 302 | 1.05e-31 | 122 |
| Msa0430480 | AT5G10440.1 | 36.735 | 196 | 114 | 5 | 60 | 248 | 36 | 228 | 3.73e-28 | 112 |
| Msa0430480 | AT5G10440.2 | 35.294 | 187 | 116 | 4 | 60 | 241 | 36 | 222 | 6.49e-28 | 109 |
| Msa0430480 | AT4G03270.1 | 30.620 | 258 | 160 | 6 | 79 | 331 | 48 | 291 | 6.44e-23 | 97.8 |
| Msa0430480 | AT4G03270.2 | 30.620 | 258 | 159 | 7 | 79 | 331 | 48 | 290 | 2.02e-21 | 93.6 |
| Msa0430480 | AT4G37630.2 | 38.136 | 118 | 72 | 1 | 92 | 209 | 75 | 191 | 1.71e-20 | 90.1 |
| Msa0430480 | AT4G37630.3 | 39.669 | 121 | 68 | 3 | 92 | 209 | 75 | 193 | 2.03e-20 | 89.7 |
| Msa0430480 | AT4G37630.1 | 39.669 | 121 | 68 | 3 | 92 | 209 | 75 | 193 | 4.75e-20 | 90.1 |
| Msa0430480 | AT5G02110.1 | 32.099 | 162 | 105 | 3 | 85 | 245 | 74 | 231 | 3.44e-17 | 82.0 |
| Msa0430480 | AT5G02110.2 | 35.200 | 125 | 76 | 3 | 122 | 245 | 82 | 202 | 3.98e-13 | 69.7 |
Find 83 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCAGCTTCTTGGTATTCT+TGG | 0.183134 | 3_2:-82355194 | Msa0430480:CDS |
| GTTTATTGTTGTGTTGTTTA+AGG | 0.198020 | 3_2:+82356046 | None:intergenic |
| GACATTTCCATTACACCTTT+TGG | 0.225762 | 3_2:+82354941 | None:intergenic |
| TCTTTCTCTTGCTGCTAAAA+TGG | 0.227658 | 3_2:-82355736 | Msa0430480:CDS |
| CTATAACCCAATGTTACTTT+TGG | 0.238967 | 3_2:-82356144 | Msa0430480:CDS |
| TGTTAGAAACCGACATGTTT+TGG | 0.243497 | 3_2:-82356007 | Msa0430480:CDS |
| GATGAGTTAGAGTTTGAGTT+TGG | 0.256399 | 3_2:-82356083 | Msa0430480:CDS |
| CAATGCAACAAACGCAAGTT+TGG | 0.256632 | 3_2:-82354980 | Msa0430480:CDS |
| TTCTCTTTATTGAGACAAAT+TGG | 0.258321 | 3_2:+82356256 | None:intergenic |
| TCTTGAAACCAACCCTGTTT+TGG | 0.259066 | 3_2:-82355925 | Msa0430480:CDS |
| GAAGCATTATGCTCTTATTA+TGG | 0.259300 | 3_2:-82356236 | Msa0430480:five_prime_UTR |
| AAAGTGGAAGTGGATTTATT+TGG | 0.277922 | 3_2:+82354472 | None:intergenic |
| CTTCGAGCAGTTTCCAAAAC+AGG | 0.289915 | 3_2:+82355912 | None:intergenic |
| AGTCTTTCATGATTGATAAC+TGG | 0.339927 | 3_2:+82354649 | None:intergenic |
| GAGTTATCTACCTTCTGTTT+TGG | 0.348297 | 3_2:-82355279 | Msa0430480:CDS |
| GAATATCAAATCCAGCTTCT+TGG | 0.360410 | 3_2:-82355203 | Msa0430480:CDS |
| ATGAAGAGTTTAATAGAAAC+TGG | 0.368473 | 3_2:+82354819 | None:intergenic |
| TTGCTGTCAACTATCTTGAT+AGG | 0.370220 | 3_2:-82355824 | Msa0430480:CDS |
| AATAAATACACTAATTGATA+TGG | 0.377674 | 3_2:+82354512 | None:intergenic |
| CTTCTCTCTGTCATTAGATC+AGG | 0.392447 | 3_2:-82355410 | Msa0430480:intron |
| ATAAAAGAAAGAGGTGTTGC+TGG | 0.406180 | 3_2:+82355506 | None:intergenic |
| GATTGAAAGATCATCTTTGT+TGG | 0.408339 | 3_2:-82355460 | Msa0430480:CDS |
| TAGGCCCATCTCAGGATTCA+TGG | 0.410227 | 3_2:+82354624 | None:intergenic |
| GTGATAATTCCAATGATTCA+TGG | 0.412862 | 3_2:-82354910 | Msa0430480:CDS |
| AACAGCGTGGAGCCTAGTTT+AGG | 0.414590 | 3_2:-82355230 | Msa0430480:CDS |
| TTTATTTATTTATTTATTGG+TGG | 0.418549 | 3_2:+82356342 | None:intergenic |
| TTATTTATTTATTTATTGGT+GGG | 0.425795 | 3_2:+82356343 | None:intergenic |
| GAATCCTGAGATGGGCCTAT+AGG | 0.426399 | 3_2:-82354620 | Msa0430480:three_prime_UTR |
| GATCTCTGCTGTGGTCCTAT+AGG | 0.429582 | 3_2:+82354605 | None:intergenic |
| ATTGAAAGATCATCTTTGTT+GGG | 0.438979 | 3_2:-82355459 | Msa0430480:CDS |
| ATTGGAAAAGCTAGCTATAG+AGG | 0.441961 | 3_2:+82356274 | None:intergenic |
| AATGCAACAAACGCAAGTTT+GGG | 0.445846 | 3_2:-82354979 | Msa0430480:CDS |
| AGAAGCTGATGTTGAAACTA+TGG | 0.448803 | 3_2:-82355024 | Msa0430480:CDS |
| TTTAGATGTATCATATAAAG+TGG | 0.455994 | 3_2:+82354456 | None:intergenic |
| GTTTCAAGAAAGATGTAAAG+TGG | 0.463002 | 3_2:+82355939 | None:intergenic |
| ATGAGTTAGAGTTTGAGTTT+GGG | 0.468379 | 3_2:-82356082 | Msa0430480:CDS |
| ATGGCTTCTCATTCTGAAAA+CGG | 0.471458 | 3_2:+82355787 | None:intergenic |
| TTCATGATTGATAACTGGTT+TGG | 0.472099 | 3_2:+82354654 | None:intergenic |
| AAGTAGTCCAAAAGGTGTAA+TGG | 0.473331 | 3_2:-82354948 | Msa0430480:CDS |
| CTCGAAGAGAATCTATTGAA+TGG | 0.475440 | 3_2:-82355896 | Msa0430480:CDS |
| TGATATTCATCTCCTAAACT+AGG | 0.476214 | 3_2:+82355218 | None:intergenic |
| TTCCAAGAATACCAAGAAGC+TGG | 0.476633 | 3_2:+82355192 | None:intergenic |
| AACGTATCCAAAAGTAACAT+TGG | 0.480126 | 3_2:+82356137 | None:intergenic |
| AGCTATAGAGGGAGAGGAGA+AGG | 0.481015 | 3_2:+82356286 | None:intergenic |
| TGCTATAGCCCATGAATCAT+TGG | 0.482213 | 3_2:+82354901 | None:intergenic |
| ACTTGAAGATCTAGCAAAAG+AGG | 0.483959 | 3_2:+82355699 | None:intergenic |
| CTGATGTTGAAACTATGGTC+AGG | 0.487634 | 3_2:-82355019 | Msa0430480:CDS |
| TGTATCATATAAAGTGGAAG+TGG | 0.501083 | 3_2:+82354462 | None:intergenic |
| TGGTCCTATAGGCCCATCTC+AGG | 0.502257 | 3_2:+82354616 | None:intergenic |
| TTTCAAGAAAGATGTAAAGT+GGG | 0.508769 | 3_2:+82355940 | None:intergenic |
| ATGACTATCTCTGATGCCTA+TGG | 0.508989 | 3_2:-82354680 | Msa0430480:three_prime_UTR |
| GTTCTGATCTTCTTAGACAA+AGG | 0.512885 | 3_2:+82354848 | None:intergenic |
| ACGTATCCAAAAGTAACATT+GGG | 0.515111 | 3_2:+82356138 | None:intergenic |
| GTACTGTTCAGAAGAACATT+GGG | 0.522194 | 3_2:-82356114 | Msa0430480:CDS |
| ACAAAATCAATAAAAGAAAG+AGG | 0.523440 | 3_2:+82355497 | None:intergenic |
| TGATAATTCCAATGATTCAT+GGG | 0.525327 | 3_2:-82354909 | Msa0430480:CDS |
| TCAATTCCAAGTAGTCCAAA+AGG | 0.525691 | 3_2:-82354956 | Msa0430480:CDS |
| ATCTTCTTAGACAAAGGCTC+TGG | 0.533638 | 3_2:+82354854 | None:intergenic |
| TGTACTGTTCAGAAGAACAT+TGG | 0.536203 | 3_2:-82356115 | Msa0430480:CDS |
| TGATACTTTCAACTCTTGGA+TGG | 0.538072 | 3_2:-82355538 | Msa0430480:CDS |
| AAAGCTAGCTATAGAGGGAG+AGG | 0.538868 | 3_2:+82356280 | None:intergenic |
| AGCAGTTTCCAAAACAGGGT+TGG | 0.546697 | 3_2:+82355917 | None:intergenic |
| GAGTTTCTTAAGAGATGTGA+AGG | 0.552834 | 3_2:-82355437 | Msa0430480:CDS |
| TTCGAGCAGTTTCCAAAACA+GGG | 0.563113 | 3_2:+82355913 | None:intergenic |
| CTCATCTCATATATCTAACA+TGG | 0.566897 | 3_2:-82356177 | Msa0430480:exon |
| ACTATCCATGAATCCTGAGA+TGG | 0.568095 | 3_2:-82354629 | Msa0430480:three_prime_UTR |
| ATCTAGCAAAAGAGGAACAT+GGG | 0.578857 | 3_2:+82355707 | None:intergenic |
| ATAACTGGTTTGGTGACCAT+AGG | 0.580281 | 3_2:+82354664 | None:intergenic |
| CTATGGTCAGGGTATGAAGA+GGG | 0.582499 | 3_2:-82355007 | Msa0430480:CDS |
| GATCTAGCAAAAGAGGAACA+TGG | 0.582627 | 3_2:+82355706 | None:intergenic |
| CTATCCATGAATCCTGAGAT+GGG | 0.584232 | 3_2:-82354628 | Msa0430480:three_prime_UTR |
| GTAGCAGTTGCCAAAACAGA+AGG | 0.597534 | 3_2:+82355269 | None:intergenic |
| TTGGAAAAGCTAGCTATAGA+GGG | 0.600856 | 3_2:+82356275 | None:intergenic |
| GCTGCAAGCTGAGTCATCCA+TGG | 0.601969 | 3_2:+82355768 | None:intergenic |
| TTCTAACAAAGAACAAGTAG+TGG | 0.615213 | 3_2:+82356022 | None:intergenic |
| AGGACCACAGCAGAGATCGT+TGG | 0.616799 | 3_2:-82354600 | Msa0430480:three_prime_UTR |
| TGATGTTGAAACTATGGTCA+GGG | 0.619871 | 3_2:-82355018 | Msa0430480:CDS |
| TTCATCGTCCCAAAACATGT+CGG | 0.630209 | 3_2:+82355998 | None:intergenic |
| CTGTTCAGAAGAACATTGGG+AGG | 0.651953 | 3_2:-82356111 | Msa0430480:CDS |
| AATGCCAACGATCTCTGCTG+TGG | 0.662412 | 3_2:+82354596 | None:intergenic |
| ACTATGGTCAGGGTATGAAG+AGG | 0.670130 | 3_2:-82355008 | Msa0430480:CDS |
| TATGGTCAGGGTATGAAGAG+GGG | 0.674081 | 3_2:-82355006 | Msa0430480:CDS |
| ATAATGGTTACAGGACAAGG+TGG | 0.720472 | 3_2:-82355056 | Msa0430480:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTATTTATTTATTGGT+GGG | + | chr3_2:82354452-82354471 | None:intergenic | 10.0% |
| !! | TTTATTTATTTATTTATTGG+TGG | + | chr3_2:82354453-82354472 | None:intergenic | 10.0% |
| !! | TTATTTATTTATTTATTGGT+GGG | + | chr3_2:82354452-82354471 | None:intergenic | 10.0% |
| !! | TTTATTTATTTATTTATTGG+TGG | + | chr3_2:82354453-82354472 | None:intergenic | 10.0% |
| !!! | TTGTTTTTGAAATTTTGTTT+AGG | - | chr3_2:82355177-82355196 | Msa0430480:intron | 15.0% |
| !! | TTAATATTAATGTGGAATAA+TGG | - | chr3_2:82355720-82355739 | Msa0430480:CDS | 15.0% |
| !!! | TTTTTTTGCATAATGAAATA+GGG | + | chr3_2:82356026-82356045 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGCATAATGAAAT+AGG | + | chr3_2:82356027-82356046 | None:intergenic | 15.0% |
| !! | AATAAATACACTAATTGATA+TGG | + | chr3_2:82356283-82356302 | None:intergenic | 15.0% |
| !!! | TTGTTTTTGAAATTTTGTTT+AGG | - | chr3_2:82355177-82355196 | Msa0430480:intron | 15.0% |
| !! | TTAATATTAATGTGGAATAA+TGG | - | chr3_2:82355720-82355739 | Msa0430480:CDS | 15.0% |
| !!! | TTTTTTTGCATAATGAAATA+GGG | + | chr3_2:82356026-82356045 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGCATAATGAAAT+AGG | + | chr3_2:82356027-82356046 | None:intergenic | 15.0% |
| !! | AATAAATACACTAATTGATA+TGG | + | chr3_2:82356283-82356302 | None:intergenic | 15.0% |
| !! | ACAAAATCAATAAAAGAAAG+AGG | + | chr3_2:82355298-82355317 | None:intergenic | 20.0% |
| !!! | ATGAAGTATTTTTCTTTTTG+AGG | - | chr3_2:82356071-82356090 | Msa0430480:CDS | 20.0% |
| !!! | TGAAGTATTTTTCTTTTTGA+GGG | - | chr3_2:82356072-82356091 | Msa0430480:CDS | 20.0% |
| !! | TTTAGATGTATCATATAAAG+TGG | + | chr3_2:82356339-82356358 | None:intergenic | 20.0% |
| !! | ACAAAATCAATAAAAGAAAG+AGG | + | chr3_2:82355298-82355317 | None:intergenic | 20.0% |
| !!! | ATGAAGTATTTTTCTTTTTG+AGG | - | chr3_2:82356071-82356090 | Msa0430480:CDS | 20.0% |
| !!! | TGAAGTATTTTTCTTTTTGA+GGG | - | chr3_2:82356072-82356091 | Msa0430480:CDS | 20.0% |
| !! | TTTAGATGTATCATATAAAG+TGG | + | chr3_2:82356339-82356358 | None:intergenic | 20.0% |
| ! | TTCTCTTTATTGAGACAAAT+TGG | + | chr3_2:82354539-82354558 | None:intergenic | 25.0% |
| !!! | GTTTATTGTTGTGTTGTTTA+AGG | + | chr3_2:82354749-82354768 | None:intergenic | 25.0% |
| ! | TTTCAAGAAAGATGTAAAGT+GGG | + | chr3_2:82354855-82354874 | None:intergenic | 25.0% |
| !!! | ATTTTGATACTTTCAACTCT+TGG | - | chr3_2:82355250-82355269 | Msa0430480:CDS | 25.0% |
| ! | ATTGAAAGATCATCTTTGTT+GGG | - | chr3_2:82355333-82355352 | Msa0430480:intron | 25.0% |
| ! | TACTTCTATAGTTGAAACTA+TGG | - | chr3_2:82355687-82355706 | Msa0430480:intron | 25.0% |
| ! | TGATAATTCCAATGATTCAT+GGG | - | chr3_2:82355883-82355902 | Msa0430480:CDS | 25.0% |
| ! | ATGAAGAGTTTAATAGAAAC+TGG | + | chr3_2:82355976-82355995 | None:intergenic | 25.0% |
| ! | TTCTCTTTATTGAGACAAAT+TGG | + | chr3_2:82354539-82354558 | None:intergenic | 25.0% |
| !!! | GTTTATTGTTGTGTTGTTTA+AGG | + | chr3_2:82354749-82354768 | None:intergenic | 25.0% |
| ! | TTTCAAGAAAGATGTAAAGT+GGG | + | chr3_2:82354855-82354874 | None:intergenic | 25.0% |
| !!! | ATTTTGATACTTTCAACTCT+TGG | - | chr3_2:82355250-82355269 | Msa0430480:CDS | 25.0% |
| ! | ATTGAAAGATCATCTTTGTT+GGG | - | chr3_2:82355333-82355352 | Msa0430480:intron | 25.0% |
| ! | TACTTCTATAGTTGAAACTA+TGG | - | chr3_2:82355687-82355706 | Msa0430480:intron | 25.0% |
| ! | TGATAATTCCAATGATTCAT+GGG | - | chr3_2:82355883-82355902 | Msa0430480:CDS | 25.0% |
| ! | ATGAAGAGTTTAATAGAAAC+TGG | + | chr3_2:82355976-82355995 | None:intergenic | 25.0% |
| ! | GAAGCATTATGCTCTTATTA+TGG | - | chr3_2:82354556-82354575 | Msa0430480:three_prime_UTR | 30.0% |
| CTCATCTCATATATCTAACA+TGG | - | chr3_2:82354615-82354634 | Msa0430480:three_prime_UTR | 30.0% | |
| !!! | CTATAACCCAATGTTACTTT+TGG | - | chr3_2:82354648-82354667 | Msa0430480:three_prime_UTR | 30.0% |
| ACGTATCCAAAAGTAACATT+GGG | + | chr3_2:82354657-82354676 | None:intergenic | 30.0% | |
| AACGTATCCAAAAGTAACAT+TGG | + | chr3_2:82354658-82354677 | None:intergenic | 30.0% | |
| ! | ATGAGTTAGAGTTTGAGTTT+GGG | - | chr3_2:82354710-82354729 | Msa0430480:three_prime_UTR | 30.0% |
| TTCTAACAAAGAACAAGTAG+TGG | + | chr3_2:82354773-82354792 | None:intergenic | 30.0% | |
| GTTTCAAGAAAGATGTAAAG+TGG | + | chr3_2:82354856-82354875 | None:intergenic | 30.0% | |
| !! | TTTTGTTTCTTTCAAGAGCT+AGG | + | chr3_2:82355128-82355147 | None:intergenic | 30.0% |
| AGCAAAGACGATTAAAAAGA+TGG | - | chr3_2:82355225-82355244 | Msa0430480:CDS | 30.0% | |
| ! | GATTTTGTCATAAGAAGACT+TGG | - | chr3_2:82355310-82355329 | Msa0430480:intron | 30.0% |
| GATTGAAAGATCATCTTTGT+TGG | - | chr3_2:82355332-82355351 | Msa0430480:intron | 30.0% | |
| TGATATTCATCTCCTAAACT+AGG | + | chr3_2:82355577-82355596 | None:intergenic | 30.0% | |
| TAATGTGGAATAATGGTTAC+AGG | - | chr3_2:82355727-82355746 | Msa0430480:CDS | 30.0% | |
| GTGATAATTCCAATGATTCA+TGG | - | chr3_2:82355882-82355901 | Msa0430480:CDS | 30.0% | |
| !! | ATTTTTCTTTTTGAGGGACA+AGG | - | chr3_2:82356078-82356097 | Msa0430480:CDS | 30.0% |
| ! | TTCATGATTGATAACTGGTT+TGG | + | chr3_2:82356141-82356160 | None:intergenic | 30.0% |
| ! | AGTCTTTCATGATTGATAAC+TGG | + | chr3_2:82356146-82356165 | None:intergenic | 30.0% |
| ! | AAAGTGGAAGTGGATTTATT+TGG | + | chr3_2:82356323-82356342 | None:intergenic | 30.0% |
| TGTATCATATAAAGTGGAAG+TGG | + | chr3_2:82356333-82356352 | None:intergenic | 30.0% | |
| ! | GAAGCATTATGCTCTTATTA+TGG | - | chr3_2:82354556-82354575 | Msa0430480:three_prime_UTR | 30.0% |
| CTCATCTCATATATCTAACA+TGG | - | chr3_2:82354615-82354634 | Msa0430480:three_prime_UTR | 30.0% | |
| !!! | CTATAACCCAATGTTACTTT+TGG | - | chr3_2:82354648-82354667 | Msa0430480:three_prime_UTR | 30.0% |
| ACGTATCCAAAAGTAACATT+GGG | + | chr3_2:82354657-82354676 | None:intergenic | 30.0% | |
| AACGTATCCAAAAGTAACAT+TGG | + | chr3_2:82354658-82354677 | None:intergenic | 30.0% | |
| ! | ATGAGTTAGAGTTTGAGTTT+GGG | - | chr3_2:82354710-82354729 | Msa0430480:three_prime_UTR | 30.0% |
| TTCTAACAAAGAACAAGTAG+TGG | + | chr3_2:82354773-82354792 | None:intergenic | 30.0% | |
| GTTTCAAGAAAGATGTAAAG+TGG | + | chr3_2:82354856-82354875 | None:intergenic | 30.0% | |
| !! | TTTTGTTTCTTTCAAGAGCT+AGG | + | chr3_2:82355128-82355147 | None:intergenic | 30.0% |
| AGCAAAGACGATTAAAAAGA+TGG | - | chr3_2:82355225-82355244 | Msa0430480:CDS | 30.0% | |
| ! | GATTTTGTCATAAGAAGACT+TGG | - | chr3_2:82355310-82355329 | Msa0430480:intron | 30.0% |
| GATTGAAAGATCATCTTTGT+TGG | - | chr3_2:82355332-82355351 | Msa0430480:intron | 30.0% | |
| TGATATTCATCTCCTAAACT+AGG | + | chr3_2:82355577-82355596 | None:intergenic | 30.0% | |
| TAATGTGGAATAATGGTTAC+AGG | - | chr3_2:82355727-82355746 | Msa0430480:CDS | 30.0% | |
| GTGATAATTCCAATGATTCA+TGG | - | chr3_2:82355882-82355901 | Msa0430480:CDS | 30.0% | |
| !! | ATTTTTCTTTTTGAGGGACA+AGG | - | chr3_2:82356078-82356097 | Msa0430480:CDS | 30.0% |
| ! | TTCATGATTGATAACTGGTT+TGG | + | chr3_2:82356141-82356160 | None:intergenic | 30.0% |
| ! | AGTCTTTCATGATTGATAAC+TGG | + | chr3_2:82356146-82356165 | None:intergenic | 30.0% |
| ! | AAAGTGGAAGTGGATTTATT+TGG | + | chr3_2:82356323-82356342 | None:intergenic | 30.0% |
| TGTATCATATAAAGTGGAAG+TGG | + | chr3_2:82356333-82356352 | None:intergenic | 30.0% | |
| TTGGAAAAGCTAGCTATAGA+GGG | + | chr3_2:82354520-82354539 | None:intergenic | 35.0% | |
| ATTGGAAAAGCTAGCTATAG+AGG | + | chr3_2:82354521-82354540 | None:intergenic | 35.0% | |
| TGTACTGTTCAGAAGAACAT+TGG | - | chr3_2:82354677-82354696 | Msa0430480:three_prime_UTR | 35.0% | |
| GTACTGTTCAGAAGAACATT+GGG | - | chr3_2:82354678-82354697 | Msa0430480:three_prime_UTR | 35.0% | |
| ! | GATGAGTTAGAGTTTGAGTT+TGG | - | chr3_2:82354709-82354728 | Msa0430480:three_prime_UTR | 35.0% |
| ! | TGTTAGAAACCGACATGTTT+TGG | - | chr3_2:82354785-82354804 | Msa0430480:three_prime_UTR | 35.0% |
| ! | GTTAGAAACCGACATGTTTT+GGG | - | chr3_2:82354786-82354805 | Msa0430480:three_prime_UTR | 35.0% |
| CTCGAAGAGAATCTATTGAA+TGG | - | chr3_2:82354896-82354915 | Msa0430480:CDS | 35.0% | |
| TTGCTGTCAACTATCTTGAT+AGG | - | chr3_2:82354968-82354987 | Msa0430480:CDS | 35.0% | |
| ! | ATGGCTTCTCATTCTGAAAA+CGG | + | chr3_2:82355008-82355027 | None:intergenic | 35.0% |
| TCTTTCTCTTGCTGCTAAAA+TGG | - | chr3_2:82355056-82355075 | Msa0430480:intron | 35.0% | |
| ATCTAGCAAAAGAGGAACAT+GGG | + | chr3_2:82355088-82355107 | None:intergenic | 35.0% | |
| ACTTGAAGATCTAGCAAAAG+AGG | + | chr3_2:82355096-82355115 | None:intergenic | 35.0% | |
| TGATACTTTCAACTCTTGGA+TGG | - | chr3_2:82355254-82355273 | Msa0430480:CDS | 35.0% | |
| !! | ATAAAAGAAAGAGGTGTTGC+TGG | + | chr3_2:82355289-82355308 | None:intergenic | 35.0% |
| GAGTTTCTTAAGAGATGTGA+AGG | - | chr3_2:82355355-82355374 | Msa0430480:intron | 35.0% | |
| ! | GAGTTATCTACCTTCTGTTT+TGG | - | chr3_2:82355513-82355532 | Msa0430480:CDS | 35.0% |
| GAATATCAAATCCAGCTTCT+TGG | - | chr3_2:82355589-82355608 | Msa0430480:CDS | 35.0% | |
| AGAAGCTGATGTTGAAACTA+TGG | - | chr3_2:82355768-82355787 | Msa0430480:CDS | 35.0% | |
| TGATGTTGAAACTATGGTCA+GGG | - | chr3_2:82355774-82355793 | Msa0430480:CDS | 35.0% | |
| AATGCAACAAACGCAAGTTT+GGG | - | chr3_2:82355813-82355832 | Msa0430480:CDS | 35.0% | |
| TCAATTCCAAGTAGTCCAAA+AGG | - | chr3_2:82355836-82355855 | Msa0430480:CDS | 35.0% | |
| ! | ATTACACCTTTTGGACTACT+TGG | + | chr3_2:82355845-82355864 | None:intergenic | 35.0% |
| ! | AAGTAGTCCAAAAGGTGTAA+TGG | - | chr3_2:82355844-82355863 | Msa0430480:CDS | 35.0% |
| ! | GACATTTCCATTACACCTTT+TGG | + | chr3_2:82355854-82355873 | None:intergenic | 35.0% |
| GTTCTGATCTTCTTAGACAA+AGG | + | chr3_2:82355947-82355966 | None:intergenic | 35.0% | |
| TTGGAAAAGCTAGCTATAGA+GGG | + | chr3_2:82354520-82354539 | None:intergenic | 35.0% | |
| ATTGGAAAAGCTAGCTATAG+AGG | + | chr3_2:82354521-82354540 | None:intergenic | 35.0% | |
| TGTACTGTTCAGAAGAACAT+TGG | - | chr3_2:82354677-82354696 | Msa0430480:three_prime_UTR | 35.0% | |
| GTACTGTTCAGAAGAACATT+GGG | - | chr3_2:82354678-82354697 | Msa0430480:three_prime_UTR | 35.0% | |
| ! | GATGAGTTAGAGTTTGAGTT+TGG | - | chr3_2:82354709-82354728 | Msa0430480:three_prime_UTR | 35.0% |
| ! | TGTTAGAAACCGACATGTTT+TGG | - | chr3_2:82354785-82354804 | Msa0430480:three_prime_UTR | 35.0% |
| ! | GTTAGAAACCGACATGTTTT+GGG | - | chr3_2:82354786-82354805 | Msa0430480:three_prime_UTR | 35.0% |
| CTCGAAGAGAATCTATTGAA+TGG | - | chr3_2:82354896-82354915 | Msa0430480:CDS | 35.0% | |
| TTGCTGTCAACTATCTTGAT+AGG | - | chr3_2:82354968-82354987 | Msa0430480:CDS | 35.0% | |
| ! | ATGGCTTCTCATTCTGAAAA+CGG | + | chr3_2:82355008-82355027 | None:intergenic | 35.0% |
| TCTTTCTCTTGCTGCTAAAA+TGG | - | chr3_2:82355056-82355075 | Msa0430480:intron | 35.0% | |
| ATCTAGCAAAAGAGGAACAT+GGG | + | chr3_2:82355088-82355107 | None:intergenic | 35.0% | |
| ACTTGAAGATCTAGCAAAAG+AGG | + | chr3_2:82355096-82355115 | None:intergenic | 35.0% | |
| TGATACTTTCAACTCTTGGA+TGG | - | chr3_2:82355254-82355273 | Msa0430480:CDS | 35.0% | |
| !! | ATAAAAGAAAGAGGTGTTGC+TGG | + | chr3_2:82355289-82355308 | None:intergenic | 35.0% |
| GAGTTTCTTAAGAGATGTGA+AGG | - | chr3_2:82355355-82355374 | Msa0430480:intron | 35.0% | |
| ! | GAGTTATCTACCTTCTGTTT+TGG | - | chr3_2:82355513-82355532 | Msa0430480:CDS | 35.0% |
| GAATATCAAATCCAGCTTCT+TGG | - | chr3_2:82355589-82355608 | Msa0430480:CDS | 35.0% | |
| AGAAGCTGATGTTGAAACTA+TGG | - | chr3_2:82355768-82355787 | Msa0430480:CDS | 35.0% | |
| TGATGTTGAAACTATGGTCA+GGG | - | chr3_2:82355774-82355793 | Msa0430480:CDS | 35.0% | |
| AATGCAACAAACGCAAGTTT+GGG | - | chr3_2:82355813-82355832 | Msa0430480:CDS | 35.0% | |
| TCAATTCCAAGTAGTCCAAA+AGG | - | chr3_2:82355836-82355855 | Msa0430480:CDS | 35.0% | |
| ! | ATTACACCTTTTGGACTACT+TGG | + | chr3_2:82355845-82355864 | None:intergenic | 35.0% |
| ! | AAGTAGTCCAAAAGGTGTAA+TGG | - | chr3_2:82355844-82355863 | Msa0430480:CDS | 35.0% |
| ! | GACATTTCCATTACACCTTT+TGG | + | chr3_2:82355854-82355873 | None:intergenic | 35.0% |
| GTTCTGATCTTCTTAGACAA+AGG | + | chr3_2:82355947-82355966 | None:intergenic | 35.0% | |
| TTCATCGTCCCAAAACATGT+CGG | + | chr3_2:82354797-82354816 | None:intergenic | 40.0% | |
| ! | TCTTGAAACCAACCCTGTTT+TGG | - | chr3_2:82354867-82354886 | Msa0430480:CDS | 40.0% |
| TTCGAGCAGTTTCCAAAACA+GGG | + | chr3_2:82354882-82354901 | None:intergenic | 40.0% | |
| ! | GTTTTCAGAATGAGAAGCCA+TGG | - | chr3_2:82355007-82355026 | Msa0430480:CDS | 40.0% |
| GATCTAGCAAAAGAGGAACA+TGG | + | chr3_2:82355089-82355108 | None:intergenic | 40.0% | |
| CTTCTCTCTGTCATTAGATC+AGG | - | chr3_2:82355382-82355401 | Msa0430480:intron | 40.0% | |
| !!! | TGTTTTGGCAACTGCTACAA+TGG | - | chr3_2:82355528-82355547 | Msa0430480:CDS | 40.0% |
| ATCCAGCTTCTTGGTATTCT+TGG | - | chr3_2:82355598-82355617 | Msa0430480:intron | 40.0% | |
| TTCCAAGAATACCAAGAAGC+TGG | + | chr3_2:82355603-82355622 | None:intergenic | 40.0% | |
| GGAATAATGGTTACAGGACA+AGG | - | chr3_2:82355733-82355752 | Msa0430480:CDS | 40.0% | |
| ATAATGGTTACAGGACAAGG+TGG | - | chr3_2:82355736-82355755 | Msa0430480:CDS | 40.0% | |
| CTGATGTTGAAACTATGGTC+AGG | - | chr3_2:82355773-82355792 | Msa0430480:CDS | 40.0% | |
| CAATGCAACAAACGCAAGTT+TGG | - | chr3_2:82355812-82355831 | Msa0430480:CDS | 40.0% | |
| TGCTATAGCCCATGAATCAT+TGG | + | chr3_2:82355894-82355913 | None:intergenic | 40.0% | |
| ATCTTCTTAGACAAAGGCTC+TGG | + | chr3_2:82355941-82355960 | None:intergenic | 40.0% | |
| ATGACTATCTCTGATGCCTA+TGG | - | chr3_2:82356112-82356131 | Msa0430480:CDS | 40.0% | |
| !! | ATAACTGGTTTGGTGACCAT+AGG | + | chr3_2:82356131-82356150 | None:intergenic | 40.0% |
| ACTATCCATGAATCCTGAGA+TGG | - | chr3_2:82356163-82356182 | Msa0430480:exon | 40.0% | |
| CTATCCATGAATCCTGAGAT+GGG | - | chr3_2:82356164-82356183 | Msa0430480:exon | 40.0% | |
| ! | GAGATCGTTGGCATTTTATG+AGG | - | chr3_2:82356204-82356223 | Msa0430480:five_prime_UTR | 40.0% |
| TTCATCGTCCCAAAACATGT+CGG | + | chr3_2:82354797-82354816 | None:intergenic | 40.0% | |
| ! | TCTTGAAACCAACCCTGTTT+TGG | - | chr3_2:82354867-82354886 | Msa0430480:CDS | 40.0% |
| TTCGAGCAGTTTCCAAAACA+GGG | + | chr3_2:82354882-82354901 | None:intergenic | 40.0% | |
| ! | GTTTTCAGAATGAGAAGCCA+TGG | - | chr3_2:82355007-82355026 | Msa0430480:CDS | 40.0% |
| GATCTAGCAAAAGAGGAACA+TGG | + | chr3_2:82355089-82355108 | None:intergenic | 40.0% | |
| CTTCTCTCTGTCATTAGATC+AGG | - | chr3_2:82355382-82355401 | Msa0430480:intron | 40.0% | |
| !!! | TGTTTTGGCAACTGCTACAA+TGG | - | chr3_2:82355528-82355547 | Msa0430480:CDS | 40.0% |
| ATCCAGCTTCTTGGTATTCT+TGG | - | chr3_2:82355598-82355617 | Msa0430480:intron | 40.0% | |
| TTCCAAGAATACCAAGAAGC+TGG | + | chr3_2:82355603-82355622 | None:intergenic | 40.0% | |
| GGAATAATGGTTACAGGACA+AGG | - | chr3_2:82355733-82355752 | Msa0430480:CDS | 40.0% | |
| ATAATGGTTACAGGACAAGG+TGG | - | chr3_2:82355736-82355755 | Msa0430480:CDS | 40.0% | |
| CTGATGTTGAAACTATGGTC+AGG | - | chr3_2:82355773-82355792 | Msa0430480:CDS | 40.0% | |
| CAATGCAACAAACGCAAGTT+TGG | - | chr3_2:82355812-82355831 | Msa0430480:CDS | 40.0% | |
| TGCTATAGCCCATGAATCAT+TGG | + | chr3_2:82355894-82355913 | None:intergenic | 40.0% | |
| ATCTTCTTAGACAAAGGCTC+TGG | + | chr3_2:82355941-82355960 | None:intergenic | 40.0% | |
| ATGACTATCTCTGATGCCTA+TGG | - | chr3_2:82356112-82356131 | Msa0430480:CDS | 40.0% | |
| !! | ATAACTGGTTTGGTGACCAT+AGG | + | chr3_2:82356131-82356150 | None:intergenic | 40.0% |
| ACTATCCATGAATCCTGAGA+TGG | - | chr3_2:82356163-82356182 | Msa0430480:exon | 40.0% | |
| CTATCCATGAATCCTGAGAT+GGG | - | chr3_2:82356164-82356183 | Msa0430480:exon | 40.0% | |
| ! | GAGATCGTTGGCATTTTATG+AGG | - | chr3_2:82356204-82356223 | Msa0430480:five_prime_UTR | 40.0% |
| AAAGCTAGCTATAGAGGGAG+AGG | + | chr3_2:82354515-82354534 | None:intergenic | 45.0% | |
| CTGTTCAGAAGAACATTGGG+AGG | - | chr3_2:82354681-82354700 | Msa0430480:three_prime_UTR | 45.0% | |
| AGCAGTTTCCAAAACAGGGT+TGG | + | chr3_2:82354878-82354897 | None:intergenic | 45.0% | |
| CTTCGAGCAGTTTCCAAAAC+AGG | + | chr3_2:82354883-82354902 | None:intergenic | 45.0% | |
| GTAGCAGTTGCCAAAACAGA+AGG | + | chr3_2:82355526-82355545 | None:intergenic | 45.0% | |
| ! | GGTTCATGTTTTCAACAGCG+TGG | - | chr3_2:82355549-82355568 | Msa0430480:CDS | 45.0% |
| ACTATGGTCAGGGTATGAAG+AGG | - | chr3_2:82355784-82355803 | Msa0430480:CDS | 45.0% | |
| CTATGGTCAGGGTATGAAGA+GGG | - | chr3_2:82355785-82355804 | Msa0430480:CDS | 45.0% | |
| TATGGTCAGGGTATGAAGAG+GGG | - | chr3_2:82355786-82355805 | Msa0430480:CDS | 45.0% | |
| AAAGCTAGCTATAGAGGGAG+AGG | + | chr3_2:82354515-82354534 | None:intergenic | 45.0% | |
| CTGTTCAGAAGAACATTGGG+AGG | - | chr3_2:82354681-82354700 | Msa0430480:three_prime_UTR | 45.0% | |
| AGCAGTTTCCAAAACAGGGT+TGG | + | chr3_2:82354878-82354897 | None:intergenic | 45.0% | |
| CTTCGAGCAGTTTCCAAAAC+AGG | + | chr3_2:82354883-82354902 | None:intergenic | 45.0% | |
| GTAGCAGTTGCCAAAACAGA+AGG | + | chr3_2:82355526-82355545 | None:intergenic | 45.0% | |
| ! | GGTTCATGTTTTCAACAGCG+TGG | - | chr3_2:82355549-82355568 | Msa0430480:CDS | 45.0% |
| ACTATGGTCAGGGTATGAAG+AGG | - | chr3_2:82355784-82355803 | Msa0430480:CDS | 45.0% | |
| CTATGGTCAGGGTATGAAGA+GGG | - | chr3_2:82355785-82355804 | Msa0430480:CDS | 45.0% | |
| TATGGTCAGGGTATGAAGAG+GGG | - | chr3_2:82355786-82355805 | Msa0430480:CDS | 45.0% | |
| !!! | GTTTTTATTTATTTATTTAT+TGG | + | chr3_2:82354456-82354475 | None:intergenic | 5.0% |
| !! | TATTAATATTAATATTAATG+TGG | - | chr3_2:82355712-82355731 | Msa0430480:CDS | 5.0% |
| !!! | GTTTTTATTTATTTATTTAT+TGG | + | chr3_2:82354456-82354475 | None:intergenic | 5.0% |
| !! | TATTAATATTAATATTAATG+TGG | - | chr3_2:82355712-82355731 | Msa0430480:CDS | 5.0% |
| AGCTATAGAGGGAGAGGAGA+AGG | + | chr3_2:82354509-82354528 | None:intergenic | 50.0% | |
| AACAGCGTGGAGCCTAGTTT+AGG | - | chr3_2:82355562-82355581 | Msa0430480:CDS | 50.0% | |
| TAGGCCCATCTCAGGATTCA+TGG | + | chr3_2:82356171-82356190 | None:intergenic | 50.0% | |
| GAATCCTGAGATGGGCCTAT+AGG | - | chr3_2:82356172-82356191 | Msa0430480:exon | 50.0% | |
| GATCTCTGCTGTGGTCCTAT+AGG | + | chr3_2:82356190-82356209 | None:intergenic | 50.0% | |
| AATGCCAACGATCTCTGCTG+TGG | + | chr3_2:82356199-82356218 | None:intergenic | 50.0% | |
| AGCTATAGAGGGAGAGGAGA+AGG | + | chr3_2:82354509-82354528 | None:intergenic | 50.0% | |
| AACAGCGTGGAGCCTAGTTT+AGG | - | chr3_2:82355562-82355581 | Msa0430480:CDS | 50.0% | |
| TAGGCCCATCTCAGGATTCA+TGG | + | chr3_2:82356171-82356190 | None:intergenic | 50.0% | |
| GAATCCTGAGATGGGCCTAT+AGG | - | chr3_2:82356172-82356191 | Msa0430480:exon | 50.0% | |
| GATCTCTGCTGTGGTCCTAT+AGG | + | chr3_2:82356190-82356209 | None:intergenic | 50.0% | |
| AATGCCAACGATCTCTGCTG+TGG | + | chr3_2:82356199-82356218 | None:intergenic | 50.0% | |
| GCTGCAAGCTGAGTCATCCA+TGG | + | chr3_2:82355027-82355046 | None:intergenic | 55.0% | |
| TGGTCCTATAGGCCCATCTC+AGG | + | chr3_2:82356179-82356198 | None:intergenic | 55.0% | |
| AGGACCACAGCAGAGATCGT+TGG | - | chr3_2:82356192-82356211 | Msa0430480:five_prime_UTR | 55.0% | |
| GCTGCAAGCTGAGTCATCCA+TGG | + | chr3_2:82355027-82355046 | None:intergenic | 55.0% | |
| TGGTCCTATAGGCCCATCTC+AGG | + | chr3_2:82356179-82356198 | None:intergenic | 55.0% | |
| AGGACCACAGCAGAGATCGT+TGG | - | chr3_2:82356192-82356211 | Msa0430480:five_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 82354443 | 82356371 | 82354443 | ID=Msa0430480;Name=Msa0430480 |
| chr3_2 | mRNA | 82354443 | 82356371 | 82354443 | ID=Msa0430480-mRNA-1;Parent=Msa0430480;Name=Msa0430480-mRNA-1;_AED=0.08;_eAED=0.08;_QI=191|1|1|1|1|1|4|374|354 |
| chr3_2 | exon | 82354443 | 82355065 | 82354443 | ID=Msa0430480-mRNA-1:exon:22841;Parent=Msa0430480-mRNA-1 |
| chr3_2 | exon | 82355184 | 82355314 | 82355184 | ID=Msa0430480-mRNA-1:exon:22840;Parent=Msa0430480-mRNA-1 |
| chr3_2 | exon | 82355411 | 82355615 | 82355411 | ID=Msa0430480-mRNA-1:exon:22839;Parent=Msa0430480-mRNA-1 |
| chr3_2 | exon | 82355701 | 82356371 | 82355701 | ID=Msa0430480-mRNA-1:exon:22838;Parent=Msa0430480-mRNA-1 |
| chr3_2 | five_prime_UTR | 82356181 | 82356371 | 82356181 | ID=Msa0430480-mRNA-1:five_prime_utr;Parent=Msa0430480-mRNA-1 |
| chr3_2 | CDS | 82355701 | 82356180 | 82355701 | ID=Msa0430480-mRNA-1:cds;Parent=Msa0430480-mRNA-1 |
| chr3_2 | CDS | 82355411 | 82355615 | 82355411 | ID=Msa0430480-mRNA-1:cds;Parent=Msa0430480-mRNA-1 |
| chr3_2 | CDS | 82355184 | 82355314 | 82355184 | ID=Msa0430480-mRNA-1:cds;Parent=Msa0430480-mRNA-1 |
| chr3_2 | CDS | 82354817 | 82355065 | 82354817 | ID=Msa0430480-mRNA-1:cds;Parent=Msa0430480-mRNA-1 |
| chr3_2 | three_prime_UTR | 82354443 | 82354816 | 82354443 | ID=Msa0430480-mRNA-1:three_prime_utr;Parent=Msa0430480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
